View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12451_low_20 (Length: 220)

Name: NF12451_low_20
Description: NF12451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12451_low_20
NF12451_low_20
[»] chr2 (9 HSPs)
chr2 (3-202)||(6466123-6466318)
chr2 (42-106)||(29651783-29651847)
chr2 (31-178)||(3395391-3395538)
chr2 (43-106)||(36727644-36727707)
chr2 (42-196)||(36720078-36720232)
chr2 (42-178)||(5788812-5788946)
chr2 (37-106)||(36729286-36729355)
chr2 (39-106)||(25546947-25547014)
chr2 (31-91)||(19040698-19040758)
[»] chr8 (8 HSPs)
chr8 (12-204)||(18953264-18953459)
chr8 (42-197)||(38290546-38290701)
chr8 (31-108)||(13756537-13756614)
chr8 (30-99)||(21587047-21587116)
chr8 (37-99)||(23394803-23394863)
chr8 (51-106)||(40885776-40885831)
chr8 (31-106)||(42797296-42797371)
chr8 (42-106)||(30254533-30254597)
[»] chr3 (5 HSPs)
chr3 (23-196)||(431961-432134)
chr3 (31-106)||(50331969-50332044)
chr3 (42-108)||(14044292-14044358)
chr3 (31-174)||(20934940-20935082)
chr3 (30-99)||(36097924-36097993)
[»] chr7 (5 HSPs)
chr7 (23-196)||(42080787-42080959)
chr7 (31-196)||(45406698-45406861)
chr7 (31-128)||(43989683-43989779)
chr7 (58-106)||(22528933-22528981)
chr7 (31-91)||(38788967-38789027)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-196)||(31011-31194)
[»] chr4 (8 HSPs)
chr4 (3-196)||(42757502-42757696)
chr4 (42-106)||(11559521-11559585)
chr4 (31-178)||(13228693-13228839)
chr4 (30-99)||(39976659-39976728)
chr4 (37-97)||(42727943-42728003)
chr4 (31-96)||(24183445-24183510)
chr4 (31-91)||(28475659-28475719)
chr4 (31-99)||(50158189-50158257)
[»] scaffold1315 (1 HSPs)
scaffold1315 (15-196)||(495-677)
[»] scaffold1293 (1 HSPs)
scaffold1293 (15-196)||(1394-1576)
[»] chr6 (5 HSPs)
chr6 (44-106)||(31737226-31737288)
chr6 (31-106)||(1599683-1599758)
chr6 (42-99)||(24360161-24360218)
chr6 (31-91)||(7428510-7428570)
chr6 (42-106)||(16707319-16707383)
[»] chr5 (2 HSPs)
chr5 (37-178)||(38015871-38016012)
chr5 (30-99)||(33012124-33012193)
[»] chr1 (9 HSPs)
chr1 (31-178)||(43387038-43387185)
chr1 (37-178)||(16853617-16853756)
chr1 (40-100)||(3981635-3981695)
chr1 (31-99)||(22636336-22636404)
chr1 (42-90)||(31090337-31090385)
chr1 (42-106)||(47783158-47783222)
chr1 (31-128)||(20306722-20306818)
chr1 (31-91)||(1992423-1992483)
chr1 (31-91)||(40946520-40946580)
[»] scaffold0159 (1 HSPs)
scaffold0159 (42-178)||(33185-33319)
[»] scaffold1345 (1 HSPs)
scaffold1345 (31-117)||(1849-1934)


Alignment Details
Target: chr2 (Bit Score: 151; Significance: 5e-80; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 6466123 - 6466318
Alignment:
Q  3 gtggaggagcacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaa 102  Q
    |||| ||| |||||||||||||||||| ||||| |||||||||||| ||||    |||||||||||||||||||||||||||||||||||||||||||||    
T  6466123 gtggtggatcacagacacagagagtctcttaatggagaaatgttaacgtgt----tgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaa 6466218  T
Q  103 acatttgagagagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaatgatgat 202  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  6466219 acatttgagagagattattcatatacccaatgctttaggattttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttgactaatgatgat 6466318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 29651783 - 29651847
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    ||||||||||||||| ||||| ||||| ||| |||||| ||||||||||| |||||||| |||||    
T  29651783 atgttaatgtgtcaaatgtgagttaaagtttcacattgaatgcaagagtagatgttgaacaacat 29651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 3395538 - 3395391
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 130  Q
    ||||| |||| ||||||||||||||  ||||| |||||||   || ||| |||||| |||| ||||||| |||||| | || ||||| | ||||||| |     
T  3395538 ttaatggagagatgttaatgtgtcaggtgtgagttaaaataacactttgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatct 3395439  T
Q  131 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    | ||  ||| ||||||||||||||  |||| |||||||| ||||||||    
T  3395438 aatgtcttaagattttgggtgaagttgtgatgtcaatcttacttgtgt 3395391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 36727707 - 36727644
Alignment:
Q  43 tgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||| |||| ||||| | ||||||    
T  36727707 tgttaatgtgtcaattgtgacttaaaatttcacattagatgcaaaagtagatgttaagaaacat 36727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 36720078 - 36720232
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 141  Q
    ||||||||||||||| ||||| ||||||||  ||| ||  ||||| | || |||||||  ||||| | || ||||| || |||||||| | ||  | | |    
T  36720078 atgttaatgtgtcaagtgtgagttaaaattctacaatgtgtgcaataatatatgttgagcaacatataagtgagatgatccatatacctaatgtctgaag 36720177  T
Q  142 attttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    | |||||||||||| |||| |||||||| | |||||| ||||||||| |||||||    
T  36720178 actttgggtgaagatgtgatgtcaatctaatttgtgtagttgctcttagactaat 36720232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 5788946 - 5788812
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 141  Q
    ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||| ||||| | || ||||| | ||||||  | | ||  ||| |    
T  5788946 atgttaatgtgtcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 5788849  T
Q  142 attttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    |||||||||||||  |||| |||||||| ||||||||    
T  5788848 attttgggtgaagttgtgatgtcaatcttacttgtgt 5788812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 36729355 - 36729286
Alignment:
Q  37 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||| |||||||| |||||| ||||| | ||||||| |||||| ||||||||||| |||||||| |||||    
T  36729355 gagatatgttaatttgtcaagtgtgagtaaaaatttcacattgtatgcaagagtagatgttgaacaacat 36729286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 25546947 - 25547014
Alignment:
Q  39 gaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||| ||||||||||| ||||| ||||| ||  |||||||||||||||  | ||||||||||||||    
T  25546947 gaaatggtaatgtgtcaaatgtgagttaaagttctacattggatgcaagaacatatgttgaaaaacat 25547014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19040698 - 19040758
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  19040698 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 19040758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 18953459 - 18953264
Alignment:
Q  12 cacagacacagagagtctattaatagagaaa---tgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 108  Q
    ||||||||| |||| ||||||||| ||||||   |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18953459 cacagacacggagattctattaatggagaaaggttgttaatgtgtcaactgtgaattaaaatttgacattggatgcaagagtagatgttgaaaaacattt 18953360  T
Q  109 gagagagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaatgatgatac 204  Q
    ||| ||||||||||| | ||  | |||||||||| |||||||||||||||||  || ||||||||||| ||||||||||||||| |||||||||||    
T  18953359 gagggagattattcaaaaacttaatgctttaggactttgggtgaagaagtgatatcgatctcacttgtattgttgctctttgaccaatgatgatac 18953264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 38290546 - 38290701
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 141  Q
    ||||||||||||||| ||||| ||| ||||| |||||  ||||||||| ||||||| |||||||| | || | | | | | ||||||| | ||| ||| |    
T  38290546 atgttaatgtgtcaagtgtgagttataattttacattacatgcaagagaaaatgtttaaaaacatataagtgggttgactgatatacctaatgccttaag 38290645  T
Q  142 attttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaatg 197  Q
    | ||| ||||||||||| | |||||  ||| || ||||||||||||| | ||||||    
T  38290646 acttttggtgaagaagttatgtcaacttcatttatgttgttgctcttagcctaatg 38290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 13756537 - 13756614
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 108  Q
    |||||| ||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||||    
T  13756537 ttaatatagatatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacattt 13756614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 21587116 - 21587047
Alignment:
Q  30 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| |||||||||||| |||||||    
T  21587116 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaagagtagatgttga 21587047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 23394863 - 23394803
Alignment:
Q  37 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    |||||||||| |||||||||  |||| ||||||||| |||||||||||||||| |||| ||||    
T  23394863 gagaaatgttgatgtgtcaa--gtgagttaaaatttcacattggatgcaagagcaaatattga 23394803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 40885776 - 40885831
Alignment:
Q  51 tgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||| ||||| ||||||||| ||||||||||||| | ||||||||||| |||||    
T  40885776 tgtcaagtgtgatttaaaatttcacattggatgcaataataaatgttgaacaacat 40885831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 42797371 - 42797296
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||| | ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  42797371 ttaatagaaagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtatatgttgagaaacat 42797296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 30254533 - 30254597
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    ||||||||||||||| ||||| |||||||| |||| | |||||||  ||| |||||||| |||||    
T  30254533 atgttaatgtgtcaaatgtgagttaaaattcgacaatagatgcaaacgtatatgttgaacaacat 30254597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 8e-51; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 431961 - 432134
Alignment:
Q  23 agagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattc 122  Q
    ||||||| ||||| |||| || |||||||||||||||||| |||||||| ||||||||||||||||||| ||||||| |||||| ||||  ||||||| |    
T  431961 agagtctcttaatggagagatattaatgtgtcaattgtgagttaaaattcgacattggatgcaagagtatatgttgagaaacatatgaggaagattatcc 432060  T
Q  123 atatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    ||||| | | |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  432061 atataactaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttgactaat 432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 50332044 - 50331969
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  50332044 ttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacat 50331969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 14044292 - 14044358
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacattt 108  Q
    ||||||||||||||| ||||| ||||| ||  | ||||||||||| ||||||||||||| |||||||    
T  14044292 atgttaatgtgtcaagtgtgatttaaagttccatattggatgcaatagtaaatgttgaacaacattt 14044358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 20935082 - 20934940
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 130  Q
    ||||| |||| ||||||||||||||  ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || ||||| | ||||||||      
T  20935082 ttaatggagagatgttaatgtgtcaggtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgactcatatacat 20934984  T
Q  131 attgctttaggattttgggtgaagaagtgacgtcaatctcactt 174  Q
    | |||||| ||| ||||   ||||| |||| || ||||||||||    
T  20934983 aatgctttcggactttgaaagaagatgtgatgtgaatctcactt 20934940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 36097924 - 36097993
Alignment:
Q  30 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| ||||||| |||| |||||||    
T  36097924 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaaaagtagatgttga 36097993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 42080959 - 42080787
Alignment:
Q  23 agagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattc 122  Q
    ||||||| ||||| |||| || ||||||||||| | |||| ||||||||||||||| |||||||||||| ||||||| |||||| |||| |||||||| |    
T  42080959 agagtctcttaatggagagatattaatgtgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag-gagattatcc 42080861  T
Q  123 atatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    ||||||| | |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  42080860 atatacctaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttaactaat 42080787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 45406698 - 45406861
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 130  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||||| | ||||||| |||||| |||| |||||||| ||||||||     
T  45406698 ttaatggagaaatgttaatgtgtcaattgtgagttaaaatttgacatttgatgtaagaggagatgttgagaaacatatgagggagattatccatatacct 45406797  T
Q  131 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    | |||||||||| ||||| ||||||||||| ||| |||||||   |||||||||||||||||||||    
T  45406798 aatgctttaggactttggttgaagaagtgatgtcgatctcac--atgttgttgctctttgactaat 45406861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 43989683 - 43989779
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatac 128  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || ||||| ||||||||||    
T  43989683 ttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagatgattcatatac 43989779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 22528933 - 22528981
Alignment:
Q  58 tgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||||||    
T  22528933 tgtgagttaaaattttacattgtatgcaagagtaaatgttgagaaacat 22528981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 38789027 - 38788967
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| |||||||||||    
T  38789027 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagta 38788967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 31011 - 31194
Alignment:
Q  12 cacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgag 111  Q
    |||||||||  ||||||| ||||| |||| || ||||| ||||| | |||| ||||||||||||||| |||||||||||| ||||||| |||||| ||||    
T  31011 cacagacacgaagagtctcttaatggagagatattaatttgtcagtcgtgagttaaaatttgacattagatgcaagagtagatgttgagaaacatatgag 31110  T
Q  112 agagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
     |||||||| |||||||| | |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  31111 -gagattatccatatacctaatgctttaggactttgggtgaagaagtgatgtcgatctcacttgtgttgttgctctttaactaat 31194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 5e-43; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 42757696 - 42757502
Alignment:
Q  3 gtggaggagcacagacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattgg--atgcaagagtaaatgttgaa 100  Q
    |||| ||| ||||||||| |||||||| |||||||||| ||||||||||||||||||||| | ||| ||| |||||||  ||||||||||| ||||||||    
T  42757696 gtggtggatcacagacacggagagtctcttaatagagagatgttaatgtgtcaattgtgagtaaaagtttaacattggatatgcaagagtagatgttgaa 42757597  T
Q  101 aaacatttgagagagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    |||||| |||| ||||||| ||||||||| | ||  |||||| |||||||||| | |||| ||| |||||||||||||||||||| ||||||||||    
T  42757596 aaacatatgagggagatta-tcatatacctaatgtcttaggactttgggtgaaaaggtgatgtcgatctcacttgtgttgttgctatttgactaat 42757502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 11559521 - 11559585
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||| ||| || ||||| ||||||||||| |||| |||||||||||||||||||| |||||    
T  11559521 atgttaatatgtaaagtgtgacttaaaatttgatattgtatgcaagagtaaatgttgaacaacat 11559585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 178
Target Start/End: Original strand, 13228693 - 13228839
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 130  Q
    ||||| |||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| |||||| | || ||||| | ||||||| |     
T  13228693 ttaatggagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacatataagtgagatgactcatatatct 13228792  T
Q  131 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    | | | |||  |||||||||||||  |||| |||||||| ||||||||    
T  13228793 aattc-ttaaaattttgggtgaagttgtgatgtcaatcttacttgtgt 13228839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 99
Target Start/End: Original strand, 39976659 - 39976728
Alignment:
Q  30 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||| ||||| |||||||||||| |||||||    
T  39976659 attaagagagatatgttattgtgtcaattgtaatttaaattttcacattagatgcaagagtagatgttga 39976728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 42728003 - 42727943
Alignment:
Q  37 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgtt 97  Q
    |||| ||||||||||||||||||| | ||||| ||| ||||| |||||||||||| |||||    
T  42728003 gagatatgttaatgtgtcaattgttacttaaagttttacatttgatgcaagagtagatgtt 42727943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 24183510 - 24183445
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgt 96  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| ||||||||||| ||||    
T  24183510 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatgt 24183445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 28475719 - 28475659
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| |||||||||||| || ||| | ||||||||| |||||| |||||||||||    
T  28475719 ttaatggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagta 28475659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 99
Target Start/End: Original strand, 50158189 - 50158257
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| |||| ||||||||||||||| | ||| ||||| ||| |||||  ||||||||||| |||||||    
T  50158189 ttaatggagagatgttaatgtgtcaagtatgagttaaagtttcacattttatgcaagagtatatgttga 50158257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1315 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1315
Description:

Target: scaffold1315; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 495 - 677
Alignment:
Q  15 agacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggat--gcaagagtaaatgttgaaaaacatttgaga 112  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||| | | ||| ||  |||||||||  ||||||||| ||||||| |||||| ||||     
T  495 agacacggagagtctcttaatagagagatgttaatgtgtcagttgtaagtaaaagttcaacattggatatgcaagagtagatgttgagaaacatatgagg 594  T
Q  113 gagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    |||||||| |||||||| | ||  |||||| |||||||||| |||||| ||| |||||||||||| ||||||| ||||||||||    
T  595 gagattat-catatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctcacttgtgctgttgctatttgactaat 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1293 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1293
Description:

Target: scaffold1293; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 1576 - 1394
Alignment:
Q  15 agacacagagagtctattaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggat--gcaagagtaaatgttgaaaaacatttgaga 112  Q
    |||||| |||||||| |||||||||| |||||||||||||| |||| | | ||| ||  |||||||||  ||||||||| ||||||| |||||| ||||     
T  1576 agacacggagagtctcttaatagagagatgttaatgtgtcagttgtaagtaaaagttcaacattggatatgcaagagtagatgttgagaaacatatgagg 1477  T
Q  113 gagattattcatatacccattgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgttgttgctctttgactaat 196  Q
    |||||||| |||||||| | ||  |||||| |||||||||| |||||| ||| |||||||||||| ||||||| ||||||||||    
T  1476 gagattat-catatacctaatgtcttaggactttgggtgaaaaagtgatgtcgatctcacttgtgctgttgctatttgactaat 1394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 31737288 - 31737226
Alignment:
Q  44 gttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||| |||||    
T  31737288 gttaatgtgtcaattgtgagttaaaatttcacattggatgcaagagtagatgttgaacaacat 31737226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 1599683 - 1599758
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| ||||||| ||||||    
T  1599683 ttaatagagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagaaacat 1599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 24360218 - 24360161
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||||||||||||||| ||| ||||| ||  ||| |||||||||||||| |||||||    
T  24360218 atgttaatgtgtcaattttgacttaaagttccacaatggatgcaagagtagatgttga 24360161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 7428570 - 7428510
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  7428570 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 7428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 16707319 - 16707383
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    |||||||||||||||  |||| || || ||| |||||||| | ||||||||||||||| ||||||    
T  16707319 atgttaatgtgtcaaacgtgagttgaagtttcacattggaagtaagagtaaatgttgataaacat 16707383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 38016012 - 38015871
Alignment:
Q  37 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgct 136  Q
    |||| ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||  ||||| | || ||||| | ||||||| | | ||      
T  38016012 gagagatgttaatgtgtcaagtgtgagttaaaataacacattgaatgcaatagtagatgttgagcaacatataagtgagatgactcatatatctaatgac 38015913  T
Q  137 ttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    ||| ||||||||||||||  |||| |||||||||||||||||    
T  38015912 ttaagattttgggtgaagttgtgatgtcaatctcacttgtgt 38015871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 99
Target Start/End: Complemental strand, 33012193 - 33012124
Alignment:
Q  30 attaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| ||||| |||||| |||||||||||| | ||||| ||  ||||| |||||||||||| |||||||    
T  33012193 attaagagagatatgttattgtgtcaattgtaatttaaagttccacattagatgcaagagtagatgttga 33012124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 43387185 - 43387038
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatataccc 130  Q
    |||| ||||| ||||||||||||||| ||||| ||||||||  |||||| |||||| |||| ||||||| |||||| | || || || | || |||| |     
T  43387185 ttaacagagagatgttaatgtgtcaagtgtgagttaaaattacacattgaatgcaatagtagatgttgagaaacatataagtgaaatgactcgtatatct 43387086  T
Q  131 attgctttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    | ||  ||| ||||||||||||||  |||| |||||||| ||||||||    
T  43387085 aatgtcttaagattttgggtgaagttgtgatgtcaatcttacttgtgt 43387038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 16853617 - 16853756
Alignment:
Q  37 gagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgct 136  Q
    |||| ||||||| ||||||||||||| | ||| ||| | ||||||||||  ||||||| ||||||||||| | || ||||| ||  ||||||  | ||||    
T  16853617 gagagatgttaaagtgtcaattgtgactcaaagtttcaaattggatgca--agtaaatcttgaaaaacatataagtgagatgatcaatatacataatgct 16853714  T
Q  137 ttaggattttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    ||| | |||||||||| || |||  |||||||||| ||||||    
T  16853715 ttaaggttttgggtgatgatgtggtgtcaatctcagttgtgt 16853756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 3981635 - 3981695
Alignment:
Q  40 aaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaa 100  Q
    |||||||||||||| || ||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  3981635 aaatgttaatgtgtaaagtgtaaattaaagttttacattgaatgcaagagtagatgttgaa 3981695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 99
Target Start/End: Complemental strand, 22636404 - 22636336
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttga 99  Q
    ||||| |||| |||||||| | |||| ||||| |||||||||||| ||| ||||||||||| |||||||    
T  22636404 ttaatggagagatgttaatttttcaagtgtgagttaaaatttgactttgaatgcaagagtagatgttga 22636336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 31090385 - 31090337
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagt 90  Q
    ||||||||||||||||| ||||||||||||| ||| || ||||||||||    
T  31090385 atgttaatgtgtcaattatgaattaaaattttacaatgtatgcaagagt 31090337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 106
Target Start/End: Original strand, 47783158 - 47783222
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacat 106  Q
    ||||||||||||||| ||||| ||||| ||| ||||||| ||||||||||| |||| || |||||    
T  47783158 atgttaatgtgtcaagtgtgagttaaagtttcacattggctgcaagagtaattgtttaacaacat 47783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 20306818 - 20306722
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatac 128  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||  ||| |||||||| || ||||| | ||||||||    
T  20306818 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagat-atgagaaacatttaagtgagatgactcatatac 20306722  T

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Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 1992423 - 1992483
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  1992423 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 1992483  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 40946520 - 40946580
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagta 91  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| ||||    
T  40946520 ttaatggagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagta 40946580  T

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Target: scaffold0159 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 33319 - 33185
Alignment:
Q  42 atgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagattattcatatacccattgctttagg 141  Q
    ||||||||||||||| ||||| |||||||   |||||| |||||| |||| |||||||| ||||| | || ||||| | ||||||  | | ||  ||| |    
T  33319 atgttaatgtgtcaaatgtgagttaaaataacacattgaatgcaatagtagatgttgaacaacatataagtgagatgactcatat--ctaatgtcttaag 33222  T
Q  142 attttgggtgaagaagtgacgtcaatctcacttgtgt 178  Q
    |||||||||||||  |||| |||||||| ||||||||    
T  33221 attttgggtgaagttgtgatgtcaatcttacttgtgt 33185  T

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Target: scaffold1345 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1345
Description:

Target: scaffold1345; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 1849 - 1934
Alignment:
Q  31 ttaatagagaaatgttaatgtgtcaattgtgaattaaaatttgacattggatgcaagagtaaatgttgaaaaacatttgagagagat 117  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||| | |||| |||||| |||| ||| ||| |||||||| || |||||    
T  1849 ttaattgagagatgttaatgtgtcaagtgtgagttaaaattttatattgtatgcaatagtagatg-tgagaaacatttaagtgagat 1934  T

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