View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12450_low_1 (Length: 619)

Name: NF12450_low_1
Description: NF12450
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12450_low_1
NF12450_low_1
[»] chr5 (30 HSPs)
chr5 (15-605)||(30899660-30900259)
chr5 (23-458)||(34842415-34842843)
chr5 (292-462)||(11181684-11181854)
chr5 (306-458)||(42127266-42127419)
chr5 (22-467)||(2630035-2630481)
chr5 (386-462)||(10281921-10281997)
chr5 (334-462)||(28832374-28832502)
chr5 (55-202)||(5610985-5611132)
chr5 (386-462)||(17003811-17003887)
chr5 (330-443)||(3651613-3651729)
chr5 (292-404)||(6741927-6742039)
chr5 (386-462)||(31300447-31300523)
chr5 (292-400)||(33030854-33030962)
chr5 (292-462)||(7160756-7160925)
chr5 (359-458)||(17464185-17464284)
chr5 (386-462)||(24553379-24553455)
chr5 (294-467)||(5611219-5611392)
chr5 (390-462)||(11916824-11916895)
chr5 (386-462)||(19588914-19588990)
chr5 (62-125)||(28537469-28537532)
chr5 (386-462)||(3880469-3880545)
chr5 (62-172)||(14520079-14520188)
chr5 (393-462)||(9353184-9353252)
chr5 (295-365)||(16452092-16452163)
chr5 (295-365)||(33831692-33831763)
chr5 (228-264)||(9020453-9020489)
chr5 (152-184)||(15464470-15464502)
chr5 (361-401)||(31336221-31336261)
chr5 (434-462)||(36932200-36932228)
chr5 (434-462)||(38219617-38219645)
[»] chr2 (46 HSPs)
chr2 (25-467)||(28770621-28771068)
chr2 (112-467)||(18674248-18674598)
chr2 (56-467)||(3277849-3278250)
chr2 (23-485)||(2869520-2869985)
chr2 (292-462)||(15903742-15903911)
chr2 (314-507)||(41586356-41586549)
chr2 (22-335)||(16388449-16388760)
chr2 (386-462)||(14698861-14698937)
chr2 (386-462)||(21630114-21630190)
chr2 (386-462)||(34389020-34389096)
chr2 (260-419)||(27139845-27140004)
chr2 (386-462)||(17865374-17865450)
chr2 (386-462)||(31056212-31056288)
chr2 (386-462)||(33528476-33528552)
chr2 (386-507)||(39483102-39483224)
chr2 (386-459)||(13569498-13569571)
chr2 (386-462)||(10707104-10707180)
chr2 (386-462)||(33118304-33118380)
chr2 (370-458)||(44732104-44732191)
chr2 (292-462)||(2837881-2838052)
chr2 (23-125)||(16388259-16388360)
chr2 (386-462)||(8040232-8040309)
chr2 (22-123)||(34393238-34393338)
chr2 (85-125)||(15904076-15904116)
chr2 (390-462)||(23078323-23078394)
chr2 (386-462)||(34682185-34682261)
chr2 (295-363)||(45726943-45727012)
chr2 (386-462)||(8390001-8390077)
chr2 (406-462)||(10445319-10445375)
chr2 (387-462)||(40015095-40015170)
chr2 (292-363)||(11151673-11151745)
chr2 (62-172)||(23078609-23078719)
chr2 (292-401)||(27149207-27149316)
chr2 (62-184)||(33528747-33528868)
chr2 (283-343)||(5077797-5077858)
chr2 (389-462)||(20522394-20522467)
chr2 (86-123)||(27149052-27149089)
chr2 (80-125)||(27149480-27149525)
chr2 (393-462)||(36757614-36757682)
chr2 (118-162)||(5699691-5699735)
chr2 (289-368)||(12632619-12632696)
chr2 (304-357)||(13121788-13121843)
chr2 (295-344)||(24398089-24398140)
chr2 (434-462)||(25409848-25409876)
chr2 (290-363)||(33162530-33162604)
chr2 (62-162)||(34388709-34388808)
[»] chr4 (37 HSPs)
chr4 (23-489)||(37781673-37782137)
chr4 (297-507)||(34670469-34670682)
chr4 (283-467)||(39593794-39593976)
chr4 (268-424)||(18912254-18912409)
chr4 (292-462)||(5112312-5112482)
chr4 (292-485)||(39774133-39774327)
chr4 (261-469)||(873363-873571)
chr4 (292-428)||(1983187-1983322)
chr4 (386-462)||(24333980-24334056)
chr4 (386-459)||(42599429-42599502)
chr4 (386-462)||(3793932-3794008)
chr4 (386-462)||(5269052-5269128)
chr4 (56-175)||(3677671-3677787)
chr4 (386-462)||(3777718-3777794)
chr4 (386-462)||(10047550-10047626)
chr4 (23-123)||(39593544-39593645)
chr4 (46-123)||(4956021-4956098)
chr4 (386-462)||(6743267-6743342)
chr4 (386-462)||(16623145-16623220)
chr4 (386-462)||(16628724-16628799)
chr4 (292-462)||(18377434-18377604)
chr4 (294-432)||(36175185-36175321)
chr4 (295-363)||(40632459-40632528)
chr4 (386-462)||(54867349-54867427)
chr4 (23-125)||(3991827-3991926)
chr4 (386-462)||(25861885-25861962)
chr4 (292-384)||(42234299-42234390)
chr4 (295-363)||(379394-379463)
chr4 (306-365)||(24969124-24969184)
chr4 (292-363)||(52467436-52467508)
chr4 (62-179)||(1983429-1983546)
chr4 (393-462)||(5396523-5396591)
chr4 (75-202)||(8114843-8114967)
chr4 (55-123)||(16420835-16420903)
chr4 (434-462)||(28468388-28468416)
chr4 (85-125)||(34496007-34496047)
chr4 (386-462)||(38152290-38152365)
[»] chr1 (50 HSPs)
chr1 (239-465)||(8281340-8281566)
chr1 (260-458)||(918336-918534)
chr1 (23-447)||(32736864-32737279)
chr1 (27-433)||(35109418-35109811)
chr1 (289-467)||(10997028-10997209)
chr1 (293-418)||(3019806-3019931)
chr1 (386-462)||(47102691-47102767)
chr1 (352-459)||(15864699-15864805)
chr1 (289-455)||(2210529-2210697)
chr1 (359-486)||(11031301-11031429)
chr1 (386-462)||(13598569-13598645)
chr1 (386-462)||(16124366-16124442)
chr1 (386-462)||(40816668-40816744)
chr1 (23-102)||(48591013-48591092)
chr1 (23-102)||(48600708-48600787)
chr1 (218-366)||(11032268-11032413)
chr1 (23-123)||(17345704-17345805)
chr1 (386-462)||(29651982-29652058)
chr1 (386-462)||(47703787-47703863)
chr1 (387-503)||(25116508-25116629)
chr1 (390-462)||(19073101-19073173)
chr1 (390-462)||(19120991-19121063)
chr1 (390-462)||(47098677-47098749)
chr1 (84-206)||(2210321-2210442)
chr1 (292-448)||(37918735-37918888)
chr1 (292-462)||(22819504-22819676)
chr1 (21-120)||(8281131-8281230)
chr1 (386-462)||(9476431-9476507)
chr1 (292-458)||(48382346-48382503)
chr1 (380-462)||(9022758-9022838)
chr1 (421-463)||(6354261-6354303)
chr1 (386-455)||(27104260-27104329)
chr1 (390-462)||(3281881-3281952)
chr1 (296-357)||(3460715-3460778)
chr1 (386-462)||(32889609-32889683)
chr1 (295-363)||(4552722-4552791)
chr1 (295-363)||(41360928-41360997)
chr1 (308-418)||(17345415-17345525)
chr1 (425-459)||(19933415-19933449)
chr1 (305-355)||(928071-928123)
chr1 (393-462)||(13604474-13604542)
chr1 (295-365)||(19754507-19754578)
chr1 (295-365)||(47255425-47255496)
chr1 (24-120)||(10996771-10996867)
chr1 (434-462)||(19358693-19358721)
chr1 (434-462)||(19361282-19361310)
chr1 (434-462)||(19366158-19366186)
chr1 (434-462)||(19379922-19379950)
chr1 (390-462)||(26644750-26644821)
chr1 (108-184)||(47704062-47704138)
[»] scaffold0016 (1 HSPs)
scaffold0016 (284-467)||(102341-102524)
[»] scaffold0002 (1 HSPs)
scaffold0002 (272-467)||(14737-14932)
[»] chr7 (37 HSPs)
chr7 (292-462)||(5817122-5817292)
chr7 (62-367)||(28617172-28617475)
chr7 (306-462)||(23402865-23403022)
chr7 (306-507)||(2580478-2580680)
chr7 (306-462)||(20284177-20284334)
chr7 (386-462)||(29159974-29160050)
chr7 (296-452)||(4162629-4162786)
chr7 (325-458)||(45685601-45685734)
chr7 (386-462)||(56118-56194)
chr7 (386-462)||(4796520-4796596)
chr7 (386-462)||(9185026-9185102)
chr7 (386-462)||(9189859-9189935)
chr7 (386-458)||(49091832-49091904)
chr7 (326-452)||(3047364-3047489)
chr7 (386-462)||(46516157-46516233)
chr7 (23-125)||(5817459-5817559)
chr7 (306-462)||(9235434-9235591)
chr7 (389-462)||(33332302-33332375)
chr7 (268-460)||(761225-761416)
chr7 (23-122)||(8140922-8141022)
chr7 (386-462)||(35960986-35961062)
chr7 (386-460)||(2647551-2647625)
chr7 (127-197)||(31151265-31151335)
chr7 (127-197)||(31169553-31169623)
chr7 (361-426)||(23580804-23580868)
chr7 (62-184)||(2580237-2580358)
chr7 (306-355)||(22328487-22328538)
chr7 (295-365)||(41649096-41649166)
chr7 (192-381)||(22835585-22835772)
chr7 (23-125)||(27984294-27984399)
chr7 (295-365)||(2390294-2390365)
chr7 (393-462)||(21983463-21983531)
chr7 (434-462)||(2479553-2479581)
chr7 (62-184)||(9185289-9185410)
chr7 (434-462)||(18408981-18409009)
chr7 (434-462)||(21640027-21640055)
chr7 (434-462)||(21646225-21646253)
[»] chr8 (44 HSPs)
chr8 (260-458)||(33503697-33503896)
chr8 (292-462)||(7493025-7493195)
chr8 (292-403)||(9054748-9054859)
chr8 (330-467)||(31513180-31513314)
chr8 (292-462)||(3051195-3051365)
chr8 (305-462)||(28307649-28307807)
chr8 (294-459)||(14601240-14601405)
chr8 (291-408)||(34477128-34477242)
chr8 (292-419)||(5990456-5990583)
chr8 (386-462)||(19752246-19752321)
chr8 (289-467)||(8863476-8863649)
chr8 (386-462)||(4696460-4696536)
chr8 (386-462)||(6127392-6127468)
chr8 (386-462)||(26403081-26403157)
chr8 (283-341)||(11772007-11772065)
chr8 (292-375)||(6813758-6813842)
chr8 (354-446)||(24261916-24262008)
chr8 (297-458)||(37021017-37021182)
chr8 (386-462)||(5702332-5702409)
chr8 (386-462)||(23799428-23799504)
chr8 (49-146)||(5990725-5990819)
chr8 (23-125)||(7493252-7493352)
chr8 (23-125)||(14427727-14427830)
chr8 (294-382)||(32916477-32916566)
chr8 (361-445)||(6366649-6366733)
chr8 (390-462)||(19175606-19175677)
chr8 (23-125)||(13863940-13864043)
chr8 (295-363)||(19491784-19491853)
chr8 (83-146)||(28307432-28307495)
chr8 (294-403)||(28388061-28388171)
chr8 (292-363)||(30291620-30291693)
chr8 (292-342)||(18141854-18141906)
chr8 (417-458)||(34477068-34477109)
chr8 (295-365)||(42435076-42435147)
chr8 (306-363)||(1292559-1292617)
chr8 (434-462)||(4456245-4456273)
chr8 (434-462)||(7412557-7412585)
chr8 (56-123)||(7444620-7444688)
chr8 (434-462)||(13204635-13204663)
chr8 (434-462)||(26288109-26288137)
chr8 (434-462)||(26301366-26301394)
chr8 (434-462)||(26313360-26313388)
chr8 (434-462)||(31071079-31071107)
chr8 (306-363)||(40328793-40328851)
[»] chr3 (52 HSPs)
chr3 (24-197)||(34482012-34482185)
chr3 (291-458)||(41163092-41163259)
chr3 (386-462)||(3715843-3715919)
chr3 (292-507)||(5366115-5366336)
chr3 (55-202)||(21156272-21156419)
chr3 (260-462)||(40592623-40592826)
chr3 (289-451)||(44658345-44658508)
chr3 (289-427)||(29100232-29100371)
chr3 (306-462)||(3328198-3328355)
chr3 (292-460)||(21353637-21353806)
chr3 (386-462)||(1736145-1736221)
chr3 (386-462)||(8126799-8126875)
chr3 (386-462)||(18552726-18552802)
chr3 (386-462)||(47923745-47923821)
chr3 (386-462)||(48438385-48438461)
chr3 (386-461)||(25795949-25796024)
chr3 (386-507)||(1417286-1417408)
chr3 (386-462)||(3323532-3323608)
chr3 (260-368)||(4386863-4386971)
chr3 (271-383)||(5797194-5797305)
chr3 (386-462)||(30709630-30709706)
chr3 (386-462)||(35925648-35925723)
chr3 (386-462)||(36029263-36029338)
chr3 (386-462)||(47649739-47649815)
chr3 (380-507)||(25929191-25929320)
chr3 (294-467)||(21156506-21156679)
chr3 (83-368)||(25516851-25517133)
chr3 (63-184)||(48438065-48438185)
chr3 (386-462)||(21711392-21711467)
chr3 (386-462)||(24695007-24695083)
chr3 (57-172)||(27038135-27038249)
chr3 (306-365)||(9666562-9666623)
chr3 (386-462)||(8370330-8370405)
chr3 (390-462)||(16264523-16264594)
chr3 (387-462)||(26299157-26299233)
chr3 (390-462)||(39032395-39032466)
chr3 (64-123)||(4387107-4387166)
chr3 (295-363)||(30236139-30236208)
chr3 (295-363)||(46860488-46860557)
chr3 (434-485)||(6794532-6794584)
chr3 (62-172)||(27026795-27026904)
chr3 (386-428)||(40844819-40844861)
chr3 (393-462)||(27453137-27453205)
chr3 (393-462)||(27974793-27974861)
chr3 (393-462)||(27986297-27986365)
chr3 (393-462)||(33386516-33386584)
chr3 (152-189)||(44658591-44658628)
chr3 (434-462)||(1306167-1306195)
chr3 (506-546)||(8166722-8166762)
chr3 (423-455)||(10274588-10274620)
chr3 (434-462)||(32143540-32143568)
chr3 (152-184)||(33386783-33386815)
[»] chr6 (38 HSPs)
chr6 (51-467)||(1114949-1115359)
chr6 (306-467)||(99245-99405)
chr6 (386-507)||(24435778-24435899)
chr6 (23-467)||(33721406-33721842)
chr6 (260-445)||(30517998-30518182)
chr6 (293-454)||(33690685-33690846)
chr6 (306-462)||(31936665-31936820)
chr6 (327-462)||(14521783-14521919)
chr6 (390-462)||(21801196-21801268)
chr6 (386-462)||(5572095-5572170)
chr6 (386-462)||(18233016-18233091)
chr6 (386-462)||(31979682-31979757)
chr6 (359-548)||(30684015-30684211)
chr6 (23-125)||(31077140-31077240)
chr6 (294-400)||(31418929-31419035)
chr6 (51-120)||(98999-99068)
chr6 (386-463)||(31076787-31076864)
chr6 (23-206)||(30519125-30519307)
chr6 (112-206)||(9036160-9036253)
chr6 (62-123)||(27165552-27165614)
chr6 (60-197)||(30683731-30683868)
chr6 (386-459)||(4630123-4630195)
chr6 (386-455)||(10077027-10077096)
chr6 (291-332)||(20504932-20504973)
chr6 (387-427)||(5385765-5385805)
chr6 (295-363)||(2973024-2973093)
chr6 (23-123)||(28301166-28301265)
chr6 (23-123)||(28510808-28510907)
chr6 (291-420)||(21246994-21247124)
chr6 (82-196)||(21247212-21247325)
chr6 (433-462)||(21356253-21356282)
chr6 (307-365)||(26830220-26830279)
chr6 (434-462)||(5757330-5757358)
chr6 (108-172)||(22963595-22963659)
chr6 (434-462)||(22963916-22963944)
chr6 (434-462)||(23824449-23824477)
chr6 (108-172)||(23824734-23824798)
chr6 (386-462)||(31086326-31086401)
[»] scaffold0006 (3 HSPs)
scaffold0006 (386-462)||(5854-5930)
scaffold0006 (386-462)||(2663-2739)
scaffold0006 (393-462)||(133131-133199)
[»] scaffold0184 (1 HSPs)
scaffold0184 (64-125)||(29674-29735)
[»] scaffold0148 (2 HSPs)
scaffold0148 (386-462)||(10899-10976)
scaffold0148 (108-184)||(10624-10700)
[»] scaffold0078 (2 HSPs)
scaffold0078 (64-125)||(43109-43170)
scaffold0078 (326-462)||(23641-23777)
[»] scaffold0466 (1 HSPs)
scaffold0466 (295-365)||(7339-7410)
[»] scaffold0140 (2 HSPs)
scaffold0140 (393-462)||(8269-8337)
scaffold0140 (152-184)||(8546-8578)
[»] scaffold0098 (1 HSPs)
scaffold0098 (393-462)||(45375-45443)
[»] scaffold0087 (2 HSPs)
scaffold0087 (393-462)||(36684-36752)
scaffold0087 (393-462)||(43813-43881)
[»] scaffold0076 (2 HSPs)
scaffold0076 (51-96)||(16192-16237)
scaffold0076 (283-343)||(15959-16019)
[»] scaffold0176 (1 HSPs)
scaffold0176 (434-462)||(17468-17496)


Alignment Details
Target: chr5 (Bit Score: 431; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 431; E-Value: 0
Query Start/End: Original strand, 15 - 605
Target Start/End: Original strand, 30899660 - 30900259
Alignment:
Q  15 atagtctatgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaa 114  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  30899660 atagtctgtgttgtgaattcaaacaataaaacatatcaataaaacttagatgtgtggagctaaagaaatagtaatcaatgagcaaagtagcctcaagcaa 30899759  T
Q  115 c---aacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagat 211  Q
    |   |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30899760 caacaacaacaacacatagacctagatcaaagtgttaagcaacaccacaagtataaccaaaacaacaaagatacaaaagaagagaagaaaaacaatagat 30899859  T
Q  212 caatgtttgtttacgtagttcggtccaaaaaagacctacttt--ggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggtta 309  Q
    ||||||||||||||||||| |||||||||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30899860 caatgtttgtttacgtagtacggtccaaaaaagacctactctaggggagagagagagaagctctccgatctattatgagaagagtgatacaaagaggtta 30899959  T
Q  310 caagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaag 409  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  30899960 caagaaattagcctacaagctcacaaagaacaaactctattttctactgatttttcaagccactcaaacccacaaagaatcct-agagaaaacactaaag 30900058  T
Q  410 aaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgttccaactcaagataacctctcacaaaatacactcaaccc---- 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||        
T  30900059 aaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttataaatgttccaactcaagataacccctcacaaaatacactcaaccctaaa 30900158  T
Q  506 --tacctcattttatttaccaagtttctctctcttaaaactctct-nnnnnnngtgaagatgaagctttatatagagcctagatcgcgaggaatcgtgcc 602  Q
      |||||||||||||||||||||||  |||||||| |||||||||        |||||||||||||||||||||||||| |||||  |||||||||||||    
T  30900159 gttacctcattttatttaccaagtt--tctctcttgaaactctctaaaaaaaagtgaagatgaagctttatatagagccaagatcctgaggaatcgtgcc 30900256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 458
Target Start/End: Original strand, 34842415 - 34842843
Alignment:
Q  23 tgttgtgaattcgaacaataaaa-catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    ||||||||||| ||||||||||| || | ||||||| |||||||||||| || ||| ||| |||||||||| ||| |||||||||||||||| |||||||    
T  34842415 tgttgtgaattagaacaataaaatcacaccaataaa-cttagatgtgtggagtaaaggaagtagtaatcaa-gagtaaagtagcctcaagcagcaacaac 34842512  T
Q  122 aacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgt 221  Q
    || | | | ||||||||| |||||| ||| ||||||||||| ||| || || ||||||||||| |||||| | ||    |||||||  | | |  |||||    
T  34842513 aataaacaaacctagatctaagtgtgaagcaacaccacaagcatatccgaagcaacaaagataagaaagatgggag---aaacaatccaccgaaatttgt 34842609  T
Q  222 ttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagt 321  Q
    ||||  |||| ||   ||   |  ||||| || |||| ||||||| |||||||  ||| | ||||  | ||||||||||||||||||||||||  |||      
T  34842610 ttacccagtttggataaatttat-cctacatttgagg-gagagagcagctctctaatccactatgtaatgagtgatacaaagaggttacaagatgttatc 34842707  T
Q  322 ctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagctttttta 421  Q
     ||||||||||| ||||||| |  ||| |||||||  |||||||||| |||| |||||||||| |||| ||||||||| |||||||||||| | ||| ||    
T  34842708 ttacaagctcaccaagaacatatcctaatttctactcatttttcaagtcactaaaacccacaatgaattctaagagaacacactaaagaaaac-tttgta 34842806  T
Q  422 tccttcctctaatgaaatctcactacccaaggtgttt 458  Q
     |||||| ||||||| |||||||||||||||||||||    
T  34842807 accttcccctaatgagatctcactacccaaggtgttt 34842843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 11181854 - 11181684
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    |||||||||||   ||||||||||||||| ||| |||||| |||| ||||||   ||| |||||||| ||||| || | ||| || || ||||| |||||    
T  11181854 agtgatacaaatgagttacaagaaattagcctaaaagctctcaaatgaacaagacctaatttctacccatttt-catgtcacccacactcacaatgaatc 11181756  T
Q  391 ctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||| |||| ||||||||| ||||||||  |  |||||| ||||||||||||||||||||||    
T  11181755 ctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatttcactacccaaggtgtttacaa 11181684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 458
Target Start/End: Complemental strand, 42127419 - 42127266
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    |||||||||||||||  || ||||| ||||| ||||||   ||| |||||||| ||||||||   ||| || || | ||| |||||||||||||||||||    
T  42127419 gttacaagaaattagcttataagcttacaaaagaacaagtcctactttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacac 42127320  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
     |||||||||||||| ||||||||  |  |||||||||||||||||||||||||    
T  42127319 aaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgttt 42127266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 22 - 467
Target Start/End: Original strand, 2630035 - 2630481
Alignment:
Q  22 atgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    |||||| |||||| ||||| ||| || | ||||||||||  ||||| ||||||||| ||| |||||| ||||||  ||||||||||||||||||||||||    
T  2630035 atgttgggaattctaacaa-aaatcacaacaataaaactatgatgtatgaagcaaaggaagtagtaagcaatgaataaagtagcctcaagcaacaacaac 2630133  T
Q  122 ------aacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaat 215  Q
          |||| |||| |||| ||| |||||   || ||||||||||| |||   ||| ||| | ||||| ||| |||||||| ||||  ||   ||||||    
T  2630134 aacaaaaacaaataggcctaaatctaagtgcagagcaacaccacaagcatatttaaagcaatagagataagaaggaagagaataaaacaaacgcatcaat 2630233  T
Q  216 gtttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaa 315  Q
      ||||| || ||||||||||| || | ||||| |||| |||| |||| || |||||| | ||| | |||||  | |||||||||||  |||||||| ||    
T  2630234 -attgttaacctagttcggtcc-aatatgacctgcttt-gagg-gagatagcagctcttcaatccactatgatgaaagtgatacaaaagggttacaataa 2630329  T
Q  316 attagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagct 415  Q
    |||||  || || | |||||||||||||  ||| ||| ||   |||||||||| ||| |  || ||||| |||||||||||||||||||||||| |||||    
T  2630330 attagcttaaaaacacacaaagaacaaaacctaatttttatacatttttcaagtcaccctcactcacaatgaatcctaagagaaaacactaaaggaagct 2630429  T
Q  416 tttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |||| |||||| |  |  |||||| |||||| | ||| ||||| ||||||||    
T  2630430 ttttgatcctttcaatggtgaaatttcactatcaaagatgtttgcaaatgtt 2630481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 10281921 - 10281997
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  10281921 gaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 10281997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 334 - 462
Target Start/End: Original strand, 28832374 - 28832502
Alignment:
Q  334 aaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaa 433  Q
    |||||||||  |||| |||||||| ||||||||   ||| || || | ||| ||||||||||||||||||| |||| ||||||||| ||||||||  |      
T  28832374 aaagaacaagttctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatgg 28832473  T
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  28832474 tgaaatctcactacccaaggtgtttacaa 28832502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 5610985 - 5611132
Alignment:
Q  55 aaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaac 154  Q
    ||||||||| || |||||||||| ||| |||||||||||||| ||||||| || ||||||||| || |||| | | ||||||||| ||| || ||  |||    
T  5610985 aaaacttaggtgagtgaagcaaatgaagtagtaatcaatgagtaaagtagtcttaagcaacaaaaataacaaacaaacctagatctaagagtgaaacaac 5611084  T
Q  155 accacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaa 202  Q
    |||| ||| |||  |||| ||||||||||| |||||||| ||||||||    
T  5611085 accataagaatattcaaagcaacaaagataagaaagaagggaagaaaa 5611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 17003887 - 17003811
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  17003887 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 17003811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 443
Target Start/End: Original strand, 3651613 - 3651729
Alignment:
Q  330 tcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagctttttta---tcctt 426  Q
    ||||||||||||||| ||| |||||||| |||||||||| |||||||||| | || ||||||||||| ||||||  | ||||| |||||| |   |||||    
T  3651613 tcacaaagaacaaaccctaatttctacccatttttcaagtcactcaaacctataatgaatcctaagataaaacaagagagaaaactttttgatattcctt 3651712  T
Q  427 cctctaatgaaatctca 443  Q
    |||||||||| ||||||    
T  3651713 cctctaatgagatctca 3651729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 404
Target Start/End: Original strand, 6741927 - 6742039
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    ||||||||||||| |||||||||||||||  | ||| |||||||||||||||  ||| |||||||  |||||||||| ||| || || | ||| ||||||    
T  6741927 agtgatacaaagaagttacaagaaattagcttgcaaactcacaaagaacaaaacctaatttctactcatttttcaagtcacccacactctcaatgaatcc 6742026  T
Q  392 taagagaaaacac 404  Q
    ||||| |||||||    
T  6742027 taagaaaaaacac 6742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 31300523 - 31300447
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||  |  |||||||||||||||||||||||||||||    
T  31300523 gaatcctaagagaaaacacaaaaggaagccttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 31300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 400
Target Start/End: Complemental strand, 33030962 - 33030854
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||| ||| | ||||||||||||||||  || ||||||||||||||||||   || |||||||| |||||||||| |||||| || | ||| ||||||    
T  33030962 agtgatgcaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacataatttctacccatttttcaagtcactcacactctcaatgaatcc 33030863  T
Q  392 taagagaaa 400  Q
    |||||||||    
T  33030862 taagagaaa 33030854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 7160925 - 7160756
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaa-actctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    |||||||||||| |||||||| |||||||  |  ||||||||||||||||| ||| || |||||||  |||||| ||| |||| | || | ||| |||||    
T  7160925 agtgatacaaaggggttacaaaaaattagatttaaagctcacaaagaacaagact-taatttctacatattttttaagtcact-acactctcaatgaatc 7160828  T
Q  391 ctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||  |||  ||||||||| ||||||||  | |||||||||||||  |||||||| ||||||    
T  7160827 ctaagagaaaacataaaatgaagctttttgatccttccaatgatgaaatctcactgtccaaggtgattacaa 7160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 359 - 458
Target Start/End: Original strand, 17464185 - 17464284
Alignment:
Q  359 atttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    |||||||||| |||||||||||| || ||||  ||||| |||||| ||||||||||||||| ||| ||| |||||||| |||| |||||| || ||||||    
T  17464185 atttttcaagtcactcaaacccataatgaattttaagacaaaacaataaagaaagctttttgatctttcatctaatgagatcttactaccgaatgtgttt 17464284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 24553455 - 24553379
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||| |||||||||||||| |||| ||||||||| |||||||   |  |||||||||||||||||||||||||||||    
T  24553455 gaattctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctcactacccaaggtgtttacaa 24553379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 467
Target Start/End: Original strand, 5611219 - 5611392
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatcct 392  Q
    |||||||||||| ||| || |||||||  || ||| |||||||||||||| |||  |||||| | |||||| ||| ||   | || || ||| || ||||    
T  5611219 tgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcataaacactcataaatgattcct 5611317  T
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    ||||||||||||||||| ||||||||| ||| || |  ||||||||||||| || | ||||||||||| ||||||    
T  5611318 aagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtt 5611392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 11916895 - 11916824
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||| |||| ||| ||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  11916895 cctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 11916824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 19588914 - 19588990
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||  |  |||||||||||| |||||| |||||||||    
T  19588914 gaatcctaagagaaaacacaaaaggaagatttttgatccttccaatggtgaaatctcactgcccaagatgtttacaa 19588990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 28537469 - 28537532
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    |||||| || ||||||| |  |||||||||||||| ||||||| ||||||||||||||||||||    
T  28537469 agatgtatggagcaaaaaaggtagtaatcaatgagtaaagtagtctcaagcaacaacaacaaca 28537532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 3880469 - 3880545
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||| ||||||| || |||| ||||||||| ||||||||  |  ||||||||||| |||||| ||||||||||    
T  3880469 gaatcctaggagaaaaaacaaaaggaagctttttgatccttccaatggtgaaatctcacaacccaatgtgtttacaa 3880545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 14520079 - 14520188
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||| | |||||||||| | |||||  |  |||||||||||||||| | | ||||||||||| ||||||  || ||||||||||    
T  14520079 agatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaacaacaa-aaacagacctagatctaagtgtagagcaacaccacaa 14520177  T
Q  162 gtataaccaaa 172  Q
    | |||| ||||    
T  14520178 gcataaacaaa 14520188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 9353252 - 9353184
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  9353252 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 9353184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 16452163 - 16452092
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||| |||||||||||| || |||||||| |||||||    
T  16452163 gatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaact-taatttctacccatttttc 16452092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 33831763 - 33831692
Alignment:
Q  295 gatacaaagaggttacaagaaattagtcta--caagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  ||  |||||||||||||||||||| ||| |||||||| |||||||    
T  33831763 gatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaac-ctaatttctacccatttttc 33831692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 9020489 - 9020453
Alignment:
Q  228 agttcggtccaaaaaagacctactttggaggagagag 264  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  9020489 agttcggtccaaaacagacctaatttggaggagagag 9020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 15464470 - 15464502
Alignment:
Q  152 aacaccacaagtataaccaaaacaacaaagata 184  Q
    ||||||||||||||||||||||||| |||||||    
T  15464470 aacaccacaagtataaccaaaacaataaagata 15464502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 361 - 401
Target Start/End: Original strand, 31336221 - 31336261
Alignment:
Q  361 ttttcaagccactcaaacccacaaagaatcctaagagaaaa 401  Q
    |||||||| |||||||||||||||  |||||||||||||||    
T  31336221 ttttcaagtcactcaaacccacaataaatcctaagagaaaa 31336261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 36932228 - 36932200
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  36932228 tgaaatctcactacccaaggtgtttacaa 36932200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 38219617 - 38219645
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  38219617 tgaaatctcactacccaaggtgtttacaa 38219645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 1e-70; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 25 - 467
Target Start/End: Complemental strand, 28771068 - 28770621
Alignment:
Q  25 ttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaa------gcaacaac 118  Q
    ||||||||| ||||||  || ||||||||||||| ||||| |||||  ||||| ||| ||||||||||||||| |||||| | |||      ||||||||    
T  28771068 ttgtgaatttgaacaaataatcatatcaataaaatttagacgtgtggtgcaaatgaagtagtaatcaatgagcgaagtagtcgcaaacagtagcaacaac 28770969  T
Q  119 aac---aacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaat 215  Q
    |||   |||| ||||||||||||| |||||| ||| ||||||||||| |||| |||| ||| ||| |||  |||||||||||   |||||| | | ||||    
T  28770968 aactacaacaaatagacctagatctaagtgtgaagcaacaccacaagcataatcaaagcaaaaaatataataaagaagagaaaggaaacaagacaccaat 28770869  T
Q  216 gtttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaa 315  Q
     ||| ||||| || | ||||| ||||| |||||||| ||||||| ||||   ||||||||||||   || || |||| |||||||||||  |||||||||    
T  28770868 attt-tttaccta-tacggtctaaaaatgacctactctggaggatagagc--agctctccgatcctctacgataagaatgatacaaagatattacaagaa 28770773  T
Q  316 attagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagct 415  Q
    |||||  || ||||||||||||||||||||||| |||||||| |||||||||| ||  || || | ||| |||||||||||||||||||||||| || ||    
T  28770772 attagcttaaaagctcacaaagaacaaactctaatttctacccatttttcaagtcatacacactcgcaatgaatcctaagagaaaacactaaaggaaact 28770673  T
Q  416 tttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  28770672 tttttatccttcagctaatgagatctcactacccaaggtgtttacaaatgtt 28770621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 112 - 467
Target Start/End: Complemental strand, 18674598 - 18674248
Alignment:
Q  112 caacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagat 211  Q
    ||||||||| |||| | ||||||||||  |||||| |||||||||||| || |||  | |||||||||||||| |||| |||||||  ||||||| | ||    
T  18674598 caacaacaataacaaacagacctagatttaagtgtgaagtaacaccacgagcatattcgaaacaacaaagataagaaa-aagagaaagaaaacaagacat 18674500  T
Q  212 caatgtttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttaca 311  Q
    |||| || |||||   ||||||  | |||||  | ||||| |  |||| |||||| |||||||||||||| ||||| ||||||||||| ||| |||||||    
T  18674499 caatatt-gtttatccagttcgagcaaaaaattatctactgt--agga-agagagcagctctccgatctactatgacaagagtgataccaaggggttaca 18674404  T
Q  312 agaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatcctaagagaaaacactaaaga 410  Q
    |||||||||| || |||||||||||||||||||  || |||||| | |||||||||| ||| || || || ||| ||||| |||||||||||| |||||     
T  18674403 agaaattagtttaaaagctcacaaagaacaaaccataatttctatccatttttcaagtcacccacactcataaatgaatcataagagaaaacattaaagg 18674304  T
Q  411 aagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    ||||||||| |||||| |  ||||||||||||||| | |||||||||||| ||||||    
T  18674303 aagctttttgatcctt-caataatgaaatctcactgctcaaggtgtttacgaatgtt 18674248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 56 - 467
Target Start/End: Original strand, 3277849 - 3278250
Alignment:
Q  56 aaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaaca 155  Q
    ||||||||||||||  || |||||   ||||||||||| |||||||||  | |||| ||||||||||||| ||||| ||||||| |||||| ||| ||||    
T  3277849 aaacttagatgtgttgagaaaaag---tagtaatcaattagcaaagtaatcacaagaaacaacaacaacaaatagatctagatctaagtgtgaagcaaca 3277945  T
Q  156 ccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtttacgtagttcggtccaaaaaagacctactttgg 255  Q
    | ||||  |||  |||| ||| ||||||| |||| |||||| | |||| || | |||||  || ||||||  | ||| ||||||||  |||||||| |||    
T  3277946 ctacaaacatattcaaagcaaaaaagataagaaataagagagggaaaa-aacacatcaacatt-gtttactcatttccgtccaaaat-gacctactatgg 3278042  T
Q  256 aggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttcta 355  Q
    |||||||||   | | || ||||||| |||||  ||| ||||| |||||||||| ||||||||||  || || ||||||| ||||||| ||   |||||     
T  3278043 aggagagagc--atcacttcgatctactatgatgagaatgata-aaagaggttataagaaattagcttaaaacctcacaa-gaacaaattccgatttctt 3278138  T
Q  356 ccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtg 455  Q
    |  |||||||||  |||||| || ||||| ||| ||||||||||||| |||||| ||| ||||| |||| |||| |||||||||||||||| ||||||||    
T  3278139 ctcatttttcaattcactcacactcacaatgaaccctaagagaaaacgctaaaggaagttttttgatccgtcctataatgaaatctcactatccaaggtg 3278238  T
Q  456 tttacaaatgtt 467  Q
    ||||||||||||    
T  3278239 tttacaaatgtt 3278250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 23 - 485
Target Start/End: Complemental strand, 2869985 - 2869520
Alignment:
Q  23 tgttgtgaattcgaacaataaaac-atatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    ||||||||||||| |||| ||||  |||  |||||||||   |||| || |||||| ||| |||| ||||||||| |||||||| |||| ||||||||||    
T  2869985 tgttgtgaattcggacaaaaaaaatatacaaataaaactactatgtttggagcaaaggaagtagtgatcaatgagtaaagtagcatcaaacaacaacaac 2869886  T
Q  122 aacag---atagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacg-aaagaagagaagaaaaacaatagatcaatgt 217  Q
    ||||    ||||||||| ||| ||||||  || ||||||| ||| |||  |||| ||||||||||| | ||| ||  ||||| ||  || | | |||| |    
T  2869885 aacaacaaatagacctaaatctaagtgtagagcaacaccataagcatattcaaagcaacaaagataagcaaataaaggaagagaacaaacacaccaatat 2869786  T
Q  218 ttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaat 317  Q
    | ||||||  |||||||||||| |  |||||||| |  ||| ||||||| |||||||| ||| | || ||  | ||||||||||||  ||||||||||||    
T  2869785 t-gtttacccagttcggtccaatat-gacctactct--aggggagagagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaat 2869690  T
Q  318 tagtctacaagctcacaaagaacaaactc-tattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagctt 416  Q
    |||  || ||||||||||||||||||  | || |||||||| |||||||||| ||| || || | ||| |||||||||||||||||||||| | ||||||    
T  2869689 tagcttaaaagctcacaaagaacaaaaacctaatttctacccatttttcaagtcacccacactctcaatgaatcctaagagaaaacactaacggaagctt 2869590  T
Q  417 ttttatccttcctctaatgaaatctcactacccaaggtgtttacaa-atgttccaactcaagataacctc 485  Q
    ||| || |||||  |   ||||||||||||||||| ||||||||||  | ||||||||||||| ||||||    
T  2869589 tttgattcttccaatggcgaaatctcactacccaatgtgtttacaatgttttccaactcaagagaacctc 2869520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 15903911 - 15903742
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||||||| |||| |||||||| |||||||||| ||| || || | ||| ||||||    
T  15903911 agtgatacaaaggggttacaagaaat-agcttacaagctcacaaagaacaaattctaatttctacccatttttcaagtcacccacactctcaatgaatcc 15903813  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    || |||||||||| ||||||| |||||||||| ||||  |  |||||||||| || |||| ||||||||||    
T  15903812 tatgagaaaacacaaaagaaatcttttttatcattccaatggtgaaatctcattatccaatgtgtttacaa 15903742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 314 - 507
Target Start/End: Complemental strand, 41586549 - 41586356
Alignment:
Q  314 aaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaag 413  Q
    |||||||| || |||| ||||||||||||||| || |||||||| |||||||||| |||||  || || || | |||||||||||||||| ||||||||     
T  41586549 aaattagtttaaaagcacacaaagaacaaactttaatttctacctatttttcaagtcactc--actcagaatggatcctaagagaaaacattaaagaaaa 41586452  T
Q  414 cttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatg--ttccaactcaagataacctctcacaaaatacactcaacccta 507  Q
    |||||| || || |  ||| | ||||||||||||||||||||||||||| ||  ||||||| ||||| || ||||||| ||| |||||||||||||    
T  41586451 ctttttgattctcctcctagtaaaatctcactacccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaacccta 41586356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 16388760 - 16388449
Alignment:
Q  22 atgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctca---agcaacaac 118  Q
    ||||||||||||| |||||  || || ||||||||| |||||||||||| |||||||  | |||||||||||||| ||||||| ||||   |||| ||||    
T  16388760 atgttgtgaattcaaacaaataatcacatcaataaa-cttagatgtgtggagcaaaaatagtagtaatcaatgagtaaagtagtctcaagcagcagcaac 16388662  T
Q  119 aacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtt 218  Q
    ||||||| | ||||||||||  | |||| ||| ||||| | ||| ||| ||||| ||| ||||||| || |||| || || ||||||| | | ||||  |    
T  16388661 aacaacaaacagacctagatgtatgtgtgaagcaacactataagcatatccaaagcaataaagataagagagaa-aggaggaaaacaacacaccaat-at 16388564  T
Q  219 tgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaatt 318  Q
    |||||||  |||| |||||||||| |||||||| | |||  ||||||| ||||||||  || | | ||| ||||| |||| |||||||||||||||||||    
T  16388563 tgtttacccagtttggtccaaaaatgacctactctagag--gagagagcagctctcctttccactttgataagagagatagaaagaggttacaagaaatt 16388466  T
Q  319 agtctacaagctcacaa 335  Q
    ||  || ||||||||||    
T  16388465 agcttaaaagctcacaa 16388449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 14698937 - 14698861
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  || |||||||||||||||||||||||||||||    
T  14698937 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatagtgaaatctcactacccaaggtgtttacaa 14698861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 21630114 - 21630190
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  21630114 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 21630190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 34389020 - 34389096
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  34389020 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 34389096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 260 - 419
Target Start/End: Original strand, 27139845 - 27140004
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga 359  Q
    ||||||| |||||||| ||  | ||||| || ||||||||||| | |||||| |||||||   |  |||||||||||| |||||| ||| |||||||  |    
T  27139845 gagagagcagctctccaattcactatgaaaatagtgatacaaaaatgttacaggaaattaaatttaaagctcacaaagtacaaaccctaatttctacaca 27139944  T
Q  360 tttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttt 419  Q
    | ||||||| ||||  |||||| || ||||||||| |||||||| |||||||||||||||    
T  27139945 tatttcaagtcacttgaacccaaaatgaatcctaatagaaaacaataaagaaagcttttt 27140004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 17865374 - 17865450
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| |||||||   |  |||||||||||||||||||||||||||||    
T  17865374 gaatcctaagagaaaacacaaaaggaagctttttgatccttctatttgtgaaatctcactacccaaggtgtttacaa 17865450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 31056212 - 31056288
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| |||||| |  |  |||||||||||||||||||||||||||||    
T  31056212 gaatcctaagagaaaacacaaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaa 31056288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 33528552 - 33528476
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||| ||||||||||    
T  33528552 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaatgtgtttacaa 33528476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 507
Target Start/End: Original strand, 39483102 - 39483224
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa-atgttccaactcaagataacct 484  Q
    ||||||||||||||||||| |||| ||| ||||| ||| ||||  |  ||||||||||||||||||||||||||||| || | ||||| ||||| | |||    
T  39483102 gaatcctaagagaaaacacaaaaggaagttttttgatcattccaatggtgaaatctcactacccaaggtgtttacaatatttcccaacccaagagatcct 39483201  T
Q  485 ctcacaaaatacactcaacccta 507  Q
    | ||  ||| |||||||||||||    
T  39483202 cacaacaaagacactcaacccta 39483224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 13569498 - 13569571
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttta 459  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  ||||||||||||| ||||||||||||    
T  13569498 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgttta 13569571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 10707180 - 10707104
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| |||||||   |  |||||||| ||||||||||||||||||||    
T  10707180 gaatcctaagagaaaacacaaaaggaagctttttgatccttctaatggtgaaatctaactacccaaggtgtttacaa 10707104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 33118304 - 33118380
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||| |||| ||||||||| ||||||||  |   ||||||||||||||||||||||||||||    
T  33118304 gaatcttaagagaaaacacaaaaggaagctttttgatccttccaatggcgaaatctcactacccaaggtgtttacaa 33118380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 44732104 - 44732191
Alignment:
Q  370 cactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    ||||||||||||||| ||||||||||||||||||  | |||||| ||||||||| ||| |||||||||||  ||||| | |||||||||    
T  44732104 cactcaaacccacaatgaatcctaagagaaaacaagagagaaag-ttttttatctttcttctaatgaaattccactatctaaggtgttt 44732191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 2838052 - 2837881
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||   ||||||||||||||||  |  ||||||||||||||| |  ||| ||| | || |||||||| | ||| ||    | ||| ||||||    
T  2838052 agtgatacaaatgagttacaagaaattagtacaagagctcacaaagaacacaacctaatttttgcccatttttcatgtcacccaccttctcaatgaatcc 2837953  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaa-tctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||| ||  ||||||||||||||  |  ||||| |||||||| |||||||||||||||    
T  2837952 taagagaaaacactaaaggaatattttttatccttccaatggtgaaattctcactatccaaggtgtttacaa 2837881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 16388259 - 16388360
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||||||||||||  || || | | || ||||||||||||||| ||||||  || |||||||||||||  ||||||| |||||||| ||||||||    
T  16388259 tgttgtgaattcgaacaaataatcacaccgat-aaacttagatgtgtggagcaaagaaagtagtaatcaatgaataaagtagtctcaagcagcaacaaca 16388357  T
Q  123 aca 125  Q
    |||    
T  16388358 aca 16388360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 8040232 - 8040309
Alignment:
Q  386 gaatcctaagagaaaa-cactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||| ||  |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  8040232 gaatcctaagagaaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 8040309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 34393238 - 34393338
Alignment:
Q  22 atgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    |||||||||||| |||| | ||| || |||||| ||||||| ||||||||||||||| || || |||| |||||| ||||| || |||||||| ||||||    
T  34393238 atgttgtgaattagaacga-aaatcacatcaatgaaacttaaatgtgtgaagcaaaaaaagtaataattaatgagtaaagtggcttcaagcaataacaac 34393336  T
Q  122 aa 123  Q
    ||    
T  34393337 aa 34393338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 15904116 - 15904076
Alignment:
Q  85 gtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  15904116 gtaatcaatgagcaaagtatcctcaagcaacaacaacaaca 15904076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 23078394 - 23078323
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| ||||||||  ||||||||  | ||||||||||||||||||||||||||||||    
T  23078394 cctaagagaagacacaaaaggaagcttttg-atccttccaatgatgaaatctcactacccaaggtgtttacaa 23078323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 34682261 - 34682185
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| || | |||| |||||||   |  |||||||||||||||||||||||||||||    
T  34682261 gaatcctaagagaaaacacaaaaggaaacattttgatccttcaagtggtgaaatctcactacccaaggtgtttacaa 34682185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 45727012 - 45726943
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||| |||||||||||||||||  || ||||||||||||||||| ||||||| |||||||| |||||    
T  45727012 gatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccatttt 45726943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 8390077 - 8390001
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| | || ||||||||| || |||||  |  | ||||||||||| |||||||||||||||    
T  8390077 gaatcctaagagaaaacacaagaggaagctttttgattcttccaatggtaaaatctcactatccaaggtgtttacaa 8390001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 10445375 - 10445319
Alignment:
Q  406 aaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  10445375 aaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 10445319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 40015095 - 40015170
Alignment:
Q  387 aatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| ||| ||| |||| ||||||||| ||||||||  |  ||||||||||||| |||| ||||||||||    
T  40015095 aatcctaagaaaaatcacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaatgtgtttacaa 40015170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 11151673 - 11151745
Alignment:
Q  292 agtgatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||||||  ||||||||||||||||  |  |||||||||||||||||||| |||| |||||||| |||||    
T  11151673 agtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-tctaatttctacccatttt 11151745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 23078719 - 23078609
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||| | |||||||||| | |||||  |  |||||||||||||||| | | | ||||||||| ||||||  || ||||||||||    
T  23078719 agatgtgtggagcaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaacaacaaaaaacatacctagatctaagtgtagagcaacaccacaa 23078620  T
Q  162 gtataaccaaa 172  Q
    | |||| ||||    
T  23078619 gcataatcaaa 23078609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 401
Target Start/End: Complemental strand, 27149316 - 27149207
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaa-actctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    |||||||||||| ||| |||||||||||   || ||||||||||||||||| ||| ||  |||||||  ||||| ||| ||| || || ||||| |||||    
T  27149316 agtgatacaaaggggtaacaagaaattaccttaaaagctcacaaagaacaagact-taacttctacctgttttttaagtcacccacactcacaatgaatc 27149218  T
Q  391 ctaagagaaaa 401  Q
    |||||||||||    
T  27149217 ctaagagaaaa 27149207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 33528868 - 33528747
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||| | ||||||||||   |||||  || |||||||||||||||| | | ||||||||||| || |||  || ||||||||||    
T  33528868 agatgtgtggagcaaaggaagtggtaatcaatggataaagtgtccccaagcaacaacaacaa-aaacagacctagatctaaatgtagagcaacaccacaa 33528770  T
Q  162 gtataaccaaaacaacaaagata 184  Q
    | |||| |||| ||| |||||||    
T  33528769 gcataatcaaagcaataaagata 33528747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 5077797 - 5077858
Alignment:
Q  283 tatgagaagagtgatacaaagaggttacaagaaatta-gtctacaagctcacaaagaacaaa 343  Q
    ||||| ||||||||||||||| |||||||||||||||  |||  ||||| ||||||||||||    
T  5077797 tatgataagagtgatacaaagtggttacaagaaattatatcttaaagcttacaaagaacaaa 5077858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 20522394 - 20522467
Alignment:
Q  389 tcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||| ||||||| |||| ||||||||| ||| |||   |  ||||||||||||||||||| |||||||||    
T  20522394 tcctaagaaaaaacacaaaaggaagctttttgatcattcaaatggtgaaatctcactacccaagttgtttacaa 20522467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 27149089 - 27149052
Alignment:
Q  86 taatcaatgagcaaagtagcctcaagcaacaacaacaa 123  Q
    ||||||||||| |||||||| |||||||||||||||||    
T  27149089 taatcaatgagtaaagtagcatcaagcaacaacaacaa 27149052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 27149525 - 27149480
Alignment:
Q  80 aaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    |||| |||||||||||| |||||||||||||| ||||| |||||||    
T  27149525 aaatggtaatcaatgagtaaagtagcctcaagtaacaataacaaca 27149480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 36757682 - 36757614
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  36757682 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 36757614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 162
Target Start/End: Original strand, 5699691 - 5699735
Alignment:
Q  118 caacaacagatagacctagatcaaagtgttaagtaacaccacaag 162  Q
    |||||||| ||||||||||||| |||||| ||| |||||||||||    
T  5699691 caacaacaaatagacctagatctaagtgtaaagcaacaccacaag 5699735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 289 - 368
Target Start/End: Original strand, 12632619 - 12632696
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaag 368  Q
    ||||||| ||||||||||||| ||||||||||| || |  ||||| |||||||||| |||  ||||| | ||||||||||    
T  12632619 aagagtggtacaaagaggttaaaagaaattagtttaga--ctcaccaagaacaaaccctaacttctatccatttttcaag 12632696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 13121843 - 13121788
Alignment:
Q  304 aggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctacc 357  Q
    ||||||||||||||||   || ||||||||||||||||||||| ||| ||||||||    
T  13121843 aggttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctacc 13121788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 24398140 - 24398089
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaac 344  Q
    ||||||||  ||||||||||||||||  || |||||||||||||||||||||    
T  24398140 gatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaac 24398089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 25409848 - 25409876
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  25409848 tgaaatctcactacccaaggtgtttacaa 25409876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 290 - 363
Target Start/End: Original strand, 33162530 - 33162604
Alignment:
Q  290 agagtgatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||| ||||||||  ||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||    
T  33162530 agagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttt 33162604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 34388709 - 34388808
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||| | |||||||||  | |||||  | ||||||||||||||||| | | ||||||||||| ||||||  || ||||||||||    
T  34388709 agatgtgtggagcaaaggaagtggtaatcaatatgtaaagtgtcttcaagcaacaacaacaa-aaacagacctagatctaagtgtagagcaacaccacaa 34388807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 23 - 489
Target Start/End: Original strand, 37781673 - 37782137
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    |||||||||||| |||||  ||  |||  ||||||||||||| ||||| |||||||||| |||| || |||||| |||||| | |||| |||||||| ||    
T  37781673 tgttgtgaattcaaacaaataattataataataaaacttagaagtgtggagcaaaagaagtagtcattaatgagtaaagtatcatcaatcaacaacatca 37781772  T
Q  123 acagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtt 222  Q
    ||| ||||||||||||| |||||| ||| ||||||||||| |||  |||| ||||||||||| |||| || ||||| ||||||| | | ||||  |||||    
T  37781773 acaaatagacctagatctaagtgtgaagcaacaccacaagcatattcaaagcaacaaagataagaaataatagaag-aaaacaacaaaccaat-attgtt 37781870  T
Q  223 tacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtc 322  Q
    |||  ||||||||  ||| | |||||||||    |||||||||| | |||||| ||| | ||| | || |||||||||||||||||||||||||||||      
T  37781871 tacccagttcggtttaaatatgacctactt---cggagagagagtaactctccaatccactataataaaagtgatacaaagaggttacaagaaattagct 37781967  T
Q  323 tacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatcctaagagaaaacactaaagaaagctttttta 421  Q
    || || |||||||||||||||   || |||||||| |||||||||| |||  | || |  ||| ||||| |||||||||||||||||  |  |||||| |    
T  37781968 taaaaactcacaaagaacaaatcttaatttctacccatttttcaagtcacctacactcgtaaatgaatcttaagagaaaacactaaaagagactttttga 37782067  T
Q  422 tccttcctctaatgaaatctcactacccaaggtgtttacaaatg--ttccaactcaagataacctctcac 489  Q
    | |||||  |||||||||||||||||||||||||||||||||||  ||||||| ||||| | ||||||||    
T  37782068 ttcttccaataatgaaatctcactacccaaggtgtttacaaatgttttccaacccaagagagcctctcac 37782137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 297 - 507
Target Start/End: Complemental strand, 34670682 - 34670469
Alignment:
Q  297 tacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaaga 396  Q
    ||||||||||||||||||||||||  ||  |||||||||||||||||   || |||||| | |||||||||| |||||| || ||||| |||||||||||    
T  34670682 tacaaagaggttacaagaaattagcttaatagctcacaaagaacaaatcataatttctatccatttttcaagtcactcacactcacaatgaatcctaaga 34670583  T
Q  397 gaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt--ccaactcaag-ataacctctcacaaaa 493  Q
    |||||||||||||||| |||||  |||||||||||||||| ||||||||||||||| || |||||||||||   ||||||||| | || ||||||| |||    
T  34670582 gaaaacactaaagaaaacttttagatccttcctctaatgagatctcactacccaagatgcttacaaatgtttctcaactcaagaaaaaactctcactaaa 34670483  T
Q  494 tacactcaacccta 507  Q
    ||||||| ||||||    
T  34670482 tacactctacccta 34670469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 283 - 467
Target Start/End: Original strand, 39593794 - 39593976
Alignment:
Q  283 tatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccac 382  Q
    ||||| |||||||||||||| | |||||||||||||||| ||||| |||||||||||  ||| ||| ||||||||  ||| ||||| |||||||||||||    
T  39593794 tatgataagagtgatacaaataagttacaagaaattagtttacaaactcacaaagaatcaac-ctaatttctacccctttgtcaagtcactcaaacccac 39593892  T
Q  383 aaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    || ||||||||||||||| |||| ||| |||||||||  || |||||||||||| ||||||| |  |||||||||||||||||||    
T  39593893 aatgaatcctaagagaaaccactcaaggaagctttttggtcattcctctaatgagatctcac-attcaaggtgtttacaaatgtt 39593976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 268 - 424
Target Start/End: Complemental strand, 18912409 - 18912254
Alignment:
Q  268 agctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaa 367  Q
    |||||||| ||| | ||||| |||||||||||||| ||| |||||||||||||| ||||| |||||||||||||||| |||  || || | |||||||||    
T  18912409 agctctccaatccactatgataagagtgatacaaaaaggatacaagaaattagtttacaaactcacaaagaacaaaccctaaattatatccatttttcaa 18912310  T
Q  368 gccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcc 424  Q
    | ||||||||||||||| |||||||||||||||| | ||||| ||||||||| ||||    
T  18912309 gtcactcaaacccacaatgaatcctaagagaaaataataaag-aagctttttaatcc 18912254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 5112312 - 5112482
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||| ||||||  ||||||||||||||||  || || |||| ||| ||| |   ||| ||| |||| |||||| ||| |||||| || ||||| ||||||    
T  5112312 agtgttacaaatgggttacaagaaattagcttaaaaactcataaaaaacgagacctaatttgtacctattttttaagtcactcacactcacaatgaatcc 5112411  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||  |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  5112412 taagagaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 5112482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 292 - 485
Target Start/End: Complemental strand, 39774327 - 39774133
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaa-caaactctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    ||||||||||| |||||||||||||||||  || |||||||||||||| |||   ||| |||||||| ||||| || | |||||| || | ||| |||||    
T  39774327 agtgatacaaataggttacaagaaattagcttaaaagctcacaaagaaacaagacctaatttctaccaatttt-catgtcactcacactctcaatgaatc 39774229  T
Q  391 ctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt--ccaactcaagataacctc 485  Q
    | ||||||||| || |||| ||||||||| ||| ||||  |  ||||| ||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  39774228 ccaagagaaaatacaaaaggaagctttttgatcattccaatggtgaaaactcactacccaaggtgtttac-aatgtttcccaactcaagagaacctc 39774133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 261 - 469
Target Start/End: Complemental strand, 873571 - 873363
Alignment:
Q  261 agagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgat 360  Q
    |||||| | |||||||||| | |||||  ||| |||||| || ||||||||||||||||   || |||||| |||| ||||||  ||| |||||||  ||    
T  873571 agagagcaactctccgatccactatgattagaatgataccaataggttacaagaaattaacttaaaagctcgcaaataacaaatcctaatttctactcat 873472  T
Q  361 ttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttac 460  Q
     |||| || ||| || |  ||||   | || ||||||||||||| |||  ||||||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  873471 atttcgagtcacccacagtcacattaagtcttaagagaaaacacaaaatgaagctttttgatcctccctctaatgagatctcactactcaaggtgtttac 873372  T
Q  461 aaatgttcc 469  Q
    |||||||||    
T  873371 aaatgttcc 873363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 292 - 428
Target Start/End: Complemental strand, 1983322 - 1983187
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||| ||||||||||||||||  | |||||||||||||||||||   || |||||| |  ||||||||| |||  | || | ||| ||||||    
T  1983322 agtgatacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacataatttctatc-ctttttcaagtcacctacactctcaatgaatcc 1983224  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcc 428  Q
    ||||||||||| | |||| ||||||||||||||||||    
T  1983223 taagagaaaacccaaaaggaagcttttttatccttcc 1983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 24333980 - 24334056
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  24333980 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 24334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 459
Target Start/End: Complemental strand, 42599502 - 42599429
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttta 459  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||  |  ||||||||||||||||||||||||||    
T  42599502 gaatcctaagagaaaacacaaaaggaagtttttttatccttccaatggtgaaatctcactacccaaggtgttta 42599429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 3794008 - 3793932
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||| |||||| |||| ||||||||| |||||| || |  |||||||||||||||||||||||||||||    
T  3794008 gaatcctaagagcaaacacaaaaggaagctttttgatcctttctatggtgaaatctcactacccaaggtgtttacaa 3793932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 5269128 - 5269052
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  ||||||||||||| |||||||||||||||    
T  5269128 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaa 5269052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 3677787 - 3677671
Alignment:
Q  56 aaacttagatgtgtgaagcaaaa-gaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaac 154  Q
    ||||||||||||||| ||||||| ||| |||||| |||| | ||||||||| ||||||||||||||||    ||||||||| ||| |||||| ||| ||     
T  3677787 aaacttagatgtgtggagcaaaacgaagtagtaaccaataatcaaagtagcttcaagcaacaacaaca----atagacctatatctaagtgtgaagcaaa 3677692  T
Q  155 accacaagtataaccaaaaca 175  Q
    | |||||| ||||||||||||    
T  3677691 aacacaaggataaccaaaaca 3677671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 3777718 - 3777794
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||| || |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  3777718 gaatcctaagagaaaatacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa 3777794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 10047550 - 10047626
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||| ||||||| |||| ||| ||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  10047550 gaatcctaagacaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 10047626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 39593544 - 39593645
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaag--aaatagtaatcaatgagcaaagtagcctcaagcaacaacaa 120  Q
    |||||||||||||||||| | |||| | | ||||||||||||| |||| ||||||||  |||||||||||||| | ||||||||| ||||  ||||||||    
T  39593544 tgttgtgaattcgaacaacataacacaccgataaaacttagatttgtggagcaaaagaaaaatagtaatcaat-atcaaagtagcttcaacaaacaacaa 39593642  T
Q  121 caa 123  Q
    |||    
T  39593643 caa 39593645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 4956021 - 4956098
Alignment:
Q  46 catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaa 123  Q
    |||| ||||| ||||||||  |||| |||||| ||| || |||||||||||||| | |||||||||||||||||||||    
T  4956021 cataccaatataacttagacatgtggagcaaaggaagtaataatcaatgagcaatgcagcctcaagcaacaacaacaa 4956098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 6743342 - 6743267
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||  |  |||||||||| ||||||||||||||||||    
T  6743342 gaatcctaagagaaaacacaaaaggaag-tttttgatccttccaatggtgaaatctcattacccaaggtgtttacaa 6743267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 16623220 - 16623145
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||| ||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  16623220 gaatcctaaaagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 16623145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 16628799 - 16628724
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||| ||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  16628799 gaatcctaaaagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 16628724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 18377434 - 18377604
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaa-caaactctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    |||||||||||  ||||| ||||||| ||  || |||||||||||||| ||| | ||| |||||||| ||||| || | ||| || ||  |||| |||||    
T  18377434 agtgatacaaatgggttataagaaatcagcttaaaagctcacaaagaaacaagccctaatttctacccatttt-catgtcacccacacttacaatgaatc 18377532  T
Q  391 ctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||| ||||||| |||  ||||||||| ||||||||  |  | |||||||| ||||||||| ||||||||    
T  18377533 ctaagaaaaaacacaaaatgaagctttttgatccttccaatggtaaaatctcattacccaaggggtttacaa 18377604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 432
Target Start/End: Original strand, 36175185 - 36175321
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatccta 393  Q
    ||||||||||||||| |||||||||||  || ||||||| | |  || ||||||| |||||||| |||||  ||| ||  || || ||||| ||||||||    
T  36175185 tgatacaaagaggtttcaagaaattagcttaaaagctcatacatgacgaactctaatttctacccattttctaagtca--cacactcacaatgaatccta 36175282  T
Q  394 agagaaaacactaaagaaagcttttttatccttcctcta 432  Q
     ||||||||| ||||| ||| | ||| ||||||||||||    
T  36175283 tgagaaaacattaaaggaagttgtttgatccttcctcta 36175321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 40632528 - 40632459
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||| |||||||||||||||||  || ||||||||||||||||| ||||||| |||||||| |||||    
T  40632528 gatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccatttt 40632459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 54867349 - 54867427
Alignment:
Q  386 gaatcctaagagaaaacactaaa--gaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||  |  |||||||||||||||||  ||||||||||    
T  54867349 gaatcctaagagaaaacacaaaaaagaaagctttttgatccttccaatggtgaaatctcactacccatagtgtttacaa 54867427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 3991827 - 3991926
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    |||||||||||||||||| ||| || | ||||||| |||||||||||  | |||||||| || ||||||| |||| ||||| ||||||| ||||||||||    
T  3991827 tgttgtgaattcgaacaa-aaatcacaccaataaa-cttagatgtgttgaacaaaagaagtaataatcaacgagc-aagtaacctcaagaaacaacaaca 3991923  T

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Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 25861962 - 25861885
Alignment:
Q  386 gaatcctaagagaaaa-cactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||| ||| |||| ||| ||||| ||||||||  |  |||||||||||||| ||||||||||||||    
T  25861962 gaatcctaagagaaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactactcaaggtgtttacaa 25861885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 292 - 384
Target Start/End: Complemental strand, 42234390 - 42234299
Alignment:
Q  292 agtgatacaaagaggttacaagaaattag-tctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaa 384  Q
    ||||||| ||||||||||||||||||||| ||| |||| ||||||||||| ||||||| |||||||  |||||| |||  |||||| |||||||    
T  42234390 agtgatataaagaggttacaagaaattagatct-caagttcacaaagaac-aactctaatttctactcattttttaagttactcaatcccacaa 42234299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 379463 - 379394
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||||||| ||| |||||||| |||||    
T  379463 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 379394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 306 - 365
Target Start/End: Complemental strand, 24969184 - 24969124
Alignment:
Q  306 gttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    |||||||||||||||  || |||||||||||||||||||| |||| |||||||| |||||||    
T  24969184 gttacaagaaattagcttcaacaagctcacaaagaacaaa-tctaatttctacccatttttc 24969124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 52467436 - 52467508
Alignment:
Q  292 agtgatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||||||  |||||||||| |||||  || ||||||||||||||||||||| ||| |||||||| |||||    
T  52467436 agtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 52467508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 1983546 - 1983429
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||| || |||||||||   ||||| |  ||||||||||||||||||| |  ||| || ||| |||||| ||| | ||||||||    
T  1983546 agatgtgtggagcaaaggaagtaataatcaatggataaagtgggttcaagcaacaacaacaacaaactgacttaaatctaagtgtaaagcatcaccacaa 1983447  T
Q  162 gtataaccaaaacaacaa 179  Q
      |||| |||||||||||    
T  1983446 acataatcaaaacaacaa 1983429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 5396591 - 5396523
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||||||||||||  || |||||  |  |||||||||||||||||||||||||||||    
T  5396591 aagagaagacacaaaagaaagcttttg-attcttccaatggtgaaatctcactacccaaggtgtttacaa 5396523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 8114967 - 8114843
Alignment:
Q  75 aaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaac 174  Q
    ||||||| ||||||||||||| ||||||| | ||||||||| |||| ||   |||||||||||||  | ||| ||||||||| | || ||||   ||| |    
T  8114967 aaaagaagtagtaatcaatgaccaaagtaacatcaagcaaccacaataa---atagacctagatctcaatgtgaagtaacacaataattatatttaaacc 8114871  T
Q  175 aacaaagatacgaaagaagagaagaaaa 202  Q
    |||||| ||| || ||| ||||||||||    
T  8114870 aacaaaaataagacagatgagaagaaaa 8114843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Original strand, 16420835 - 16420903
Alignment:
Q  55 aaaacttagatgtgtgaagcaaaagaaa-tagtaatcaatgagcaaagtagcctcaagcaacaacaacaa 123  Q
    |||||||||||||||| || ||||| || |||||| | || | |||||||||||||||||||||||||||    
T  16420835 aaaacttagatgtgtggagtaaaaggaagtagtaaccgat-atcaaagtagcctcaagcaacaacaacaa 16420903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 28468416 - 28468388
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  28468416 tgaaatctcactacccaaggtgtttacaa 28468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 34496047 - 34496007
Alignment:
Q  85 gtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    ||||||||||  |||| ||||||||||||||||||||||||    
T  34496047 gtaatcaatggacaaaatagcctcaagcaacaacaacaaca 34496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 38152365 - 38152290
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| || | ||||||||  ||||||||  |  |||| | ||||||||||||||||||||||    
T  38152365 gaatcctaagagaaaacacaaatggaagcttttg-atccttccaatggtgaattgtcactacccaaggtgtttacaa 38152290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 239 - 465
Target Start/End: Original strand, 8281340 - 8281566
Alignment:
Q  239 aaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaaga 338  Q
    |||| |||||||||||||||| |||||  | ||||| |||| | ||||| |||| ||||||||| | ||||||||||||||   ||   |||||||||||    
T  8281340 aaaatgacctactttggaggaaagagaataactctctgatccactatgataagaatgatacaaatatgttacaagaaattaacataatcgctcacaaaga 8281439  T
Q  339 acaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaa 438  Q
    ||||| |||| |||||| | ||| || ||| ||| |  || ||||| |||||| ||||||||||||||||| ||| |||||||| ||||||||||||| |    
T  8281440 acaaattctaatttctatcaattatttaagtcacccgcactcacaatgaatccaaagagaaaacactaaaggaagtttttttattcttcctctaatgaga 8281539  T
Q  439 tctcactacccaaggtgtttacaaatg 465  Q
    |||||||||||||||||||||||||||    
T  8281540 tctcactacccaaggtgtttacaaatg 8281566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 260 - 458
Target Start/End: Complemental strand, 918534 - 918336
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga 359  Q
    ||||||||| |||||| | | | ||||| ||||||||||||||||  |||||||||||||   ||||| ||||||||||||||||  || |||||||| |    
T  918534 gagagagaaactctccaaaccactatgataagagtgatacaaagatattacaagaaattatcttacaaactcacaaagaacaaaccataatttctaccca 918435  T
Q  360 tttttcaa-gccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    ||||||||  |||||||||||||||| |||||||||||||||||| ||| | |||| |||| || ||||||||||||| ||||||||||||||| |||||    
T  918434 tttttcaattccactcaaacccacaatgaatcctaagagaaaacaataatggaagc-ttttgatgcttcctctaatgagatctcactacccaagatgttt 918336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 23 - 447
Target Start/End: Complemental strand, 32737279 - 32736864
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||||||||||||  || |||| |||| ||| |||  || ||| |||||| ||| | || ||||||||||||||||||||||||||||||||||     
T  32737279 tgttgtgaattcgaacaaataatcatagcaatgaaattta--tgagtggagcaaaggaagtggtgatcaatgagcaaagtagcctcaagcaacaacaacg 32737182  T
Q  123 acagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtt 222  Q
    | | |  ||| |||||| |||||| ||| |||||||||| ||||| |||| | |||| || | ||||||||||||  ||||| | | |  ||| || ||     
T  32737181 aaaca--gacttagatctaagtgtgaagcaacaccacaaatataatcaaagctacaatgaaaagaaagaagagaaagaaaactagacacaaatatt-gtg 32737085  T
Q  223 tacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatga-gaagagtgatacaaagaggttacaagaaattagt 321  Q
    |||  || ||| |||||||  |||||||| |||  ||||||||||| ||||| |||| | ||||| |||| |||||||||||||||||||| |||||||     
T  32737084 tactcagatcgatccaaaat-gacctactctgg--gagagagagaaactctctgatcaactatgatgaag-gtgatacaaagaggttacaaaaaattagc 32736989  T
Q  322 ctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagctttttta 421  Q
     || ||| ||| ||||||||||| ||| |||||||| |||||||||| ||   | || ||||| ||||||||||||||||| |||||| |||   ||| |    
T  32736988 ttaaaagttcataaagaacaaaccctaatttctacccatttttcaagtcatcgacactcacaatgaatcctaagagaaaaccctaaaggaag-gatttga 32736890  T
Q  422 tccttcctctaatgaaatctcactac 447  Q
    || |||||||||||| ||||||||||    
T  32736889 tcattcctctaatgagatctcactac 32736864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 433
Target Start/End: Complemental strand, 35109811 - 35109418
Alignment:
Q  27 gtgaattcgaacaataaaa-catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    |||||||||||||| | || || | |||||||||||||||||||  || ||| ||| ||||||||||||  |||||||| |||||||||||||||         
T  35109811 gtgaattcgaacaaaataatcacaccaataaaacttagatgtgtagaggaaaggaagtagtaatcaatg--caaagtagtctcaagcaacaacaa----- 35109719  T
Q  126 gatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtttac 225  Q
     | ||||||||||| |||||   |  ||||||||||  ||||  |||  |||||||| | |||||||||||| | |||||| | | | || || ||||||    
T  35109718 -acagacctagatctaagtgcggaacaacaccacaaacataattaaagaaacaaagagaagaaagaagagaa-agaaacaacacaccgatatt-gtttac 35109622  T
Q  226 gtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctac 325  Q
      |||| |||||||||  |||||| | || |||||||| |  ||||||| |||| | ||||| ||||  |||||||| |||||||||||||||||  ||     
T  35109621 tcagtttggtccaaaat-gacctaatctg-aggagagaca--agctctctgatccactatgataagatagatacaaataggttacaagaaattagcttaa 35109526  T
Q  326 aagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcct 425  Q
    |||||||||||||||||||  || |||||||| | |||||||| ||| || || ||||| |||||||| ||||||| ||||||| |||||||||||||||    
T  35109525 aagctcacaaagaacaaaccttaatttctacccaattttcaagtcacacacactcacaatgaatcctacgagaaaatactaaaggaagcttttttatcct 35109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 289 - 467
Target Start/End: Original strand, 10997028 - 10997209
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaa 388  Q
    |||||||||||||| | ||||||||||||||   || ||| | ||||| ||||||| ||| |||||||| |||||||||| ||| |  || |||   |||    
T  10997028 aagagtgatacaaatatgttacaagaaattaacttaaaagataacaaataacaaaccctaatttctacccatttttcaagtcaccctcactcacgttgaa 10997127  T
Q  389 tcctaagagaaaa-cactaaagaaagctttttt--atccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |||||| |||||| |||||||| ||||||||||  ||| |||||||||||| || |||||| |||||||||||| |||||||    
T  10997128 tcctaaaagaaaaacactaaaggaagcttttttttatcattcctctaatgacatttcactatccaaggtgtttaaaaatgtt 10997209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 293 - 418
Target Start/End: Original strand, 3019806 - 3019931
Alignment:
Q  293 gtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcct 392  Q
    ||||||| ||||||||| |||||||| |  ||||| |||||||||||||   |||| |||||||| |||||||||| |||||||||||| || |||||||    
T  3019806 gtgatacgaagaggttataagaaatttgcttacaaactcacaaagaacattttctaatttctaccaatttttcaagtcactcaaacccaaaatgaatcct 3019905  T
Q  393 aagagaaaacactaaagaaagctttt 418  Q
     | |||||||| ||||||||| ||||    
T  3019906 gatagaaaacaataaagaaagttttt 3019931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 47102767 - 47102691
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||| ||||||| |||||||||||||| ||||||||  | ||||||||||||||||||||||||||||||    
T  47102767 gaatcctaagaaaaaacacaaaagaaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaa 47102691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 15864699 - 15864805
Alignment:
Q  352 tctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaa 451  Q
    |||||| ||||||||| | |||||||||||||| ||||||||||| |||||| || ||||||| |||| ||| || ||||||||| ||||||||||||||    
T  15864699 tctacccatttttcaatc-actcaaacccacaatgaatcctaagaaaaaacaatagagaaagcattttgatcatttctctaatgagatctcactacccaa 15864797  T
Q  452 ggtgttta 459  Q
    | ||||||    
T  15864798 gatgttta 15864805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 455
Target Start/End: Original strand, 2210529 - 2210697
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgattttt-caagccactcaaacccacaaaga 387  Q
    ||||||| || |||||||||||||||||||  |   || ||||||||||| |||||  || |||||| | |||||| ||| |  |||||||||| || ||    
T  2210529 aagagtggtaaaaagaggttacaagaaatttctacccatgctcacaaagatcaaaccttaatttctatccatttttgcaaactgctcaaacccaaaatga 2210628  T
Q  388 atcctaagagaaaacactaaagaaagc-ttttttatccttcctctaatgaaatctcactacccaaggtg 455  Q
    || ||||||||||||| |||||||| | ||||| ||| || ||||||||| ||||||||||||||||||    
T  2210629 attctaagagaaaacaataaagaaaacatttttgatcatttctctaatgagatctcactacccaaggtg 2210697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 486
Target Start/End: Complemental strand, 11031429 - 11031301
Alignment:
Q  359 atttttcaagccactcaaacccacaaagaatcctaagagaaaa-cactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtt 457  Q
    |||||||||| || ||| || ||||| | |||||||||||||| |||||||| ||||||||| ||||||||  |||||||  ||||||||||| ||||||    
T  11031429 atttttcaagtcattcacactcacaatgtatcctaagagaaaaacactaaaggaagctttttgatccttccaataatgaa--ctcactacccacggtgtt 11031332  T
Q  458 tacaaatgtt--ccaactcaagataacctct 486  Q
    ||||||||||  ||||| ||||| |||||||    
T  11031331 tacaaatgtttcccaacccaagagaacctct 11031301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 13598569 - 13598645
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  13598569 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 13598645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 16124442 - 16124366
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  16124442 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 16124366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 40816744 - 40816668
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  40816744 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 40816668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 48591092 - 48591013
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagt 102  Q
    |||||||||||| || ||  || || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  48591092 tgttgtgaattcaaataaataatcacatcaataaaacttagatgtgtgaagtaaaagaaatagtaatcaatgaacaaagt 48591013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 48600787 - 48600708
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagt 102  Q
    |||||||||||| || ||  || || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  48600787 tgttgtgaattcaaataaataatcacatcaataaaacttagatgtgtgaagtaaaagaaatagtaatcaatgaacaaagt 48600708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 218 - 366
Target Start/End: Complemental strand, 11032413 - 11032268
Alignment:
Q  218 ttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaat 317  Q
    |||||||||||||||| |||||||| ||||||||| |||||| ||||  |  || || |||| | ||||| || ||||||| ||||||||||||||||||    
T  11032413 ttgtttacgtagttcg-tccaaaaaggacctacttcggaggatagagcaa--ctatctgatccactatgataatagtgatataaagaggttacaagaaat 11032317  T
Q  318 tagtctacaagctcacaaagaacaaactctattttctaccgatttttca 366  Q
    |||  || || |||||||||||||||   || |||||||| ||||||||    
T  11032316 tagattaaaaactcacaaagaacaaaacataatttctacccatttttca 11032268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 17345805 - 17345704
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgag-caaagtagcctcaagcaacaacaac 121  Q
    ||||||||||||| |||| ||| || | |||| ||||  ||||||||| |||||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  17345805 tgttgtgaattcggacaagaaaccacaccaatgaaacaaagatgtgtggagcaaaggaagtagtaatcaatgagtaaaagtagcctcaagcaacaacaac 17345706  T
Q  122 aa 123  Q
    ||    
T  17345705 aa 17345704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 29651982 - 29652058
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| || |||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  29651982 gaatcctaagagaaaacacaaaaggaaactttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 29652058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 47703863 - 47703787
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||| ||||||||| ||||  |  |||||||||||||||||||||||||||||    
T  47703863 gaatcctaagagaaaacacaaaaggaagtttttttatcattccaatggtgaaatctcactacccaaggtgtttacaa 47703787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 503
Target Start/End: Complemental strand, 25116629 - 25116508
Alignment:
Q  387 aatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactaccc-aaggtgtttacaaatgtt--ccaactca--agataa 481  Q
    |||| |||||||||||||||||||||  ||||| |||||||   ||||||||||||||||||| || |||||||||||||||  ||||| ||  | ||||    
T  25116629 aatcttaagagaaaacactaaagaaatttttttaatccttcaaataatgaaatctcactaccctaatgtgtttacaaatgtttcccaacccaataaataa 25116530  T
Q  482 cctctcacaaaatacactcaac 503  Q
     ||||||||||| |||||||||    
T  25116529 actctcacaaaagacactcaac 25116508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 19073101 - 19073173
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||| |||| ||||||||| ||||||||  |  ||||||||||||| |||||||||||||||    
T  19073101 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaa 19073173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 19120991 - 19121063
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||| |||| ||||||||| ||||||||  |  ||||||||||||| |||||||||||||||    
T  19120991 cctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactatccaaggtgtttacaa 19121063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 47098749 - 47098677
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| ||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  47098749 cctaagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 47098677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 84 - 206
Target Start/End: Original strand, 2210321 - 2210442
Alignment:
Q  84 agtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagat 183  Q
    ||||||||| ||| |||||||  ||||||||||| || |||| || || ||||||| |||||| ||| |||| |  ||||||||||||| |||| |||||    
T  2210321 agtaatcaa-gagtaaagtagtttcaagcaacaaaaataacaaatcgatctagatctaagtgtgaagcaacatcgtaagtataaccaaagcaaccaagat 2210419  T
Q  184 acgaaagaagagaagaaaaacaa 206  Q
    | |||||||||||| || |||||    
T  2210420 aagaaagaagagaaaaacaacaa 2210442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 292 - 448
Target Start/End: Original strand, 37918735 - 37918888
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    ||||||||||||| |||||||||||||||  | |||||||| |||||||   | |||  ||||||| |||||||||| | ||  || |||||| ||||||    
T  37918735 agtgatacaaagatgttacaagaaattagatttcaagctcataaagaac---ccctaaattctacctatttttcaagtcgcttcaatccacaatgaatcc 37918831  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacc 448  Q
    ||||||||||||  | ||||| ||||||  || || | ||||||| | |||||||||    
T  37918832 taagagaaaacaagagagaaaactttttggtcatttccctaatgagaactcactacc 37918888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 22819504 - 22819676
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||   |||||||||||||||  |   ||||||||||||| ||    || |||||| | |||||||||| ||| || || | ||| ||||||    
T  22819504 agtgatacaaatgagttacaagaaattagctttttagctcacaaagaataagacataatttctaaccatttttcaagtcacccacactctcaatgaatcc 22819603  T
Q  392 taagagaaaa--cactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||  ||| |||| ||||||||| ||||||||  |  |||||| | ||||||||||||||||||||    
T  22819604 taagagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatgtaactacccaaggtgtttacaa 22819676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 8281131 - 8281230
Alignment:
Q  21 tatgttgtgaattcgaac-aataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaaca 119  Q
    |||||||||||||| ||| ||||| | ||| ||||| |||||||||||||  |  ||| |||||||||||||||||  ||||||| ||||||||||||||    
T  8281131 tatgttgtgaattcaaactaataata-ataccaatagaacttagatgtgtagattaaaggaaatagtaatcaatgaataaagtagtctcaagcaacaaca 8281229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 9476431 - 9476507
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||| |||| ||||||||| |||||||   |  ||||||||||||||||||| |||||||||    
T  9476431 gaatcttaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctcactacccaagatgtttacaa 9476507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 292 - 458
Target Start/End: Complemental strand, 48382503 - 48382346
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    ||||||||||| ||||||||||||||||   |||||| ||||||||| ||||| ||| |||||          || | ||||| | ||| ||| |||| |    
T  48382503 agtgatacaaataggttacaagaaattaacttacaagttcacaaagatcaaaccctaatttct----------catgtcactctagcccgcaatgaatgc 48382414  T
Q  392 taagagaaaacactaaagaaagctttttt-atccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    ||| |||||||| || | |||| |||||| ||||||||| |||||| |||||||||||||||||||||    
T  48382413 taatagaaaacaatacaaaaagttttttttatccttcctttaatgagatctcactacccaaggtgttt 48382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 462
Target Start/End: Complemental strand, 9022838 - 9022758
Alignment:
Q  380 cacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||||||| |  ||| ||||||||||||||||||  |  ||||||||||||||  |||||||||||||    
T  9022838 cacaatgaatcctaagagaaaactc--aaggaagcttttttatccttccaatggtgaaatctcactacgaaaggtgtttacaa 9022758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 463
Target Start/End: Complemental strand, 6354303 - 6354261
Alignment:
Q  421 atccttcctctaatgaaatctcactacccaaggtgtttacaaa 463  Q
    |||||||||||||||| |||||||||||||| |||||||||||    
T  6354303 atccttcctctaatgagatctcactacccaaagtgtttacaaa 6354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 455
Target Start/End: Complemental strand, 27104329 - 27104260
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtg 455  Q
    ||||| ||||||||||||| |||| ||||||||| || |||||  |  ||||||||||||||||||||||    
T  27104329 gaatcttaagagaaaacacaaaaggaagctttttgattcttccaatggtgaaatctcactacccaaggtg 27104260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 3281881 - 3281952
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  3281881 cctaagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 3281952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 296 - 357
Target Start/End: Complemental strand, 3460778 - 3460715
Alignment:
Q  296 atacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctacc 357  Q
    |||||||  |||||||| |||||||  || ||||||||||||||||||||||||| ||||||||    
T  3460778 atacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttctacc 3460715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 32889609 - 32889683
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||||| ||||||  | ||||||  |  |||||||||||||||||||||||||||||    
T  32889609 gaatcctaagagaaaacacaaaagaa-gcttttgaa-ccttccaatggtgaaatctcactacccaaggtgtttacaa 32889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 4552722 - 4552791
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||| ||||||||||||||||  || |||||||||||||| |||||| ||| |||||||| |||||    
T  4552722 gatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaac-ctaatttctacccatttt 4552791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 41360997 - 41360928
Alignment:
Q  295 gatacaaagaggttacaagaaattagtct--acaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||  ||||||||||||||||| |  ||||||||||||||||||||| ||| |||||||| |||||    
T  41360997 gatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 41360928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 418
Target Start/End: Complemental strand, 17345525 - 17345415
Alignment:
Q  308 tacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaa 407  Q
    |||||||||||||  ||  ||| |||||||||||||  ||| |||||||| |||||| ||| ||| || || |  || ||||| ||||||||||||| ||    
T  17345525 tacaagaaattagcataagagcccacaaagaacaaaacctaatttctacccattttttaagtcacccacactcttaatgaatcttaagagaaaacacaaa 17345426  T
Q  408 agaaagctttt 418  Q
    ||||| |||||    
T  17345425 agaaaactttt 17345415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 425 - 459
Target Start/End: Complemental strand, 19933449 - 19933415
Alignment:
Q  425 ttcctctaatgaaatctcactacccaaggtgttta 459  Q
    |||||||||||||||||| ||||||||||||||||    
T  19933449 ttcctctaatgaaatctctctacccaaggtgttta 19933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 928071 - 928123
Alignment:
Q  305 ggttacaagaaattag--tctacaagctcacaaagaacaaactctattttcta 355  Q
    ||||||||||||||||  || ||||||||||||||||||||| ||| ||||||    
T  928071 ggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 13604542 - 13604474
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  13604542 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 13604474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 19754578 - 19754507
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||||    
T  19754578 gatacaaatcggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttc 19754507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 47255425 - 47255496
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||||    
T  47255425 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttc 47255496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 10996771 - 10996867
Alignment:
Q  24 gttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaa 120  Q
    |||||||||||||||||  || || | |||||||||||| || |||  || |||  || |||||||||||||  ||||||||||||||  |||||||    
T  10996771 gttgtgaattcgaacaaacaatcacaccaataaaacttacatatgtagagtaaagaaagtagtaatcaatgaataaagtagcctcaaggtacaacaa 10996867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 19358721 - 19358693
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  19358721 tgaaatctcactacccaaggtgtttacaa 19358693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 19361310 - 19361282
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  19361310 tgaaatctcactacccaaggtgtttacaa 19361282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 19366186 - 19366158
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  19366186 tgaaatctcactacccaaggtgtttacaa 19366158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 19379950 - 19379922
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  19379950 tgaaatctcactacccaaggtgtttacaa 19379922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 26644821 - 26644750
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||| ||||||||||||||    
T  26644821 cctaagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactactcaaggtgtttacaa 26644750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 47704138 - 47704062
Alignment:
Q  108 caagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagata 184  Q
    |||||| ||||||||| | ||||||||| ||| ||||||  || |||||||||||| ||| |||| ||| |||||||    
T  47704138 caagcagcaacaacaaaaaatagacctaaatctaagtgtagagcaacaccacaagtttaatcaaagcaataaagata 47704062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 284 - 467
Target Start/End: Complemental strand, 102524 - 102341
Alignment:
Q  284 atgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccaca 383  Q
    |||| |||||||||||||||||||||||||||||||   || ||||||||||| ||||||| ||| |||||||| |||||||||| ||| || || || |    
T  102524 atgataagagtgatacaaagaggttacaagaaattatcttaaaagctcacaaaaaacaaaccctaatttctacccatttttcaagtcacacacactcata 102425  T
Q  384 aagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |  ||| | ||||||||||||||||| | ||||||| |||||||||||||| |||||| |||  ||||||||||| ||||||||    
T  102424 ataaattcgaagagaaaacactaaaggatgctttttgatccttcctctaataaaatcttacttaccaaggtgttttcaaatgtt 102341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 272 - 467
Target Start/End: Original strand, 14737 - 14932
Alignment:
Q  272 ctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagcca 371  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||  || ||||||||||||||| ||| ||| || ||||| |||||||||| ||    
T  14737 ctccgatcaattatgataagagtgatacaaagaggttacgagaaattagcttaaaagctcacaaagaactaaccctagttcctacctatttttcaagtca 14836  T
Q  372 ctcaaacccacaaa--gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    | || || ||||||  |||||||||||||||||||||||| |   ||||| || |||||  |||| ||||||||| ||| ||||| ||||||||||||    
T  14837 cccacactcacaaagtgaatcctaagagaaaacactaaagga--gtttttgatgcttccaataataaaatctcaccaccaaaggtatttacaaatgtt 14932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 5817292 - 5817122
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||| |||||||||||||| |  ||  |||||||||||||||||  ||| |||||| | |||||||||| |||||| || | ||| ||||||    
T  5817292 agtgatacaaaggggttacaagaaatttgcataagagctcacaaagaacaaaacctaatttctatccatttttcaagtcactcacactctcaatgaatcc 5817193  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||| |||| ||||||||| ||||||||  |  |||||||||||| |||||||| |||||||    
T  5817192 taagaaaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactccccaaggtatttacaa 5817122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 62 - 367
Target Start/End: Complemental strand, 28617475 - 28617172
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacaga-tagacctagatcaaagtgttaa-gtaacaccac 159  Q
    ||||||||| |||||| ||| | |||||||||||| |||||||||||||| ||||| ||||||| | ||||||||  ||  || || || | ||||||||    
T  28617475 agatgtgtggagcaaaggaagtggtaatcaatgagtaaagtagcctcaagaaacaagaacaacaaaatagacctaagtcttagagtaaaagcaacaccac 28617376  T
Q  160 aagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtttacgtagttcggtccaaaaaagacctactttggagga 259  Q
    ||| |||  |||| ||||||||||| | |||||  ||||||||  || | | |||| || ||||||  |||||||||||| |  |||||||| ||| |||    
T  28617375 aagcatattcaaagcaacaaagataagcaagaaaggaagaaaacaaacacaccaatatt-gtttacccagttcggtccaatat-gacctactctggggga 28617278  T
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga 359  Q
    |||||   |||||||| ||| | || ||  | |||||||||| | ||||||||||||||||  || ||||||||||||||||||  ||| |||||||| |    
T  28617277 gagagc--agctctccaatccactaagatgaaagtgatacaatggggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctaccta 28617180  T
Q  360 tttttcaa 367  Q
    ||||||||    
T  28617179 tttttcaa 28617172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 306 - 462
Target Start/End: Complemental strand, 23403022 - 23402865
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    |||||||||||||||  || ||||| ||||| ||||||   ||| |||||||| ||||||||   |||||| || | ||| |||||||||||||||||||    
T  23403022 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcacatcactcacactctcaatgaatcctaagagaaaacac 23402923  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
     |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  23402922 aaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa 23402865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 306 - 507
Target Start/End: Original strand, 2580478 - 2580680
Alignment:
Q  306 gttacaagaaattagtctacaagctcaca-aagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    ||||||||||| |||  | |||||| ||| ||||||||   ||| |||||||| ||||||||   ||| || || | ||| |||||||||||||||||||    
T  2580478 gttacaagaaaatagcttgcaagcttacacaagaacaagtcctagtttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacac 2580577  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa-atgttccaactcaagataacctctcacaaaatacactcaac 503  Q
     |||| ||||||||| |||||| |  |  |||||||||||||||||||||||||||||  | ||||||| ||||| |||||| ||| ||| |||||||||    
T  2580578 aaaaggaagctttttgatcctttcaatggtgaaatctcactacccaaggtgtttacaatgttttccaacccaagagaacctcacac-aaagacactcaac 2580676  T
Q  504 ccta 507  Q
    ||||    
T  2580677 ccta 2580680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 306 - 462
Target Start/End: Original strand, 20284177 - 20284334
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    |||||||||||||||  || ||||| ||||| ||||||   ||| ||||||||  |||||||   ||| || || | ||| |||||||||||||||||||    
T  20284177 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccttttttcatatcacccacactctcaatgaatcctaagagaaaacac 20284276  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
     |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  20284277 aaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 20284334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 29159974 - 29160050
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  29159974 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgtttacaa 29160050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 296 - 452
Target Start/End: Complemental strand, 4162786 - 4162629
Alignment:
Q  296 atacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaag 395  Q
    |||||||| |||||||||||| |||  | ||| |||||||||||||||   || |||||||  |||||||||| || ||||||||| || ||||| |||     
T  4162786 atacaaagtggttacaagaaagtagattccaa-ctcacaaagaacaaatcataatttctacttatttttcaagtcattcaaacccataatgaatcataac 4162688  T
Q  396 agaaaacac--taaagaaagcttttttatccttcctctaatgaaatctcactacccaag 452  Q
    ||||||||   ||||||||||||||| |||||| ||| ||||| || ||||||||||||    
T  4162687 agaaaacatattaaagaaagctttttcatcctttctcaaatgagatatcactacccaag 4162629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 45685734 - 45685601
Alignment:
Q  325 caagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcc 424  Q
    |||||| |||||||||||||  || |||||| | |||||| ||| ||||||||  | ||| ||||||||||||||||||  |||||||| ||||||||||    
T  45685734 caagctgacaaagaacaaaccttaatttctatccattttttaagtcactcaaagtcgcaatgaatcctaagagaaaacaagaaagaaagtttttttatcc 45685635  T
Q  425 ttcctctaatgaaatctcactacccaaggtgttt 458  Q
    || || | |||| |||| |||| | |||||||||    
T  45685634 tttctttgatgagatctgactatcaaaggtgttt 45685601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 56118 - 56194
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  56118 gaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 56194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 4796596 - 4796520
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  4796596 gaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 4796520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 9185102 - 9185026
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||  ||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  9185102 gaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 9185026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 9189935 - 9189859
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||  ||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  9189935 gaatcctaagagaaaacacacaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 9189859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 458
Target Start/End: Original strand, 49091832 - 49091904
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||    
T  49091832 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgttt 49091904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 326 - 452
Target Start/End: Original strand, 3047364 - 3047489
Alignment:
Q  326 aagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcct 425  Q
    |||||||||||||||||   ||| |||||||| |||||| ||| ||| || || | ||| ||||| ||||| ||||||| |||| ||||||||| |||||    
T  3047364 aagctcacaaagaacaagacctaatttctacccattttt-aagtcacccacactctcaatgaatcttaagataaaacacaaaaggaagctttttgatcct 3047462  T
Q  426 tcctctaatgaaatctcactacccaag 452  Q
    |||  | ||||||||||||||||||||    
T  3047463 tccaatgatgaaatctcactacccaag 3047489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 46516233 - 46516157
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||| |||  ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  46516233 gaatcttaagagaaaacacaaaatgaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 46516157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 5817559 - 5817459
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||||||| ||||  || || |||||||||||  ||||||||||||||||  || || |||||||||  ||||||||| |||| |||||||||||    
T  5817559 tgttgtgaattcgtacaa--aatcacatcaataaaacaaagatgtgtgaagcaaagtaagtattaatcaatggacaaagtagcatcaaacaacaacaaca 5817462  T
Q  123 aca 125  Q
    |||    
T  5817461 aca 5817459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 306 - 462
Target Start/End: Complemental strand, 9235591 - 9235434
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    |||||||||||||||  || ||||| ||||| ||||||   ||| |||||||| ||||||||   ||| |  || | ||| |||||||||||||||||||    
T  9235591 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccgcactctcaacgaatcctaagagaaaacac 9235492  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
     |||| ||||||||| |||||| |  |  |||||| |||||| |||||||||||||||    
T  9235491 aaaaggaagctttttgatccttgcaatggtgaaatatcactatccaaggtgtttacaa 9235434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 33332375 - 33332302
Alignment:
Q  389 tcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||| || | ||||||||| ||||||||  |  ||||||||||||||||||| |||||||||    
T  33332375 tcctaagagaaaacacaaagggaagctttttgatccttccaatggtgaaatctcactacccaagatgtttacaa 33332302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 460
Target Start/End: Original strand, 761225 - 761416
Alignment:
Q  268 agctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaa 367  Q
    |||||||||||| | ||||  | || ||| ||||| ||||||||| |||| ||   | |||||||||||||| |||| ||| |||||||| |||||||||    
T  761225 agctctccgatccactatgtaaggaatgacacaaataggttacaataaatgagctcaaaagctcacaaagaaaaaacactaatttctacccatttttcaa 761324  T
Q  368 gccactcaaacccacaaagaatcct---aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttac 460  Q
    |    ||| || ||||| | |||||   |||||  |||||||||  || |||||| |||||||||||||||| |||||||||| ||| ||| ||||    
T  761325 g----tcatactcacaatgcatcctcctaagaggtaacactaaatgaaactttttgatccttcctctaatgagatctcactactcaaagtgcttac 761416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 122
Target Start/End: Complemental strand, 8141022 - 8140922
Alignment:
Q  23 tgttgtgaattcgaacaataaaac-atatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    ||||||||||||||||  |||||  | | |||||||||| ||||||||| |||||||||| ||||||||||  || ||||||| || || ||||||||||    
T  8141022 tgttgtgaattcgaacggtaaaattacaccaataaaactaagatgtgtggagcaaaagaagtagtaatcaaatagaaaagtagtcttaaacaacaacaac 8140923  T
Q  122 a 122  Q
    |    
T  8140922 a 8140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 35960986 - 35961062
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||| | |||| ||||||||| ||||||||  |  ||||||||||||||| |||||||||||||    
T  35960986 gaatcttaagagaaaacgcaaaaggaagctttttgatccttccaatggtgaaatctcactacctaaggtgtttacaa 35961062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 386 - 460
Target Start/End: Complemental strand, 2647625 - 2647551
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttac 460  Q
    ||||||||||||||||||| |||  ||| ||||| ||||||||  |  |||||||||||||||||||||| ||||    
T  2647625 gaatcctaagagaaaacacaaaatgaagttttttgatccttccaatggtgaaatctcactacccaaggtgcttac 2647551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 31151335 - 31151265
Alignment:
Q  127 atagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaa 197  Q
    ||||||||| ||  |||||| |||||| |||||||| ||||||||||||||||||||| || || ||||||    
T  31151335 atagacctaaatttaagtgtaaagtaaaaccacaagaataaccaaaacaacaaagataagagagtagagaa 31151265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 31169623 - 31169553
Alignment:
Q  127 atagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaa 197  Q
    ||||||||| ||  |||||| |||||| |||||||| ||||||||||||||||||||| || || ||||||    
T  31169623 atagacctaaatttaagtgtaaagtaaaaccacaagaataaccaaaacaacaaagataagagagtagagaa 31169553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 361 - 426
Target Start/End: Complemental strand, 23580868 - 23580804
Alignment:
Q  361 ttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcctt 426  Q
    |||||||| ||||||||||||||| | ||| |||||||||||| ||||||||  ||||||||||||    
T  23580868 ttttcaagtcactcaaacccacaatggatcataagagaaaacaataaagaaa-tttttttatcctt 23580804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 184
Target Start/End: Original strand, 2580237 - 2580358
Alignment:
Q  62 agatgtgtgaagcaaaagaaa-tagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccaca 160  Q
    ||||||||| |||||||| || | |||||||||| | |||||  | ||||||||||||||||| | |  |||||| ||| ||||||  ||  ||||||||    
T  2580237 agatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtcttcaagcaacaacaacaaaaca--gacctaaatctaagtgtagagatacaccaca 2580334  T
Q  161 agtataaccaaaacaacaaagata 184  Q
    |||||||||||| ||| |||||||    
T  2580335 agtataaccaaagcaataaagata 2580358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 306 - 355
Target Start/End: Original strand, 22328487 - 22328538
Alignment:
Q  306 gttacaagaaattag--tctacaagctcacaaagaacaaactctattttcta 355  Q
    |||||||||||||||  || ||||||||||||||||||||||||| ||||||    
T  22328487 gttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttcta 22328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 41649096 - 41649166
Alignment:
Q  295 gatacaaagaggttacaagaaattag-tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  |||||||||||||||| |  ||||||||||||||||||||| ||| |||||||| |||||||    
T  41649096 gatacaaatgggttacaagaaattagctaaacaagctcacaaagaacaaac-ctaatttctaccaatttttc 41649166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 192 - 381
Target Start/End: Complemental strand, 22835772 - 22835585
Alignment:
Q  192 agagaagaaaaacaatagatcaatgtttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaag 291  Q
    |||| ||| |||||| | |||||| ||||||||| || ||||| ||||||| ||||||| || | ||| |||||||| | |||| ||| | ||| | | |    
T  22835772 agagtagagaaacaacatatcaatatttgtttacctaattcgg-ccaaaaatgacctacgtttgggga-agagagaaaccctccaatccaatataaaatg 22835675  T
Q  292 agtgatacaaagaggttacaagaaattag-tctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaaccca 381  Q
    ||||||||||||||  ||||| || |||| |||   ||||||||| |||||| ||||| |||||| | |||||||||  ||||||||||||    
T  22835674 agtgatacaaagagactacaaaaagttagatctgagagctcacaa-gaacaatctctaatttctatccatttttcaattcactcaaaccca 22835585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 27984294 - 27984399
Alignment:
Q  23 tgttgtgaattcgaacaa-taaaacatatcaataaaacttagatgtgtgaagcaaaagaaatag--taatcaatgagcaaagtagcctcaagcaacaaca 119  Q
    |||||||||||| ||||| |||| || |||||||||||||| |||| || |||||| ||| |||  ||||||||||  ||||||| || ||||||| | |    
T  27984294 tgttgtgaattcaaacaaataaatcacatcaataaaacttatatgtttggagcaaaggaattagtataatcaatgaataaagtagtcttaagcaacgata 27984393  T
Q  120 acaaca 125  Q
    ||||||    
T  27984394 acaaca 27984399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 2390365 - 2390294
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||||    
T  2390365 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttc 2390294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 21983463 - 21983531
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||| |||| |||||| |  ||||||||  |  |||||||||||||||||||||||||||||    
T  21983463 aagagaaaacacaaaaggaagcttatg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 21983531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 2479553 - 2479581
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  2479553 tgaaatctcactacccaaggtgtttacaa 2479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 9185410 - 9185289
Alignment:
Q  62 agatgtgtgaagcaaaagaaa-tagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccaca 160  Q
    ||||||||| |||||||| || | |||||||||| | |||||  |  |||||||||||||||| | |  |||||||||| ||||||  || |||||||||    
T  9185410 agatgtgtggagcaaaaggaagtggtaatcaatgtgtaaagtgtctccaagcaacaacaacaaaaca--gacctagatctaagtgtagagaaacaccaca 9185313  T
Q  161 agtataaccaaaacaacaaagata 184  Q
    || |||| |||| ||| |||||||    
T  9185312 agcataaacaaagcaataaagata 9185289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 18408981 - 18409009
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  18408981 tgaaatctcactacccaaggtgtttacaa 18409009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 21640027 - 21640055
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  21640027 tgaaatctcactacccaaggtgtttacaa 21640055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 21646225 - 21646253
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  21646225 tgaaatctcactacccaaggtgtttacaa 21646253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 260 - 458
Target Start/End: Complemental strand, 33503896 - 33503697
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatac-aaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccg 358  Q
    ||||||| |||||| | ||| | ||||| | ||||||||| |||||||||| ||||||||||   |||||| | ||||| ||||   ||| ||||||||     
T  33503896 gagagagcagctcttcaatccactatgaaatgagtgataccaaagaggttaaaagaaattagctcacaagccctcaaagcacaatacctaatttctaccc 33503797  T
Q  359 atttttcaagccactcaaacccacaaaga-atcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtt 457  Q
    |||||||||| |||||||||||||| ||| ||||||||||||  ||  | ||||| ||||||||| ||||||||||||| ||||||||||||||||||||    
T  33503796 atttttcaagtcactcaaacccacatagagatcctaagagaat-caagagagaaaacttttttattcttcctctaatgagatctcactacccaaggtgtt 33503698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 292 - 462
Target Start/End: Complemental strand, 7493195 - 7493025
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    ||||||||||||| |||| |||||||||   || ||||||||| ||||||||  ||| ||||||||  ||||||||| ||| || || | |||  |||||    
T  7493195 agtgatacaaagaagttataagaaattaacataaaagctcacacagaacaaaacctaatttctacctgtttttcaagtcacccacactctcaataaatcc 7493096  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| |||||||||||| ||||||||| |||||||   |  |||||||||||||||||||||||||||||    
T  7493095 taagaaaaaacactaaaggaagctttttgatccttctaattgtgaaatctcactacccaaggtgtttacaa 7493025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 292 - 403
Target Start/End: Complemental strand, 9054859 - 9054748
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||| ||||||||||||||||  || |||| ||||||||||||| |||| |||||||| |||||||||| |||||| || | ||| ||||||    
T  9054859 agtgatacaaagtggttacaagaaattagcttaaaagcgcacaaagaacaaaatctaatttctacccatttttcaagtcactcacactctcaatgaatcc 9054760  T
Q  392 taagagaaaaca 403  Q
    ||||||||||||    
T  9054759 taagagaaaaca 9054748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 330 - 467
Target Start/End: Complemental strand, 31513314 - 31513180
Alignment:
Q  330 tcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcct 429  Q
    ||||||||||||||| ||| |||||||| ||||| | || ||  || || ||||| |||||||||||||||||||||||||    |||||||||||||||    
T  31513314 tcacaaagaacaaac-ctaatttctacctatttt-cgagtcatccacactcacaatgaatcctaagagaaaacactaaagattt-ttttttatccttcct 31513218  T
Q  430 ctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |||||||||||||||||  |||||||||||||||||||    
T  31513217 ctaatgaaatctcactattcaaggtgtttacaaatgtt 31513180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 292 - 462
Target Start/End: Original strand, 3051195 - 3051365
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||   |||||||||||||||  ||  |||||||||||||||||   || |||||||| |||||||| | |||| | || | ||| ||||||    
T  3051195 agtgatacaaatgagttacaagaaattagcataagagctcacaaagaacaaaacttaatttctacccatttttcatgtcacttacactctcaatgaatcc 3051294  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||| ||| |||| ||||||||| ||| ||||  |  ||||||||||||||||||| |||||||||    
T  3051295 taagagaaagcacaaaaggaagctttttgatctttccaatggtgaaatctcactacccaagatgtttacaa 3051365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 305 - 462
Target Start/End: Original strand, 28307649 - 28307807
Alignment:
Q  305 ggttacaagaaattagtct-acaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaaca 403  Q
    ||||||||||||||||| | | ||||||| |||||||||   ||| |||||||  |||| ||||| ||| || || | ||  ||||||||| ||||||||    
T  28307649 ggttacaagaaattagttttaaaagctcataaagaacaagacctactttctacacatttctcaagtcacccacactctcactgaatcctaaaagaaaaca 28307748  T
Q  404 ctaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    | |||||||||||||||||||||||  |  |||||||||||||||||||||||| ||||    
T  28307749 caaaagaaagcttttttatccttccaattgtgaaatctcactacccaaggtgttaacaa 28307807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 294 - 459
Target Start/End: Original strand, 14601240 - 14601405
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatccta 393  Q
    |||||||||||||||||| ||||||||  || |||| ||||||||||  |  ||| ||| |||| |||||||||| ||||||||| ||| | ||||||||    
T  14601240 tgatacaaagaggttacacgaaattagcgtataagcccacaaagaacgtatcctaatttttacctatttttcaagtcactcaaacgcacgatgaatccta 14601339  T
Q  394 agagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttta 459  Q
     ||||||||| ||||||||||||||  ||  || ||||||| | |||||| || |||| |||||||    
T  14601340 tgagaaaacaataaagaaagcttttagattatttctctaataagatctcattagccaatgtgttta 14601405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 291 - 408
Target Start/End: Complemental strand, 34477242 - 34477128
Alignment:
Q  291 gagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    ||||||||||||||||||| |||||||||   ||||| ||||||||||||||   ||| |||| ||| |||||||||| |||||||| |||||| |||||    
T  34477242 gagtgatacaaagaggttaaaagaaattaacttacaaactcacaaagaacaa---ctaatttcgacccatttttcaagtcactcaaatccacaatgaatc 34477146  T
Q  391 ctaagagaaaacactaaa 408  Q
    | ||||||||||| ||||    
T  34477145 caaagagaaaacaataaa 34477128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 292 - 419
Target Start/End: Complemental strand, 5990583 - 5990456
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaaca--aactctattttctaccgatttttcaagccactcaaacccacaaagaat 389  Q
    ||||||||||||| |||||||||||||||  || ||||||||||||||||  | ||| |||||| ||| |||||||||| ||| || ||   ||| ||||    
T  5990583 agtgatacaaagatgttacaagaaattagcttaaaagctcacaaagaacacgacctc-attttc-acccatttttcaagtcacccacactttcaatgaat 5990486  T
Q  390 cctaagagaaaacactaaagaaagcttttt 419  Q
    ||||||||||||||||||||||||||||||    
T  5990485 cctaagagaaaacactaaagaaagcttttt 5990456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 19752321 - 19752246
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  | ||||||||||||||||||||||||||||||    
T  19752321 gaatcctaagagaaaacac-aaaggaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaa 19752246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 289 - 467
Target Start/End: Complemental strand, 8863649 - 8863476
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-ga 387  Q
    |||||||||||||||||||||||||||||||   || ||||||||  |||||||||  || |||||||| |||||||||| |||||| || || ||| ||    
T  8863649 aagagtgatacaaagaggttacaagaaattaacttaaaagctcac--agaacaaaccttaatttctacccatttttcaagtcactcacacacataaatga 8863552  T
Q  388 atcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |||  ||||||||||| ||||| |||  |||| |||||     |||||||||||||||| |||| |||||||||| ||||    
T  8863551 atctaaagagaaaacattaaaggaag-attttaatcct---aataatgaaatctcactaaccaatgtgtttacaactgtt 8863476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 4696536 - 4696460
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  4696536 gaatcctaagagaaaacacaaaaggaagctttttgatctttccaatggtgaaatctcactacccaaggtgtttacaa 4696460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 6127392 - 6127468
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |  ||||||||||||||||||  |||||||||    
T  6127392 gaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaaatgtttacaa 6127468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 26403157 - 26403081
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  26403157 gaatcataagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 26403081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 341
Target Start/End: Original strand, 11772007 - 11772065
Alignment:
Q  283 tatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaaca 341  Q
    ||||| ||||||||||||||||||||| ||||||||||| |||||| ||||||||||||    
T  11772007 tatgataagagtgatacaaagaggttaaaagaaattagtttacaagttcacaaagaaca 11772065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 292 - 375
Target Start/End: Original strand, 6813758 - 6813842
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactct-attttctaccgatttttcaagccactca 375  Q
    ||||| |||||| ||||||||||||||||  | |||||||||||||||||||  || |||||||||| |||||||||| ||||||    
T  6813758 agtgacacaaaggggttacaagaaattagcttgcaagctcacaaagaacaaaacctaattttctacccatttttcaagtcactca 6813842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 24261916 - 24262008
Alignment:
Q  354 taccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcacta 446  Q
    |||| |||||| ||| |||||||| ||| || ||||| |||||||||||| ||||||||| ||||  |||||| ||||||||| |||||||||    
T  24261916 tacccattttttaagtcactcaaatccaaaatgaatcataagagaaaacaataaagaaagtttttggatccttactctaatgagatctcacta 24262008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 297 - 458
Target Start/End: Original strand, 37021017 - 37021182
Alignment:
Q  297 tacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaaga 396  Q
    |||||||||| |||||||||||||   |||| ||||| ||||| ||||  || ||||||||  ||| ||||| || |||||| ||||| |||||||| ||    
T  37021017 tacaaagaggatacaagaaattagatcacaatctcacgaagaataaaccataatttctaccattttgtcaagtcagtcaaactcacaatgaatcctatga 37021116  T
Q  397 g----aaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
         ||||||  | ||| ||||||| |||| ||||||||||||||||| |||| |||||||||||    
T  37021117 tgagaaaaacaggagagatagcttttctatctttcctctaatgaaatcttactatccaaggtgttt 37021182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 5702409 - 5702332
Alignment:
Q  386 gaatcctaagagaaaa-cactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||| ||| |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  5702409 gaatcctaagagaaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa 5702332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 23799504 - 23799428
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||||||| |||| ||||||||| ||||||||  |  ||||||||| |||| ||||||||||||||    
T  23799504 gaatcctaagggaaaacacaaaaggaagctttttgatccttccaatggtgaaatctccctactcaaggtgtttacaa 23799428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 49 - 146
Target Start/End: Complemental strand, 5990819 - 5990725
Alignment:
Q  49 atcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgt 146  Q
    |||||||||||  ||||||| | |||||| ||| ||||||||||||   |||||||| |||||||||||||||||   ||||||||| ||| ||||||    
T  5990819 atcaataaaacaaagatgtgcggagcaaaggaagtagtaatcaatggataaagtagcatcaagcaacaacaacaa---atagacctaaatctaagtgt 5990725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 7493352 - 7493252
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||||||| ||||  || || | ||||||||||  |||||||| |||||| ||| |||||||||||| | ||||||| |||||||| || |||||    
T  7493352 tgttgtgaattcggacaa--aatcacaccaataaaactatgatgtgtggagcaaaggaagtagtaatcaatgtgtaaagtagtctcaagcagcagcaaca 7493255  T
Q  123 aca 125  Q
    |||    
T  7493254 aca 7493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 14427830 - 14427727
Alignment:
Q  23 tgttgtgaattcgaacaataaaa-catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    ||||||||||| ||||||||||| || | |||  ||||||||||||||| ||||||  ||||  |||| || ||||||||||| ||||| |||||| |||    
T  14427830 tgttgtgaatttgaacaataaaatcagaccaacgaaacttagatgtgtggagcaaagaaaattctaataaaagagcaaagtagtctcaaacaacaataac 14427731  T
Q  122 aaca 125  Q
    ||||    
T  14427730 aaca 14427727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 294 - 382
Target Start/End: Original strand, 32916477 - 32916566
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga-tttttcaagccactcaaacccac 382  Q
    |||| ||||||||||| ||||||||| | |||| |||||||||||||| | |||| || ||||| | ||||||||  |||||||||||||    
T  32916477 tgatccaaagaggttagaagaaattaatttacatgctcacaaagaacatattctaattcctacccattttttcaattcactcaaacccac 32916566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 6366649 - 6366733
Alignment:
Q  361 ttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcact 445  Q
    |||||||  |||||||||  |||| |||||||||||||||||| |||| ||| | |||| ||||||  |||||||| ||||||||    
T  6366649 ttttcaattcactcaaactaacaatgaatcctaagagaaaacaataaaaaaaacgttttgatcctttttctaatgagatctcact 6366733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 19175677 - 19175606
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| || |||||  ||||||||  || |||||||||||||||||||||||||||||    
T  19175677 cctaagagaagacacaaaaggaaacttttg-atccttccaatagtgaaatctcactacccaaggtgtttacaa 19175606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 13864043 - 13863940
Alignment:
Q  23 tgttgtgaattcgaacaataaaa-catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaac 121  Q
    ||||||||||| ||||||||||| || | |||  |||||||||||| || ||||||  ||||  |||| || ||| ||||||| ||||| ||||||||||    
T  13864043 tgttgtgaatttgaacaataaaatcagaccaacgaaacttagatgtttggagcaaagaaaattttaataaaagagtaaagtagtctcaaacaacaacaac 13863944  T
Q  122 aaca 125  Q
    ||||    
T  13863943 aaca 13863940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 19491784 - 19491853
Alignment:
Q  295 gatacaaagaggttacaagaaattagtct--acaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||  ||||||||||||||||| |  ||||||||||||||||||||| ||| |||||||| |||||    
T  19491784 gatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 19491853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 28307432 - 28307495
Alignment:
Q  83 tagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgt 146  Q
    ||||||||||||||  ||||||||||||| ||| ||||||||| ||| ||||| ||| ||||||    
T  28307432 tagtaatcaatgagtcaagtagcctcaagtaacgacaacaacaaataaacctaaatctaagtgt 28307495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 403
Target Start/End: Original strand, 28388061 - 28388171
Alignment:
Q  294 tgatacaaagaggttacaagaaattag-tctacaagctcacaaagaacaaact-ctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||  ||||   |||||||||| | |||||||| |||| ||| |||  | ||||||    
T  28388061 tgatacaaagaggttacaagaaattagatct-caaactcacaaagaaataactaaaattttctacctaattttcaagtcacttaaatccatgatgaatcc 28388159  T
Q  392 taagagaaaaca 403  Q
    |||| |||||||    
T  28388160 taagtgaaaaca 28388171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 292 - 363
Target Start/End: Complemental strand, 30291693 - 30291620
Alignment:
Q  292 agtgatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||||||   |||||||||||||||  || ||||||||||||||||||||  ||| |||||||| |||||    
T  30291693 agtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccatttt 30291620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 18141906 - 18141854
Alignment:
Q  292 agtgatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaa 342  Q
    |||||||||||  ||||||||||||||||  || |||||||||||||||||||    
T  18141906 agtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 18141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 458
Target Start/End: Complemental strand, 34477109 - 34477068
Alignment:
Q  417 ttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    |||||||||| ||| ||||||||||||||| |||||||||||    
T  34477109 ttttatcctttctccaatgaaatctcactatccaaggtgttt 34477068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Original strand, 42435076 - 42435147
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||||    
T  42435076 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttttc 42435147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 1292559 - 1292617
Alignment:
Q  306 gttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||||||||||  || |||||||||||||||||||||| || |||||||| |||||    
T  1292559 gttacaagaaattagcttcaacaagctcacaaagaacaaact-taatttctacccatttt 1292617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 4456245 - 4456273
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  4456245 tgaaatctcactacccaaggtgtttacaa 4456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 7412557 - 7412585
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  7412557 tgaaatctcactacccaaggtgtttacaa 7412585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 7444620 - 7444688
Alignment:
Q  56 aaacttagatgtgtgaagcaaaagaaa-tagtaatcaatgagcaaagtagcctcaagcaacaacaacaa 123  Q
    ||||||| || |||| ||||||| ||| ||||||||||| | || |||||| |||||||||||||||||    
T  7444620 aaacttacatttgtggagcaaaataaagtagtaatcaataatcatagtagcttcaagcaacaacaacaa 7444688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 13204663 - 13204635
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  13204663 tgaaatctcactacccaaggtgtttacaa 13204635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 26288109 - 26288137
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  26288109 tgaaatctcactacccaaggtgtttacaa 26288137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 26301366 - 26301394
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  26301366 tgaaatctcactacccaaggtgtttacaa 26301394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 26313360 - 26313388
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  26313360 tgaaatctcactacccaaggtgtttacaa 26313388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 31071107 - 31071079
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  31071107 tgaaatctcactacccaaggtgtttacaa 31071079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 40328851 - 40328793
Alignment:
Q  306 gttacaagaaattagtcta--caagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||||||||||| ||  |||||||||||||||||||| ||| |||||||| |||||    
T  40328851 gttacaagaaattagtttaaacaagctcacaaagaacaaac-ctaatttctacccatttt 40328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 34482012 - 34482185
Alignment:
Q  24 gttgtgaattcgaacaataaaa-catatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    |||||||||||||||||||||| || | ||| ||| ||||||||||||  ||||| |||  | |||||||||||||||||||  |||||||||| |||||    
T  34482012 gttgtgaattcgaacaataaaatcacaccaacaaatcttagatgtgtggggcaaaggaagga-taatcaatgagcaaagtagtttcaagcaacatcaaca 34482110  T
Q  123 acagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaa 197  Q
    ||| | |||||||||||||||||| ||||||||||||    ||||||||| |||| |||||| ||| ||| ||||    
T  34482111 acaaacagacctagatcaaagtgtgaagtaacaccacgtacataaccaaagcaaccaagataagaaggaaaagaa 34482185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 291 - 458
Target Start/End: Complemental strand, 41163259 - 41163092
Alignment:
Q  291 gagtgatacaaagaggttacaagaaattag-tctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaaga-a 388  Q
    |||||||||||||||||| ||| ||||||| || | ||||||| ||||||||||| ||| |||| ||| | || ||||| |||||||||||||| ||| |    
T  41163259 gagtgatacaaagaggttccaaaaaattagatccaaaagctcataaagaacaaaccctaatttcgacccagttatcaagtcactcaaacccacatagaga 41163160  T
Q  389 tcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    |||| ||||||||||  | |||||||  |||  ||||||||||||||| |||||| ||| ||||||||||    
T  41163159 tcctgagagaaaacaagagagaaagc--tttggtccttcctctaatgagatctcaatactcaaggtgttt 41163092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 3715919 - 3715843
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||||||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  3715919 gaatcctaagagaaaacacaaaagaaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 3715843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 292 - 507
Target Start/End: Complemental strand, 5366336 - 5366115
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatc 390  Q
    ||||||||||||||||||||||||||||   || || ||||||| ||| |||   || ||||||||  |||||| || ||| || ||  | ||| |||||    
T  5366336 agtgatacaaagaggttacaagaaattatcttaaaatctcacaatgaaaaaatcttaatttctacccttttttctagtcacccacactaataaatgaatc 5366237  T
Q  391 ctaagagaaaacactaaagaaagcttttttatccttcctctaat-gaaatctcactacccaaggtgtttacaaatg--ttccaactcaag--ataacctc 485  Q
    ||||| ||||||||||||| || |||||  ||||||||  | || ||||||| |||||||||||||||||||||||  ||||||||||||  |||| |||    
T  5366236 ctaagcgaaaacactaaaggaaacttttcgatccttccaattattgaaatcttactacccaaggtgtttacaaatgttttccaactcaagaaataaactc 5366137  T
Q  486 tcacaaaatacactcaacccta 507  Q
    |||| ||| || ||||||||||    
T  5366136 tcaccaaagactctcaacccta 5366115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 202
Target Start/End: Original strand, 21156272 - 21156419
Alignment:
Q  55 aaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaac 154  Q
    ||||||||| || |||||||||| ||| |||||||||||||| ||||||| || ||||||||| || |||| | | ||||||||| ||| || ||  |||    
T  21156272 aaaacttaggtgagtgaagcaaatgaagtagtaatcaatgagtaaagtagtcttaagcaacaaaaataacaaacaaacctagatctaagagtgaaacaac 21156371  T
Q  155 accacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaa 202  Q
    |||| ||| |||  |||| ||||||||||| |||||||| ||||||||    
T  21156372 accataagaatattcaaagcaacaaagataagaaagaagggaagaaaa 21156419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 260 - 462
Target Start/End: Complemental strand, 40592826 - 40592623
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcaca-aagaacaaactctattttctaccg 358  Q
    |||||||||||||||| ||| | |||||  | |||| ||||||   |||||||||||||||  |||||||| ||| ||||||||| |||| ||||||||     
T  40592826 gagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaaaatctaatttctaccc 40592727  T
Q  359 atttttcaagccactcaaacccacaaa--gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgt 456  Q
    |||||    | ||| ||  | |||||   ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||    
T  40592726 attttgt--gtcacccactctcacaatatgaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgt 40592629  T
Q  457 ttacaa 462  Q
    ||||||    
T  40592628 ttacaa 40592623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 289 - 451
Target Start/End: Complemental strand, 44658508 - 44658345
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaa 388  Q
    |||||||||||||| | ||||||| |||||||   || | ||||||||||| | | |||| |||||| |  | ||||||| |||||||||||||||  ||    
T  44658508 aagagtgatacaaaaatgttacaataaattagctcactaactcacaaagaagatattctaatttctatctgtatttcaagtcactcaaacccacaattaa 44658409  T
Q  389 tcctaagagaaaacactaaagaaag-cttttttatccttcctctaatgaaatctcactacccaa 451  Q
    ||| ||||||||| | |||||||||  |||||||||||| ||||||||| ||||||| ||||||    
T  44658408 tcccaagagaaaataataaagaaagatttttttatcctttctctaatgagatctcaccacccaa 44658345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 289 - 427
Target Start/End: Original strand, 29100232 - 29100371
Alignment:
Q  289 aagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-ga 387  Q
    ||||||||||||||||||||| ||||||||||  || || |||||||||||||||| ||| |||||||   ||||||||| |||  | || || ||| ||    
T  29100232 aagagtgatacaaagaggttataagaaattagcttaaaaactcacaaagaacaaaccctaatttctactcgtttttcaagtcacctacactcataaatga 29100331  T
Q  388 atcctaagagaaaacactaaagaaagcttttttatccttc 427  Q
    ||| ||||||| || ||||||| || ||||||||||||||    
T  29100332 atcataagagataatactaaaggaaacttttttatccttc 29100371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 306 - 462
Target Start/End: Complemental strand, 3328355 - 3328198
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaa-gaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    |||||||||||||||  || ||||| ||||| ||||||   ||| |||||||| ||||||||   ||| || || | ||| | |||||||||||||||||    
T  3328355 gttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttttcatatcacccacactctcaatgtatcctaagagaaaacac 3328256  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
     |||| ||| ||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  3328255 aaaaggaagttttttgatccttccaatgctgaaatctcactacccaaggtgtttacaa 3328198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 292 - 460
Target Start/End: Original strand, 21353637 - 21353806
Alignment:
Q  292 agtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||   |||||||||||||||   |  ||||||||||||||| |  ||| |||||||| |||||||| |||||||| ||  |||| |||||     
T  21353637 agtgatacaaatgagttacaagaaattagcacaagagctcacaaagaacacaacctaatttctacccatttttcatgccactcacacttacaatgaatct 21353736  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatga-aatctcactacccaaggtgtttac 460  Q
    |||||||||||||||||| || |||||  ||||||||  |  ||| | ||||||||||||| ||||||||    
T  21353737 taagagaaaacactaaaggaaacttttggatccttccaatggtgacattctcactacccaaagtgtttac 21353806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 1736221 - 1736145
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  1736221 gaatcctaagagaaaacacaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 1736145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 8126799 - 8126875
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||| ||||||||||||| |||  ||||||||| ||||||||  | ||||||||||||||||||||||||||||||    
T  8126799 gaatcttaagagaaaacacaaaaagaagctttttgatccttccaatgatgaaatctcactacccaaggtgtttacaa 8126875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 18552802 - 18552726
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||| ||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  18552802 gaatcctaagagaaaacacaaaaggaagttttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 18552726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 47923821 - 47923745
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||| |||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  47923821 gaatcctacgagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 47923745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 48438385 - 48438461
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  48438385 gaatcctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa 48438461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 461
Target Start/End: Original strand, 25795949 - 25796024
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttaca 461  Q
    ||||||||||||||||||  |||| ||||||||| ||||||||  |  ||||||||||||||||||||||||||||    
T  25795949 gaatcctaagagaaaacataaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttaca 25796024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 507
Target Start/End: Complemental strand, 1417408 - 1417286
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt--ccaactcaagataacc 483  Q
    ||||||||||||||||||| ||||||| |||||| |||||| |  |  ||||||||||||||| || |||||||| ||||||  ||||| ||||||||||    
T  1417408 gaatcctaagagaaaacacaaaagaaaactttttgatcctttcaatggtgaaatctcactacctaaagtgtttac-aatgtttcccaacccaagataacc 1417310  T
Q  484 tctcacaaaatacactcaacccta 507  Q
    || |   ||| |||||||||||||    
T  1417309 tcactacaaagacactcaacccta 1417286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 3323608 - 3323532
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||| |||||||||||||| |||| ||||||||| ||| ||||  |  |||||||||||||||||||||||||||||    
T  3323608 gaattctaagagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcactacccaaggtgtttacaa 3323532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 4386971 - 4386863
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga 359  Q
    ||||||| |||||||| ||| | || || || |||||||||||  ||||||||||||||||  || ||||||||||||||||||  ||| |||||||  |    
T  4386971 gagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcacaaagaacaaaacctaatttctactca 4386872  T
Q  360 tttttcaag 368  Q
    |||||||||    
T  4386871 tttttcaag 4386863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 271 - 383
Target Start/End: Original strand, 5797194 - 5797305
Alignment:
Q  271 tctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagcc 370  Q
    ||||| ||||| ||||| || |||||||||| ||||||||||||||||||  | ||| |||||||| ||||||||||| |||||  | |||||||||| |    
T  5797194 tctccaatctactatgaaaatagtgatacaa-gaggttacaagaaattagattccaaactcacaaataacaaactctaatttctttccatttttcaagtc 5797292  T
Q  371 actcaaacccaca 383  Q
    ||| |||| ||||    
T  5797293 acttaaactcaca 5797305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 30709706 - 30709630
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||| ||| ||| ||||  | ||||||||||||| ||||||||||||||||    
T  30709706 gaatcctaagagaaaacacaaaaggaagctatttgatcattccaatgatgaaatctcactccccaaggtgtttacaa 30709630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 35925648 - 35925723
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  35925648 gaatcctaagagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 35925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 36029263 - 36029338
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  36029263 gaatcctaagagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 36029338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 47649739 - 47649815
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| |||||||   |  |||||||| ||||||||||||||||||||    
T  47649739 gaatcctaagagaaaacacaaaaggaagctttttgatccttcaaatggtgaaatctaactacccaaggtgtttacaa 47649815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 507
Target Start/End: Complemental strand, 25929320 - 25929191
Alignment:
Q  380 cacaaagaatcctaagagaaaacactaaagaa--agcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa-atgttccaactcaa 476  Q
    ||||| ||||||||||||||||||| ||| ||  |||||||| ||||||||  |  |||||||||||||||||| ||||||||||  | |||||||||||    
T  25929320 cacaatgaatcctaagagaaaacacaaaaaaagaagctttttgatccttccgatggtgaaatctcactacccaa-gtgtttacaatgttttccaactcaa 25929222  T
Q  477 gataacctctcacaaaatacactcaacccta 507  Q
    || |||||| |   ||| |||||||||||||    
T  25929221 gagaacctcactacaaagacactcaacccta 25929191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 294 - 467
Target Start/End: Original strand, 21156506 - 21156679
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatcct 392  Q
    |||||||||||| ||| || |||||||  || ||| |||||||||||||| |||  |||||| | |||||| ||| ||   | || || ||| || ||||    
T  21156506 tgatacaaagagattaaaaaaaattagcttaaaagttcacaaagaacaaaatcttatttctatccattttt-aagtcataaacactcataaatgattcct 21156604  T
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    ||||||||||||||||| ||||||||| ||| || |  ||||||||||||| || | ||||||||||| ||||||    
T  21156605 aagagaaaacactaaagcaagctttttgatcttttcaataatgaaatctcattaactaaggtgtttaccaatgtt 21156679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 83 - 368
Target Start/End: Original strand, 25516851 - 25517133
Alignment:
Q  83 tagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaaga 182  Q
    ||||||||||| || ||||||| |||||  ||||||||||| | |||||| |||||| |||||| ||  ||||||||||  |||   |||  ||||| ||    
T  25516851 tagtaatcaataagtaaagtagtctcaaataacaacaacaaaaaatagacttagatcgaagtgtgaaacaacaccacaaacatatttaaagtaacaagga 25516950  T
Q  183 tacgaaagaagagaagaaaaacaatagatcaatgtttgtttacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctat 282  Q
    || ||||||||||| | ||||||| | | ||||  | ||||||  |||||| || ||||| || | ||||||   ||||||||  | |||||  || |||    
T  25516951 taagaaagaagagagggaaaacaacacaccaatagt-gtttacccagttcgatctaaaaatgatcaactttga--gagagagaacaactctctaatttat 25517047  T
Q  283 tatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaag 368  Q
    | ||| |||| ||||| |   |||||| ||||||||||  || ||||||||||||||||||| ||| |||||||  ||||||||||    
T  25517048 tgtgataagaatgataaatttaggttataagaaattagcttaaaagctcacaaagaacaaaccctaatttctacttatttttcaag 25517133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 184
Target Start/End: Original strand, 48438065 - 48438185
Alignment:
Q  63 gatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaag 162  Q
    |||||||| |||||| ||||| |||||||||    |||||| |  |||||||||||||||| | | ||||||||||| ||||||  || |||||||||||    
T  48438065 gatgtgtggagcaaaggaaatggtaatcaatagataaagtatctccaagcaacaacaacaaaa-acagacctagatctaagtgtagagcaacaccacaag 48438163  T
Q  163 tataaccaaaacaacaaagata 184  Q
     |||| |||||||| |||||||    
T  48438164 cataatcaaaacaataaagata 48438185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 21711392 - 21711467
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||  |  |||||||||||||| ||||||||||||||    
T  21711392 gaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactactcaaggtgtttacaa 21711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 24695083 - 24695007
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||| ||||||||| |||| ||||||||| ||| ||||  |  ||||||||||| |||||||||||||||||    
T  24695083 gaatcctaaaagaaaacacaaaaggaagctttttgatcattccaatggtgaaatctcaccacccaaggtgtttacaa 24695007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 27038135 - 27038249
Alignment:
Q  57 aacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacac 156  Q
    |||| ||||||||| |||||| ||||| |||||||||| | |||||  | ||||||||||||||||| | | ||| ||||||| ||||||  || |||||    
T  27038135 aactaagatgtgtggagcaaatgaaatggtaatcaatgtgtaaagtgtcttcaagcaacaacaacaa-aaacagatctagatctaagtgtagagcaacac 27038233  T
Q  157 cacaagtataaccaaa 172  Q
    |||||| |||| ||||    
T  27038234 cacaagcataatcaaa 27038249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 365
Target Start/End: Original strand, 9666562 - 9666623
Alignment:
Q  306 gttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    |||||||||||||||  || |||||||||||||||||||| |||| |||||||| |||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttc 9666623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 8370405 - 8370330
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| || |||||  ||||||||  |  ||||||||||||||||||| |||||||||    
T  8370405 gaatcctaagagaaaacacaaaaggaaacttttg-atccttccaatggtgaaatctcactacccaagatgtttacaa 8370330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 16264523 - 16264594
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  16264523 cctaagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 16264594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 462
Target Start/End: Original strand, 26299157 - 26299233
Alignment:
Q  387 aatcctaagagaaaacactaaa-gaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||| ||| | ||||||||| ||  ||||  |  |||||||||||||||||||||||||||||    
T  26299157 aatcctaagagaaaacacaaaaaggaagctttttgataattccaatggtgaaatctcactacccaaggtgtttacaa 26299233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 39032466 - 39032395
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  39032466 cctaagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 39032395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 4387166 - 4387107
Alignment:
Q  64 atgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaa 123  Q
    ||||||| ||||||  || |||||||||||||| |||||||||  |||||||||||||||    
T  4387166 atgtgtggagcaaagaaagtagtaatcaatgagtaaagtagccataagcaacaacaacaa 4387107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 30236208 - 30236139
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    |||||||| |||||||||||||||||  || ||||||||||||||||| ||| ||| |||||||| |||||    
T  30236208 gatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccatttt 30236139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Complemental strand, 46860557 - 46860488
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||||||| ||| |||||||| |||||    
T  46860557 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 46860488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 485
Target Start/End: Complemental strand, 6794584 - 6794532
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaaatgtt--ccaactcaagataacctc 485  Q
    ||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  6794584 tgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagaacctc 6794532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 27026795 - 27026904
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaa 161  Q
    ||||||||| |||||| ||||| |||||||||| | |||||  |  ||||||||||||| || | | ||||||||||| ||||||  || ||||||||||    
T  27026795 agatgtgtggagcaaatgaaatggtaatcaatgtgtaaagtgtctccaagcaacaacaagaa-aaacagacctagatctaagtgtagagcaacaccacaa 27026893  T
Q  162 gtataaccaaa 172  Q
    | |||| ||||    
T  27026894 gcataatcaaa 27026904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 40844819 - 40844861
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcc 428  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  40844819 gaatcctaagagaaaacacaaaaggaagctttttgatccttcc 40844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 27453137 - 27453205
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  27453137 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 27453205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 27974861 - 27974793
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  27974861 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 27974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 27986365 - 27986297
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  27986365 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 27986297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 33386584 - 33386516
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  33386584 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 33386516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Complemental strand, 44658628 - 44658591
Alignment:
Q  152 aacaccacaagtataaccaaaacaacaaagatacgaaa 189  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  44658628 aacaccacaaatataaccaaaacaacaaagataagaaa 44658591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 1306167 - 1306195
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  1306167 tgaaatctcactacccaaggtgtttacaa 1306195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 546
Target Start/End: Original strand, 8166722 - 8166762
Alignment:
Q  506 tacctcattttatttaccaagtttctctctcttaaaactct 546  Q
    ||||||||||||||| |||| |||||||||||| |||||||    
T  8166722 tacctcattttatttcccaaatttctctctcttgaaactct 8166762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 455
Target Start/End: Original strand, 10274588 - 10274620
Alignment:
Q  423 ccttcctctaatgaaatctcactacccaaggtg 455  Q
    |||||||||||||| ||||||||||||||||||    
T  10274588 ccttcctctaatgagatctcactacccaaggtg 10274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 32143540 - 32143568
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  32143540 tgaaatctcactacccaaggtgtttacaa 32143568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 33386815 - 33386783
Alignment:
Q  152 aacaccacaagtataaccaaaacaacaaagata 184  Q
    ||||||||||||||||||||||||| |||||||    
T  33386815 aacaccacaagtataaccaaaacaataaagata 33386783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 51 - 467
Target Start/End: Complemental strand, 1115359 - 1114949
Alignment:
Q  51 caataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaag 150  Q
    ||||||||||||||| | || || ||||||| ||||||||||||||||||||||| |||||||||||||||||   |||||| ||||||   |||| |||    
T  1115359 caataaaacttagatatatggagtaaaagaagtagtaatcaatgagcaaagtagcttcaagcaacaacaacaa---atagacatagatctctgtgtgaag 1115263  T
Q  151 taacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtttacgtagttcggtccaaaaaagacctac 250  Q
    ||||||||||    ||   ||| ||||||||||| || ||| |||||   |||||| | | ||||  |||||||| || |||||||| | || ||  |||    
T  1115262 taacaccacagtcttatttaaaccaacaaagatatgacagatgagaaaggaaacaacacaccaat-attgtttacctaattcggtcc-ataatgatttac 1115165  T
Q  251 tttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctatt 350  Q
    | |      ||||||| || ||||| ||| | ||||| |||| ||||||||| |||||||||||||| |   || ||||||| ||| ||||||| ||| |    
T  1115164 tat---ctggagagagcagatctccaatccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctcaaaaataacaaaccctaat 1115068  T
Q  351 ttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagc--ttttttatccttcctctaatgaaatctcactacc 448  Q
    ||||| | |||||||||| ||| || || ||||| ||||  ||||||||||||| |||| || |  |||||| ||||||| ||||||| ||||||| | |    
T  1115067 ttctatccatttttcaagtcacccacactcacaatgaatattaagagaaaacacaaaaggaaacttttttttctccttcccctaatgagatctcaccatc 1114968  T
Q  449 caaggtgtttacaaatgtt 467  Q
    || | |||| |||||||||    
T  1114967 catgttgttaacaaatgtt 1114949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 306 - 467
Target Start/End: Original strand, 99245 - 99405
Alignment:
Q  306 gttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacact 405  Q
    |||||||||||||||  || ||||||||| |||||||||| || |||||||| |||||| |||  ||||| || ||||| |||||||| ||||||| ||     
T  99245 gttacaagaaattagcttagaagctcacagagaacaaactttaatttctacccattttt-aagttactcacactcacaatgaatcctatgagaaaatacc 99343  T
Q  406 aaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    |||| ||||||||| ||| || ||||||||| || | |||||| |||||||||||| |||||    
T  99344 aaaggaagctttttaatcatttctctaatgagatataactacctaaggtgtttacagatgtt 99405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 507
Target Start/End: Complemental strand, 24435899 - 24435778
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt--ccaactcaagataacc 483  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  ||||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  24435899 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttac-aatgtttcccaactcaagagaacc 24435801  T
Q  484 tctcacaaaatacactcaacccta 507  Q
    || ||| ||| |||||||||||||    
T  24435800 tcacac-aaagacactcaacccta 24435778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 23 - 467
Target Start/End: Complemental strand, 33721842 - 33721406
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||||| ||||||  || || |||||||||||  ||||||||| | |||| ||| |||||||| ||||| |||||||  ||||||||||||||||    
T  33721842 tgttgtgaatttgaacaaataatcacatcaataaaacc-agatgtgtggaacaaaggaagtagtaatcgatgagtaaagtagtttcaagcaacaacaaca 33721744  T
Q  123 acagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaatagatcaatgtttgtt 222  Q
    |   | |  |||||||| |||||| ||  | ||||||||  |||  |||| ||||||||||| || ||||  |||||||||||| | | |||| ||  ||    
T  33721743 a---acatccctagatctaagtgtgaaacatcaccacaaacatattcaaagcaacaaagataagagagaaaggaagaaaaacaacacaccaatattactt 33721647  T
Q  223 tacgtagttcggtccaaaaaagacctactttggaggagagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtc 322  Q
      |  ||||  ||||||||  || ||||| ||| | ||||| | || ||||| |||| | ||||| |||| | ||||||||||||||||||||||||||     
T  33721646 atcc-agtttagtccaaaat-gatctactatggggaagaga-acaa-ctctctgatccactatgataagaattatacaaagaggttacaagaaattagtt 33721551  T
Q  323 tacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaa-gaatcctaagagaaaacactaaagaaagctttttta 421  Q
    || || |||| ||||||||||  ||| |||   || |||||| | | ||| || || |  ||| ||||||||||||||||||||||||  |||||||| |    
T  33721550 taaaaactcataaagaacaaaacctaattttcccccattttttaggtcacacacactcctaaatgaatcctaagagaaaacactaaagggagctttttca 33721451  T
Q  422 tccttcctctaatgaaatctcactacccaaggtgtttacaaatgtt 467  Q
    || ||||  |||||||||||||||| | ||||||||||||||||||    
T  33721450 tcattccaataatgaaatctcacta-caaaggtgtttacaaatgtt 33721406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 445
Target Start/End: Complemental strand, 30518182 - 30517998
Alignment:
Q  260 gagagagaagctctccgatctattatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccga 359  Q
    |||||| || ||||| |||| | ||||| ||||||||||||||||||||||| |||| ||   || ||| |||||||||||||||  || |||||||| |    
T  30518182 gagagataaactctctgatccactatgataagagtgatacaaagaggttacatgaaactaacttaaaagttcacaaagaacaaaccttaatttctaccta 30518083  T
Q  360 tttttcaagccactcaaacccacaaa-gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcact 445  Q
    |||||||||  || || || |||||| |||| || |||||||||||||||| ||| ||||| ||||||||  |||||||||||||||    
T  30518082 tttttcaagttacccacactcacaaatgaat-cttagagaaaacactaaaggaag-tttttgatccttccaataatgaaatctcact 30517998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 293 - 454
Target Start/End: Complemental strand, 33690846 - 33690685
Alignment:
Q  293 gtgatacaaagaggttacaagaaattagtctac-aagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcc 391  Q
    |||||||||||| |||||||||||||| | | | ||||||| ||||||||| ||||| |||||||  | |||||||| ||||||||||||| | ||||||    
T  33690846 gtgatacaaagatgttacaagaaatta-tatcctaagctcaaaaagaacaagctctaatttctacacacttttcaagtcactcaaacccacgatgaatcc 33690748  T
Q  392 taagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggt 454  Q
    ||||| ||||||  ||| |||   |||||| | ||  |||| ||| |||||||||||||||||    
T  33690747 taagaaaaaacaacaaaaaaataatttttaacatttttctattgagatctcactacccaaggt 33690685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 306 - 462
Target Start/End: Original strand, 31936665 - 31936820
Alignment:
Q  306 gttacaagaaattagtctacaagctcaca-aagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacac 404  Q
    ||||||||||| |||  | |||||| ||| |||||||||  ||| |||||||| ||||||||   ||| || || | ||| |||||||||||||||||||    
T  31936665 gttacaagaaaatagcttgcaagcttacacaagaacaaatcctaatttctacccatttttcatatcacccacactctcaatgaatcctaagagaaaacac 31936764  T
Q  405 taaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
     |||||| ||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  31936765 -aaagaa-gctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 31936820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 462
Target Start/End: Original strand, 14521783 - 14521919
Alignment:
Q  327 agctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatcctt 426  Q
    ||||||||||||||| |  ||| |||||||  |||||||| | ||| || || | |||  ||||||||||||||||| ||||| ||| ||||||||||||    
T  14521783 agctcacaaagaacacaacctaatttctacacatttttcatgtcacccacactctcaataaatcctaagagaaaacattaaaggaagattttttatcctt 14521882  T
Q  427 cctctaatgaaa-tctcactacccaaggtgtttacaa 462  Q
    ||  |  ||||| ||||||||||||||||||||||||    
T  14521883 ccaatggtgaaattctcactacccaaggtgtttacaa 14521919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 21801268 - 21801196
Alignment:
Q  390 cctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  21801268 cctaagagaaaacacaaaaggaagctttttgatccttccaatgttgaaatctcactacccaaggtgtttacaa 21801196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 5572170 - 5572095
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||  ||| ||||  || |||||||||||||||||||||||||||||    
T  5572170 gaatcctaagagaaaacacaaaaggaagcttttg-atcattccaatagtgaaatctcactacccaaggtgtttacaa 5572095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 18233016 - 18233091
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  18233016 gaatcctaagagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 18233091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 31979682 - 31979757
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  31979682 gaatcctaagagaaaacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 31979757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 548
Target Start/End: Original strand, 30684015 - 30684211
Alignment:
Q  359 atttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttt 458  Q
    |||||||||| |||||||||||||||  ||||| ||||||| ||||||||| ||  ||||| ||| |||||| |||||||| |||||| | || || |||    
T  30684015 atttttcaagtcactcaaacccacaataaatccgaagagaagacactaaag-aatttttttgatcattcctcaaatgaaatatcactatcgaaagtattt 30684113  T
Q  459 acaaatgtt--ccaactcaagataacctctcacaaaatacactcaaccc------tacctcattttatttaccaagtttctctctcttaaaactctct 548  Q
    |||||| ||  ||||| ||| | ||||| |||  |||||  ||||||||      ||| | |||| |||||||||||||||||||||| || ||||||    
T  30684114 acaaatatttcccaacccaaaagaacctttcatcaaatatgctcaaccctaaagttacttgatttgatttaccaagtttctctctcttgaagctctct 30684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 31077240 - 31077140
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    |||||||||||| |||||  || || |||||| ||||  ||||||||  || ||| |||||||||||||||||| ||||||||||||||||| |||| ||    
T  31077240 tgttgtgaattccaacaa--aatcacatcaatgaaacgaagatgtgtagagaaaaggaaatagtaatcaatgagtaaagtagcctcaagcaataacagca 31077143  T
Q  123 aca 125  Q
    |||    
T  31077142 aca 31077140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 400
Target Start/End: Complemental strand, 31419035 - 31418929
Alignment:
Q  294 tgatacaaagaggttacaagaaattagtcta-caagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcct 392  Q
    ||||||||||| ||||||||||||||   || ||||||| |||||||||| || || ||||| || |||||||||| |||||||||||||||  ||| ||    
T  31419035 tgatacaaagaagttacaagaaattatattaacaagctctcaaagaacaatctttaatttcttcc-atttttcaagtcactcaaacccacaacaaattct 31418937  T
Q  393 aagagaaa 400  Q
    ||||||||    
T  31418936 aagagaaa 31418929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 98999 - 99068
Alignment:
Q  51 caataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaa 120  Q
    |||||||||||| | ||||| || ||| ||| |||||||||||||||||||||| || ||||||||||||    
T  98999 caataaaacttaaacgtgtggagtaaaggaagtagtaatcaatgagcaaagtagtcttaagcaacaacaa 99068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 31076864 - 31076787
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaaa 463  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||  |  |||||||||| |||| ||||||||||||||    
T  31076864 gaatcctaagagaaaacactaaagaaatttttttgatcattccaatggtgaaatctcaatacctaaggtgtttacaaa 31076787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 30519307 - 30519125
Alignment:
Q  23 tgttgtgaattcgaacaataaaacatatcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaaca 122  Q
    ||||||||| | ||||||  || |||| |||||||  ||| ||||||| ||||||  |||||||||||||||| |||| ||| ||||| |||||||||||    
T  30519307 tgttgtgaaattgaacaaataatcataccaataaat-ttaaatgtgtggagcaaagaaaatagtaatcaatgatcaaaatagtctcaaacaacaacaaca 30519209  T
Q  123 acagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaa 206  Q
    ||| | | |  |||||  |||||| ||| ||||||| ||  |||   ||| ||||||||||| |||| |||||||  |||||||    
T  30519208 acaaacatatttagatttaagtgtgaagcaacaccataaacatatttaaagcaacaaagataagaaataagagaaagaaaacaa 30519125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 9036160 - 9036253
Alignment:
Q  112 caacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagatacgaaagaagagaagaaaaacaa 206  Q
    |||||||||||||| | | | ||||||| |||||| ||| ||  |||||| ||||| |||||||||||||||| ||||||||||||  |||||||    
T  9036160 caacaacaacaacaaacatatctagatctaagtgtgaagcaat-ccacaattataatcaaaacaacaaagataagaaagaagagaaagaaaacaa 9036253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 27165552 - 27165614
Alignment:
Q  62 agatgtgtgaagcaaaagaaatagtaatcaatgagc-aaagtagcctcaagcaacaacaacaa 123  Q
    ||||||||| |||||| ||| | ||||||||||||| ||||||| ||||||||||||||||||    
T  27165552 agatgtgtggagcaaaggaagtcgtaatcaatgagcaaaagtagtctcaagcaacaacaacaa 27165614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 197
Target Start/End: Original strand, 30683731 - 30683868
Alignment:
Q  60 ttagatgtgtgaagcaaaagaaa-tagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacacca 158  Q
    ||||||||||| ||||||| ||| ||||||||||||| |||| ||  |||||  |  | |||||||| |||||||||||   |||||  ||| || ||||    
T  30683731 ttagatgtgtggagcaaaaaaaagtagtaatcaatgaccaaa-taatctcaaatagtagcaacaacaaatagacctagagttaagtgcgaagcaatacca 30683829  T
Q  159 caagtataaccaaaacaacaaagatacgaaagaagagaa 197  Q
     ||||||||| ||||||||||||||| ||||||| ||||    
T  30683830 taagtataacaaaaacaacaaagataagaaagaaaagaa 30683868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 4630123 - 4630195
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgttta 459  Q
    ||||||||||||||||||| |||| |||| |||| ||||||||  |  |||||||||||||||||| |||||||    
T  4630123 gaatcctaagagaaaacacaaaaggaagc-ttttgatccttccaatggtgaaatctcactacccaatgtgttta 4630195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 386 - 455
Target Start/End: Complemental strand, 10077096 - 10077027
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtg 455  Q
    ||||||||||| ||||||| |||| ||||||||| ||||||||  |  | ||||||||||||||||||||    
T  10077096 gaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtcaaatctcactacccaaggtg 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 20504932 - 20504973
Alignment:
Q  291 gagtgatacaaagaggttacaagaaattagtctacaagctca 332  Q
    |||| |||||||||||||||||||||||||| ||||||||||    
T  20504932 gagtaatacaaagaggttacaagaaattagtttacaagctca 20504973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 5385765 - 5385805
Alignment:
Q  387 aatcctaagagaaaacactaaagaaagcttttttatccttc 427  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  5385765 aatcccaagaggaaacactaaagaaagcttttttatccttc 5385805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 2973024 - 2973093
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttt 363  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||||||| ||| |||||||| |||||    
T  2973024 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaac-ctaatttctacccatttt 2973093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 28301265 - 28301166
Alignment:
Q  23 tgttgtgaattcgaacaataaaacat---atcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaaca 119  Q
    |||||||||||| |||||||||| ||   ||||||||| |||||||||||| || ||| |   |||||||||||| ||| ||||| |||||| |||||||    
T  28301265 tgttgtgaattcaaacaataaaaaatcacatcaataaa-cttagatgtgtggagaaaagg---tagtaatcaatgggcagagtagtctcaagaaacaaca 28301170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 28510808 - 28510907
Alignment:
Q  23 tgttgtgaattcgaacaataaaacat---atcaataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaaca 119  Q
    |||||||||||| |||||||||| ||   ||||||||| |||||||||||| || ||| |   |||||||||||| ||| ||||| |||||| |||||||    
T  28510808 tgttgtgaattcaaacaataaaaaatcacatcaataaa-cttagatgtgtggagaaaagg---tagtaatcaatgggcagagtagtctcaagaaacaaca 28510903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 291 - 420
Target Start/End: Complemental strand, 21247124 - 21246994
Alignment:
Q  291 gagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatc 390  Q
    |||| ||||||| |||||||||||||||||  || ||| |||| |||||  ||||||| |||||||| || | | ||| ||||| || | |||| ||||     
T  21247124 gagtaatacaaaaaggttacaagaaattagcttaaaagatcactaagaaagaactctaatttctacccatgtatgaagtcactctaatcaacaatgaatt 21247025  T
Q  391 ctaagagaaaac-actaaagaaagctttttt 420  Q
    |||||| ||||| | ||||||||| ||||||    
T  21247024 ctaagataaaacaaataaagaaagttttttt 21246994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 82 - 196
Target Start/End: Complemental strand, 21247325 - 21247212
Alignment:
Q  82 atagtaatcaatgagcaaagtagcctcaagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaag 181  Q
    ||||||||||| ||||||||||||| ||| ||| || ||||||| |   || || ||| |||||| ||| |||| |||||||||||  ||| ||| ||||    
T  21247325 atagtaatcaa-gagcaaagtagccccaatcaaaaataacaacaaaccaacttaaatctaagtgtgaagcaacaacacaagtataaagaaagcaagaaag 21247227  T
Q  182 atacgaaagaagaga 196  Q
    ||| |||||||||||    
T  21247226 ataagaaagaagaga 21247212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 462
Target Start/End: Original strand, 21356253 - 21356282
Alignment:
Q  433 atgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||||||||||||||    
T  21356253 atgaaatctcactacccaaggtgtttacaa 21356282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 26830220 - 26830279
Alignment:
Q  307 ttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||||||||  || ||||||||||||||||| ||||||| |||||||| |||||||    
T  26830220 ttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttctacccatttttc 26830279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 5757358 - 5757330
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  5757358 tgaaatctcactacccaaggtgtttacaa 5757330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 22963595 - 22963659
Alignment:
Q  108 caagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaa 172  Q
    |||||||||||||||| | | ||||||||||| ||||||  || ||||||||||| |||| ||||    
T  22963595 caagcaacaacaacaaaaaacagacctagatctaagtgtagagcaacaccacaagcataatcaaa 22963659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 22963916 - 22963944
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  22963916 tgaaatctcactacccaaggtgtttacaa 22963944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 23824477 - 23824449
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  23824477 tgaaatctcactacccaaggtgtttacaa 23824449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 23824798 - 23824734
Alignment:
Q  108 caagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaa 172  Q
    |||||||||||||||| | | ||||||||||| ||||||  || ||||||||||| |||| ||||    
T  23824798 caagcaacaacaacaaaaaacagacctagatctaagtgtagagcaacaccacaagcataatcaaa 23824734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 462
Target Start/End: Complemental strand, 31086401 - 31086326
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||  |||  ||||||||  ||||||||  |  ||||||||||| |||||||||||||||||    
T  31086401 gaatcctaagagaaaacataaaaagaagcttttg-atccttccaatggtgaaatctcacaacccaaggtgtttacaa 31086326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 1e-18; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 5854 - 5930
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  5854 gaatcctaagagaaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 2663 - 2739
Alignment:
Q  386 gaatcctaagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||| ||||||| |||| ||||||||| ||||||||  |  |||||||||||||| ||||||||||||||    
T  2663 gaatcctaagataaaacacaaaaggaagctttttgatccttccaatggtgaaatctcactacgcaaggtgtttacaa 2739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 133199 - 133131
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  133199 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 133131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 29735 - 29674
Alignment:
Q  64 atgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||||| ||||||||||||||    
T  29735 atgtgtgaagcaaaggaagtggtaatcaatgagtaaagtatcctcaaccaacaacaacaaca 29674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 462
Target Start/End: Original strand, 10899 - 10976
Alignment:
Q  386 gaatcctaagagaaaacactaaaga-aagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||||||||||||||  ||| | ||||||||| ||||||||  |  |||||||||||||||||||||||||||||    
T  10899 gaatcctaagagaaaacagaaaaaagaagctttttgatccttccaatggtgaaatctcactacccaaggtgtttacaa 10976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 10624 - 10700
Alignment:
Q  108 caagcaacaacaacaacagatagacctagatcaaagtgttaagtaacaccacaagtataaccaaaacaacaaagata 184  Q
    |||||||||||||||| | | ||||||| ||| ||||||  || ||||||||||| |||| |||| ||| |||||||    
T  10624 caagcaacaacaacaaaaaacagacctaaatctaagtgtagagcaacaccacaagcataatcaaagcaataaagata 10700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 43109 - 43170
Alignment:
Q  64 atgtgtgaagcaaaagaaatagtaatcaatgagcaaagtagcctcaagcaacaacaacaaca 125  Q
    |||||||||||||| ||| | |||||||||||| |||||| |||||| ||||||||||||||    
T  43109 atgtgtgaagcaaaggaagtggtaatcaatgagtaaagtatcctcaaccaacaacaacaaca 43170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 462
Target Start/End: Original strand, 23641 - 23777
Alignment:
Q  326 aagctcacaaagaacaaactctattttctaccgatttttcaagccactcaaacccacaaagaatcctaagagaaaacactaaa-gaaagcttttttatcc 424  Q
    ||||||||||| |||||  |||| |||||||| ||||| || | ||  || || ||||| ||||||||||||||||||| ||| ||   |||||||||||    
T  23641 aagctcacaaaaaacaagatctaatttctacccatttt-catgtcagacacactcacaatgaatcctaagagaaaacacaaaatgatgccttttttatcc 23739  T
Q  425 ttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    |||   |  ||| |||||||||||||||||| ||||||    
T  23740 ttctaatggtgacatctcactacccaaggtgattacaa 23777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 365
Target Start/End: Complemental strand, 7410 - 7339
Alignment:
Q  295 gatacaaagaggttacaagaaattag--tctacaagctcacaaagaacaaactctattttctaccgatttttc 365  Q
    ||||||||  ||||||||||||||||  || ||||||||||||||||||| || || |||||||| |||||||    
T  7410 gatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacct-taatttctacccatttttc 7339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 8337 - 8269
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  8337 aagagaagacacaaaaggaagctttta-atccttccaatggtgaaatctcactacccaaggtgtttacaa 8269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 184
Target Start/End: Complemental strand, 8578 - 8546
Alignment:
Q  152 aacaccacaagtataaccaaaacaacaaagata 184  Q
    ||||||||||||||||||||||||| |||||||    
T  8578 aacaccacaagtataaccaaaacaataaagata 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 45375 - 45443
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  45375 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 45443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 36752 - 36684
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  36752 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 36684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 43881 - 43813
Alignment:
Q  393 aagagaaaacactaaagaaagcttttttatccttcctctaatgaaatctcactacccaaggtgtttacaa 462  Q
    ||||||| |||| |||| ||||||||  ||||||||  |  |||||||||||||||||||||||||||||    
T  43881 aagagaagacacaaaaggaagcttttg-atccttccaatggtgaaatctcactacccaaggtgtttacaa 43813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 16237 - 16192
Alignment:
Q  51 caataaaacttagatgtgtgaagcaaaagaaatagtaatcaatgag 96  Q
    |||||||||||||||||||  |||||| ||| ||||||||||||||    
T  16237 caataaaacttagatgtgtcgagcaaaggaagtagtaatcaatgag 16192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 16019 - 15959
Alignment:
Q  283 tatgagaagagtgatacaaagaggttacaagaaattagtctacaagctcacaaagaacaaa 343  Q
    ||||| |||||| ||||||||| |||||||||||||||  || || | |||||||||||||    
T  16019 tatgataagagttatacaaagatgttacaagaaattagcttaaaaacccacaaagaacaaa 15959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 17468 - 17496
Alignment:
Q  434 tgaaatctcactacccaaggtgtttacaa 462  Q
    |||||||||||||||||||||||||||||    
T  17468 tgaaatctcactacccaaggtgtttacaa 17496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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