View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12451_low_18 (Length: 222)

Name: NF12451_low_18
Description: NF12451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12451_low_18
NF12451_low_18
[»] chr7 (35 HSPs)
chr7 (2-221)||(16041243-16041462)
chr7 (1-222)||(16450001-16450222)
chr7 (1-222)||(31088467-31088688)
chr7 (1-222)||(45733379-45733600)
chr7 (1-141)||(2109008-2109148)
chr7 (1-141)||(26484694-26484834)
chr7 (1-141)||(39211026-39211166)
chr7 (13-218)||(10916883-10917088)
chr7 (1-141)||(2775359-2775499)
chr7 (13-218)||(16503395-16503603)
chr7 (13-218)||(16518431-16518639)
chr7 (13-218)||(11424791-11424999)
chr7 (36-141)||(18540799-18540904)
chr7 (13-218)||(5127912-5128120)
chr7 (13-156)||(2154558-2154701)
chr7 (13-156)||(5147355-5147498)
chr7 (13-156)||(26435242-26435385)
chr7 (13-134)||(31124927-31125048)
chr7 (13-132)||(3445315-3445434)
chr7 (13-156)||(4145138-4145281)
chr7 (13-156)||(9618636-9618779)
chr7 (13-156)||(16736475-16736618)
chr7 (13-156)||(16751529-16751672)
chr7 (13-156)||(17523517-17523660)
chr7 (13-156)||(17529555-17529698)
chr7 (13-156)||(26275109-26275252)
chr7 (13-156)||(26319884-26320027)
chr7 (13-156)||(45387328-45387471)
chr7 (36-218)||(5159442-5159624)
chr7 (13-134)||(31564405-31564526)
chr7 (13-156)||(26669929-26670072)
chr7 (13-123)||(11441590-11441700)
chr7 (31-132)||(26485756-26485857)
chr7 (13-156)||(24592556-24592699)
chr7 (13-132)||(26537885-26538004)
[»] chr5 (51 HSPs)
chr5 (1-222)||(22888397-22888618)
chr5 (5-222)||(25198956-25199173)
chr5 (1-222)||(13184662-13184883)
chr5 (1-222)||(33877174-33877395)
chr5 (12-222)||(23892130-23892343)
chr5 (1-222)||(11325721-11325942)
chr5 (1-222)||(13440508-13440729)
chr5 (1-141)||(29889096-29889236)
chr5 (13-218)||(24969952-24970154)
chr5 (13-218)||(30934564-30934769)
chr5 (13-218)||(11549282-11549490)
chr5 (13-218)||(23718014-23718222)
chr5 (13-218)||(23752476-23752684)
chr5 (13-218)||(22999140-22999348)
chr5 (13-218)||(24688183-24688391)
chr5 (13-218)||(33777415-33777623)
chr5 (13-213)||(32599498-32599698)
chr5 (13-156)||(2511044-2511187)
chr5 (13-156)||(8665501-8665644)
chr5 (13-156)||(9548569-9548712)
chr5 (13-156)||(15758883-15759026)
chr5 (13-156)||(18375438-18375581)
chr5 (13-156)||(41674702-41674845)
chr5 (13-134)||(37671509-37671630)
chr5 (13-156)||(6874298-6874441)
chr5 (13-156)||(26480385-26480528)
chr5 (13-156)||(33516349-33516492)
chr5 (13-134)||(3789556-3789677)
chr5 (13-134)||(28649250-28649371)
chr5 (13-156)||(5637903-5638046)
chr5 (13-156)||(9317444-9317587)
chr5 (13-156)||(12132148-12132291)
chr5 (13-156)||(15658786-15658929)
chr5 (13-156)||(30152011-30152154)
chr5 (13-156)||(30168462-30168605)
chr5 (13-132)||(31826433-31826552)
chr5 (13-135)||(28959812-28959934)
chr5 (36-218)||(33292456-33292638)
chr5 (13-162)||(34616505-34616654)
chr5 (13-134)||(37358669-37358790)
chr5 (13-134)||(37771013-37771134)
chr5 (36-134)||(13324878-13324976)
chr5 (13-123)||(31431466-31431576)
chr5 (13-134)||(18500756-18500877)
chr5 (13-134)||(37754995-37755116)
chr5 (13-156)||(29967092-29967235)
chr5 (13-156)||(30029408-30029551)
chr5 (13-132)||(43078269-43078388)
chr5 (36-132)||(24681457-24681553)
chr5 (36-132)||(24723984-24724080)
chr5 (36-132)||(40473598-40473694)
[»] chr4 (25 HSPs)
chr4 (1-222)||(1900190-1900411)
chr4 (1-222)||(15227803-15228024)
chr4 (1-222)||(15285045-15285266)
chr4 (1-222)||(24460722-24460943)
chr4 (9-222)||(14235650-14235866)
chr4 (1-218)||(15391455-15391669)
chr4 (13-218)||(17013934-17014142)
chr4 (13-218)||(24592443-24592648)
chr4 (13-218)||(14664952-14665160)
chr4 (13-218)||(6569787-6569995)
chr4 (13-156)||(14098540-14098683)
chr4 (13-156)||(14763433-14763576)
chr4 (13-134)||(18800742-18800863)
chr4 (13-156)||(5005872-5006015)
chr4 (13-156)||(27163446-27163589)
chr4 (13-132)||(30753777-30753896)
chr4 (13-156)||(40105767-40105910)
chr4 (36-218)||(24112599-24112781)
chr4 (36-218)||(34189112-34189294)
chr4 (13-218)||(36344644-36344849)
chr4 (13-156)||(31126647-31126790)
chr4 (13-132)||(33673927-33674046)
chr4 (13-134)||(54833408-54833529)
chr4 (98-156)||(21969700-21969758)
chr4 (36-132)||(39850661-39850757)
[»] chr2 (40 HSPs)
chr2 (1-222)||(21703270-21703491)
chr2 (1-222)||(19456527-19456748)
chr2 (1-222)||(27118602-27118823)
chr2 (1-222)||(16163513-16163734)
chr2 (13-222)||(31891446-31891655)
chr2 (1-222)||(34156925-34157146)
chr2 (1-222)||(3784568-3784789)
chr2 (1-222)||(34303409-34303630)
chr2 (1-141)||(27392964-27393104)
chr2 (13-218)||(23128684-23128892)
chr2 (13-218)||(28882129-28882337)
chr2 (13-218)||(12655457-12655665)
chr2 (13-218)||(20837833-20838041)
chr2 (13-218)||(27434562-27434770)
chr2 (13-156)||(11635304-11635447)
chr2 (13-156)||(21677300-21677443)
chr2 (13-156)||(11641493-11641636)
chr2 (13-156)||(16829456-16829599)
chr2 (13-156)||(16891882-16892025)
chr2 (13-156)||(22926146-22926289)
chr2 (13-156)||(34279429-34279572)
chr2 (13-156)||(31876261-31876404)
chr2 (13-156)||(34286334-34286477)
chr2 (13-156)||(34291394-34291537)
chr2 (13-156)||(34861660-34861803)
chr2 (13-156)||(37686027-37686170)
chr2 (13-156)||(37701292-37701435)
chr2 (1-132)||(40233515-40233646)
chr2 (13-135)||(39890075-39890197)
chr2 (13-156)||(37925473-37925616)
chr2 (13-123)||(260871-260981)
chr2 (13-134)||(37375163-37375284)
chr2 (36-156)||(13936685-13936805)
chr2 (165-218)||(27392908-27392961)
chr2 (13-156)||(32049778-32049921)
chr2 (36-132)||(12716743-12716839)
chr2 (36-132)||(27777226-27777322)
chr2 (36-132)||(27803711-27803807)
chr2 (36-132)||(27816984-27817080)
chr2 (36-132)||(39051963-39052059)
[»] chr1 (9 HSPs)
chr1 (1-222)||(16208148-16208366)
chr1 (1-222)||(20340452-20340673)
chr1 (1-151)||(20461069-20461219)
chr1 (1-141)||(28151860-28152000)
chr1 (13-156)||(41793437-41793580)
chr1 (165-222)||(20461022-20461079)
chr1 (13-156)||(28584964-28585107)
chr1 (13-156)||(10962653-10962796)
chr1 (13-156)||(51638201-51638344)
[»] chr6 (46 HSPs)
chr6 (1-222)||(28162572-28162793)
chr6 (1-222)||(8892370-8892591)
chr6 (1-222)||(8903605-8903826)
chr6 (1-222)||(13522133-13522354)
chr6 (1-222)||(33374316-33374537)
chr6 (1-222)||(22477333-22477557)
chr6 (13-218)||(20160620-20160825)
chr6 (13-218)||(22172006-22172211)
chr6 (1-178)||(22456994-22457174)
chr6 (1-137)||(27290430-27290566)
chr6 (1-141)||(14143345-14143485)
chr6 (1-141)||(26787940-26788080)
chr6 (1-141)||(27196313-27196453)
chr6 (1-141)||(27252787-27252927)
chr6 (13-218)||(22934952-22935157)
chr6 (13-218)||(23857397-23857602)
chr6 (13-218)||(13299023-13299231)
chr6 (13-218)||(15424389-15424597)
chr6 (13-218)||(24304690-24304898)
chr6 (13-156)||(26918361-26918504)
chr6 (13-218)||(26988917-26989125)
chr6 (13-218)||(26999989-27000197)
chr6 (13-156)||(24863698-24863841)
chr6 (13-218)||(16749770-16749978)
chr6 (13-134)||(4525289-4525410)
chr6 (13-156)||(29572994-29573137)
chr6 (13-156)||(30558088-30558231)
chr6 (13-134)||(4773009-4773130)
chr6 (13-134)||(27007730-27007851)
chr6 (13-134)||(27485132-27485253)
chr6 (13-132)||(3696086-3696205)
chr6 (13-132)||(27272652-27272771)
chr6 (13-135)||(26777687-26777809)
chr6 (13-134)||(4757767-4757888)
chr6 (13-134)||(26116482-26116603)
chr6 (13-134)||(29501418-29501539)
chr6 (13-218)||(29549394-29549599)
chr6 (13-132)||(16674144-16674263)
chr6 (13-134)||(27044390-27044511)
chr6 (13-123)||(4545847-4545957)
chr6 (13-123)||(4724206-4724316)
chr6 (36-134)||(17025280-17025378)
chr6 (13-123)||(28207468-28207578)
chr6 (13-134)||(27360064-27360185)
chr6 (13-134)||(27450407-27450528)
chr6 (13-159)||(16944099-16944248)
[»] chr3 (60 HSPs)
chr3 (1-222)||(18530273-18530488)
chr3 (1-222)||(16626664-16626885)
chr3 (1-222)||(17993942-17994163)
chr3 (1-222)||(4625823-4626044)
chr3 (1-220)||(5652268-5652487)
chr3 (1-141)||(32292712-32292852)
chr3 (13-156)||(15892876-15893019)
chr3 (13-218)||(8301437-8301642)
chr3 (1-141)||(31034275-31034415)
chr3 (13-218)||(8295855-8296060)
chr3 (13-218)||(18051142-18051350)
chr3 (13-218)||(18330549-18330757)
chr3 (13-218)||(4796823-4797031)
chr3 (13-218)||(22387748-22387953)
chr3 (13-156)||(28116124-28116267)
chr3 (13-218)||(29148925-29149133)
chr3 (13-218)||(35880646-35880854)
chr3 (13-134)||(6542632-6542753)
chr3 (13-156)||(4721576-4721719)
chr3 (13-156)||(10396078-10396221)
chr3 (13-156)||(15741264-15741407)
chr3 (13-156)||(17985126-17985269)
chr3 (13-218)||(6192196-6192404)
chr3 (13-162)||(4346857-4347006)
chr3 (13-162)||(28021214-28021363)
chr3 (13-156)||(5609492-5609635)
chr3 (13-132)||(11110519-11110638)
chr3 (13-156)||(18225136-18225279)
chr3 (13-156)||(18277222-18277365)
chr3 (13-156)||(18292523-18292666)
chr3 (13-156)||(18307824-18307967)
chr3 (13-156)||(21674638-21674781)
chr3 (13-156)||(28339247-28339390)
chr3 (13-156)||(31964643-31964786)
chr3 (13-156)||(50134241-50134384)
chr3 (36-218)||(32439037-32439219)
chr3 (13-134)||(18242706-18242827)
chr3 (13-156)||(4416864-4417007)
chr3 (13-156)||(5713172-5713315)
chr3 (13-156)||(5724082-5724225)
chr3 (13-156)||(5757252-5757395)
chr3 (13-156)||(5768143-5768286)
chr3 (13-156)||(7996507-7996650)
chr3 (13-156)||(10643015-10643158)
chr3 (13-156)||(47023398-47023541)
chr3 (13-132)||(48465896-48466015)
chr3 (5-218)||(4893093-4893306)
chr3 (13-134)||(5596527-5596648)
chr3 (13-156)||(7073157-7073300)
chr3 (13-132)||(36997247-36997366)
chr3 (13-133)||(5466953-5467073)
chr3 (13-156)||(5013657-5013800)
chr3 (36-134)||(20066010-20066108)
chr3 (13-135)||(22871026-22871148)
chr3 (13-135)||(22886085-22886207)
chr3 (13-123)||(51782001-51782111)
chr3 (13-156)||(24328104-24328247)
chr3 (13-123)||(8211716-8211826)
chr3 (36-132)||(20577040-20577136)
chr3 (36-132)||(29665163-29665259)
[»] chr8 (22 HSPs)
chr8 (1-222)||(9354540-9354761)
chr8 (1-222)||(44563019-44563240)
chr8 (1-222)||(19659115-19659336)
chr8 (1-218)||(22080954-22081168)
chr8 (13-156)||(16283433-16283576)
chr8 (1-141)||(33244664-33244804)
chr8 (13-218)||(2137347-2137555)
chr8 (13-218)||(27608993-27609201)
chr8 (13-218)||(16277473-16277681)
chr8 (13-218)||(14557546-14557751)
chr8 (13-156)||(19688082-19688225)
chr8 (13-156)||(31354508-31354651)
chr8 (13-156)||(19208448-19208591)
chr8 (13-156)||(31489838-31489981)
chr8 (13-134)||(3329595-3329716)
chr8 (13-156)||(19674425-19674568)
chr8 (13-156)||(28362043-28362186)
chr8 (12-134)||(29829328-29829450)
chr8 (13-135)||(18710591-18710713)
chr8 (13-134)||(12092812-12092933)
chr8 (13-134)||(19286468-19286589)
chr8 (13-156)||(33258707-33258850)
[»] scaffold0260 (1 HSPs)
scaffold0260 (1-222)||(2775-2996)
[»] scaffold0124 (2 HSPs)
scaffold0124 (1-222)||(20327-20527)
scaffold0124 (13-218)||(30372-30579)
[»] scaffold0558 (1 HSPs)
scaffold0558 (1-168)||(145-312)
[»] scaffold0109 (1 HSPs)
scaffold0109 (1-218)||(21486-21700)
[»] scaffold0089 (3 HSPs)
scaffold0089 (13-156)||(29747-29890)
scaffold0089 (13-218)||(47114-47322)
scaffold0089 (13-218)||(40198-40406)
[»] scaffold0143 (1 HSPs)
scaffold0143 (13-218)||(27211-27419)
[»] scaffold0415 (1 HSPs)
scaffold0415 (1-70)||(2034-2103)
[»] scaffold0237 (1 HSPs)
scaffold0237 (13-156)||(15059-15202)
[»] scaffold0159 (2 HSPs)
scaffold0159 (13-156)||(9195-9338)
scaffold0159 (13-156)||(19999-20142)
[»] scaffold0029 (1 HSPs)
scaffold0029 (13-218)||(258-467)
[»] scaffold0350 (1 HSPs)
scaffold0350 (13-156)||(7368-7511)
[»] scaffold0336 (1 HSPs)
scaffold0336 (13-164)||(9542-9693)
[»] scaffold0144 (1 HSPs)
scaffold0144 (20-156)||(26338-26474)
[»] scaffold0038 (1 HSPs)
scaffold0038 (13-123)||(7966-8076)


Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 16041462 - 16041243
Alignment:
Q  2 aggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcat 101  Q
    ||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  16041462 aggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggcat 16041363  T
Q  102 acaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacggg 201  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  16041362 acaacattggtatcggagggaaggtaggtctagcttgttgatgctgttgttgttgaactggtggctgttgttgcatttgctgaacgacggaattaacggg 16041263  T
Q  202 tacctgaggttgacccgatg 221  Q
    ||||||||||||||||||||    
T  16041262 tacctgaggttgacccgatg 16041243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16450001 - 16450222
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  16450001 gaggtcagaacgaaacctgggaggcaaaggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggca 16450100  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||| | |||||||||||||||||| ||    
T  16450101 tatagcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgctgttgagctggtggctgttgttgcacttgctgaacgacggcattaatgg 16450200  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  16450201 gtacctgaggttgacccgatgg 16450222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31088467 - 31088688
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  31088467 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 31088566  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  31088567 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 31088666  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  31088667 gtacctgaggttgacccgatgg 31088688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 45733600 - 45733379
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||   ||||||||| |||    
T  45733600 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagttaagagtaattcagca 45733501  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  45733500 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 45733401  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  45733400 gtacctgaggttgacccgatgg 45733379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 2109008 - 2109148
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  2109008 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 2109107  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  2109108 tatatcattggtatcagaggaaaggtaggtctagcttgttg 2109148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26484834 - 26484694
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  26484834 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 26484735  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  26484734 tatagcattggtatcagaggaaaggtaggtctagcttgttg 26484694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 39211026 - 39211166
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| ||||| |||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  39211026 gaggtcagaccggaacctgggaggtaacggatcaggtggaagcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 39211125  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  39211126 tatagcattggtatcagaggaaaggtaggtctagcttgttg 39211166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 10916883 - 10917088
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  10916883 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 10916982  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||||||   |||||||| |||  | ||| |||  |||||||| ||||| |||||||    
T  10916983 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacaggtacttgaggtt 10917082  T
Q  213 gacccg 218  Q
    ||||||    
T  10917083 gacccg 10917088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 2775499 - 2775359
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||||||||  | || |||    
T  2775499 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagctactcagca 2775400  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| ||||||||||||||||||| |||||    
T  2775399 tatagcattggtatcagaggaaaggtaggtctagcctgttg 2775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 16503395 - 16503603
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  16503395 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 16503494  T
Q  113 atcggaggaaaggtaggtctagcttgttgac---gttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||  ||||||||| |||  | ||| | |  |||||||||||||||||||    
T  16503495 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcagctgttgtttcatctgttgagcaattgcattaacgggtacctgag 16503594  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  16503595 gttgacccg 16503603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 16518431 - 16518639
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  16518431 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 16518530  T
Q  113 atcggaggaaaggtaggtctagcttgttgac---gttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||  ||||||||| |||  | ||| | |  |||||||||||||||||||    
T  16518531 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcagctgttgtttcatctgttgagcaattgcattaacgggtacctgag 16518630  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  16518631 gttgacccg 16518639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 11424791 - 11424999
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||||||||| ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  11424791 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtgcaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 11424890  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  11424891 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 11424990  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  11424991 gttgacccg 11424999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 18540904 - 18540799
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| || || ||||| | |||||||||| ||||||| |||||||||||    
T  18540904 gtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagcatatagcattggtatcagaggaaaagtaggtctagc 18540805  T
Q  136 ttgttg 141  Q
    ||||||    
T  18540804 ttgttg 18540799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 5128120 - 5127912
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||| | |||| ||||| |||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  5128120 gaaccttggaggcaacggattaggtgggggcttaccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 5128021  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    ||||||||||| |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  |||||||||||||| ||||    
T  5128020 atcggaggaaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgag 5127921  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  5127920 gttgacccg 5127912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 2154701 - 2154558
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  2154701 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 2154602  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||| |||||||||| |||  |||||| |||||    
T  2154601 atcggagggaaagtatgtctagcttgctgattttgttgttgttg 2154558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 5147355 - 5147498
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5147355 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 5147454  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    ||||||||||| ||||||||||||||||||  |||||| |||||    
T  5147455 atcggaggaaaagtaggtctagcttgttgattttgttgttgttg 5147498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 26435385 - 26435242
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  26435385 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 26435286  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| || ||||||||||| |||  |||||| |||||    
T  26435285 ataggaggaaaagttggtctagcttgctgattttgttgttgttg 26435242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 31125048 - 31124927
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||||||| || || | ||| |||||||||||||||    
T  31125048 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 31124949  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  31124948 ataggaggaaaagttggtctag 31124927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 3445434 - 3445315
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  3445434 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 3445335  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  3445334 ataggaggaaaagttggtct 3445315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 4145138 - 4145281
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  4145138 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 4145237  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  4145238 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 4145281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 9618779 - 9618636
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  9618779 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 9618680  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  9618679 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 9618636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 16736475 - 16736618
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||| || |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  16736475 gaaccttggaggtaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 16736574  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  16736575 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 16736618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 16751529 - 16751672
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||| || |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  16751529 gaaccttggaggtaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 16751628  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  16751629 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 16751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 17523660 - 17523517
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||| || |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  17523660 gaaccttggaggtaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 17523561  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  17523560 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 17523517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17529555 - 17529698
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||| || |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  17529555 gaaccttggaggtaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 17529654  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  17529655 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 17529698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 26275109 - 26275252
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  26275109 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 26275208  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  26275209 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 26275252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 26319884 - 26320027
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  26319884 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 26319983  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  26319984 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 26320027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 45387471 - 45387328
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  45387471 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 45387372  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  45387371 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 45387328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 218
Target Start/End: Complemental strand, 5159624 - 5159442
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || |  || ||||||||||||||||| |||||||| || ||||||||    
T  5159624 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggtataggaggaaaagttggtctagc 5159525  T
Q  136 ttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
     | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||| ||||    
T  5159524 atattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggttggcccg 5159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 31564405 - 31564526
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||||||| || || || || |||||||||||||||    
T  31564405 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 31564504  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  31564505 ataggaggaaaagttggtctag 31564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 26669929 - 26670072
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| || ||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  26669929 gaaccttgggggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 26670028  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  26670029 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 26670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 11441700 - 11441590
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| || ||||||||||||    
T  11441700 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcgtacaacattggt 11441601  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  11441600 ataggaggaaa 11441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 26485756 - 26485857
Alignment:
Q  31 atcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggt 130  Q
    |||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| ||||||||||||||||| |||||||| || |||    
T  26485756 atcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggtataggaggaaaagttggt 26485855  T
Q  131 ct 132  Q
    ||    
T  26485856 ct 26485857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 24592556 - 24592699
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  24592556 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacatcggt 24592655  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| ||||| || || ||||| |||  |||||| |||||    
T  24592656 ataggagggaaggttggcctggcttgctgattttgttgttgttg 24592699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 26537885 - 26538004
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || |  || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  26537885 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgcacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 26537984  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  26537985 ataggaggaaaagttggtct 26538004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 22888618 - 22888397
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| || |||    
T  22888618 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaaatagagtcgggagtaactcagca 22888519  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22888518 tacaacattggtatcggagggaaggtaggtctagcttgttgatgctgttgttgttgaactggtggctgttgttgcatttgctgaacgacggcattaacgg 22888419  T
Q  201 gtacctgaggttgacccgatgg 222  Q
     |||||||||||||||||||||    
T  22888418 ttacctgaggttgacccgatgg 22888397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 25199173 - 25198956
Alignment:
Q  5 tcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcataca 104  Q
    |||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  25199173 tcagaacggaacctgggaggtaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggcataca 25199074  T
Q  105 acattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtac 204  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  25199073 acattggtatcggagaaaaggtaggtctagcttgttgatgctgttgttgttgaactggtggctgttgttgcatttgctgaacgacggcgttaacgagtac 25198974  T
Q  205 ctgaggttgacccgatgg 222  Q
    ||||||||||||||||||    
T  25198973 ctgaggttgacccgatgg 25198956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13184662 - 13184883
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  13184662 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 13184761  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  13184762 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 13184861  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  13184862 gtacctgaggttgacccgatgg 13184883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 33877395 - 33877174
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  33877395 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 33877296  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  33877295 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 33877196  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  33877195 gtacctgaggttgacccgatgg 33877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 12 - 222
Target Start/End: Complemental strand, 23892343 - 23892130
Alignment:
Q  12 ggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattgg 111  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||||||||  |||||    
T  23892343 ggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcggaagcaactcggcatacatgattgg 23892244  T
Q  112 tatcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctga 208  Q
    |||||||||||||||||||||||||||||||    ||||||| |||||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||    
T  23892243 tatcggaggaaaggtaggtctagcttgttgatgttgttgttgttgttgaaccggtggctgttgttgcatttgctgaacgatggcattgacgggtacctga 23892144  T
Q  209 ggttgacccgatgg 222  Q
    ||||||||||||||    
T  23892143 ggttgacccgatgg 23892130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 11325942 - 11325721
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  11325942 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 11325843  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  11325842 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgg 11325743  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||| ||| ||||    
T  11325742 gtacctgaggttgtcccaatgg 11325721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13440508 - 13440729
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||  |||    
T  13440508 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaatttagca 13440607  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  13440608 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 13440707  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  13440708 gtacctgaggttgacccgatgg 13440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 29889096 - 29889236
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  |||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||  || |||    
T  29889096 gaggtcagaccggaacctgggaggcaacggatcaggtggaggcttgccctgtctggtggtgcagtgccctctgagaagtagagttgggagtagctcagca 29889195  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  29889196 tacaacattggtatcagaggaaaggtaggtctagcttgttg 29889236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 24970154 - 24969952
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  24970154 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 24970055  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||||||| |||||||   |||||| ||  ||||||||| |||  | ||| | |  ||||||||||||||||||||||    
T  24970054 atcggagggaaagtaggtctagcttgttgatgttgttg---ttgaaccggcagctgttgtttcatctgttgagcaattgcattaacgggtacctgaggtt 24969958  T
Q  213 gacccg 218  Q
    ||||||    
T  24969957 gacccg 24969952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 30934769 - 30934564
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||| ||||| |||    
T  30934769 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatataacatcggt 30934670  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| |||||||    
T  30934669 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgaggtt 30934570  T
Q  213 gacccg 218  Q
    ||||||    
T  30934569 gacccg 30934564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 11549490 - 11549282
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||| ||||| |||    
T  11549490 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatataacatcggt 11549391  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  11549390 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 11549291  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  11549290 gttgacccg 11549282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 23718014 - 23718222
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||| ||||| |||    
T  23718014 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatataacatcggt 23718113  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  23718114 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 23718213  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  23718214 gttgacccg 23718222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 23752476 - 23752684
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||| ||||| |||    
T  23752476 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatataacatcggt 23752575  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  23752576 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 23752675  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  23752676 gttgacccg 23752684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22999140 - 22999348
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || || |||||  | |||||||| || || || || ||||||||||| |||    
T  22999140 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagttggaagcaactcagcatacaacatcggt 22999239  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  22999240 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 22999339  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  22999340 gttgacccg 22999348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24688183 - 24688391
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || |||||||| || |||    
T  24688183 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaatatcggt 24688282  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| | |  | |||||||||||| ||||    
T  24688283 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcaattgtattaacgggtacttgag 24688382  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  24688383 gttgacccg 24688391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 33777623 - 33777415
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  33777623 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 33777524  T
Q  113 atcggaggaaaggtaggtctagcttgttgac---gttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  33777523 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 33777424  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  33777423 gttgacccg 33777415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 32599498 - 32599698
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  32599498 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 32599597  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    || |||||||| || |||||||| | |||  | || |||||||||||||| || || ||||| |   ||||| ||| |||||| || || ||||||||||    
T  32599598 ataggaggaaaagttggtctagcatattgctgctgctgctgttgaactggcggttgatgttgtacctgctgagcgatggcattgacaggaacctgaggtt 32599697  T
Q  213 g 213  Q
    |    
T  32599698 g 32599698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 2511187 - 2511044
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  2511187 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 2511088  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  2511087 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 2511044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 8665501 - 8665644
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  8665501 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 8665600  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  8665601 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 8665644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 9548569 - 9548712
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || ||||| ||||| ||||| |||    
T  9548569 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaattcagcatataacatcggt 9548668  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  9548669 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 9548712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15758883 - 15759026
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  15758883 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 15758982  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  15758983 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 15759026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18375438 - 18375581
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || |  || |||||||||||||||    
T  18375438 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagaagatctgcatacaacattggt 18375537  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| |||||||||||||| |||  |||||| |||||    
T  18375538 ataggaggaaaagtaggtctagcttgctgattttgttgttgttg 18375581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 41674845 - 41674702
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || ||||| ||||| ||||| |||    
T  41674845 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaattcagcatataacatcggt 41674746  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  41674745 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 41674702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 37671509 - 37671630
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || |||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  37671509 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 37671608  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  37671609 ataggaggaaaagttggtctag 37671630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 6874441 - 6874298
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || |  || ||||| ||||| |||    
T  6874441 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcagctcagcatataacatcggt 6874342  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  6874341 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 6874298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 26480528 - 26480385
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  26480528 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 26480429  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  26480428 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 26480385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 33516492 - 33516349
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  33516492 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 33516393  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  33516392 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 33516349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 3789677 - 3789556
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  3789677 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 3789578  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  3789577 ataggaggaaaagttggtctag 3789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 28649371 - 28649250
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || || || |||||||||||||||    
T  28649371 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtaaagttggaagcaactcagcatacaacattggt 28649272  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  28649271 ataggaggaaaagttggtctag 28649250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5638046 - 5637903
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5638046 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 5637947  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  5637946 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 5637903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 9317587 - 9317444
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  9317587 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 9317488  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  9317487 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 9317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 12132291 - 12132148
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  12132291 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 12132192  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  12132191 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 12132148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15658786 - 15658929
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  15658786 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 15658885  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| || |||||||||||||| |||  |||||| |||||    
T  15658886 attggagggaaagtaggtctagcttgctgattttgttgttgttg 15658929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 30152154 - 30152011
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  30152154 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 30152055  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  30152054 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 30152011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 30168605 - 30168462
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  30168605 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 30168506  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  30168505 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 30168462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 31826433 - 31826552
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  31826433 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 31826532  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  31826533 ataggaggaaaagttggtct 31826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 28959812 - 28959934
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  28959812 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 28959911  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || |||||||| || ||||||||    
T  28959912 ataggaggaaaagttggtctagc 28959934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 218
Target Start/End: Complemental strand, 33292638 - 33292456
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || |  || ||||||||||||||||| |||||||| || ||||||||    
T  33292638 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggtataggaggaaaagttggtctagc 33292539  T
Q  136 ttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
     | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||| ||||    
T  33292538 atattgttgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggttggcccg 33292456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 34616654 - 34616505
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || || || |||||||||||||||    
T  34616654 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtagagttggaagcaactcagcatacaacattggt 34616555  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactgg 162  Q
    || |||||||| || |||||||| | |||  | || ||||||||||||||    
T  34616554 ataggaggaaaagttggtctagcatattgctgctgctgctgttgaactgg 34616505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 37358669 - 37358790
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  37358669 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtagagttggaagaagttccgcatacaacattggt 37358768  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  37358769 ataggaggaaaagttggtctag 37358790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 37771013 - 37771134
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || || |||||  | |||||||| || || || || |||||||||||||||    
T  37771013 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgacctctctggagtaaagttggaagcaactcagcatacaacattggt 37771112  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  37771113 ataggaggaaaagttggtctag 37771134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 13324878 - 13324976
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctag 134  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || | ||| ||||||||||||||||| |||||||| || |||||||    
T  13324878 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggtataggaggaaaagttggtctag 13324976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 31431576 - 31431466
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||| ||| || || || || |||||||||||||||    
T  31431576 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtagagttggaagcaactcagcatacaacattggt 31431477  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  31431476 ataggaggaaa 31431466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 18500756 - 18500877
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  18500756 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 18500855  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  18500856 ataggaggaaaagttggtctag 18500877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 37755116 - 37754995
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||| ||||| || || || || |||||  | |||||||| || || || || |||||||||||||||    
T  37755116 gaaccttggaggcaacggatcaggtggtggcttgccttgtctagtcgtacaatgacctctctggagtaaagttggaagcaactcagcatacaacattggt 37755017  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  37755016 ataggaggaaaagttggtctag 37754995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 29967092 - 29967235
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  29967092 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 29967191  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| ||||| || || ||||| |||  |||||| |||||    
T  29967192 ataggagggaaggttggcctggcttgctgattttgttgttgttg 29967235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 30029551 - 30029408
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  30029551 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 30029452  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| ||||| || || ||||| |||  |||||| |||||    
T  30029451 ataggagggaaggttggcctggcttgctgattttgttgttgttg 30029408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 43078388 - 43078269
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  43078388 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 43078289  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  43078288 ataggaggaaaagttggtct 43078269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 24681553 - 24681457
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  24681553 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 24681457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 24724080 - 24723984
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  24724080 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 24723984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 40473598 - 40473694
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  40473598 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 40473694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1900411 - 1900190
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| | |||||| || |||| |||||| |||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  1900411 gaggtcagaacgaaacctgagaagcaacggatcaggtggaggcttaccatgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggca 1900312  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1900311 tacagcattggtatcggaggaaaggtaggtctagcttgttgatgttgttgctgttgaactggtggctgttgttgcatttgctgaacgacggcattaacgg 1900212  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  1900211 gtacctgaggttgacccgatgg 1900190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15228024 - 15227803
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||    
T  15228024 gaggtcagaacggaacctgggaggcaatggatcaggtggaggcttaccctgtctggttgtacagtgccctctgagaagtagagtcgggagtaactcggca 15227925  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||||||  | ||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  15227924 tatagcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgttgttgagctggtggctgttgttgcatttgctgaacgacagcattaacgg 15227825  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  15227824 gtacctgaggttgacccgatgg 15227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 15285045 - 15285266
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |    
T  15285045 gaggtcagaccggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcgaaa 15285144  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||||||  | ||||| ||||||  ||||||||||||||||||| ||||||||| |||||||||||    
T  15285145 tatagcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgttgttgagttggtggctgttgttgcatttgctgaacgatggcattaacgg 15285244  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    | ||||||||||||||||||||    
T  15285245 gcacctgaggttgacccgatgg 15285266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 24460722 - 24460943
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  24460722 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 24460821  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  24460822 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 24460921  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  24460922 gtacctgaggttgacccgatgg 24460943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 14235650 - 14235866
Alignment:
Q  9 aatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacat 108  Q
    ||||||||||||||||||| || | | ||||||||||||||||||||||||| ||||||||| | ||||| | ||||||||| |  ||||||||||||||    
T  14235650 aatggaacctgggaggcaaagggttaggtggaggcttgccctgtctggttgtacagtgccctttaagaagcagagtcgggagcagctcggcatacaacat 14235749  T
Q  109 tggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttg---aactggtggctgttgttgcattcgctgaacgacggcattaacgggtacc 205  Q
    ||||||| |||||||||||||||||||||||||  | || || |||||   | | || ||||||||||||||| ||||| | | ||||||||||||||||    
T  14235750 tggtatcagaggaaaggtaggtctagcttgttgttgctgctgttgttgctgagccggcggctgttgttgcatttgctgagcaatggcattaacgggtacc 14235849  T
Q  206 tgaggttgacccgatgg 222  Q
    |  || |||||||||||    
T  14235850 tatgggtgacccgatgg 14235866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15391455 - 15391669
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| || | | |||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||| || |||||     
T  15391455 gaggtcagaacggaacctgggaggcaacgggttaggtggaggcttcccctgcctggttgtgcagtgccctttgagaagcaaagtcgggagcaactcggcg 15391554  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||| ||||||||||||||||||||||||||| | |||||   | || || |||||| |  | |||||||| |||||| ||||| | | |||||| | ||    
T  15391555 tacagcattggtatcggaggaaaggtaggtctggtttgtt---gctgctgttgttgagccagcggctgttgctgcatttgctgagcaatggcattgatgg 15391651  T
Q  201 gtacctgaggttgacccg 218  Q
    ||||||||||||||||||    
T  15391652 gtacctgaggttgacccg 15391669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 17014142 - 17013934
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  17014142 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctttggagtaaagtcggaagcaactcagcatacaacatcggt 17014043  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| | |  |||||||||||||| ||||    
T  17014042 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgag 17013943  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  17013942 gttgacccg 17013934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24592443 - 24592648
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  24592443 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 24592542  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||| ||   |||||||| |||  | ||| |||  |||||||||||||| |||||||    
T  24592543 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaaccggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgaggtt 24592642  T
Q  213 gacccg 218  Q
    ||||||    
T  24592643 gacccg 24592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 14665160 - 14664952
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || || |||||  | |||||||| || || || || ||||||||||| |||    
T  14665160 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagttggaagcaactcagcatacaacatcggt 14665061  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  14665060 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 14664961  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  14664960 gttgacccg 14664952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 6569995 - 6569787
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  6569995 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 6569896  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    |||||||||||||||||||   |||||||| |||  | ||  | |  |||||||||||||| ||||    
T  6569895 atcggagggaaagtaggtctagcttgctgattttgttgttgctgttgaactggcatctgttgtttcatctgttgggcaattgcattaacgggtacttgag 6569796  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  6569795 gttgacccg 6569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 14098683 - 14098540
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  14098683 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 14098584  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| |||||||||||||| |||  |||||| |||||    
T  14098583 ataggaggaaaagtaggtctagcttgctgattttgttgttgttg 14098540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 14763433 - 14763576
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  14763433 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 14763532  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  14763533 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 14763576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 18800742 - 18800863
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || || || |||||||||||||||    
T  18800742 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtaaagttggaagcaactcagcatacaacattggt 18800841  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  18800842 ataggaggaaaagttggtctag 18800863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5006015 - 5005872
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||| ||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5006015 gaaccttggaggcaacggatcaggtgggggcttgccttgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 5005916  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  5005915 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 5005872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 27163446 - 27163589
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  27163446 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 27163545  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  27163546 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 27163589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 30753896 - 30753777
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  30753896 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 30753797  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  30753796 ataggaggaaaagttggtct 30753777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 40105767 - 40105910
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || | ||| ||||| ||||| |||    
T  40105767 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtaaagttggaagaagttcagcatataacatcggt 40105866  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  40105867 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 40105910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 218
Target Start/End: Complemental strand, 24112781 - 24112599
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || |  || ||||||||||||||||| |||||||| || ||||||||    
T  24112781 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggtataggaggaaaagttggtctagc 24112682  T
Q  136 ttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
     | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||| ||||    
T  24112681 atattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggttggcccg 24112599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 218
Target Start/End: Original strand, 34189112 - 34189294
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || |  || ||||||||||||||||| |||||||| || ||||||||    
T  34189112 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggtataggaggaaaagttggtctagc 34189211  T
Q  136 ttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
     | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||| ||||    
T  34189212 atattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggttggcccg 34189294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 36344644 - 36344849
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || |  || ||||||||||| |||    
T  36344644 gaacctcggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacataggt 36344743  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    || |||||||| || |||||||  | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||    
T  36344744 ataggaggaaaagttggtctagtatattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacaggaacctgaggtt 36344843  T
Q  213 gacccg 218  Q
    | ||||    
T  36344844 ggcccg 36344849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 31126647 - 31126790
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || |  || |||||||||||||||    
T  31126647 gaaccttggaggcaacgggtcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagctctgcatacaacattggt 31126746  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  31126747 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 31126790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 33673927 - 33674046
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||  |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  33673927 gaaccttggaggcaacgggtccggtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 33674026  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  33674027 ataggaggaaaagttggtct 33674046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 54833529 - 54833408
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||| |||| ||||||||||| || ||||| || ||||||||  | |||||||| || || |  || ||||||||||| |||    
T  54833529 gaaccttggaggcaacgggtcaggtgggggcttgccctgcctagttgtacaatgccctctttggagtaaagttggaagaagctctgcatacaacataggt 54833430  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  54833429 ataggaggaaaagttggtctag 54833408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 21969758 - 21969700
Alignment:
Q  98 gcatacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    ||||||||||||||||| |||||||| ||||| |||||||| |||  |||||| |||||    
T  21969758 gcatacaacattggtataggaggaaaagtaggcctagcttgctgattttgttgttgttg 21969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 39850757 - 39850661
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  39850757 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 39850661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 21703270 - 21703491
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| || |||    
T  21703270 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgtcctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcagca 21703369  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  21703370 tacaacattggtatcggagggaaggtaggtctagcttgttgatgctgttgttgttgaactggtggctgttgttgcatttgttgaacgacggcattaacgg 21703469  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  21703470 gtacctgaggttgacccgatgg 21703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 19456527 - 19456748
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  19456527 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctatgagaagtagagtcgggagtaactcggca 19456626  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||||||  | ||||| |||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  19456627 tatagcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgttgttgagctggtggctgttgttgcatttgctaaacgatggcattaacgg 19456726  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    | ||||||||||||||||||||    
T  19456727 gcacctgaggttgacccgatgg 19456748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27118823 - 27118602
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  27118823 gaggtccgaacggaacttgggaggcgacggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 27118724  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||||||| ||||||||||| ||||||||||||||||||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  27118723 tacaacatcggtatcggagggaaggtaggtctagcttgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgg 27118624  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  27118623 gtacctgaggttgacccgatgg 27118602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 16163734 - 16163513
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  16163734 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 16163635  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  16163634 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 16163535  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  16163534 gtacctgaggttgacccgatgg 16163513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 13 - 222
Target Start/End: Original strand, 31891446 - 31891655
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  31891446 gaaccttggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagcatataacattggt 31891545  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    ||| |||||||||||||||||||||||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31891546 atcagaggaaaggtaggtctagcttgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 31891645  T
Q  213 gacccgatgg 222  Q
    | ||||||||    
T  31891646 gtcccgatgg 31891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 34157146 - 34156925
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  34157146 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 34157047  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  34157046 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 34156947  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  34156946 gtacctgaggttgacccgatgg 34156925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3784789 - 3784568
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  3784789 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 3784690  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||    ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  3784689 tataacattggtatcagaggaaaggtaggtctagcctgttgctactgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 3784590  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  3784589 gtacctgaggttgacccgatgg 3784568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 34303409 - 34303630
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  34303409 gaggtccgaacggaacttgggaggcgacggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 34303508  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| |||||||||||||||||||||||||  | ||| | |||||| |||| |||||||||||||||||||| |||||| |||||||||    
T  34303509 tataacattggtatcagaggaaaggtaggtctagcttgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacgacattaacgg 34303608  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  34303609 gtacctgaggttgacccgatgg 34303630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 27393104 - 27392964
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    ||||||||||||||||||||||||||| || | | |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |  ||||||    
T  27393104 gaggtcagaatggaacctgggaggcaacgggttaggtggaggcttgccctgcctggttgtgcagtgccctttgagaagcaaagtcgggagcagctcggca 27393005  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    |||| ||||||||||||||||||||||||||| | ||||||    
T  27393004 tacatcattggtatcggaggaaaggtaggtctggtttgttg 27392964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 23128684 - 23128892
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  23128684 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 23128783  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  23128784 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 23128883  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  23128884 gttgacccg 23128892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 28882337 - 28882129
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  28882337 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 28882238  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  28882237 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 28882138  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  28882137 gttgacccg 28882129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 12655665 - 12655457
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  12655665 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 12655566  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  12655565 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 12655466  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  12655465 gttgacccg 12655457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 20838041 - 20837833
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||||||||||||  ||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  20838041 gaacctgggaggcaacagatcaggtgggggcttgccctgtctagttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 20837942  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  20837941 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 20837842  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  20837841 gttgacccg 20837833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 27434562 - 27434770
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||| |||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||| ||| || || || ||||||||||| |||    
T  27434562 gaacttgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagccggaagcaactcagcatacaacatcggt 27434661  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  |||||||||||||| ||||    
T  27434662 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgag 27434761  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  27434762 gttgacccg 27434770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 11635304 - 11635447
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  11635304 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 11635403  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  11635404 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 11635447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 21677300 - 21677443
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  21677300 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 21677399  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  21677400 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 21677443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 11641493 - 11641636
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| |||||  ||    
T  11641493 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatctgt 11641592  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  11641593 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 11641636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 16829456 - 16829599
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  16829456 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 16829555  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  16829556 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 16829599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 16892025 - 16891882
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  16892025 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 16891926  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  16891925 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 16891882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 22926146 - 22926289
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  22926146 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 22926245  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  22926246 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 22926289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 34279572 - 34279429
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  34279572 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 34279473  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  34279472 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 34279429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 31876404 - 31876261
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || | ||| || ||||||||||||    
T  31876404 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagttccgcgtacaacattggt 31876305  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  31876304 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 31876261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 34286477 - 34286334
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  34286477 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 34286378  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| || |||||||||||||| |||  |||||| |||||    
T  34286377 attggagggaaagtaggtctagcttgctgattttgttgttgttg 34286334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 34291537 - 34291394
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  34291537 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 34291438  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| || |||||||||||||| |||  |||||| |||||    
T  34291437 attggagggaaagtaggtctagcttgctgattttgttgttgttg 34291394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 34861803 - 34861660
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  34861803 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 34861704  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  34861703 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 34861660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 37686027 - 37686170
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  37686027 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 37686126  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  37686127 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 37686170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 37701292 - 37701435
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  37701292 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 37701391  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  37701392 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 37701435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40233646 - 40233515
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || |  || |||    
T  40233646 gaggtcagaccggaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagctcagca 40233547  T
Q  101 tacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||| |||||||| || |||||    
T  40233546 tacaacattggtataggaggaaaagttggtct 40233515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 39890197 - 39890075
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  39890197 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 39890098  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || |||||||| || ||||||||    
T  39890097 ataggaggaaaagttggtctagc 39890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 37925616 - 37925473
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||  |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| |||||||||    
T  37925616 gaaccttggaggcaacgggtcgggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacattggt 37925517  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  37925516 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 37925473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 260871 - 260981
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||||||  ||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  260871 gaaccttggaggcaacagatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 260970  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  260971 ataggaggaaa 260981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 37375284 - 37375163
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || |  || ||||||||||| |||    
T  37375284 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacataggt 37375185  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  37375184 ataggaggaaaagttggtctag 37375163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 13936685 - 13936805
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||||||||| || |||||||| ||    
T  13936685 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtatcggagggaaagtaggtctggc 13936784  T
Q  136 ttgttgacgttgttgctgttg 156  Q
    ||| |||| ||| || |||||    
T  13936785 ttgctgactttgctgttgttg 13936805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 27392961 - 27392908
Alignment:
Q  165 gctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
    |||||||||||||| ||||| | | |||||| ||||||||||||||||||||||    
T  27392961 gctgttgttgcatttgctgagcaatggcattgacgggtacctgaggttgacccg 27392908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 32049921 - 32049778
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||  |||| || || |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  32049921 gaaccttggaggcaacgggtccggtgggggtttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 32049822  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  32049821 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 32049778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 12716743 - 12716839
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  12716743 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 12716839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 27777322 - 27777226
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  27777322 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 27777226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 27803807 - 27803711
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  27803807 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 27803711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 27817080 - 27816984
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  27817080 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 27816984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 39051963 - 39052059
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  39051963 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 39052059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16208148 - 16208366
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| |||| |    
T  16208148 gaggtcagaacggaacctgggaggcaacggatcaggtggaggttttccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggta 16208247  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||||| ||||||||| |||||||| ||    
T  16208248 tacaacattggtatcggaggaaaggtaggtctagcttgttga---tgttgttgttgaactggtggctgttgttgcatttgctgaacgatggcattaatgg 16208344  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    |||||||||| |||||||||||    
T  16208345 gtacctgaggctgacccgatgg 16208366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 20340452 - 20340673
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||||| ||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||  ||||||    
T  20340452 gaggtcagaacggaacctaggaggtaacggatcaggtggaggcttgccctgtctggttgtgtagtgccctctgagaagtagagttgggagtagctcggca 20340551  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||| ||| | ||||| |||||| |||| ||||||||||||||| | |||||||||||||| ||||    
T  20340552 tatagcattggtatcggaggaaaggtaggtctagcttgctgatgctgttgttgttgagctggaggctgttgttgcatttgttgaacgacggcattgacgg 20340651  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  20340652 gtacctgaggttgacccgatgg 20340673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20461219 - 20461069
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20461219 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcggca 20461120  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgc 151  Q
    || | |||| |||||||||||||||||||||||||||||||  ||||||||    
T  20461119 tatagcattagtatcggaggaaaggtaggtctagcttgttgctgttgttgc 20461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28152000 - 28151860
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||| ||||||||| ||  ||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  28152000 gaggtcagaccggagcctgggaggtaacagatcaggtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 28151901  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  28151900 tatagcattggtatcagaggaaaggtaggtctagcttgttg 28151860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 41793437 - 41793580
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  41793437 gaaccttggaggcaacggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 41793536  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  41793537 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 41793580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 20461079 - 20461022
Alignment:
Q  165 gctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccgatgg 222  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  20461079 gctgttgttgcatttgctgaacgatggcattaacgggtacctgaggttgacccgatgg 20461022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 28585107 - 28584964
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  28585107 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 28585008  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  28585007 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 28584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10962796 - 10962653
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | || ||||| || || || || ||||| ||||| |||    
T  10962796 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagcaaagttggaagcaactcagcatataacatcggt 10962697  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  10962696 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 10962653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 51638344 - 51638201
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||| |||| ||||| ||||| || || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  51638344 gaaccttggaggcaacgggtcaggtgggggcttaccctgcctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 51638245  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||| ||| || ||||| |||||||| |||  |||||| |||||    
T  51638244 atcgaagggaaagtaggcctagcttgctgattttgttgttgttg 51638201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 8e-82; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 28162793 - 28162572
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  28162793 gaggtccgaacggaacttgggaggcgatggatcaagtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 28162694  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| |||||||||||||||||||||||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  28162693 tataacattggtatcagaggaaaggtaggtctagcttgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgg 28162594  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||| ||||||||    
T  28162593 gtacctgaggttgtcccgatgg 28162572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8892370 - 8892591
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  8892370 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 8892469  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  8892470 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgg 8892569  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  8892570 gtacctgaggttgacccgatgg 8892591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 8903605 - 8903826
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  8903605 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 8903704  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||||||||||||||||||||    
T  8903705 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacgacggcattaacgg 8903804  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  8903805 gtacctgaggttgacccgatgg 8903826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 13522133 - 13522354
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  13522133 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 13522232  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  13522233 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 13522332  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  13522333 gtacctgaggttgacccgatgg 13522354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33374316 - 33374537
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  33374316 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 33374415  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  33374416 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 33374515  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  33374516 gtacctgaggttgacccgatgg 33374537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 22477333 - 22477557
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    ||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||    
T  22477333 gaggttagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccatatgagaagtagagtcgggagtaactcggca 22477432  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgtt---gttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaa 197  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||   |||| |||||||| |||| ||||||||||||| | ||| | |  |||||||    
T  22477433 tacatcattggtatcagaggaaaggtaggtctagcttgttgctgttgtcgttgttgttgaaccggtgactgttgttgcatttgttgagcaattgcattaa 22477532  T
Q  198 cgggtacctgaggttgacccgatgg 222  Q
    |||||||||||||||||||||||||    
T  22477533 cgggtacctgaggttgacccgatgg 22477557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 20160825 - 20160620
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||||||||| || |||||| ||||||||||||| || ||||||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||    
T  20160825 gaacctgggaggtaacggatcaggtggaggcttgccttgcctggttgtgcaatgccctctgtgaagtaaagttgggagtaactcagcatataacatcggt 20160726  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||||||||||||||||| ||||||  ||||||| |||||| ||||||||||||| ||  || ||||| | | |||||||||||||||||||||||    
T  20160725 atcggaggaaaggtaggtctagtttgttgctgttgttgttgttgagctggtggctgttgctgtttttgctgagcaatggcattaacgggtacctgaggtt 20160626  T
Q  213 gacccg 218  Q
    ||||||    
T  20160625 gacccg 20160620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22172006 - 22172211
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||||||||| || |||||| ||||||||||||| || ||||||||||| ||||||||| |||||||||| |||||||| || ||||| ||||| |||    
T  22172006 gaacctgggaggtaacggatcaggtggaggcttgccttgcctggttgtgcaatgccctctgtgaagtaaagttgggagtaactcagcatataacatcggt 22172105  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||||||||||||||||| ||||||  ||||||| |||||| ||||||||||||| ||  || ||||| | | |||||||||||||||||||||||    
T  22172106 atcggaggaaaggtaggtctagtttgttgctgttgttgttgttgagctggtggctgttgctgtttttgctgagcaatggcattaacgggtacctgaggtt 22172205  T
Q  213 gacccg 218  Q
    ||||||    
T  22172206 gacccg 22172211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 22456994 - 22457174
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    ||||| |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||    
T  22456994 gaggtaagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccttatgagaagtagagtcgggagtaactcggca 22457093  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgtt---gttgctgttgaactggtggctgttgttgcatt 178  Q
    |||| |||||||||| |||||||||||||||||||||||||  |||   |||| |||||||| |||| |||||||||||||    
T  22457094 tacatcattggtatcagaggaaaggtaggtctagcttgttgctgttgtcgttgttgttgaaccggtgactgttgttgcatt 22457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 27290430 - 27290566
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||| ||||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||| || || |||    
T  27290430 gaggtcagaacggaacttgggaggtaacggatcaggtggaggcttgccctgtctggttgtgtagtgccctctgagaagtagagtcgggagcaactcagca 27290529  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagctt 137  Q
    || |||||||||||| |||||||||||||||||||||    
T  27290530 tataacattggtatcagaggaaaggtaggtctagctt 27290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 14143345 - 14143485
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||| || || |||    
T  14143345 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgcgcagtgccctctgagaagtagagtcgggagcaactcagca 14143444  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  14143445 tatagcattggtatcagaggaaaggtaggtctagcttgttg 14143485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26788080 - 26787940
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||| || || |||    
T  26788080 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgcgcagtgccctctgagaagtagagtcgggagcaactcagca 26787981  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  26787980 tatagcattggtatcagaggaaaggtaggtctagcttgttg 26787940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 27196453 - 27196313
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||| || || |||    
T  27196453 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgcgcagtgccctctgagaagtagagtcgggagcaactcagca 27196354  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  27196353 tatagcattggtatcagaggaaaggtaggtctagcttgttg 27196313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27252787 - 27252927
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||| || || |||    
T  27252787 gaggtcagaccggaacctgggaggtaacggatcaggtggaggcttcccctgtctgattgcgcagtgccctctgagaagtagagtcgggagcaactcagca 27252886  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  27252887 tatagcattggtatcagaggaaaggtaggtctagcttgttg 27252927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22934952 - 22935157
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||| ||||| |||    
T  22934952 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatataacatcggt 22935051  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||| ||   |||||||| |||  | ||| | |  ||||| ||||||||||||||||    
T  22935052 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattgacgggtacctgaggtt 22935151  T
Q  213 gacccg 218  Q
    ||||||    
T  22935152 gacccg 22935157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 23857397 - 23857602
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||| ||||| |||    
T  23857397 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatataacatcggt 23857496  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||| ||   |||||||| |||  | ||| | |  ||||| ||||||||||||||||    
T  23857497 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattgacgggtacctgaggtt 23857596  T
Q  213 gacccg 218  Q
    ||||||    
T  23857597 gacccg 23857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 13299023 - 13299231
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  13299023 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 13299122  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  13299123 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 13299222  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  13299223 gttgacccg 13299231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 15424389 - 15424597
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  15424389 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 15424488  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg---aactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||  |||||| |||||   ||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  15424489 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttcaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 15424588  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  15424589 gttgacccg 15424597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 24304690 - 24304898
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  24304690 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 24304789  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  24304790 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggaaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 24304889  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  24304890 gttgacccg 24304898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 26918504 - 26918361
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  26918504 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 26918405  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  26918404 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 26918361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 26989125 - 26988917
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||| ||||| |||    
T  26989125 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatataacatcggt 26989026  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg---aactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||  |||||| |||||   ||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  26989025 atcggagggaaagtaggtctagcttgctgattttgttgatgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 26988926  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  26988925 gttgacccg 26988917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 27000197 - 26999989
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  27000197 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 27000098  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  |||||||||||||| ||||    
T  27000097 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgag 26999998  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  26999997 gttgacccg 26999989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 24863841 - 24863698
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  24863841 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 24863742  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  24863741 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 24863698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 16749978 - 16749770
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  16749978 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 16749879  T
Q  113 atcggaggaaaggtaggtctagcttgttgac---gttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  16749878 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 16749779  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  16749778 gttgacccg 16749770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4525410 - 4525289
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| |||||||| || |||||  | |||||||| || || || || |||||||||||||||    
T  4525410 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtgcaatgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 4525311  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  4525310 ataggaggaaaagttggtctag 4525289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 29573137 - 29572994
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| ||||| || || |||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  29573137 gaaccttggaggcaacggatcaggtgggggcttaccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 29573038  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| || ||||||||||| |||  |||||| |||||    
T  29573037 ataggaggaaaagttggtctagcttgctgattttgttgttgttg 29572994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 30558088 - 30558231
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  30558088 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 30558187  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| ||||| |||||||| |||  |||||| |||||    
T  30558188 ataggaggaaaagtaggcctagcttgctgattttgttgttgttg 30558231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4773130 - 4773009
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  4773130 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 4773031  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  4773030 ataggaggaaaagttggtctag 4773009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 27007851 - 27007730
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  27007851 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 27007752  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  27007751 ataggaggaaaagttggtctag 27007730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 27485253 - 27485132
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||||||| || || | ||| |||||||||||||||    
T  27485253 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 27485154  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  27485153 ataggaggaaaagttggtctag 27485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 3696205 - 3696086
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||||||| || || || || |||||||||||||||    
T  3696205 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctctggagtaaagttggaagcaactcagcatacaacattggt 3696106  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  3696105 ataggaggaaaagttggtct 3696086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 27272652 - 27272771
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||| | |||||| |||| ||||| |||||||||||||| || ||||||||  | |||| |||||| || || || ||||| ||||| |||    
T  27272652 gaacctgggaggcgacggatcaggtgggggcttaccctgtctggttgtacaatgccctctctggagtagagtcggaagcaactcagcatataacatcggt 27272751  T
Q  113 atcggaggaaaggtaggtct 132  Q
    |||||||| || ||||||||    
T  27272752 atcggagggaaagtaggtct 27272771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 26777687 - 26777809
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||| ||| || || | ||||||||||||||| |||    
T  26777687 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtagagttggaagaagttcggcatacaacatcggt 26777786  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || ||||| ||||| ||||||||    
T  26777787 ataggagggaaggttggtctagc 26777809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 4757888 - 4757767
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||||||| || || || || |||||||||||||||    
T  4757888 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 4757789  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  4757788 ataggaggaaaagttggtctag 4757767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 26116482 - 26116603
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || || |||||  | ||||||||||| || | ||| ||||||||||| |||    
T  26116482 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgacctctctggagtaaagtcggaagaagttctgcatacaacatcggt 26116581  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  26116582 ataggaggaaaagttggtctag 26116603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 29501539 - 29501418
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  29501539 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 29501440  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || ||||| ||||| |||||||    
T  29501439 ataggagggaaggttggtctag 29501418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 29549599 - 29549394
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || |  || |||||||||||||||    
T  29549599 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagctctgcatacaacattggt 29549500  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    || |||||||| || |||||||| | |||  | || || ||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||    
T  29549499 ataggaggaaaagttggtctagcgtattgctgctgctgttgttgaactggcggttgatgttgcacctgttgagcgatggcattgacaggaacctgaggtt 29549400  T
Q  213 gacccg 218  Q
    | ||||    
T  29549399 ggcccg 29549394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 16674263 - 16674144
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || |  || |||||||||||||||    
T  16674263 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggt 16674164  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  16674163 ataggaggaaaagttggtct 16674144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 27044511 - 27044390
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || |  || ||||||||||| |||    
T  27044511 gaaccttggaggcaacgggtcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagaagctctgcatacaacataggt 27044412  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  27044411 ataggaggaaaagttggtctag 27044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 4545847 - 4545957
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || || || |||||||||||||||    
T  4545847 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtagagttggaagcaactcagcatacaacattggt 4545946  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  4545947 ataggaggaaa 4545957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Original strand, 4724206 - 4724316
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||| ||||| || || || ||||||||  | |||| ||| || || || || |||||||||||||||    
T  4724206 gaaccttggaggcaacggatcaggtggtggcttgccttgtctagtcgtacaatgccctctctggagtagagttggaagcaactcagcatacaacattggt 4724305  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  4724306 ataggaggaaa 4724316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 17025378 - 17025280
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctag 134  Q
    |||||||||||||||| || || |||||||| |||||  | |||| ||| || || | ||| ||||||||||||||||| |||||||| || |||||||    
T  17025378 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtagagttggaagaagttctgcatacaacattggtataggaggaaaagttggtctag 17025280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 28207578 - 28207468
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||| ||||| || || || ||||||||  | |||| ||| || || || || |||||||||||||||    
T  28207578 gaaccttggaggcaacggatcaggtggtggcttgccttgtctagtcgtacaatgccctctctggagtagagttggaagcaactcagcatacaacattggt 28207479  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  28207478 ataggaggaaa 28207468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 27360064 - 27360185
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  27360064 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtagagttggaagaagttctgcatacaacatcggt 27360163  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  27360164 ataggaggaaaagttggtctag 27360185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 27450407 - 27450528
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  27450407 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtagagttggaagaagttctgcatacaacatcggt 27450506  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  27450507 ataggaggaaaagttggtctag 27450528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 16944099 - 16944248
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  16944099 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacatcggt 16944198  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaac 159  Q
    || ||||| ||||| || || ||||| |||    ||||||||||||||||    
T  16944199 ataggagggaaggttggcctggcttgctgattttgttgttgctgttgaac 16944248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 5e-80; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 18530488 - 18530273
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| || |||    
T  18530488 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcaggagtaactcagca 18530389  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||||||||||||||||||||||||||||||||||||      |||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  18530388 tacaacattggtatcggaggaaaggtaggtctagctt------gttgctgctgttgagctggtggctgttgttgcatttgctgaacgacggcattaacgg 18530295  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    | || |||||||||||||||||    
T  18530294 gcacttgaggttgacccgatgg 18530273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16626664 - 16626885
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||| ||    
T  16626664 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctaagaagtagagtagggagtaactcgaca 16626763  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||||||  | ||||| |||||| |||||||||||||||||||| ||||||||| |||||||||||    
T  16626764 tatatcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgttgttgagctggtggctgttgttgcatttgctgaacgatggcattaacgg 16626863  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||| ||||||||||||||||    
T  16626864 gtaccggaggttgacccgatgg 16626885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17993942 - 17994163
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  17993942 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 17994041  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  17994042 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 17994141  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  17994142 gtacctgaggttgacccgatgg 17994163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 4626044 - 4625823
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  4626044 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagtaattcagca 4625945  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| |||||| |||||||||    
T  4625944 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacgacattaacgg 4625845  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  4625844 gtacctgaggttgacccgatgg 4625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 5652487 - 5652268
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| | || ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||    
T  5652487 gaggtccgaacggaacttgggaggcgacgggtcaggtgaaggcttgccctgtctggttgtgcagtgccctttgaggagtagagtcgggagtaattcagca 5652388  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  5652387 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 5652288  T
Q  201 gtacctgaggttgacccgat 220  Q
    ||||||||||||||||||||    
T  5652287 gtacctgaggttgacccgat 5652268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 32292852 - 32292712
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||||||||| || |||||| |||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  32292852 gaggtcagaccggaacctgggaggtaacggatcaggtggagacttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 32292753  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| |||||||||||||||||||||||||    
T  32292752 tatagcattggtatcagaggaaaggtaggtctagcttgttg 32292712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15892876 - 15893019
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || |||||||||||||||    
T  15892876 gaacctgggaggcaaaggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacattggt 15892975  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||||||| ||||||| |||||    
T  15892976 atcggagggaaagtaggtctagcttgttgatgttgttgttgttg 15893019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 8301437 - 8301642
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  8301437 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 8301536  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||||||   |||||||| |||  | ||| | |  |||||||||||||| |||||||    
T  8301537 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaactggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgaggtt 8301636  T
Q  213 gacccg 218  Q
    ||||||    
T  8301637 gacccg 8301642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31034275 - 31034415
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||  ||||||| ||||| || |||||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| || || |||    
T  31034275 gaggtcagaccggaacctaggaggtaacggatcaggtggaggcttcccctgtctgattgtgcagtgccctctgagaagtagagtcgggagcaactcagca 31034374  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || | |||||||||| ||||||||||||||||||| |||||    
T  31034375 tatagcattggtatcagaggaaaggtaggtctagcctgttg 31034415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 8296060 - 8295855
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||||||||||||  ||||| || | |||||||||||||||||||| || ||||||||| | ||||||||||| || || || ||||||||||| |||    
T  8296060 gaacctgggaggcaacagatcaggtaggggcttgccctgtctggttgtacaatgccctctgtggagtaaagtcggaagcaactcagcatacaacatcggt 8295961  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| ||||||| |||   |||||||| |||  | ||| |||  |||||||| ||||| |||||||    
T  8295960 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaattggcaactgttgtttcatctgttgagcgattgcattaacaggtacttgaggtt 8295861  T
Q  213 gacccg 218  Q
    ||||||    
T  8295860 gacccg 8295855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 18051350 - 18051142
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||  |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||||||||| |||    
T  18051350 gaacctgggaggcagcggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatacaacatcggt 18051251  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  18051250 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 18051151  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  18051150 gttgacccg 18051142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 18330757 - 18330549
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||| ||||| || || || ||||| ||||| |||    
T  18330757 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaggtcggaagcaactcagcatataacatcggt 18330658  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  18330657 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 18330558  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  18330557 gttgacccg 18330549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 4796823 - 4797031
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  4796823 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 4796922  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  |||||||||||||| ||||    
T  4796923 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattaacgggtacttgag 4797022  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  4797023 gttgacccg 4797031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22387748 - 22387953
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || |||||||||||||||    
T  22387748 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactctgcatacaacattggt 22387847  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    || |||||||| || |||||||| | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||    
T  22387848 ataggaggaaaagtcggtctagcatattgttgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggtt 22387947  T
Q  213 gacccg 218  Q
    | ||||    
T  22387948 ggcccg 22387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 28116124 - 28116267
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| ||||||||||| |||||||||||||| ||||| || ||||||||  | |||||||| || || ||||| ||||| ||||| |||    
T  28116124 gaaccttggaggcaacggatcaagtgggggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaattcagcatataacatcggt 28116223  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  28116224 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 28116267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 29148925 - 29149133
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||||||||| |||    
T  29148925 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctatggagtaaagttggaagcaactcagcatacaacatcggt 29149024  T
Q  113 atcggaggaaaggtaggtctagcttgttgac---gttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| |||  ||||||||||| || ||||    
T  29149025 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcgattgcattaacgggcacttgag 29149124  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  29149125 gttgacccg 29149133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 35880854 - 35880646
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||  |||||| |||| |||||||||||| ||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  35880854 gaaccttggaggcagcggatcaggtgggggcttgccctgtttggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 35880755  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  35880754 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 35880655  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  35880654 gttgacccg 35880646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 6542632 - 6542753
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  6542632 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 6542731  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  6542732 ataggaggaaaagttggtctag 6542753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 4721719 - 4721576
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||  |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  4721719 gaaccttggaggcagcggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 4721620  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  4721619 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 4721576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10396221 - 10396078
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||||||||| |||||  | |||||||| || || |  || ||||||||||| |||    
T  10396221 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacataggt 10396122  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  10396121 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 10396078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15741264 - 15741407
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| | |||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  15741264 gaaccttggaggcaacgaatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 15741363  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  15741364 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 15741407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 17985126 - 17985269
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || |  || |||||||||||||||    
T  17985126 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagctctgcatacaacattggt 17985225  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| |||||||||||||| |||  |||||| |||||    
T  17985226 ataggaggaaaagtaggtctagcttgctgattttgttgttgttg 17985269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 6192404 - 6192196
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||   ||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  6192404 gaaccttggaggcagcagatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 6192305  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| | |  ||||| |||||||| ||||    
T  6192304 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcaattgcattgacgggtacttgag 6192205  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  6192204 gttgacccg 6192196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 162
Target Start/End: Original strand, 4346857 - 4347006
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  4346857 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 4346956  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactgg 162  Q
    || |||||||| || |||||||| | |||  | || ||||||||||||||    
T  4346957 ataggaggaaaagttggtctagcatattgctgctgctgctgttgaactgg 4347006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 13 - 162
Target Start/End: Complemental strand, 28021363 - 28021214
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||| ||||||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  28021363 gaaccttggaggtaatggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtatagttggaagaagttctgcatacaacattggt 28021264  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactgg 162  Q
    || |||||||| || |||||||| | |||  | || ||||||||||||||    
T  28021263 ataggaggaaaagttggtctagcatattgctgctgctgctgttgaactgg 28021214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 5609492 - 5609635
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5609492 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 5609591  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  5609592 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 5609635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 11110519 - 11110638
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||||||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  11110519 gaaccttggaggcaacggatcaggtggaggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 11110618  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  11110619 ataggaggaaaagttggtct 11110638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 18225279 - 18225136
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  18225279 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 18225180  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| |||||||| ||||||||||||  |||||| |||||    
T  18225179 ataggagggaaggtaggcctagcttgttgattttgttgttgttg 18225136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18277222 - 18277365
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||||||  ||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  18277222 gaaccttggaggcaactgatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 18277321  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  18277322 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 18277365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18292523 - 18292666
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||||||  ||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  18292523 gaaccttggaggcaactgatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 18292622  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  18292623 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 18292666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 18307824 - 18307967
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| ||||||||  ||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  18307824 gaaccttggaggcaactgatcaggtgggggcttgccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 18307923  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  18307924 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 18307967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 21674781 - 21674638
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  21674781 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagtcgtacaatgccctctttggagtagagttggaagaagttctgcatacaacattggt 21674682  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| || ||||||||||| |||  |||||| |||||    
T  21674681 ataggaggaaaagttggtctagcttgctgattttgttgttgttg 21674638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 28339390 - 28339247
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  28339390 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 28339291  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  28339290 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 28339247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 31964643 - 31964786
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  31964643 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 31964742  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  31964743 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 31964786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 50134241 - 50134384
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  50134241 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 50134340  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  50134341 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 50134384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 218
Target Start/End: Complemental strand, 32439219 - 32439037
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctagc 135  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || | ||| ||||||||||||||||| |||||||| || ||||||||    
T  32439219 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagttctgcatacaacattggtataggaggaaaagttggtctagc 32439120  T
Q  136 ttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggttgacccg 218  Q
     | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||||||||||| ||||    
T  32439119 atattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggacctgaggttggcccg 32439037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 18242827 - 18242706
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||||||| || || | ||| |||||||||||||||    
T  18242827 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgtcctctctggagtaaagttggaagaagttctgcatacaacattggt 18242728  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  18242727 ataggaggaaaagttggtctag 18242706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 4417007 - 4416864
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| || ||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  4417007 gaaccttggaggcaacggatcaggtgggggtttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 4416908  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  4416907 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 4416864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5713315 - 5713172
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5713315 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 5713216  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||| ||||| |||  |||||| |||||    
T  5713215 atcggagggaaagtaggtctggcttgctgattttgttgttgttg 5713172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5724225 - 5724082
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5724225 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 5724126  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||| ||||| |||  |||||| |||||    
T  5724125 atcggagggaaagtaggtctggcttgctgattttgttgttgttg 5724082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 5757252 - 5757395
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5757252 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 5757351  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||| ||||| |||  |||||| |||||    
T  5757352 atcggagggaaagtaggtctggcttgctgattttgttgttgttg 5757395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 5768143 - 5768286
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  5768143 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 5768242  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||| ||||| |||  |||||| |||||    
T  5768243 atcggagggaaagtaggtctggcttgctgattttgttgttgttg 5768286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 7996650 - 7996507
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  7996650 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 7996551  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  7996550 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 7996507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 10643158 - 10643015
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  10643158 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 10643059  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  10643058 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 10643015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 47023541 - 47023398
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  47023541 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 47023442  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  47023441 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 47023398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 48466015 - 48465896
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || | ||| |||||||||||||||    
T  48466015 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctttggagtaaagttggaagaagttctgcatacaacattggt 48465916  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  48465915 ataggaggaaaagttggtct 48465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 4893306 - 4893093
Alignment:
Q  5 tcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcataca 104  Q
    ||||| |||||||| ||||| || || ||  ||||||| |||||||| || || |||||||| |||||  | |||||||| || || |  || |||||||    
T  4893306 tcagagtggaaccttggaggtaaagggtccggtggaggtttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcataca 4893207  T
Q  105 acattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtac 204  Q
    |||||||||| |||||||| || |||||||| | |||  | || |||||||||||||| || || |||||||   | ||| ||| |||||| || || ||    
T  4893206 acattggtataggaggaaaagttggtctagcatattgctgctgctgctgttgaactggcggttgatgttgcacctgttgagcgatggcattgacagggac 4893107  T
Q  205 ctgaggttgacccg 218  Q
    ||||||||| ||||    
T  4893106 ctgaggttggcccg 4893093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 5596527 - 5596648
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  5596527 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacattggt 5596626  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || ||||| ||||| |||||||    
T  5596627 ataggagggaaggttggtctag 5596648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 7073300 - 7073157
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| | || ||||| || ||||| || || || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  7073300 gaaccttggaggcaacggatcaggcgggggcttaccttgtctagtcgtacaatgccctctttggagtaaagttggaagcaactcagcatataacatcggt 7073201  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    ||||||||||| |||||||||||||| |||  |||||| |||||    
T  7073200 atcggaggaaaagtaggtctagcttgctgattttgttgttgttg 7073157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 36997247 - 36997366
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || |  || |||||||||||||||    
T  36997247 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaagaagctctgcatacaacattggt 36997346  T
Q  113 atcggaggaaaggtaggtct 132  Q
    || |||||||| || |||||    
T  36997347 ataggaggaaaagttggtct 36997366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 133
Target Start/End: Complemental strand, 5467073 - 5466953
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| ||| || || | ||| ||||||||||| |||    
T  5467073 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttggaaggagttctgcatacaacataggt 5466974  T
Q  113 atcggaggaaaggtaggtcta 133  Q
    ||  ||||||| || ||||||    
T  5466973 ataagaggaaaagttggtcta 5466953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 5013800 - 5013657
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || | ||| || ||||||||||||    
T  5013800 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagttccgcgtacaacattggt 5013701  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| || || || ||||| |||  |||||| |||||    
T  5013700 ataggaggaaaagttggcctggcttgctgattttgttgttgttg 5013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 20066108 - 20066010
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtctag 134  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || |  || ||||||||||||||||| |||||||| || |||||||    
T  20066108 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagaagctctgcatacaacattggtataggaggaaaagttggtctag 20066010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 22871026 - 22871148
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| ||||| || || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  22871026 gaaccttggaggcaacggatcaggtgggggcttaccctgcctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 22871125  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || |||||||| || ||||||||    
T  22871126 ataggaggaaaagttggtctagc 22871148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 22886085 - 22886207
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| ||||| || || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  22886085 gaaccttggaggcaacggatcaggtgggggcttaccctgcctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 22886184  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || |||||||| || ||||||||    
T  22886185 ataggaggaaaagttggtctagc 22886207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 51782111 - 51782001
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||| |||  | || | ||| || ||||||||||||    
T  51782111 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtagagttagaagaagttctgcgtacaacattggt 51782012  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  51782011 ataggaggaaa 51782001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 24328247 - 24328104
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  24328247 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacatcggt 24328148  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| ||||| || || ||||| |||  |||||| |||||    
T  24328147 ataggagggaaggttggcctggcttgctgattttgttgttgttg 24328104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 8211826 - 8211716
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| ||||| || || || || ||||||||  | |||| ||| || || | ||| |||||||||||||||    
T  8211826 gaaccttggaggcaacggatcaggtgggggcttaccctgcctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacattggt 8211727  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  8211726 ataggaggaaa 8211716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 20577040 - 20577136
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  20577040 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 20577136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 29665163 - 29665259
Alignment:
Q  36 gtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggaggaaaggtaggtct 132  Q
    |||||||||||||||| || || |||||||| |||||  | |||||||| || || || || ||||| ||||| ||||| |||||||| || |||||    
T  29665163 gtggaggcttgccctgcctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatataacatcggtataggaggaaaagttggtct 29665259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 9354761 - 9354540
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||| |||    
T  9354761 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgaggagtagagtcgggagtaattcagca 9354662  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| |||||||||||||||||||| ||||||||||||||||    
T  9354661 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctggacgacggcattaacgg 9354562  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  9354561 gtacctgaggttgacccgatgg 9354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 44563240 - 44563019
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| || || |||    
T  44563240 gaggtccgaacggaacttgggaggcgatggatcaggtggaggcttgccctgtctggttgtgcagtgccctttgagaagtagagtcgggagcaactcagca 44563141  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | |||||||||| |||||||||||||||||||||||||  | ||| | |||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  44563140 tatagcattggtatcagaggaaaggtaggtctagcttgttgctgctgtcgttgttgagctggaggctgttgttgcattcgctgaacggcggcattaacgg 44563041  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||| ||||||||    
T  44563040 gtacctgaggttgtcccgatgg 44563019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 19659115 - 19659336
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| |||||||| | || ||| ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||    
T  19659115 gaggtccgaacggaacttgggaggcgacgggtcaggtggaggcttgccctgtctggttgtgcagcgccctttgagaagtagagtcgggagtaattcagca 19659214  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || |||||||||||| ||||||||||||||||||| |||||  | ||| | |||||| |||| || ||||||||||||||||| ||||||||||||||||    
T  19659215 tataacattggtatcagaggaaaggtaggtctagcctgttgctgctgtcgttgttgagctggaggttgttgttgcattcgctggacgacggcattaacgg 19659314  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  19659315 gtacctgaggttgacccgatgg 19659336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 22080954 - 22081168
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| || | | |||||||||| ||||| |||||||||||||||||| ||||||| ||||||||||| |  |||||     
T  22080954 gaggtcagaacggaacctgggaggcaacgggttaggtggaggctttccctgcctggttgtgcagtgccctttgagaagcaaagtcgggagcagctcggcg 22081053  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    |||| ||||||||||||||||||||||||||| | |||||   | || ||||||||| |    |||||||| |||||| ||||| | | |||||| ||||    
T  22081054 tacagcattggtatcggaggaaaggtaggtctggtttgtt---gctgctgctgttgagccaacggctgttgctgcatttgctgagcaatggcattgacgg 22081150  T
Q  201 gtacctgaggttgacccg 218  Q
    ||||||||||||||||||    
T  22081151 gtacctgaggttgacccg 22081168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 16283576 - 16283433
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || |||||||| || ||||||||||| || || || ||||||||||| |||    
T  16283576 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctaaggagtaaagtcggaagcaactcagcatacaacatcggt 16283477  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||    
T  16283476 atcggagggaaggtaggtctagcttgttgatgttgttgttgttg 16283433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33244804 - 33244664
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||| ||| ||||| | |||||| | || ||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||  ||    
T  33244804 gaggtccgaacggaacttaggaggcgacgggtcaggtggaggcttgccctgtctggttgtgcagcgccctttgagaagtagagtcgggagtaattcaaca 33244705  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttg 141  Q
    || |||||||||||| ||||||||||||||||||| |||||    
T  33244704 tataacattggtatcagaggaaaggtaggtctagcctgttg 33244664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 2137347 - 2137555
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  2137347 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 2137446  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  2137447 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 2137546  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  2137547 gttgacccg 2137555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 27608993 - 27609201
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  27608993 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 27609092  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  27609093 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 27609192  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  27609193 gttgacccg 27609201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 16277681 - 16277473
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  16277681 gaacctgggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacatcggt 16277582  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  16277581 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 16277482  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  16277481 gttgacccg 16277473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 14557751 - 14557546
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| | |  |||||||||||||||||||| || ||||||||  | |||||||| || || || || ||||| |||||||||    
T  14557751 gaaccttggaggcaacggatcaggcgagggcttgccctgtctggttgtacaatgccctctatggagtaaagttggaagcaactcagcatataacattggt 14557652  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgaggtt 212  Q
    |||||||| || |||||||||||||| |||  |||||| |||||||||||   |||||||| |||  | ||| |||  |||||||| ||||| |||||||    
T  14557651 atcggagggaaagtaggtctagcttgctgattttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacaggtacttgaggtt 14557552  T
Q  213 gacccg 218  Q
    ||||||    
T  14557551 gacccg 14557546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 19688225 - 19688082
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  19688225 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 19688126  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||| |||  |||||| |||||    
T  19688125 atcggagggaaagtaggtctagcttgctgattttgttgttgttg 19688082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 31354651 - 31354508
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||||| || ||||||||  | |||||||| || || || |||||||| ||||| |||    
T  31354651 gaaccttggaggcaaaggatcaggtggaggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcggcatataacatcggt 31354552  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  31354551 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 31354508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 19208448 - 19208591
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  19208448 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 19208547  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  19208548 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 19208591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 31489838 - 31489981
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  31489838 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 31489937  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  31489938 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 31489981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 3329595 - 3329716
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| || |||||||| |||||  | |||||||| || || || || |||||||||||||||    
T  3329595 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagtcgtgcagtgtcctctctggagtaaagttggaagcaactcagcatacaacattggt 3329694  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  3329695 ataggaggaaaagttggtctag 3329716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 19674568 - 19674425
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| || ||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  19674568 gaaccttggaggcaacggatcaggtgggggtttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 19674469  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  19674468 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 19674425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 28362043 - 28362186
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  28362043 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 28362142  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  28362143 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 28362186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 29829450 - 29829328
Alignment:
Q  12 ggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattgg 111  Q
    ||||||| |||||||| |||||| |||| ||||| ||||||||||| || || ||||||||  | |||||||| || || | ||| || |||||||||||    
T  29829450 ggaaccttggaggcaacggatcaggtgggggcttaccctgtctggtggtacaatgccctctctggagtaaagttggaagaagttctgcgtacaacattgg 29829351  T
Q  112 tatcggaggaaaggtaggtctag 134  Q
    ||| |||||||| || |||||||    
T  29829350 tataggaggaaaagttggtctag 29829328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 135
Target Start/End: Complemental strand, 18710713 - 18710591
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||  |||||| |||  ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || |||||||||||||||    
T  18710713 gaaccttggaggcagcggatcaggtgagggcttaccctgtctagttgtacaatgccctctttggagtaaagttggaagcaactcagcatacaacattggt 18710614  T
Q  113 atcggaggaaaggtaggtctagc 135  Q
    || |||||||| || ||||||||    
T  18710613 ataggaggaaaagttggtctagc 18710591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 134
Target Start/End: Original strand, 12092812 - 12092933
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| |||||||||||||||    
T  12092812 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgtcctctctggagtagagttggaagaagttccgcatacaacattggt 12092911  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  12092912 ataggaggaaaagttggtctag 12092933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 134
Target Start/End: Complemental strand, 19286589 - 19286468
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| || ||| |||| ||||||||||| || ||||| || ||||||||  | |||||||| || || |  || ||||||||||| |||    
T  19286589 gaaccttggaggcaacgggtcaggtgggggcttgccctgcctagttgtacaatgccctctttggagtaaagttggaagaagctctgcatacaacataggt 19286490  T
Q  113 atcggaggaaaggtaggtctag 134  Q
    || |||||||| || |||||||    
T  19286489 ataggaggaaaagttggtctag 19286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 33258850 - 33258707
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || || |||||  | |||| ||| || || | ||| ||||||||||| |||    
T  33258850 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgacctctctggagtagagttggaagaagttctgcatacaacatcggt 33258751  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || ||||| ||||| || || ||||| |||  |||||| |||||    
T  33258750 ataggagggaaggttggcctggcttgctgattttgttgttgttg 33258707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 2775 - 2996
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||||| ||||| || |||||| |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||  ||||||    
T  2775 gaggtcagaacggaacctaggaggtaacggatcaggtggaggcttgccctgtctggttgtgtagtgccctctgagaagtagagttgggagtagctcggca 2874  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||||||||| ||| | ||||| |||||| |||| ||||||||||||||| | |||||||||||||| ||||    
T  2875 tatagcattggtatcggaggaaaggtaggtctagcttgctgatgctgttgttgttgagctggaggctgttgttgcatttgttgaacgacggcattgacgg 2974  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  2975 gtacctgaggttgacccgatgg 2996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 117; Significance: 9e-60; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 20527 - 20327
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||    
T  20527 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccctctgagaagtagagtcgggagtaactcagca 20428  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    ||||||||||||||||| |||||||||||||||||||         ||||||            |||||||||||||| |||||||||||||||||||||    
T  20427 tacaacattggtatcgggggaaaggtaggtctagctt---------gttgct------------gctgttgttgcatttgctgaacgacggcattaacgg 20349  T
Q  201 gtacctgaggttgacccgatgg 222  Q
    ||||||||||||||||||||||    
T  20348 gtacctgaggttgacccgatgg 20327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 30579 - 30372
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || || |||||  | ||||| || || || | ||| |||||||||||||||    
T  30579 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgacctctctggagtaaggttggaagaagttctgcatacaacattggt 30480  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    || |||||||| |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  30479 ataggaggaaa-gtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 30381  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  30380 gttgacccg 30372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 145 - 312
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||||||| |||||| |||||| ||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  145 gaggtcagaacggaacctggaaggcaacggatcaggtggaggcttgccatgtctggttgagcagtgccctctgagaagtagagtcgggagtaactcggca 244  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctg 168  Q
    || | ||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||    
T  245 tatagcattggtatcggaggaaaggtaggtctagcttgttgctgctgttgctgttgagctggtggctg 312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 21700 - 21486
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggca 100  Q
    |||||||||| ||||||||||||||||  | | | |||||||||||||||| |||||||||||||| ||| ||||||| ||||||||||| |  ||||||    
T  21700 gaggtcagaacggaacctgggaggcaacaggttaggtggaggcttgccctgcctggttgtgcagtgtcctttgagaagcaaagtcgggagcagctcggca 21601  T
Q  101 tacaacattggtatcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgg 200  Q
    || | ||||||||||||||||||||||||||| | |||||   |||| ||||||| | |  |  |||||||||||||| ||||| | | |||||| ||||    
T  21600 tatagcattggtatcggaggaaaggtaggtctggtttgtt---gttgctgctgttaagccagcagctgttgttgcatttgctgagcaatggcattgacgg 21504  T
Q  201 gtacctgaggttgacccg 218  Q
    ||||||||||||||||||    
T  21503 gtacctgaggttgacccg 21486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 29890 - 29747
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  29890 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 29791  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || |||||||||||||||||| ||||||| |||||    
T  29790 atcggagggaaagtaggtctagcttgttgatgttgttgttgttg 29747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 47114 - 47322
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || || |||||  | ||||||||||| || || || ||||||||||| |||    
T  47114 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgtcctctatggagtaaagtcggaagcaactcagcatacaacatcggt 47213  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  47214 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 47313  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  47314 gttgacccg 47322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 40198 - 40406
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    ||||||||| ||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||||||||| |||    
T  40198 gaacctggggggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatacaacatcggt 40297  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  ||||| |||||||||||||    
T  40298 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcatttacgggtacctgag 40397  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  40398 gttgacccg 40406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 13 - 218
Target Start/End: Complemental strand, 27419 - 27211
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || || ||||| ||||| |||    
T  27419 gaaccttggaggcaacggatcaggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactcagcatataacatcggt 27320  T
Q  113 atcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctgag 209  Q
    |||||||| || |||||||||||||| |||    ||||||| |||||||||||   |||||||| |||  | ||| |||  |||||||||||||| ||||    
T  27319 atcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaactggcaactgttgtttcatctgttgagcgattgcattaacgggtacttgag 27220  T
Q  210 gttgacccg 218  Q
    |||||||||    
T  27219 gttgacccg 27211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2034 - 2103
Alignment:
Q  1 gaggtcagaatggaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccct 70  Q
    |||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  2034 gaggtcagaacggaacctgggaggcaacggatcaggtggaggcttgccctgtctggttgtgcagtgccct 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 15059 - 15202
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || |  || |||||||||||||||    
T  15059 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagaagatctgcatacaacattggt 15158  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    || |||||||| |||||||||||||| |||  |||||| |||||    
T  15159 ataggaggaaaagtaggtctagcttgctgattttgttgttgttg 15202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 9195 - 9338
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  9195 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 9294  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  9295 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 20142 - 19999
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  20142 gaaccttggaggcaacggatcaggtggtggcttgccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 20043  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  20042 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 19999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 258 - 467
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaa-ttcggcatacaacattgg 111  Q
    |||| |||||||||| |||||  |||| |||||||||||||||||||| || ||||||||  | ||||||||||| || || |   ||||| ||||| ||    
T  258 gaacttgggaggcaacggatccggtgggggcttgccctgtctggttgtacaatgccctctatggagtaaagtcggaagcaactaaagcatataacatcgg 357  T
Q  112 tatcggaggaaaggtaggtctagcttgttga---cgttgttgctgttgaactggtggctgttgttgcattcgctgaacgacggcattaacgggtacctga 208  Q
    ||||||||| || |||||||||||||| |||    ||||||| |||||||| ||   |||||||| |||  | ||| | |  |||||||||||||| |||    
T  358 tatcggagggaaagtaggtctagcttgctgattttgttgttgttgttgaaccggcaactgttgtttcatctgttgagcaattgcattaacgggtacttga 457  T
Q  209 ggttgacccg 218  Q
    ||||||||||    
T  458 ggttgacccg 467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 156
Target Start/End: Original strand, 7368 - 7511
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||||||| || || || || ||||| ||||| |||    
T  7368 gaaccttggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtaaagttggaagcaactcagcatataacatcggt 7467  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||||||| || ||||| |||||||| |||  |||||| |||||    
T  7468 atcggagggaaagtaggcctagcttgctgattttgttgttgttg 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 164
Target Start/End: Complemental strand, 9693 - 9542
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||||||||| || || || ||||||||  | |||| ||| || || | ||| ||||||||||| |||    
T  9693 gaaccttggaggcaacggatcaggtgggggcttgccctgtctagtcgtacaatgccctctctggagtagagttggaagaagttctgcatacaacataggt 9594  T
Q  113 atcggaggaaaggtaggtctagcttgttgacgttgttgctgttgaactggtg 164  Q
    || |||||||| || |||||||| | |||  | || ||||||||||||||||    
T  9593 ataggaggaaaagttggtctagcatattgctgctgctgctgttgaactggtg 9542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 26338 - 26474
Alignment:
Q  20 ggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggtatcggag 119  Q
    |||||||| |||||| |||| ||||| |||||||| ||||| || ||||||||  | |||| ||| || || |  || ||||||||||||||||| ||||    
T  26338 ggaggcaacggatcaggtgggggcttaccctgtctagttgtacaatgccctctctggagtagagttggaagaagctctgcatacaacattggtataggag 26437  T
Q  120 gaaaggtaggtctagcttgttgacgttgttgctgttg 156  Q
    |||| ||||| |||||||| |||  |||||| |||||    
T  26438 gaaaagtaggcctagcttgctgattttgttgttgttg 26474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 8076 - 7966
Alignment:
Q  13 gaacctgggaggcaatggatcaagtggaggcttgccctgtctggttgtgcagtgccctctgagaagtaaagtcgggagtaattcggcatacaacattggt 112  Q
    |||||| |||||||| |||||| |||| |||||||| ||||| || || || ||||||||  | |||| ||| || || || || |||||||||||||||    
T  8076 gaaccttggaggcaacggatcaggtggtggcttgccttgtctagtcgtacaatgccctctctggagtagagttggaagcaactcagcatacaacattggt 7977  T
Q  113 atcggaggaaa 123  Q
    || ||||||||    
T  7976 ataggaggaaa 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University