View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12452_high_3 (Length: 253)

Name: NF12452_high_3
Description: NF12452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12452_high_3
NF12452_high_3
[»] chr8 (53 HSPs)
chr8 (14-204)||(25192215-25192405)
chr8 (149-204)||(25566842-25566897)
chr8 (149-204)||(15816132-15816187)
chr8 (149-198)||(4948659-4948708)
chr8 (149-198)||(14134706-14134755)
chr8 (149-204)||(2572059-2572114)
chr8 (149-200)||(8342977-8343028)
chr8 (161-204)||(22595995-22596038)
chr8 (149-204)||(22651977-22652032)
chr8 (149-204)||(29510307-29510362)
chr8 (149-228)||(40332168-40332247)
chr8 (159-204)||(4611535-4611580)
chr8 (149-198)||(7658470-7658519)
chr8 (147-204)||(18407720-18407777)
chr8 (149-198)||(20679398-20679447)
chr8 (159-204)||(34897086-34897131)
chr8 (152-197)||(44067524-44067569)
chr8 (159-199)||(3025557-3025597)
chr8 (149-197)||(11927089-11927137)
chr8 (149-193)||(18170485-18170529)
chr8 (149-193)||(18634053-18634097)
chr8 (149-197)||(18646180-18646228)
chr8 (149-197)||(20873077-20873125)
chr8 (161-205)||(22197757-22197801)
chr8 (161-201)||(30077402-30077442)
chr8 (164-204)||(41831958-41831998)
chr8 (149-204)||(4298889-4298944)
chr8 (161-200)||(8343321-8343360)
chr8 (159-198)||(13203648-13203687)
chr8 (149-204)||(13436967-13437022)
chr8 (149-204)||(13844599-13844654)
chr8 (161-228)||(21465389-21465456)
chr8 (149-204)||(24613522-24613576)
chr8 (161-204)||(30271306-30271349)
chr8 (149-204)||(31236580-31236635)
chr8 (161-204)||(36450769-36450812)
chr8 (149-195)||(22493504-22493550)
chr8 (159-197)||(34201059-34201097)
chr8 (152-197)||(8017494-8017539)
chr8 (159-204)||(14731713-14731758)
chr8 (159-204)||(24362215-24362260)
chr8 (149-206)||(33382022-33382079)
chr8 (172-205)||(35519833-35519866)
chr8 (159-204)||(39954292-39954337)
chr8 (167-204)||(41838144-41838181)
chr8 (149-197)||(4786341-4786389)
chr8 (165-197)||(6211456-6211488)
chr8 (161-205)||(7442845-7442889)
chr8 (149-197)||(11944673-11944721)
chr8 (163-199)||(12559123-12559159)
chr8 (149-197)||(12985400-12985448)
chr8 (149-197)||(24669441-24669489)
chr8 (152-204)||(28745499-28745551)
[»] scaffold0027 (1 HSPs)
scaffold0027 (119-204)||(46683-46776)
[»] chr4 (53 HSPs)
chr4 (149-204)||(21945504-21945559)
chr4 (149-204)||(8423721-8423776)
chr4 (149-204)||(54580026-54580081)
chr4 (149-205)||(29205444-29205500)
chr4 (149-204)||(30298947-30299003)
chr4 (149-204)||(30327815-30327871)
chr4 (149-204)||(2361978-2362033)
chr4 (149-204)||(23292989-23293044)
chr4 (161-205)||(11596367-11596411)
chr4 (149-204)||(49431026-49431082)
chr4 (161-204)||(3947781-3947824)
chr4 (161-200)||(28964263-28964302)
chr4 (161-204)||(37203265-37203308)
chr4 (161-204)||(51701259-51701302)
chr4 (149-202)||(12895119-12895172)
chr4 (159-204)||(15029766-15029811)
chr4 (160-197)||(32910559-32910596)
chr4 (149-198)||(35157988-35158037)
chr4 (149-197)||(6485614-6485662)
chr4 (149-197)||(12895277-12895325)
chr4 (161-205)||(14465090-14465134)
chr4 (152-204)||(38148731-38148783)
chr4 (152-200)||(47263991-47264039)
chr4 (158-205)||(32273538-32273585)
chr4 (159-198)||(36635331-36635370)
chr4 (161-204)||(38847027-38847070)
chr4 (159-197)||(903930-903968)
chr4 (163-197)||(20743295-20743329)
chr4 (159-197)||(22440613-22440651)
chr4 (159-197)||(24343515-24343553)
chr4 (149-199)||(30982881-30982931)
chr4 (163-197)||(31243565-31243599)
chr4 (159-197)||(40179649-40179687)
chr4 (163-197)||(50848320-50848354)
chr4 (153-198)||(4383375-4383419)
chr4 (167-204)||(11651155-11651192)
chr4 (149-198)||(12797341-12797389)
chr4 (160-205)||(16189709-16189754)
chr4 (159-204)||(40613451-40613496)
chr4 (117-149)||(715543-715575)
chr4 (161-204)||(715622-715666)
chr4 (117-149)||(752869-752901)
chr4 (161-204)||(752948-752992)
chr4 (149-197)||(5775361-5775409)
chr4 (153-197)||(14126118-14126162)
chr4 (149-197)||(16303269-16303317)
chr4 (149-226)||(19312310-19312391)
chr4 (160-204)||(24999045-24999089)
chr4 (159-199)||(28158014-28158054)
chr4 (118-150)||(28470453-28470485)
chr4 (161-197)||(36386226-36386262)
chr4 (149-204)||(42640527-42640585)
chr4 (160-204)||(56257934-56257978)
[»] chr1 (72 HSPs)
chr1 (149-204)||(1486712-1486767)
chr1 (161-204)||(113300-113343)
chr1 (149-204)||(21378579-21378634)
chr1 (149-204)||(22515890-22515945)
chr1 (149-204)||(24577189-24577244)
chr1 (149-204)||(38078664-38078719)
chr1 (151-205)||(48450592-48450646)
chr1 (159-204)||(398778-398823)
chr1 (149-203)||(5944283-5944339)
chr1 (149-202)||(6612174-6612227)
chr1 (151-204)||(31015044-31015097)
chr1 (152-204)||(18190114-18190166)
chr1 (149-197)||(40258936-40258984)
chr1 (149-204)||(1704995-1705050)
chr1 (149-204)||(1864883-1864938)
chr1 (149-200)||(16927188-16927239)
chr1 (149-196)||(18337338-18337385)
chr1 (149-204)||(19058859-19058914)
chr1 (149-204)||(22881619-22881674)
chr1 (161-204)||(23738679-23738722)
chr1 (161-204)||(31672910-31672953)
chr1 (149-204)||(36878462-36878517)
chr1 (149-204)||(37598833-37598887)
chr1 (149-204)||(42359452-42359507)
chr1 (149-204)||(46348386-46348441)
chr1 (162-204)||(12443476-12443518)
chr1 (159-197)||(22794091-22794129)
chr1 (159-204)||(5898279-5898324)
chr1 (159-204)||(17754312-17754357)
chr1 (154-199)||(23531786-23531831)
chr1 (163-204)||(30847737-30847778)
chr1 (159-204)||(40181872-40181917)
chr1 (152-200)||(8010293-8010341)
chr1 (149-197)||(47989505-47989553)
chr1 (149-204)||(51410025-51410081)
chr1 (149-204)||(2896124-2896179)
chr1 (149-204)||(5376503-5376558)
chr1 (159-198)||(7918224-7918263)
chr1 (149-204)||(9629903-9629958)
chr1 (149-204)||(25272483-25272538)
chr1 (149-204)||(28273091-28273146)
chr1 (159-198)||(34298443-34298482)
chr1 (149-204)||(41877473-41877528)
chr1 (159-205)||(6427350-6427396)
chr1 (149-199)||(7353496-7353546)
chr1 (165-203)||(21366039-21366077)
chr1 (159-197)||(40747786-40747824)
chr1 (149-195)||(44482240-44482286)
chr1 (149-198)||(9828051-9828100)
chr1 (153-202)||(15323166-15323215)
chr1 (149-204)||(17778550-17778602)
chr1 (150-204)||(18471299-18471355)
chr1 (159-204)||(19324563-19324608)
chr1 (159-204)||(25098568-25098613)
chr1 (160-205)||(25452162-25452207)
chr1 (163-204)||(26238129-26238170)
chr1 (158-202)||(34741829-34741874)
chr1 (112-149)||(35702535-35702572)
chr1 (164-197)||(42325568-42325601)
chr1 (150-191)||(46914043-46914084)
chr1 (149-197)||(1815265-1815313)
chr1 (119-147)||(5898206-5898234)
chr1 (161-204)||(13011230-13011274)
chr1 (149-197)||(13997891-13997939)
chr1 (164-204)||(23621972-23622012)
chr1 (164-200)||(23653004-23653040)
chr1 (149-204)||(24462679-24462735)
chr1 (159-195)||(25361896-25361932)
chr1 (149-197)||(28674808-28674856)
chr1 (159-199)||(34712396-34712436)
chr1 (149-197)||(41017407-41017455)
chr1 (149-204)||(48148040-48148096)
[»] chr2 (53 HSPs)
chr2 (149-198)||(12668426-12668475)
chr2 (149-204)||(30335418-30335473)
chr2 (119-204)||(21374673-21374757)
chr2 (149-204)||(2438722-2438777)
chr2 (149-204)||(11223866-11223921)
chr2 (149-204)||(36756347-36756402)
chr2 (149-198)||(15657871-15657920)
chr2 (159-204)||(28677910-28677955)
chr2 (152-204)||(12940941-12940993)
chr2 (152-200)||(30717536-30717584)
chr2 (149-204)||(18841016-18841071)
chr2 (149-204)||(20539677-20539732)
chr2 (149-204)||(37558978-37559033)
chr2 (149-204)||(42832279-42832334)
chr2 (151-197)||(30404855-30404901)
chr2 (152-197)||(10535765-10535810)
chr2 (159-204)||(21616763-21616808)
chr2 (156-197)||(23921261-23921302)
chr2 (163-195)||(11308021-11308053)
chr2 (149-197)||(15972881-15972929)
chr2 (149-205)||(18420437-18420493)
chr2 (149-204)||(19536400-19536456)
chr2 (160-204)||(21782832-21782876)
chr2 (149-204)||(974748-974803)
chr2 (152-199)||(4882702-4882749)
chr2 (149-204)||(23718027-23718082)
chr2 (149-204)||(24105699-24105754)
chr2 (161-204)||(24894390-24894433)
chr2 (162-204)||(27460027-27460070)
chr2 (149-204)||(29176496-29176551)
chr2 (161-204)||(38117174-38117217)
chr2 (161-204)||(39323265-39323308)
chr2 (149-204)||(44860321-44860376)
chr2 (150-204)||(6940256-6940310)
chr2 (149-199)||(34691808-34691858)
chr2 (149-199)||(34714220-34714270)
chr2 (159-197)||(40361767-40361805)
chr2 (149-198)||(5367199-5367248)
chr2 (149-186)||(28341872-28341909)
chr2 (160-197)||(28412358-28412395)
chr2 (159-204)||(31808078-31808123)
chr2 (159-204)||(37411257-37411302)
chr2 (161-205)||(1886893-1886937)
chr2 (149-202)||(5040735-5040790)
chr2 (149-204)||(14996226-14996282)
chr2 (160-204)||(18276522-18276566)
chr2 (149-197)||(18421971-18422019)
chr2 (149-204)||(21624267-21624323)
chr2 (117-149)||(26769611-26769643)
chr2 (149-197)||(31026703-31026751)
chr2 (149-197)||(34006994-34007042)
chr2 (160-204)||(36409641-36409685)
chr2 (149-201)||(39026822-39026874)
[»] chr3 (69 HSPs)
chr3 (148-204)||(26508111-26508167)
chr3 (149-204)||(1509540-1509595)
chr3 (161-204)||(4987306-4987349)
chr3 (149-204)||(7928451-7928506)
chr3 (149-196)||(20503474-20503521)
chr3 (149-200)||(28918006-28918057)
chr3 (149-204)||(51206356-51206411)
chr3 (162-204)||(14979182-14979224)
chr3 (150-204)||(21256990-21257044)
chr3 (149-199)||(25948890-25948940)
chr3 (164-204)||(3164043-3164083)
chr3 (149-204)||(8383258-8383313)
chr3 (149-204)||(10954953-10955008)
chr3 (149-204)||(15796297-15796352)
chr3 (161-204)||(21479119-21479162)
chr3 (161-204)||(34910318-34910361)
chr3 (149-204)||(49651789-49651844)
chr3 (149-204)||(55401076-55401131)
chr3 (149-198)||(17005622-17005671)
chr3 (149-198)||(18426956-18427005)
chr3 (152-197)||(24205047-24205092)
chr3 (149-197)||(4201404-4201452)
chr3 (149-205)||(8039838-8039894)
chr3 (164-204)||(16789668-16789708)
chr3 (149-197)||(20691327-20691375)
chr3 (152-204)||(34307786-34307838)
chr3 (152-204)||(35994744-35994795)
chr3 (149-204)||(7614418-7614473)
chr3 (149-204)||(8587024-8587079)
chr3 (161-204)||(10268501-10268544)
chr3 (160-199)||(11251984-11252023)
chr3 (161-204)||(14209114-14209157)
chr3 (149-204)||(16000019-16000074)
chr3 (149-204)||(27505247-27505302)
chr3 (149-204)||(28812516-28812571)
chr3 (159-198)||(29508451-29508490)
chr3 (149-204)||(34185126-34185181)
chr3 (162-197)||(41319326-41319361)
chr3 (159-205)||(1550140-1550186)
chr3 (150-204)||(10690266-10690320)
chr3 (163-197)||(12704674-12704708)
chr3 (149-191)||(14338486-14338528)
chr3 (159-197)||(16192763-16192801)
chr3 (163-197)||(21149075-21149109)
chr3 (158-204)||(21861570-21861616)
chr3 (149-199)||(32429383-32429433)
chr3 (149-199)||(38731224-38731274)
chr3 (170-204)||(40052333-40052367)
chr3 (151-204)||(4990972-4991025)
chr3 (116-149)||(8842418-8842451)
chr3 (159-204)||(9624642-9624687)
chr3 (149-198)||(9800047-9800096)
chr3 (159-204)||(11313813-11313858)
chr3 (161-202)||(14832102-14832143)
chr3 (159-204)||(23870572-23870617)
chr3 (152-205)||(25326426-25326479)
chr3 (149-197)||(25775516-25775565)
chr3 (163-204)||(34189428-34189469)
chr3 (161-205)||(3610633-3610677)
chr3 (149-204)||(8593137-8593193)
chr3 (165-205)||(11610521-11610561)
chr3 (161-204)||(14747562-14747606)
chr3 (149-197)||(16789020-16789068)
chr3 (117-149)||(20503554-20503586)
chr3 (160-204)||(25064910-25064954)
chr3 (160-204)||(27277852-27277896)
chr3 (153-193)||(39002044-39002084)
chr3 (149-204)||(40993338-40993394)
chr3 (159-199)||(49505167-49505207)
[»] scaffold0050 (1 HSPs)
scaffold0050 (149-204)||(70279-70334)
[»] chr7 (48 HSPs)
chr7 (149-204)||(24339643-24339698)
chr7 (149-204)||(19992002-19992057)
chr7 (161-204)||(25481903-25481946)
chr7 (150-201)||(26033465-26033516)
chr7 (149-202)||(5409839-5409892)
chr7 (149-205)||(32094023-32094080)
chr7 (152-204)||(11665446-11665498)
chr7 (152-204)||(13770692-13770744)
chr7 (149-204)||(3991325-3991380)
chr7 (149-204)||(7438707-7438762)
chr7 (149-204)||(9778501-9778556)
chr7 (149-204)||(11061079-11061134)
chr7 (149-199)||(21880158-21880208)
chr7 (159-204)||(18233611-18233656)
chr7 (151-204)||(24105679-24105732)
chr7 (149-198)||(27945048-27945097)
chr7 (152-197)||(43250001-43250046)
chr7 (149-197)||(9408337-9408385)
chr7 (149-201)||(18215189-18215241)
chr7 (160-204)||(29787383-29787427)
chr7 (149-201)||(43027472-43027524)
chr7 (160-199)||(2424620-2424659)
chr7 (165-204)||(8234147-8234186)
chr7 (149-200)||(15680814-15680865)
chr7 (159-198)||(18013087-18013126)
chr7 (149-204)||(20549792-20549847)
chr7 (149-204)||(28155571-28155626)
chr7 (153-204)||(35861965-35862016)
chr7 (149-199)||(1401031-1401081)
chr7 (149-199)||(7328694-7328744)
chr7 (158-204)||(8056957-8057002)
chr7 (159-197)||(12278843-12278881)
chr7 (161-199)||(30813818-30813856)
chr7 (162-204)||(32308121-32308163)
chr7 (149-198)||(5835254-5835303)
chr7 (163-204)||(7133295-7133336)
chr7 (152-197)||(10230079-10230124)
chr7 (160-197)||(11890933-11890970)
chr7 (161-198)||(13300417-13300454)
chr7 (149-197)||(18039006-18039055)
chr7 (159-196)||(19930954-19930991)
chr7 (159-204)||(42720903-42720948)
chr7 (149-197)||(6028633-6028681)
chr7 (152-196)||(13427585-13427629)
chr7 (149-197)||(15902830-15902878)
chr7 (159-199)||(17851437-17851477)
chr7 (160-196)||(27980805-27980841)
chr7 (149-185)||(39138464-39138500)
[»] chr6 (72 HSPs)
chr6 (149-204)||(7977833-7977888)
chr6 (149-204)||(16766698-16766753)
chr6 (149-204)||(28715296-28715351)
chr6 (149-205)||(10770677-10770733)
chr6 (149-204)||(5970111-5970166)
chr6 (149-204)||(7938117-7938172)
chr6 (149-204)||(9107373-9107428)
chr6 (161-204)||(12696325-12696368)
chr6 (149-204)||(34595135-34595190)
chr6 (149-205)||(7265596-7265652)
chr6 (151-203)||(31959161-31959213)
chr6 (149-204)||(7801159-7801214)
chr6 (149-204)||(9025497-9025552)
chr6 (149-204)||(16833309-16833364)
chr6 (161-204)||(17841604-17841647)
chr6 (159-205)||(7569181-7569227)
chr6 (158-196)||(16388245-16388283)
chr6 (159-204)||(1532241-1532286)
chr6 (149-198)||(9195757-9195806)
chr6 (149-198)||(9522898-9522947)
chr6 (159-204)||(19040353-19040398)
chr6 (161-198)||(31384927-31384964)
chr6 (152-204)||(1191706-1191758)
chr6 (152-204)||(1681759-1681811)
chr6 (149-204)||(8713980-8714036)
chr6 (149-204)||(9911531-9911587)
chr6 (153-197)||(17341671-17341715)
chr6 (160-204)||(34225823-34225867)
chr6 (149-204)||(426517-426572)
chr6 (149-204)||(853862-853917)
chr6 (149-204)||(3398620-3398674)
chr6 (159-198)||(7151419-7151458)
chr6 (149-204)||(8365522-8365577)
chr6 (161-204)||(8776988-8777031)
chr6 (149-204)||(9658880-9658935)
chr6 (149-204)||(15489735-15489790)
chr6 (161-200)||(17435204-17435243)
chr6 (169-204)||(25010225-25010260)
chr6 (150-197)||(25038075-25038122)
chr6 (149-200)||(28152104-28152154)
chr6 (149-204)||(32511669-32511724)
chr6 (149-204)||(33001292-33001347)
chr6 (153-204)||(33468389-33468440)
chr6 (149-195)||(1700362-1700408)
chr6 (152-198)||(2117083-2117129)
chr6 (149-199)||(7086801-7086851)
chr6 (159-197)||(17168902-17168940)
chr6 (159-205)||(30866157-30866203)
chr6 (163-197)||(34446573-34446607)
chr6 (156-201)||(2224230-2224275)
chr6 (149-198)||(6898284-6898333)
chr6 (149-194)||(7973665-7973710)
chr6 (159-204)||(7996391-7996436)
chr6 (159-204)||(8022365-8022410)
chr6 (159-204)||(8931615-8931660)
chr6 (163-204)||(10842533-10842574)
chr6 (159-204)||(13851737-13851782)
chr6 (151-196)||(26314639-26314684)
chr6 (159-204)||(26562690-26562735)
chr6 (149-201)||(31429006-31429059)
chr6 (160-197)||(31579239-31579276)
chr6 (149-197)||(403867-403915)
chr6 (149-204)||(3209382-3209438)
chr6 (149-204)||(4877943-4877999)
chr6 (161-197)||(6349752-6349788)
chr6 (149-197)||(9617442-9617490)
chr6 (149-197)||(11784219-11784267)
chr6 (161-197)||(18252766-18252802)
chr6 (149-205)||(21395311-21395366)
chr6 (149-204)||(24645481-24645537)
chr6 (149-204)||(32978902-32978958)
chr6 (159-199)||(34073360-34073400)
[»] chr5 (50 HSPs)
chr5 (149-204)||(21191059-21191114)
chr5 (150-205)||(24906305-24906360)
chr5 (149-204)||(41633736-41633791)
chr5 (152-205)||(21576751-21576804)
chr5 (149-204)||(6247623-6247678)
chr5 (149-204)||(7677706-7677761)
chr5 (149-204)||(21522751-21522806)
chr5 (149-204)||(21533317-21533372)
chr5 (161-204)||(39698542-39698585)
chr5 (149-204)||(42893361-42893416)
chr5 (151-204)||(14674270-14674323)
chr5 (149-198)||(40131628-40131677)
chr5 (152-204)||(31084324-31084376)
chr5 (149-200)||(8420032-8420083)
chr5 (149-204)||(13287402-13287457)
chr5 (161-204)||(43001801-43001844)
chr5 (163-197)||(4344750-4344784)
chr5 (158-204)||(22013415-22013461)
chr5 (159-197)||(38749576-38749614)
chr5 (159-204)||(6471902-6471947)
chr5 (152-197)||(25863212-25863257)
chr5 (152-197)||(31264446-31264491)
chr5 (149-205)||(17177026-17177082)
chr5 (156-204)||(27932236-27932284)
chr5 (149-197)||(28588677-28588725)
chr5 (149-205)||(30502391-30502447)
chr5 (149-205)||(30542734-30542790)
chr5 (149-204)||(3966504-3966559)
chr5 (149-204)||(19579702-19579757)
chr5 (149-204)||(21351908-21351963)
chr5 (149-204)||(21542031-21542086)
chr5 (150-197)||(30098334-30098381)
chr5 (149-204)||(36642765-36642820)
chr5 (149-204)||(36838544-36838599)
chr5 (159-197)||(5467991-5468029)
chr5 (150-200)||(7218271-7218321)
chr5 (149-199)||(17593725-17593775)
chr5 (119-149)||(21194063-21194093)
chr5 (149-195)||(43564891-43564937)
chr5 (152-197)||(7997172-7997217)
chr5 (158-202)||(14422907-14422949)
chr5 (149-198)||(22423815-22423864)
chr5 (159-204)||(24273043-24273088)
chr5 (159-204)||(24389126-24389171)
chr5 (159-204)||(41091270-41091315)
chr5 (161-206)||(131760-131807)
chr5 (149-197)||(2548395-2548443)
chr5 (149-204)||(15883988-15884044)
chr5 (117-149)||(22423762-22423794)
chr5 (150-194)||(30136678-30136722)
[»] scaffold0223 (1 HSPs)
scaffold0223 (161-204)||(20173-20216)
[»] scaffold0103 (1 HSPs)
scaffold0103 (161-204)||(51812-51855)
[»] scaffold0066 (1 HSPs)
scaffold0066 (161-204)||(33378-33421)
[»] scaffold0018 (2 HSPs)
scaffold0018 (130-197)||(192233-192300)
scaffold0018 (161-204)||(178833-178877)
[»] scaffold0044 (1 HSPs)
scaffold0044 (147-196)||(53189-53238)
[»] scaffold0021 (1 HSPs)
scaffold0021 (148-204)||(130483-130539)
[»] scaffold0004 (3 HSPs)
scaffold0004 (149-193)||(83172-83216)
scaffold0004 (161-204)||(92808-92851)
scaffold0004 (149-205)||(123625-123684)
[»] scaffold0652 (1 HSPs)
scaffold0652 (149-204)||(465-520)
[»] scaffold0361 (1 HSPs)
scaffold0361 (161-204)||(14531-14574)
[»] scaffold0011 (1 HSPs)
scaffold0011 (149-204)||(17752-17807)
[»] scaffold0003 (1 HSPs)
scaffold0003 (149-204)||(241595-241650)
[»] scaffold1528 (1 HSPs)
scaffold1528 (159-204)||(1036-1081)
[»] scaffold0126 (1 HSPs)
scaffold0126 (149-197)||(19153-19200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (149-205)||(63773-63829)
[»] scaffold0008 (1 HSPs)
scaffold0008 (153-205)||(263379-263431)
[»] scaffold0007 (1 HSPs)
scaffold0007 (152-204)||(225274-225326)
[»] scaffold0722 (1 HSPs)
scaffold0722 (161-204)||(7047-7090)
[»] scaffold0450 (1 HSPs)
scaffold0450 (149-204)||(8638-8693)
[»] scaffold0171 (1 HSPs)
scaffold0171 (149-204)||(23421-23476)
[»] scaffold0053 (1 HSPs)
scaffold0053 (149-204)||(8799-8854)
[»] scaffold0025 (1 HSPs)
scaffold0025 (149-203)||(23771-23826)
[»] scaffold0020 (1 HSPs)
scaffold0020 (149-204)||(135315-135370)
[»] scaffold0227 (1 HSPs)
scaffold0227 (158-204)||(7323-7369)
[»] scaffold0123 (1 HSPs)
scaffold0123 (150-204)||(44529-44583)
[»] scaffold0009 (2 HSPs)
scaffold0009 (149-187)||(174556-174594)
scaffold0009 (149-187)||(180069-180107)
[»] scaffold0598 (1 HSPs)
scaffold0598 (164-197)||(8071-8104)
[»] scaffold0036 (1 HSPs)
scaffold0036 (149-198)||(9750-9799)
[»] scaffold0022 (1 HSPs)
scaffold0022 (152-197)||(90851-90896)
[»] scaffold0793 (2 HSPs)
scaffold0793 (117-149)||(4819-4851)
scaffold0793 (161-204)||(4898-4942)
[»] scaffold0236 (1 HSPs)
scaffold0236 (149-197)||(25771-25819)
[»] scaffold0136 (1 HSPs)
scaffold0136 (161-197)||(3864-3900)


Alignment Details
Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 25192215 - 25192405
Alignment:
Q  14 tggacatcaagcttgttccctcatattcagaaatggagaagtcaatatggttaactactctctcctttctcactatcaatatatcttttaatgtttaatt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  25192215 tggacatcaagcttgttccctcatattcagaaatggagaagtcaatatggttaactactgtctcctttatcactatcaatatatcttttaatgtttaatt 25192314  T
Q  114 cttatctataaagcacggacactcctcggattaggcaccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  25192315 cttatctataaagtacggatactcctcggattaggcaccgacacttataattatactgaattatgtcactttttcaaattattagctgtgt 25192405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 25566897 - 25566842
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  25566897 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 25566842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 15816132 - 15816187
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  15816132 caccgacacttataattacactaaattatgtgattttttcaaattattagttgtgt 15816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 4948708 - 4948659
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||    
T  4948708 caccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 14134755 - 14134706
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  14134755 caccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 2572059 - 2572114
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||    
T  2572059 caccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgt 2572114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 8343028 - 8342977
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| || |||||||||| |||||||| ||||||||||||||||||||    
T  8343028 caccgacacttgtaattacactaaattatgtgattttttcaaattattagct 8342977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 22596038 - 22595995
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgt 22595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 22652032 - 22651977
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| | |||||||||| ||||||||||||||||||||||||    
T  22652032 caccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgt 22651977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 29510307 - 29510362
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| |||||||| ||| ||||||||||||||||||||||||    
T  29510307 caccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgt 29510362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 40332247 - 40332168
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgttcctatcgtgtccaatgtccgtat 228  Q
    |||||||| || ||||||||||||||||||| ||||| |||||||||| || |||| | | ||||||||  |||||||||    
T  40332247 caccgacacttgtaattacactgaattatgtgattttctcaaattatttgcagtgtccgtgtcgtgtccggtgtccgtat 40332168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 4611580 - 4611535
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  4611580 tataattacactgaattatgttattttctcaaattattagcggtgt 4611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 7658519 - 7658470
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||||||||||    
T  7658519 caccgacaaatataattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 18407777 - 18407720
Alignment:
Q  147 ggcaccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||||| || ||||||||||||||||||| |||||||  |||||||||||||||    
T  18407777 ggcagcgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgt 18407720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 20679398 - 20679447
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||    
T  20679398 caccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 34897131 - 34897086
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  34897131 tataattacactgaattatgtgattttctcaaattattagcggtgt 34897086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 44067569 - 44067524
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattatta 44067524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 3025597 - 3025557
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 11927089 - 11927137
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||||||||||||||||||||| ||||| |||||||||||    
T  11927089 caccgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 18170485 - 18170529
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaatt 193  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  18170485 caccgacatttgtaattacattgaattatgtaattttttcaaatt 18170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 18634053 - 18634097
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaatt 193  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  18634053 caccgacatttgtaattacattgaattatgtaattttttcaaatt 18634097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 18646228 - 18646180
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||| ||| |||||||||||| ||||||||||||||||||||||    
T  18646228 caccaacatatatgattacactgaatcatgtcattttttcaaattatta 18646180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 20873125 - 20873077
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||    
T  20873125 caccgacacttgtaattacactaaattatgtgattttttcaaattatta 20873077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 22197757 - 22197801
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||| |||||||| | |||||||||||||||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgtt 22197801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 30077402 - 30077442
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctg 201  Q
    ||||||||||||||||||| || ||||||||||||||||||    
T  30077402 taattacactgaattatgtgatgttttcaaattattagctg 30077442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 41831958 - 41831998
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgt 41831998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 4298889 - 4298944
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| | |||||||| ||||||||||||||||| ||||||    
T  4298889 caccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgt 4298944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 8343360 - 8343321
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  8343360 taattacactaaattatgtgattttttcaaattattagct 8343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 13203687 - 13203648
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  13203687 tataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 13436967 - 13437022
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || | |||||  |||||||||| ||||||||||||||||||||||||    
T  13436967 caccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgt 13437022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 13844599 - 13844654
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  |||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  13844599 caccgacacatataattacactcaattatgtgattttctcaaattattagcagtgt 13844654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 21465456 - 21465389
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgttcctatcgtgtccaatgtccgtat 228  Q
    ||||||||  ||||||| | |||||||||||||||||||||||| | | ||||||||  |||||||||    
T  21465456 taattacatcgaattatatgattttttcaaattattagctgtgtccgtgtcgtgtccggtgtccgtat 21465389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 24613576 - 24613522
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||| |||||||||||||||||    
T  24613576 caccgacacttgtaattacacttaattatgtgattttt-caaattattagctgtgt 24613522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 30271306 - 30271349
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||    
T  30271306 taattacactgcattatgtgattttttcaaatgattagctgtgt 30271349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 31236580 - 31236635
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  |||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgt 31236635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 36450769 - 36450812
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgt 36450812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 22493550 - 22493504
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattat 195  Q
    ||||||||| ||| ||||||||||||||||| ||||||| |||||||    
T  22493550 caccgacatatatgattacactgaattatgtgattttttaaaattat 22493504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 34201059 - 34201097
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  34201059 tataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 8017539 - 8017494
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||| ||| |||||||| |||||||||||||||||| |||||||    
T  8017539 cgacatctatgattacactcaattatgtcattttttcatattatta 8017494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 14731758 - 14731713
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  14731758 tataattacactaaattatgtgattttctcaaattattagcagtgt 14731713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 24362215 - 24362260
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||| | ||||||||||||| ||||    
T  24362215 tataattacactgaattatgtgattctctcaaattattagcggtgt 24362260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 33382022 - 33382079
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgttc 206  Q
    ||||||||  ||||||||| ||||||||||||||||| | ||||||||| | ||||||    
T  33382022 caccgacacatataattactctgaattatgtcattttcttaaattattatcggtgttc 33382079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 35519833 - 35519866
Alignment:
Q  172 aattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| |||||||||||||||||||||||||    
T  35519833 aattatgtgattttttcaaattattagctgtgtt 35519866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 39954292 - 39954337
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  39954292 tataattacactaaattatgtgattttctcaaattattagcggtgt 39954337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 41838144 - 41838181
Alignment:
Q  167 cactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  41838144 cactgaattatgtgatttttttaaattattagctgtgt 41838181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 4786341 - 4786389
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||||||||||||||||||||| ||||| | |||||||||    
T  4786341 caccgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 197
Target Start/End: Original strand, 6211456 - 6211488
Alignment:
Q  165 tacactgaattatgtcattttttcaaattatta 197  Q
    |||| ||||||||||||||||||||||||||||    
T  6211456 tacattgaattatgtcattttttcaaattatta 6211488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 7442889 - 7442845
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||||||||||||| ||||| | ||||||||||| |||||    
T  7442889 taattacactgaattatgtaattttatgaaattattagcggtgtt 7442845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 11944721 - 11944673
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  |||||||||||||| |||||| ||||| |||||||||||    
T  11944721 caccgacacatataattacactgagttatgtgattttatcaaattatta 11944673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 12559123 - 12559159
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  12559123 attacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 12985448 - 12985400
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||| ||| |||||| |||||||||| ||||| |||||||||||    
T  12985448 caccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 24669489 - 24669441
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| ||||  |||||||||||    
T  24669489 caccgacacttgtaattacactgaattatgtaatttcctcaaattatta 24669441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 28745551 - 28745499
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||| |||||||||| | ||||||||||||||||| ||||    
T  28745551 cgacatttgtagttacattgaattatgtgaatttttcaaattattagcagtgt 28745499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 204
Target Start/End: Complemental strand, 46776 - 46683
Alignment:
Q  119 ctataaagcacggacactcctcggattaggc--------accgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||||||||||||||||||||||||||        |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgtcgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgt 46683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21945559 - 21945504
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  21945559 caccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgt 21945504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8423721 - 8423776
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  8423721 caccgacatttataattacactgaattatgtgattttctcaaattattagcggtgt 8423776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 54580026 - 54580081
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  54580026 caccgacacttataattacactgaattatgtgattttttcaaattattagttgtgt 54580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 29205500 - 29205444
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||    
T  29205500 caccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgtt 29205444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 30299003 - 30298947
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatt-ttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  30299003 caccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgt 30298947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 30327871 - 30327815
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatt-ttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  30327871 caccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgt 30327815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 2361978 - 2362033
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  2361978 caccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgt 2362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 23292989 - 23293044
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| |||||||||||| ||||||||||||||||||||||||    
T  23292989 caccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgt 23293044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 11596367 - 11596411
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  11596367 taattacactgaattatgtgattttttcaaattattagctttgtt 11596411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 49431082 - 49431026
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| | |||||||||||||||||||||||    
T  49431082 caccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgt 49431026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 3947781 - 3947824
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||  ||||||||||||||||||||||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgt 3947824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 28964263 - 28964302
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagct 200  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  28964263 taattacactgaattatgtgattttttcaaattattagct 28964302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 37203308 - 37203265
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| |||||||||||||||||||||||||||| ||||    
T  37203308 taattacactaaattatgtcattttttcaaattattagccgtgt 37203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 51701302 - 51701259
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  51701302 taattacactcaattatgtaattttttcaaattattagctgtgt 51701259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 12895119 - 12895172
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||||||| || |||||||  |||||||||| ||||||||||||||||||||||    
T  12895119 caccgacacttgtaattactttgaattatgtgattttttcaaattattagctgt 12895172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 15029811 - 15029766
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||    
T  15029811 tataattacactgaattatgtgatattttcaaattattagcagtgt 15029766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 32910596 - 32910559
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||||||||| |||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattatta 32910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 35157988 - 35158037
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| ||||||||||||| |||||||| |||||| |||||||||||    
T  35157988 caccgacacttataattacactaaattatgtgatttttccaaattattag 35158037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 6485614 - 6485662
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||    
T  6485614 caccgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 12895277 - 12895325
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| ||||||||||||  |||||||| |||||||||||||||||    
T  12895277 caccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 14465090 - 14465134
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||    
T  14465090 taattacattgaattatgtgattttttcaaattattaggtgtgtt 14465134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 38148731 - 38148783
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||| ||||    
T  38148731 cgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgt 38148783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 47264039 - 47263991
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| ||||||||| ||||||||| |||||| |||||||||||||    
T  47264039 cgacatttgtaattacacagaattatgtgatttttacaaattattagct 47263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Original strand, 32273538 - 32273585
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||  ||||||||||| |||||||||||||||||| ||||||    
T  32273538 ttataattattctgaattatgttattttttcaaattattagttgtgtt 32273585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 36635370 - 36635331
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  36635370 tataattacactgaattatgtgattttctcaaattattag 36635331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 38847027 - 38847070
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||| || | ||||||||||||||||||||||||    
T  38847027 taattacactgaataatatgattttttcaaattattagctgtgt 38847070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 903968 - 903930
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  903968 tataattacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 20743295 - 20743329
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||||| |||||||||||    
T  20743295 attacactgaattatgtcattttctcaaattatta 20743329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 22440613 - 22440651
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  22440613 tataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 24343553 - 24343515
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  24343553 tataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 30982881 - 30982931
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||| |||||||||||||||| ||||| ||||| |||||| ||||||    
T  30982881 caccgacacttataattacactgaaatatgtgattttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 31243565 - 31243599
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||||| |||||||||||    
T  31243565 attacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 40179649 - 40179687
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  40179649 tataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 50848320 - 50848354
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||| |||||||||||||||||||    
T  50848320 attacactgaattatatcattttttcaaattatta 50848354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 4383419 - 4383375
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  4383419 gacatttgtaattacactgaattatgtga-tttttcaaattattag 4383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 11651155 - 11651192
Alignment:
Q  167 cactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11651155 cactgaattatgtgatttttttaaattattagctgtgt 11651192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 12797341 - 12797389
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||    
T  12797341 caccgacacttgtaattacactgaattatgtga-tttttcaaattattag 12797389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 16189754 - 16189709
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||||||||||||| ||||| ||||||| ||||| |||||    
T  16189754 ataattacactgaattatgtgattttctcaaatttttagcggtgtt 16189709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 40613496 - 40613451
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  40613496 tataattacactgaattatgtgattttctcaaaatattagcggtgt 40613451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 715543 - 715575
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  715543 atctatgaagcacggacactcctcggattaggc 715575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 715622 - 715666
Alignment:
Q  161 taattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||    
T  715622 taattacactgaattatgtgattttttttaaattattagctgtgt 715666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 752869 - 752901
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  752869 atctatgaagcacggacactcctcggattaggc 752901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 752948 - 752992
Alignment:
Q  161 taattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||    
T  752948 taattacactgaattatgtgattttttttaaattattagctgtgt 752992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 5775361 - 5775409
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  5775361 caccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 14126118 - 14126162
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||||||||||||||||||||| | ||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattatta 14126162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 16303269 - 16303317
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || |||||||||| |||||| ||||||||||||| |||||    
T  16303269 caccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 19312391 - 19312310
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttc----aaattattagctgtgttcctatcgtgtccaatgtccgt 226  Q
    |||||| | ||||||||||||||||| |||| |||||||     ||||||||||||||||   | |||||||||||||||||    
T  19312391 caccgatacttataattacactgaatcatgtgatttttttttttaaattattagctgtgtcggtgtcgtgtccaatgtccgt 19312310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 24999089 - 24999045
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||| ||| ||||||||||||||| | ||||||    
T  24999089 ataattacactgaattgtgtgattttttcaaattatcaactgtgt 24999045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 28158054 - 28158014
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||||| | ||| ||||||||||||||||||||||||    
T  28158054 tataattacattaaatcatgtcattttttcaaattattagc 28158014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 28470485 - 28470453
Alignment:
Q  118 tctataaagcacggacactcctcggattaggca 150  Q
    ||||| |||||||||||||||||||||||||||    
T  28470485 tctatgaagcacggacactcctcggattaggca 28470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 36386226 - 36386262
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||| |||| |||||||||||    
T  36386226 taattacactgaattatgtccttttctcaaattatta 36386262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 42640585 - 42640527
Alignment:
Q  149 caccgacatttataattacactgaattatgtca---ttttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |   |||||||||||||| ||||||||    
T  42640585 caccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgt 42640527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 56257978 - 56257934
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| | ||||| ||||||||||||| ||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagtgt 56257934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 1486712 - 1486767
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  1486712 caccgacacttataattacactgaattatgtgattttttcaaattattagctgtgt 1486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 113343 - 113300
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgt 113300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21378634 - 21378579
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |||||||||| |||||||||||||    
T  21378634 caccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgt 21378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 22515890 - 22515945
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  22515890 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 22515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 24577189 - 24577244
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||| |||||    
T  24577189 caccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 24577244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 38078664 - 38078719
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||||||||||||    
T  38078664 caccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 38078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 48450592 - 48450646
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||| || |||||||||| |||||||| |||||||||||||||||||||||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgtt 48450646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 398778 - 398823
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  398778 tataattacactgaattatgtgattttttcaaattattagcggtgt 398823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 5944339 - 5944283
Alignment:
Q  149 caccgacatttataattacactgaattatgtca--ttttttcaaattattagctgtg 203  Q
    |||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||    
T  5944339 caccgacacttataattacactgaattatgtgattttttttcaaattattagctgtg 5944283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 6612174 - 6612227
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||| ||||    
T  6612174 caccgacacttgtaattacactgaattatgtaattttttcaaattattaactgt 6612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 31015097 - 31015044
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| || ||||||||||||||||||| ||||| ||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 18190114 - 18190166
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||| |||||    
T  18190114 cgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgt 18190166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 40258936 - 40258984
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||    
T  40258936 caccgacacttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 1704995 - 1705050
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||| |||||    
T  1704995 caccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgt 1705050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 1864883 - 1864938
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  1864883 caccgacacatataattacactgaattatgtgattttctcaaattattaactgtgt 1864938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 16927188 - 16927239
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||| |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  16927188 caccaacatatataattacactgaattatatgattttttcaaattattagct 16927239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 18337385 - 18337338
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||    
T  18337385 caccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 19058859 - 19058914
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| || |||| ||||||||||||||||    
T  19058859 caccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgt 19058914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 22881619 - 22881674
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||    
T  22881619 caccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgt 22881674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 23738722 - 23738679
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgt 23738679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 31672910 - 31672953
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  31672910 taattacactgaattaagtgattttttcaaattattagctgtgt 31672953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 36878517 - 36878462
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  36878517 caccgacacctataattacactgaattatgtgattttctcaaattattagcggtgt 36878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 37598887 - 37598833
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||    
T  37598887 caccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgt 37598833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 42359452 - 42359507
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||| ||| |||||||||||||||||| |||||    
T  42359452 caccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgt 42359507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 46348386 - 46348441
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||| | ||||||||||||||||||||||||    
T  46348386 caccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgt 46348441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 12443476 - 12443518
Alignment:
Q  162 aattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgt 12443518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 22794091 - 22794129
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  22794091 tataattacactgtattatgtcattttttcaaattatta 22794129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 5898279 - 5898324
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  5898279 tataattacactgaattatgtgattttttcagattattagcggtgt 5898324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 17754357 - 17754312
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  17754357 tatagttacactgaattatgtaattttttcaaattattagcggtgt 17754312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Original strand, 23531786 - 23531831
Alignment:
Q  154 acatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||    
T  23531786 acatttataattacattgaattatgtgatattttcaaattattagc 23531831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 30847737 - 30847778
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  30847737 attacattgaattatgtcattttttcaaattattagcagtgt 30847778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 40181917 - 40181872
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  40181917 tataattacactgaattatgtgattttctcaaattattagcagtgt 40181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 8010293 - 8010341
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    ||||| ||||||||| |||||||||| | ||||||||||||||||||||    
T  8010293 cgacacttataattatactgaattatataattttttcaaattattagct 8010341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 47989553 - 47989505
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| ||||||| |||||||||    
T  47989553 caccgacacttgtaattacactgaattatgtgatttttttaaattatta 47989505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 51410081 - 51410025
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||| |||||    
T  51410081 caccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgt 51410025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 2896124 - 2896179
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| ||||  ||||||||||||||| ||||| ||||||||||||| ||||    
T  2896124 caccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgt 2896179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 5376503 - 5376558
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||| | ||||||||||| ||||    
T  5376503 caccgacacttttaattacactgaattatgttattttcttaaattattagcggtgt 5376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 7918224 - 7918263
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  7918224 tataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 9629903 - 9629958
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||||| |||||||||||| | ||||| ||||||||||||| ||||    
T  9629903 caccgacacttataatcacactgaattatatgattttatcaaattattagcggtgt 9629958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 25272538 - 25272483
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||| ||| ||||||    
T  25272538 caccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgt 25272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 28273091 - 28273146
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||| | |||||||||||| ||||| |||||    
T  28273091 caccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgt 28273146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 34298482 - 34298443
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattag 34298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 41877473 - 41877528
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| ||||| ||||||||||||| ||||    
T  41877473 caccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 6427396 - 6427350
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||| |||||||||| ||||| ||||||||||||| |||||    
T  6427396 tataattacattgaattatgtgattttctcaaattattagcggtgtt 6427350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 7353496 - 7353546
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||| |||||||||||| |||||||| |||||||| ||||| ||||    
T  7353496 caccgacatatataattacactaaattatgtaattttttcgaattaatagc 7353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 21366039 - 21366077
Alignment:
Q  165 tacactgaattatgtcattttttcaaattattagctgtg 203  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtg 21366077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 40747786 - 40747824
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  40747786 tataattacattgaattatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 44482286 - 44482240
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattat 195  Q
    ||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  44482286 caccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 9828100 - 9828051
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  || |||||||||||||||||| ||||| ||||||||||||    
T  9828100 caccgacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 202
Target Start/End: Complemental strand, 15323215 - 15323166
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||| ||| ||||||||| |||||||| ||||||||||||||||| ||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgt 15323166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 17778602 - 17778550
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||||   ||||| ||||||||||||||||||||||||    
T  17778602 caccgacacttgtaattacactg---tatgtgattttttcaaattattagctgtgt 17778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 18471355 - 18471299
Alignment:
Q  150 accgacatttataattacactgaattatgtcatttttt--caaattattagctgtgt 204  Q
    ||||||| || |||||| |||||||||||| |||||||  |||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgt 18471299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 19324608 - 19324563
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||||    
T  19324608 tataattacactgaattatgtgattttctcaaattatcagcagtgt 19324563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 25098568 - 25098613
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||| ||| ||||    
T  25098568 tataattacactgaattatgtgattttctcaaattatcagcggtgt 25098613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 25452162 - 25452207
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||||||||||||  ||||| ||||||||||||| |||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgtt 25452207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 26238129 - 26238170
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgt 26238170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 34741874 - 34741829
Alignment:
Q  158 ttataattacactgaattatgtcatt-ttttcaaattattagctgt 202  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||    
T  34741874 ttataattacacttaattatgtcattttttttaaattattagctgt 34741829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 35702535 - 35702572
Alignment:
Q  112 ttcttatctataaagcacggacactcctcggattaggc 149  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  35702535 ttcttaactatgaagcacggacactcctcggattaggc 35702572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 197
Target Start/End: Complemental strand, 42325601 - 42325568
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||||| |||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 46914043 - 46914084
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaa 191  Q
    ||||||||||||||||||| |||||||||| ||||| |||||    
T  46914043 accgacatttataattacattgaattatgttattttctcaaa 46914084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 1815313 - 1815265
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| ||||||| |||| ||||    
T  1815313 caccgacacttgtaattacactgaattatgtgattttttaaaataatta 1815265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 5898206 - 5898234
Alignment:
Q  119 ctataaagcacggacactcctcggattag 147  Q
    |||||||||||||||||||||||||||||    
T  5898206 ctataaagcacggacactcctcggattag 5898234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 13011230 - 13011274
Alignment:
Q  161 taattacactgaattatgtcatttt-ttcaaattattagctgtgt 204  Q
    |||||||||| |||||||| ||||| |||||||||||||||||||    
T  13011230 taattacacttaattatgtgatttttttcaaattattagctgtgt 13011274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 13997939 - 13997891
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||||||||||||||||||||| ||||||| |||| ||||    
T  13997939 caccgacacatataattacactgaattatgtgatttttttaaataatta 13997891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Complemental strand, 23622012 - 23621972
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| ||| | ||||||||||||||||||||||||    
T  23622012 ttacactgaagtatataattttttcaaattattagctgtgt 23621972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 23653040 - 23653004
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  23653040 ttacactgaagtatgtgattttttcaaattattagct 23653004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 24462679 - 24462735
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttt-tcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||| | ||||||  |||||||||||||||||    
T  24462679 caccgacagatataattacactgaattatataatttttcgcaaattattagctgtgt 24462735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 25361932 - 25361896
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattat 195  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  25361932 tataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 28674856 - 28674808
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||| |||||||| |||||||||||| ||||| |||||||||||    
T  28674856 caccaacatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 34712396 - 34712436
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
T  34712396 tataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 41017407 - 41017455
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||| |||||||||| | |||||||||||||| |||||||||||    
T  41017407 caccaacatatataattacattaaattatgtcattttctcaaattatta 41017455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 48148040 - 48148096
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    ||||||||| ||||||||||||||||||| | | |||||| ||||||||||| ||||    
T  48148040 caccgacatatataattacactgaattatatgatttttttaaaattattagcggtgt 48148096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 12668426 - 12668475
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  12668426 caccgacacttataattacactgaattatgtcattttttcaaattattag 12668475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 30335473 - 30335418
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  30335473 caccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgt 30335418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 21374673 - 21374757
Alignment:
Q  119 ctataaagcacggacactcctcggattaggcaccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||||||  |||||| |||||||||||   |||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  21374673 ctatgaagcacatacactcttcggattaggcgt-gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgt 21374757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 2438722 - 2438777
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||    
T  2438722 caccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgt 2438777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 11223866 - 11223921
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||    
T  11223866 caccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgt 11223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 36756347 - 36756402
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||    
T  36756347 caccgacacttataattacactgaattatgttatttcttcaaattattagttgtgt 36756402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 15657920 - 15657871
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  15657920 caccgacatttgtaattacactgaattatgtgatttttacaaattattag 15657871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 28677955 - 28677910
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  28677955 tataattacactgaattatgtgattttttcaaattattagcggtgt 28677910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 12940941 - 12940993
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||||||||||||||| | |||||||||||||||||| |||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgt 12940993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 30717536 - 30717584
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    ||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  30717536 cgacacttgtaattacactgaattatgtgattttttcaaattattagct 30717584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 18841016 - 18841071
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||    
T  18841016 caccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgt 18841071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 20539677 - 20539732
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||| | ||||||||||||||||||||||||    
T  20539677 caccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgt 20539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 37559033 - 37558978
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| |||||||||| |||||| |||||||||||||||||    
T  37559033 caccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgt 37558978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 42832279 - 42832334
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||| ||||    
T  42832279 caccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgt 42832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 30404855 - 30404901
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||| || ||||||||||||||||||| |||||||||||||||||    
T  30404855 ccgacacttgtaattacactgaattatgtgattttttcaaattatta 30404901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 10535765 - 10535810
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattatta 10535810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 21616808 - 21616763
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  21616808 tataattacactgaattatgtgattttctcaaattattagcggtgt 21616763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 23921302 - 23921261
Alignment:
Q  156 atttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  23921302 atttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 195
Target Start/End: Original strand, 11308021 - 11308053
Alignment:
Q  163 attacactgaattatgtcattttttcaaattat 195  Q
    |||||||||||||||||||||||||||||||||    
T  11308021 attacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 15972929 - 15972881
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||| ||| |||||||||||||||||    
T  15972929 caccgacacttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 18420437 - 18420493
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| |||||||| || |||||||||| ||||| ||||||||||||| |||||    
T  18420437 caccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgtt 18420493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 19536400 - 19536456
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||| |||||    
T  19536400 caccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 19536456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 21782832 - 21782876
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgt 21782876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 974803 - 974748
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||||||| |||| || ||||||||||||||| |||||    
T  974803 caccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgt 974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 4882702 - 4882749
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||| || ||||||||||||||||| |||||||||||||| ||||||    
T  4882702 cgacacttgtaattacactgaattatatcattttttcaaataattagc 4882749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23718082 - 23718027
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 23718027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 24105754 - 24105699
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgt 24105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 24894433 - 24894390
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgt 24894390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 27460070 - 27460027
Alignment:
Q  162 aattacactgaattatgtcatttttt-caaattattagctgtgt 204  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgt 27460027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 29176496 - 29176551
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||| |||||||||||||||||||||| |  |||||||||||||| ||||||    
T  29176496 caccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgt 29176551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 38117174 - 38117217
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||||    
T  38117174 taattacaccgaagtatgtgattttttcaaattattagctgtgt 38117217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 39323308 - 39323265
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgt 39323265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 44860376 - 44860321
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||  ||||| ||||||||||||| ||||    
T  44860376 caccgacacatataattacactgaattatgcgattttctcaaattattagcggtgt 44860321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 6940310 - 6940256
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||| || |||||||||| |||||||| | ||||| ||||||||||||||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgt 6940256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 34691808 - 34691858
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||  ||||||||||||||||||| | ||||| |||||||||||||    
T  34691808 caccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 34714220 - 34714270
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||  ||||||||||||||||||| | ||||| |||||||||||||    
T  34714220 caccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 40361767 - 40361805
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  40361767 tataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 5367248 - 5367199
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  ||||||||||||||||||||| ||||  ||||||||||||    
T  5367248 caccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 28341872 - 28341909
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttt 186  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  28341872 caccgacatctataattacattgaattatgtcattttt 28341909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 28412395 - 28412358
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  28412395 ataattacactgaattatgtgattttatcaaattatta 28412358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 31808123 - 31808078
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| | ||||||||||| ||||    
T  31808123 tataattacactgaattatgtgattttgttaaattattagcggtgt 31808078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 37411257 - 37411302
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| |||||||||||||| ||||| ||||||||||||| ||||    
T  37411257 tataatcacactgaattatgtgattttctcaaattattagcggtgt 37411302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 1886893 - 1886937
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| |||||||||| | ||||||||||||||| |||||||    
T  1886893 taattacattgaattatgtaaatttttcaaattattaactgtgtt 1886937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 5040790 - 5040735
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt--caaattattagctgt 202  Q
    |||||||| || |||||||| |||||||||| |||||||  |||||||||||||||    
T  5040790 caccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgt 5040735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 14996226 - 14996282
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttt-ttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||| | ||||| |||||||||||||||||||    
T  14996226 caccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgt 14996282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 18276566 - 18276522
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||| || ||||| ||||||||||||| ||||    
T  18276566 ataattacactgaattaagtgattttctcaaattattagcggtgt 18276522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 18422019 - 18421971
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| || |||| |||||||||    
T  18422019 caccgacacttgtaattacactgaattatgtgatatttttaaattatta 18421971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21624323 - 21624267
Alignment:
Q  149 caccgacatttataattacactgaattatg-tcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||||||||||| |  |||||| ||||||||||||||||    
T  21624323 caccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgt 21624267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 26769643 - 26769611
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  26769643 atctatgaagcacggacactcctcggattaggc 26769611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 31026751 - 31026703
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||| ||| |||||| |||||||||||||||| | |||||||||    
T  31026751 caccgacatatatgattacattgaattatgtcattttcttaaattatta 31026703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 34006994 - 34007042
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||| ||||||||||||||||||| ||| |||||||||||    
T  34006994 caccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 36409641 - 36409685
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| |||||||| ||||||||||||||| ||| ||||    
T  36409641 ataattacactaaattatgtgattttttcaaattatcagcggtgt 36409685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 39026874 - 39026822
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctg 201  Q
    |||||||||||||||||||| | || ||||| ||||| |||| ||||||||||    
T  39026874 caccgacatttataattacattaaaatatgtgattttctcaagttattagctg 39026822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 26508167 - 26508111
Alignment:
Q  148 gcaccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  26508167 gcaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 26508111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 1509595 - 1509540
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  1509595 caccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 1509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 4987306 - 4987349
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgt 4987349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 7928506 - 7928451
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7928506 caccgacacatataattacactgaattatgtgattttttcaaattattagcggtgt 7928451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 20503521 - 20503474
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||    
T  20503521 caccgacacttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 28918057 - 28918006
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  28918057 caccgacacttgtaattacactgaattatgtgattttttcaaattattagct 28918006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 51206356 - 51206411
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || || |||||||||||||||| ||||||||||||||||||||||||    
T  51206356 caccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgt 51206411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 14979224 - 14979182
Alignment:
Q  162 aattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgt 14979182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 21256990 - 21257044
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||| || |||||| |||||||||||| ||||||||||||||||||||||||    
T  21256990 accgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgt 21257044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 25948890 - 25948940
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  25948890 caccaacacttataattacactgaattatgtgattttttcaaattattagc 25948940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 3164043 - 3164083
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgt 3164083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 8383313 - 8383258
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||| | ||||| ||||||||||||| ||||    
T  8383313 caccgacacttataattacactgaattatatgattttctcaaattattagcggtgt 8383258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 10955008 - 10954953
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || | ||||||||||||||||| |||||||||||||||||| |||||    
T  10955008 caccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgt 10954953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 15796297 - 15796352
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||| | ||||||||||||||||| ||||||    
T  15796297 caccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgt 15796352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 21479162 - 21479119
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgt 21479119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 34910361 - 34910318
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  34910361 taattacactgaattatgtgattttttcaaattattagttgtgt 34910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 49651789 - 49651844
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||||||| ||||    
T  49651789 caccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgt 49651844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 55401131 - 55401076
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||    
T  55401131 caccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgt 55401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 17005622 - 17005671
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  17005622 caccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 18427005 - 18426956
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||| ||||||||||| ||||||||| ||||||| ||||||||||    
T  18427005 caccgacatatataattacaccgaattatgtgattttttgaaattattag 18426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 24205047 - 24205092
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattatta 24205092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 4201452 - 4201404
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||| |||||||||||| |||||||| |||||||||||||||||    
T  4201452 caccaacatatataattacacttaattatgtgattttttcaaattatta 4201404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 8039838 - 8039894
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||  ||||||||||||||||||| | ||||| ||||||||||||| |||||    
T  8039838 caccgacacatataattacactgaattatataattttctcaaattattagcggtgtt 8039894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 16789668 - 16789708
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgt 16789708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 20691375 - 20691327
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||| ||||||||||||||||||||||| |||||||||||    
T  20691375 caccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 34307786 - 34307838
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| |||||||||||||||| ||||| ||||| ||||||||||||| ||||    
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgt 34307838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 35994744 - 35994795
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || ||||||||||||||||||| | ||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgt 35994795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 7614418 - 7614473
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| |||||||| |||||||||||| ||||| | ||||||||| ||||||    
T  7614418 caccgacatatataattatactgaattatgtgattttcttaaattattaactgtgt 7614473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8587024 - 8587079
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||| ||| |||||    
T  8587024 caccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgt 8587079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 10268501 - 10268544
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||    
T  10268501 taattacactaaattatgtgattttttcaaattattaactgtgt 10268544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 11252023 - 11251984
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 14209157 - 14209114
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||    
T  14209157 taattacactgaattatgtgattttttaaaattattagttgtgt 14209114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 16000019 - 16000074
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || || |||||||||||||||| ||||||| |||||||||| |||||    
T  16000019 caccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgt 16000074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 27505302 - 27505247
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| ||||||  ||||||||||||||||    
T  27505302 caccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgt 27505247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 28812571 - 28812516
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||| ||||||||||||||| |||| ||||||||||||| |||||    
T  28812571 caccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgt 28812516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 29508490 - 29508451
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  29508490 tataattacactgaattatatgattttttcaaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 34185126 - 34185181
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  34185126 caccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgt 34185181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 41319326 - 41319361
Alignment:
Q  162 aattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41319326 aattacattgaattatgtcattttttcaaattatta 41319361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 1550186 - 1550140
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  1550186 tataattacactgaatagtgtgattttttcaaattattagcggtgtt 1550140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 10690266 - 10690320
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||  ||||||||||||||||||||| ||||| ||| ||||||||| ||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctcagattattagcggtgt 10690320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Original strand, 12704674 - 12704708
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    |||||| ||||||||||||||||||||||||||||    
T  12704674 attacattgaattatgtcattttttcaaattatta 12704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 14338486 - 14338528
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaa 191  Q
    ||||||||||| | |||||| ||||||||||||||||||||||    
T  14338486 caccgacatttgtgattacattgaattatgtcattttttcaaa 14338528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 16192763 - 16192801
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  16192763 tataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 21149109 - 21149075
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||||| |||||||||||    
T  21149109 attacactgaattatgtcattttctcaaattatta 21149075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 21861616 - 21861570
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| |||||||||||||||||||||||| |||||| ||| ||||||    
T  21861616 ttatgattacactgaattatgtcatttttccaaattgttatctgtgt 21861570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 32429383 - 32429433
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||| |||||||||| ||||||||||||| ||||| | |||||||||||    
T  32429383 caccgatatttataattgcactgaattatgtgattttcttaaattattagc 32429433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 38731274 - 38731224
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||  ||||| ||||||||||||||| ||||||| |||||||||||    
T  38731274 caccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 40052367 - 40052333
Alignment:
Q  170 tgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| ||||||||||||||||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgt 40052333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 4990972 - 4991025
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| || ||||||||||||||||||| ||||| ||||| ||||||| ||||    
T  4990972 ccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgt 4991025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 8842451 - 8842418
Alignment:
Q  116 tatctataaagcacggacactcctcggattaggc 149  Q
    ||||||| ||||||||||||||||||||||||||    
T  8842451 tatctatgaagcacggacactcctcggattaggc 8842418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 9624687 - 9624642
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| |||||||||| ||||| ||||||||||||| ||||    
T  9624687 tataattacattgaattatgtgattttctcaaattattagcagtgt 9624642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 9800096 - 9800047
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| ||| |||||||| ||||||||| ||||| ||||||||||||    
T  9800096 caccgacacttacaattacacggaattatgtaattttctcaaattattag 9800047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 11313813 - 11313858
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  11313813 tataattacactaaattatgtgattttctcaaattattagcagtgt 11313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 14832143 - 14832102
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||||||| ||| |||||| ||||||||||||||||||||||    
T  14832143 taattacattgagttatgtgattttttcaaattattagctgt 14832102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 23870572 - 23870617
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| |||||||||||| | ||||||||||||||||||| ||||    
T  23870572 tataatcacactgaattatatgattttttcaaattattagcggtgt 23870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 25326479 - 25326426
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||| |||||||||||| |||||| | ||||||| ||||||||| |||||||    
T  25326479 cgacatctataattacactaaattatattatttttttaaattattatctgtgtt 25326426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 25775565 - 25775516
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatt-ttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||||||||    
T  25775565 caccgacacttgtaattacactgaattatgtgattattttcaaattatta 25775516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 34189469 - 34189428
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||    
T  34189469 attacactgaaatatgtcattttctcaaattattatctgtgt 34189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 3610677 - 3610633
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||||| |||||| ||||||| ||||||||| |||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgtt 3610633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 8593193 - 8593137
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt-caaattattagctgtgt 204  Q
    |||||||| || |||||| |||||||||||| ||||||| ||||||| |||||||||    
T  8593193 caccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgt 8593137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 11610561 - 11610521
Alignment:
Q  165 tacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||||||||| ||||||| ||||||||||| |||||    
T  11610561 tacactgaattatgtgatttttttaaattattagcggtgtt 11610521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 14747606 - 14747562
Alignment:
Q  161 taattacactgaattatgtcatttttt-caaattattagctgtgt 204  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||    
T  14747606 taattacactaaattatgtgatttttttcaaattattagctgtgt 14747562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 16789068 - 16789020
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| ||| |||||||||||||||||||| | ||||||| |||||||||    
T  16789068 caccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 20503586 - 20503554
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  20503586 atctatgaagcacggacactcctcggattaggc 20503554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 25064954 - 25064910
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| |||||||| |||||||||||| |||||| ||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgt 25064910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 27277852 - 27277896
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgt 27277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 39002084 - 39002044
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaatt 193  Q
    ||||| |||||||||| |||||||||| |||||||||||||    
T  39002084 gacatatataattacattgaattatgtgattttttcaaatt 39002044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 40993338 - 40993394
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| | |||||| ||||||||||| ||||    
T  40993338 caccgacacatataattacactgaattatgtgattttttttaaattattagcggtgt 40993394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 49505167 - 49505207
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
T  49505167 tataattacactaaattatgtgattttctcaaattattagc 49505207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 70334 - 70279
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  70334 caccgacacttataattacactgaattatgttattttttcaaattattaactgtgt 70279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 24339698 - 24339643
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  24339698 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 24339643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 19992057 - 19992002
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  19992057 caccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgt 19992002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 25481946 - 25481903
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgt 25481903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 201
Target Start/End: Original strand, 26033465 - 26033516
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctg 201  Q
    ||||||| || ||||||||||||||||||| |||||||||||||||||||||    
T  26033465 accgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 5409839 - 5409892
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||||||| || ||||| ||||||||||||| ||||||||||||||||||||||    
T  5409839 caccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgt 5409892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 32094023 - 32094080
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgtt 205  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  32094023 caccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgtt 32094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 11665446 - 11665498
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||||| |||||    
T  11665446 cgacacttataattagactgaattatgtgattttttcaaattattagttgtgt 11665498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 13770744 - 13770692
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || ||||||||||||||||||| ||||||| ||||||||||||||||    
T  13770744 cgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgt 13770692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3991380 - 3991325
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| |||||||||||| |||||||||||||||||| |||||    
T  3991380 caccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgt 3991325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 7438762 - 7438707
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||||| ||||||    
T  7438762 caccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgt 7438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 9778556 - 9778501
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| |||||||||||| ||||||||||||||| ||||||||    
T  9778556 caccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgt 9778501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 11061079 - 11061134
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| ||| |||||||| ||||||||||||||||||||||||    
T  11061079 caccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgt 11061134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 21880208 - 21880158
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||| || ||||||||||||||||||| ||||| |||||||||||||    
T  21880208 caccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 18233611 - 18233656
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||    
T  18233611 tataattacactgaattatgtcattttctcaaattactatctgtgt 18233656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 24105732 - 24105679
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| || |||||||||||||| |||  ||||||||||||||||||||||||    
T  24105732 ccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgt 24105679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 27945097 - 27945048
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| || ||||||||||||||||||| ||||| ||||||||||||    
T  27945097 caccgacacttgtaattacactgaattatgtaattttctcaaattattag 27945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 43250046 - 43250001
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattatta 43250001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 9408337 - 9408385
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||    
T  9408337 caccgacacttgtaattacactaaattatgtgattttttcaaattatta 9408385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 18215189 - 18215241
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctg 201  Q
    |||||||| || ||| ||||||| ||||||| |||||||||||||||||||||    
T  18215189 caccgacacttgtaactacactgcattatgtgattttttcaaattattagctg 18215241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 29787383 - 29787427
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgt 29787427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 43027472 - 43027524
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctg 201  Q
    |||||||| || || |||||||| ||||||| |||||||||||||||||||||    
T  43027472 caccgacacttgtatttacactgcattatgtgattttttcaaattattagctg 43027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 199
Target Start/End: Complemental strand, 2424659 - 2424620
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 8234186 - 8234147
Alignment:
Q  165 tacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  8234186 tacactgaattatgttattttttcaaattattagttgtgt 8234147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 15680865 - 15680814
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| ||||||||||||| |||||||| |||||||  |||||||||||    
T  15680865 caccgacacttataattacactaaattatgtgattttttttaattattagct 15680814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 18013087 - 18013126
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  18013087 tataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 20549847 - 20549792
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  |||||||||||||||||| || ||||| ||||||||||||| ||||    
T  20549847 caccgacacatataattacactgaattacgtgattttctcaaattattagcggtgt 20549792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 28155626 - 28155571
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  28155626 caccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgt 28155571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 35862016 - 35861965
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||| ||||||| |||||||||| |||||||||||||||||| |||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattattagttgtgt 35861965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 1401081 - 1401031
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||||| | |||||||||||||||||||||| | ||| |||||||||||||    
T  1401081 caccgatacttataattacactgaattatgtgagtttctcaaattattagc 1401031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 7328694 - 7328744
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||  |||||||||||| |||||||| ||||| |||||||||||||    
T  7328694 caccgacacatataattacactaaattatgttattttctcaaattattagc 7328744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 8056957 - 8057002
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  8056957 ttataattacactgaattatgtaatttttt-aaattattaactgtgt 8057002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 12278881 - 12278843
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  12278881 tataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 30813856 - 30813818
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 32308163 - 32308121
Alignment:
Q  162 aattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgt 32308121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 5835303 - 5835254
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||| ||||||    
T  5835303 caccgacacatataattacactgaattatgttattttctcaaactattag 5835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Original strand, 7133295 - 7133336
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  7133295 attacactgaattatgtcattttctcaaattatcatctgtgt 7133336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 10230079 - 10230124
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||| |||| |||||||||||||||||||||  |||||||||||    
T  10230079 cgacatctatacttacactgaattatgtcatttcctcaaattatta 10230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 11890933 - 11890970
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||| | |||||||||||||||||    
T  11890933 ataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 13300454 - 13300417
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  13300454 taattacactgaattatatgattttttcaaattattag 13300417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 18039055 - 18039006
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattatta 197  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||    
T  18039055 caccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 19930954 - 19930991
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  19930954 tataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 42720903 - 42720948
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| | |||||||| ||||||||||||||||||| ||||    
T  42720903 tataattacatttaattatgtgattttttcaaattattagcggtgt 42720948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 6028681 - 6028633
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||| |||||||| | |||||||| || ||||||||||||||    
T  6028681 caccgacatttgtaattacattaaattatgttatattttcaaattatta 6028633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 13427629 - 13427585
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||    
T  13427629 cgacatctatgattatactaaattatgtcattttttcaaattatt 13427585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 15902878 - 15902830
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  |||||||||||| |||||||| ||||| |||||||||||    
T  15902878 caccgacacatataattacactaaattatgtgattttatcaaattatta 15902830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 17851477 - 17851437
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||||||||| ||||| | |||||||||||    
T  17851477 tataattacactgaattatgtgattttctaaaattattagc 17851437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 27980841 - 27980805
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattatt 196  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  27980841 ataattacattgaattatgtcattttttaaaattatt 27980805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 39138500 - 39138464
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttt 185  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  39138500 caccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 7977833 - 7977888
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  7977833 caccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgt 7977888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 16766753 - 16766698
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  16766753 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 16766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 28715351 - 28715296
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| ||||    
T  28715351 caccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgt 28715296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 10770677 - 10770733
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||| ||||||    
T  10770677 caccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtt 10770733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 5970111 - 5970166
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  5970111 cacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgt 5970166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 7938172 - 7938117
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||||||||||| |||||| | ||||||||||||||||||||||||    
T  7938172 caccgacacttataattacactaaattatatgattttttcaaattattagctgtgt 7938117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 9107373 - 9107428
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||| ||| ||||||||||||||||||||||||    
T  9107373 caccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgt 9107428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 12696368 - 12696325
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgt 12696325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 34595190 - 34595135
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||| |||||    
T  34595190 caccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgt 34595135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 7265596 - 7265652
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  7265596 caccgacacatataattacactgaattatgtgattttctcaaattattagcggtgtt 7265652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 31959213 - 31959161
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtg 203  Q
    |||||| || ||||||||||| ||||||| |||||||||||||||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtg 31959161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 7801159 - 7801214
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||| |||||    
T  7801159 caccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgt 7801214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 9025497 - 9025552
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  9025497 caccgacacatataattacactgaattatgtgattttctcaaattattagcagtgt 9025552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 16833364 - 16833309
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||| ||||| |||||||||||||||||| |||||    
T  16833364 caccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgt 16833309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 17841604 - 17841647
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgt 17841647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 7569181 - 7569227
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  7569181 tataattacactgaattatgtaattttctcaaattattatctgtgtt 7569227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 16388245 - 16388283
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  16388245 ttataattacactgaattatgtgattttttcaaattatt 16388283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 1532286 - 1532241
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  1532286 tataattacactgaattatgtaattttatcaaattattagcggtgt 1532241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 9195757 - 9195806
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  |||||||||||| |||||||||||||| ||||||||||||    
T  9195757 caccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 9522947 - 9522898
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| || ||||||||||||||||||| ||||||| ||||||||||    
T  9522947 caccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 19040398 - 19040353
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  19040398 tataattacactgaattatgtgattttctcaaattattagcggtgt 19040353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 198
Target Start/End: Complemental strand, 31384964 - 31384927
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31384964 taattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 1191706 - 1191758
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || ||||||||||||||| ||| | ||||||||||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgt 1191758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 1681811 - 1681759
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || |||||||||||||||| || |||||||||||||||||| |||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgt 1681759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 8714036 - 8713980
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||| |||||| ||||||||||||||||||| | |||||||||||||||| ||||||    
T  8714036 cacccacatttgtaattacactgaattatgtgatttttttcaaattattaactgtgt 8713980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 9911531 - 9911587
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattt-tttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |||| ||| ||||||||||||||||    
T  9911531 caccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 34225823 - 34225867
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||||  |||||||||||||||||| |||||    
T  34225823 ataattacactgaattatgcgattttttcaaattattagttgtgt 34225867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 426517 - 426572
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| | |||||||| ||||||||||||||||| ||||||    
T  426517 caccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgt 426572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 853862 - 853917
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||| |||| |||||||| |||||||||||||||||| |||||    
T  853862 caccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgt 853917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3398674 - 3398620
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| | |||||||||||||||||||| | |||||| |||||||||||||||||    
T  3398674 caccgatacttataattacactgaattatatgattttt-caaattattagctgtgt 3398620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 7151458 - 7151419
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  7151458 tataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8365522 - 8365577
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||| ||||||||| || ||||||||||||||| |||||    
T  8365522 caccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgt 8365577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 8776988 - 8777031
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||| ||| |||||||||||||||||| |||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgt 8777031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 9658935 - 9658880
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||||||| ||||| | ||||||||||| ||||    
T  9658935 caccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgt 9658880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 15489735 - 15489790
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||| |||||| ||| |||||||||||||||||| |||||    
T  15489735 caccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgt 15489790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 200
Target Start/End: Complemental strand, 17435243 - 17435204
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagct 200  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  17435243 taattacactgaattatgtaattttttaaaattattagct 17435204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 25010225 - 25010260
Alignment:
Q  169 ctgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25010225 ctgaattatgtgattttttcaaattattagctgtgt 25010260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 25038075 - 25038122
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||||    
T  25038075 accgacatttgtaattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 28152154 - 28152104
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| || ||||||||||||||||||| | ||||||||||||||||||    
T  28152154 caccgacacttgtaattacactgaattatgtga-tttttcaaattattagct 28152104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 32511669 - 32511724
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||| |||||||||||||||||||||| ||||| | ||||||||||| ||||    
T  32511669 caccaacacttataattacactgaattatgtgattttcttaaattattagcggtgt 32511724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 33001292 - 33001347
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  |||||||||| | |||||||| ||||||||||||||||||| ||||    
T  33001292 caccgacacatataattacatttaattatgtgattttttcaaattattagcagtgt 33001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 33468389 - 33468440
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| |||||||||| ||||||| || ||||||||||||||||||| ||||    
T  33468389 gacatatataattacattgaattaagttattttttcaaattattagcggtgt 33468440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 1700408 - 1700362
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattat 195  Q
    |||||||| |||||||||||||||| ||||| ||||||| |||||||    
T  1700408 caccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 2117129 - 2117083
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||| |||||||| || |||||||||| ||||||||||||||||||    
T  2117129 cgacacttataattgcattgaattatgtgattttttcaaattattag 2117083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 7086851 - 7086801
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||  |||||||||||| |||||||| ||||| |||||||||||||    
T  7086851 caccgacacatataattacactaaattatgtgattttctcaaattattagc 7086801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Complemental strand, 17168940 - 17168902
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  17168940 tatagttacattgaattatgtcattttttcaaattatta 17168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 30866157 - 30866203
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||||| |||||||||| ||||| ||||||||||||| |||||    
T  30866157 tataattacattgaattatgtgattttctcaaattattagcggtgtt 30866203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 34446607 - 34446573
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||||| |||||||||||    
T  34446607 attacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 2224275 - 2224230
Alignment:
Q  156 atttataattacactgaattatgtcattttttcaaattattagctg 201  Q
    |||| ||||||||||||||||| | ||||||| |||||||||||||    
T  2224275 atttgtaattacactgaattatatgatttttttaaattattagctg 2224230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 6898284 - 6898333
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||||| || |||||||||| |||||||| |||| |||||||||||||    
T  6898284 caccgacacttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 7973710 - 7973665
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaatta 194  Q
    |||||||| ||||||||||||| |||||||| ||||||| ||||||    
T  7973710 caccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 7996391 - 7996436
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| | ||||| ||||||||||||| ||||    
T  7996391 tataattacactgaattatatgattttctcaaattattagcagtgt 7996436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 8022410 - 8022365
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| | ||||| ||||||||||||| ||||    
T  8022410 tataattacactgaattatatgattttctcaaattattagcagtgt 8022365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 8931615 - 8931660
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||| ||||| ||||||| ||||||||||    
T  8931615 tataattatactgaattatgttattttctcaaatttttagctgtgt 8931660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 204
Target Start/End: Complemental strand, 10842574 - 10842533
Alignment:
Q  163 attacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||| ||||||||||||||||||| ||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgt 10842533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 13851782 - 13851737
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| || ||||| ||||||||||||| ||||    
T  13851782 tataattacactgaattacgttattttctcaaattattagcggtgt 13851737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 196
Target Start/End: Original strand, 26314639 - 26314684
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattatt 196  Q
    ||||||| |||||||||| |||||||| | ||||||||||||||||    
T  26314639 ccgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 26562735 - 26562690
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  26562735 tataattacactgaattatgtgattttctcaaatttttagcagtgt 26562690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 31429006 - 31429059
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctg 201  Q
    |||| |||||| ||||||||||||||||||| | |||||| |||||||||||||    
T  31429006 cacctacatttgtaattacactgaattatgtgattttttttaaattattagctg 31429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 31579239 - 31579276
Alignment:
Q  160 ataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 403867 - 403915
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| || || ||||||| |||||||| |||||||||||||||||    
T  403867 caccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3209438 - 3209382
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt-caaattattagctgtgt 204  Q
    |||||||| || |||| ||||| |||||||| ||||||| |||||||||||||||||    
T  3209438 caccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgt 3209382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 4877999 - 4877943
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||||||| || |||||| ||| |||||||| | |||||||||||||||||||||||    
T  4877999 caccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgt 4877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 6349752 - 6349788
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| |||||||||| |||||||||||||||||    
T  6349752 taattacaatgaattatgtaattttttcaaattatta 6349788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 9617490 - 9617442
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  |||||||||| |||||||||| ||||| |||||||||||    
T  9617490 caccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 11784219 - 11784267
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||| |||||||||||||| | |||| ||||| |||||||||||    
T  11784219 caccgacatatataattacactgattcatgtgattttctcaaattatta 11784267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 18252766 - 18252802
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||| |||||||||||||||| |||||||||    
T  18252766 taattacactaaattatgtcatttttttaaattatta 18252802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 21395311 - 21395366
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| || |||||||||| |||||||| ||||| ||||||||||||| |||||    
T  21395311 caccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgtt 21395366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 24645537 - 24645481
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt-caaattattagctgtgt 204  Q
    |||||||| || ||| || |||||||||||| ||||||| |||||||||||||||||    
T  24645537 caccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgt 24645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 32978902 - 32978958
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttt-ttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| ||||||||  |||| |||||||||||||||||||    
T  32978902 caccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgt 32978958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 34073360 - 34073400
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagc 199  Q
    ||||||||||||||||||||  ||||| |||||||||||||    
T  34073360 tataattacactgaattatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 21191059 - 21191114
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||    
T  21191059 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21191114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 205
Target Start/End: Original strand, 24906305 - 24906360
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgtt 24906360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 41633791 - 41633736
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  41633791 caccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgt 41633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 21576751 - 21576804
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||    
T  21576751 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtt 21576804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 6247678 - 6247623
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||| |||||    
T  6247678 caccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgt 6247623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 7677761 - 7677706
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||| ||||||||||||| ||||||||||||||||||||||||    
T  7677761 caccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgt 7677706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21522806 - 21522751
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||    
T  21522806 caccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgt 21522751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21533372 - 21533317
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| ||||||| ||||||||||||||||    
T  21533372 caccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgt 21533317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 39698585 - 39698542
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgt 39698542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 42893416 - 42893361
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||| ||||||| ||||||||||||||||||||||||    
T  42893416 caccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgt 42893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 14674323 - 14674270
Alignment:
Q  151 ccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| || |||||||||| |||||||| ||||||||||||||||||||||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgt 14674270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 40131677 - 40131628
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  40131677 caccgatatttataattaaactgaattatgtgattttttcaaattattag 40131628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 31084376 - 31084324
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| || |||||||| |||||||||| ||||||||||||||||||||||||    
T  31084376 cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgt 31084324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 8420083 - 8420032
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    |||||||| || |||||||| |||||||||| ||||||||||||||||||||    
T  8420083 caccgacacttgtaattacattgaattatgttattttttcaaattattagct 8420032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 13287402 - 13287457
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || || |||||||||||||||| ||||||||||||||||| ||||||    
T  13287402 caccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgt 13287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 43001844 - 43001801
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgt 43001801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 197
Target Start/End: Complemental strand, 4344784 - 4344750
Alignment:
Q  163 attacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||||||||||||||||||    
T  4344784 attacactgaattatgtcattttttcaaattatta 4344750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 22013461 - 22013415
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||| |||||||| |||||| |||||||||||||||||    
T  22013461 ttataattacactaaattatgtaatttttccaaattattagctgtgt 22013415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 38749576 - 38749614
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  38749576 tataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 6471902 - 6471947
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||    
T  6471902 tataattacactgaattatgtgattttctcaaattattagccgtgt 6471947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 31264491 - 31264446
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||| ||||||||||||||||||||||| |||||||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 17177026 - 17177082
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| || |||||||| |||||| | | |||||||||||||||||||||||||    
T  17177026 caccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgtt 17177082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 27932284 - 27932236
Alignment:
Q  156 atttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  27932284 atttgtaattacactgaattatgtaattttctcaaattattagcggtgt 27932236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 28588677 - 28588725
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||  ||||||||||||||||||||| ||||| |||||||||||    
T  28588677 caccgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 30502391 - 30502447
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||  |||||||||||||||||| || ||||| ||||||||||||| |||||    
T  30502391 caccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30502447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 30542734 - 30542790
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    ||||||||  |||||||||||||||||| || ||||| ||||||||||||| |||||    
T  30542734 caccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtt 30542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3966559 - 3966504
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  3966559 caccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgt 3966504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 19579757 - 19579702
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||| |||| |||||||| ||||| ||||||||||||||||||    
T  19579757 caccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgt 19579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 21351908 - 21351963
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| | |||||| ||||||||| |||||    
T  21351908 caccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgt 21351963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 21542086 - 21542031
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| || |||| |||||||||| |||||    
T  21542086 caccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgt 21542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 30098381 - 30098334
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| |||||||||| |||||||||| ||||| |||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 36642765 - 36642820
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| ||||| ||||||| || ||||||| ||||||||||||||| ||||||    
T  36642765 caccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgt 36642820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 36838599 - 36838544
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  |||||||||||| |||||||| ||||| ||||||||||||| ||||    
T  36838599 caccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 5467991 - 5468029
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  5467991 tataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 200
Target Start/End: Original strand, 7218271 - 7218321
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagct 200  Q
    ||||||| || ||||||||||||||||||| |||| || ||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgatttatttaaattattagct 7218321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 17593725 - 17593775
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagc 199  Q
    |||| |||| |||||||||||||||||| || ||||| |||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 149
Target Start/End: Original strand, 21194063 - 21194093
Alignment:
Q  119 ctataaagcacggacactcctcggattaggc 149  Q
    |||||||||||||||||||||||||||||||    
T  21194063 ctataaagcacggacactcctcggattaggc 21194093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 43564937 - 43564891
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattat 195  Q
    |||||||| ||||||||||||| |||||||| |||||| ||||||||    
T  43564937 caccgacacttataattacactaaattatgtgatttttccaaattat 43564891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 7997172 - 7997217
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||| |||||||||||||| ||||| ||||||| |||||||||||    
T  7997172 cgacacttataattacactgtattatatcattttctcaaattatta 7997217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 14422949 - 14422907
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgt 202  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||    
T  14422949 ttataattacactgaattatgtgattttt--aaattattagctgt 14422907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 22423815 - 22423864
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||| |||||||| | |||||||||| ||||| ||||||||||||    
T  22423815 caccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 24273043 - 24273088
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| |||||||| || ||||||    
T  24273043 tataattacactgaattatgtgattttctcaaattaataactgtgt 24273088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 24389171 - 24389126
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| |||||||| || ||||||    
T  24389171 tataattacactgaattatgtgattttctcaaattaataactgtgt 24389126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 41091270 - 41091315
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||||| ||||| |||||| |||||| ||||    
T  41091270 tataattacactgaattatgtgattttctcaaatcattagcagtgt 41091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 131807 - 131760
Alignment:
Q  161 taattacactgaattat--gtcattttttcaaattattagctgtgttc 206  Q
    |||||||||| ||||||  || ||||||||||||||||||||||||||    
T  131807 taattacacttaattatatgtgattttttcaaattattagctgtgttc 131760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 2548443 - 2548395
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| |||| ||||||||||||||||| ||||| || ||||||||    
T  2548443 caccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 15884044 - 15883988
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||||||| | |||||| |||||||| |||||||    
T  15884044 caccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgt 15883988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 22423762 - 22423794
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  22423762 atctatgaagcacggacactcctcggattaggc 22423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 30136678 - 30136722
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaatta 194  Q
    ||||||||||||||||||| ||||||| || ||||||| ||||||    
T  30136678 accgacatttataattacattgaattacgtaattttttaaaatta 30136722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 20216 - 20173
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgt 20173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 51855 - 51812
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgt 51812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 33378 - 33421
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgt 33421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 130 - 197
Target Start/End: Original strand, 192233 - 192300
Alignment:
Q  130 ggacactcctcggattaggcaccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||| |||||||| |||| || ||||||||| ||||||||| ||||| |||||||||||    
T  192233 ggacactcctcgggttaggcacagacacttgtaattacaccgaattatgtaattttctcaaattatta 192300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 178833 - 178877
Alignment:
Q  161 taattacactgaattatg-tcattttttcaaattattagctgtgt 204  Q
    |||||||||||||||||| | |||||||||||||||||| |||||    
T  178833 taattacactgaattatgatgattttttcaaattattagttgtgt 178877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 53238 - 53189
Alignment:
Q  147 ggcaccgacatttataattacactgaattatgtcattttttcaaattatt 196  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  53238 ggcaccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 130539 - 130483
Alignment:
Q  148 gcaccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| ||||| ||||||    
T  130539 gcaccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgt 130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 83216 - 83172
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaatt 193  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||    
T  83216 caccgacatttgtaattacactgaattatgtcatttttttaaatt 83172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 92851 - 92808
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgt 92808  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 123684 - 123625
Alignment:
Q  149 caccgacatttataattacactgaattatgtca---ttttttcaaattattagctgtgtt 205  Q
    |||||||| || ||||||||||||||||||| |   |||||| |||||||||||||||||    
T  123684 caccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgtt 123625  T

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Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 465 - 520
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  465 caccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgt 520  T

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Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 14574 - 14531
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| |||||||||||||||||| |||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgt 14531  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 17752 - 17807
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| |||||||| |||||||||||||||||| |||||    
T  17752 caccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgt 17807  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 241650 - 241595
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| | ||||||||||| |||||||| |||||| |||||||||||||||||    
T  241650 caccgacactcataattacactaaattatgtgatttttccaaattattagctgtgt 241595  T

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Target: scaffold1528 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 204
Target Start/End: Complemental strand, 1081 - 1036
Alignment:
Q  159 tataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||| |||||||||||||||| ||||||||||||||||||| ||||    
T  1081 tatagttacactgaattatgtaattttttcaaattattagcggtgt 1036  T

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Target: scaffold0126 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 19200 - 19153
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  19200 caccgacatttttaatcacactgaattatgtcatttttt-aaattatta 19153  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 63829 - 63773
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||||||| || ||||| ||||||||||||| ||||| ||||||||||||| |||||    
T  63829 caccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgtt 63773  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 263379 - 263431
Alignment:
Q  153 gacatttataattacactgaattatgtcattttttcaaattattagctgtgtt 205  Q
    |||| ||||||||||||||||||||||  |||| ||||||||||||| |||||    
T  263379 gacacttataattacactgaattatgtggttttctcaaattattagcagtgtt 263431  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 225274 - 225326
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||| ||||||||||| || ||||||||||||| ||||||||||| ||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgt 225326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 7047 - 7090
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||    
T  7047 taattatactaaattatgtaattttttcaaattattagctgtgt 7090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 8638 - 8693
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||| |||||| || ||||||||| || ||||||||||||||| |||||    
T  8638 caccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgt 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 23476 - 23421
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| |||||||||||||||||||||| |||||||  | |||||| ||||||    
T  23476 caccgacacttataattacactgaattatgtgatttttttgagttattatctgtgt 23421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 8854 - 8799
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||| || |||||||||| ||| || | ||||||||||||||||||||||||    
T  8854 caccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgt 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 23826 - 23771
Alignment:
Q  149 caccgacatttataattacactgaattatgtca-ttttttcaaattattagctgtg 203  Q
    |||||||| || ||||||||||||||||||| | |||||||||||||||| |||||    
T  23826 caccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 135315 - 135370
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||  ||||||||||| ||||||||| ||||| ||||||||||||| ||||    
T  135315 caccgacacatataattacacagaattatgtgattttctcaaattattagcagtgt 135370  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 7323 - 7369
Alignment:
Q  158 ttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    ||||||||||||| |||||||| |||||| ||||||||||| |||||    
T  7323 ttataattacactaaattatgtgatttttccaaattattagttgtgt 7369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 44529 - 44583
Alignment:
Q  150 accgacatttataattacactgaattatgtcattttttcaaattattagctgtgt 204  Q
    |||||||  ||||||||||||||||||||| ||||| ||||||| ||||| ||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatttttagcggtgt 44583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 174556 - 174594
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt 187  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  174556 caccgacatttgtaattacgctgaattatgtcatttttt 174594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 187
Target Start/End: Original strand, 180069 - 180107
Alignment:
Q  149 caccgacatttataattacactgaattatgtcatttttt 187  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  180069 caccgacatttgtaattacgctgaattatgtcatttttt 180107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 8071 - 8104
Alignment:
Q  164 ttacactgaattatgtcattttttcaaattatta 197  Q
    |||||||||||||||||||||| |||||||||||    
T  8071 ttacactgaattatgtcattttctcaaattatta 8104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 198
Target Start/End: Original strand, 9750 - 9799
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattattag 198  Q
    ||||||||  |||||||||||||||||| || ||||| ||||||||||||    
T  9750 caccgacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 90896 - 90851
Alignment:
Q  152 cgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||| ||||||||||||||||||| | ||||| |||||||||||    
T  90896 cgacatatataattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Original strand, 4819 - 4851
Alignment:
Q  117 atctataaagcacggacactcctcggattaggc 149  Q
    |||||| ||||||||||||||||||||||||||    
T  4819 atctatgaagcacggacactcctcggattaggc 4851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 4898 - 4942
Alignment:
Q  161 taattacactgaattatgtca-ttttttcaaattattagctgtgt 204  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||    
T  4898 taattacactgaattatgtgattttttttaaattattagctgtgt 4942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 25771 - 25819
Alignment:
Q  149 caccgacatttataattacactgaattatgtcattttttcaaattatta 197  Q
    |||||||| ||||||||||||| |||||||| ||||| || ||||||||    
T  25771 caccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 3864 - 3900
Alignment:
Q  161 taattacactgaattatgtcattttttcaaattatta 197  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  3864 taattacactgaattatgtgatttttttaaattatta 3900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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