View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12454_low_6 (Length: 412)

Name: NF12454_low_6
Description: NF12454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12454_low_6
NF12454_low_6
[»] chr3 (22 HSPs)
chr3 (99-404)||(12100239-12100552)
chr3 (258-375)||(24204984-24205102)
chr3 (258-366)||(3730111-3730217)
chr3 (258-366)||(25074796-25074911)
chr3 (317-404)||(12704659-12704746)
chr3 (272-366)||(21149074-21149169)
chr3 (272-366)||(25365469-25365564)
chr3 (258-305)||(34185055-34185102)
chr3 (258-375)||(15864831-15864948)
chr3 (258-304)||(52369857-52369903)
chr3 (258-327)||(27505299-27505367)
chr3 (258-353)||(40993278-40993373)
chr3 (258-301)||(49651719-49651762)
chr3 (258-304)||(4987223-4987269)
chr3 (311-365)||(35994734-35994788)
chr3 (258-304)||(40052382-40052428)
chr3 (258-304)||(55401145-55401191)
chr3 (320-353)||(1830364-1830397)
chr3 (262-303)||(3631755-3631796)
chr3 (258-303)||(20503536-20503581)
chr3 (258-306)||(16789588-16789636)
chr3 (317-353)||(25892481-25892517)
[»] chr1 (20 HSPs)
chr1 (258-366)||(22794021-22794130)
chr1 (269-365)||(18190062-18190159)
chr1 (258-308)||(42359392-42359442)
chr1 (263-353)||(21145488-21145574)
chr1 (258-308)||(16297224-16297274)
chr1 (322-381)||(40747780-40747840)
chr1 (258-365)||(1486647-1486760)
chr1 (258-305)||(10233325-10233372)
chr1 (268-365)||(40181879-40181977)
chr1 (258-304)||(113363-113409)
chr1 (315-353)||(6936400-6936438)
chr1 (258-304)||(9828125-9828171)
chr1 (258-353)||(20157287-20157388)
chr1 (258-304)||(40917830-40917876)
chr1 (256-404)||(11634064-11634215)
chr1 (258-298)||(7918157-7918197)
chr1 (258-353)||(11412710-11412806)
chr1 (258-353)||(18337350-18337445)
chr1 (258-306)||(21365995-21366043)
chr1 (311-365)||(36878469-36878525)
[»] chr7 (18 HSPs)
chr7 (269-353)||(12278856-12278940)
chr7 (258-304)||(32287406-32287452)
chr7 (258-301)||(24339726-24339769)
chr7 (258-304)||(5409774-5409820)
chr7 (258-327)||(9778553-9778621)
chr7 (258-366)||(23751907-23752015)
chr7 (258-307)||(35749954-35750003)
chr7 (317-379)||(29812666-29812729)
chr7 (260-327)||(43250051-43250118)
chr7 (258-304)||(598278-598324)
chr7 (258-304)||(6490786-6490832)
chr7 (258-304)||(17852070-17852116)
chr7 (258-304)||(43027407-43027453)
chr7 (258-365)||(20549799-20549907)
chr7 (317-353)||(17780086-17780122)
chr7 (321-353)||(18233604-18233636)
chr7 (317-353)||(23930240-23930276)
chr7 (259-303)||(40287306-40287350)
[»] chr6 (13 HSPs)
chr6 (257-353)||(12235461-12235557)
chr6 (258-309)||(9107302-9107353)
chr6 (258-305)||(31959219-31959266)
chr6 (258-304)||(8389411-8389457)
chr6 (258-365)||(34595142-34595250)
chr6 (258-365)||(28152107-28152214)
chr6 (258-366)||(34446572-34446687)
chr6 (258-304)||(8776911-8776957)
chr6 (283-380)||(13689161-13689259)
chr6 (258-304)||(9025448-9025494)
chr6 (317-366)||(12086347-12086397)
chr6 (317-366)||(17168465-17168515)
chr6 (286-353)||(4420149-4420217)
[»] chr5 (14 HSPs)
chr5 (258-366)||(18586232-18586340)
chr5 (281-366)||(7997132-7997218)
chr5 (258-365)||(21190999-21191107)
chr5 (281-353)||(21137710-21137786)
chr5 (258-303)||(38464316-38464361)
chr5 (284-353)||(26205723-26205798)
chr5 (257-305)||(39268540-39268588)
chr5 (258-304)||(2419937-2419983)
chr5 (317-366)||(5467980-5468030)
chr5 (258-304)||(14873592-14873638)
chr5 (263-304)||(17088361-17088402)
chr5 (258-303)||(19820331-19820376)
chr5 (317-365)||(31264446-31264495)
chr5 (315-366)||(18607097-18607149)
[»] chr8 (11 HSPs)
chr8 (258-366)||(30067971-30068080)
chr8 (258-366)||(39820436-39820544)
chr8 (258-304)||(29510236-29510282)
chr8 (261-308)||(40064028-40064075)
chr8 (321-366)||(14692467-14692512)
chr8 (258-327)||(44067574-44067643)
chr8 (258-353)||(1676733-1676828)
chr8 (258-305)||(22652056-22652103)
chr8 (258-365)||(3025559-3025667)
chr8 (258-327)||(16641912-16641980)
chr8 (258-314)||(16987973-16988029)
[»] scaffold0652 (1 HSPs)
scaffold0652 (258-365)||(405-513)
[»] chr4 (15 HSPs)
chr4 (258-375)||(24343505-24343629)
chr4 (258-321)||(53381533-53381596)
chr4 (258-366)||(18513178-18513293)
chr4 (269-353)||(39507073-39507157)
chr4 (258-304)||(3947704-3947750)
chr4 (258-304)||(23292929-23292975)
chr4 (258-298)||(40784029-40784069)
chr4 (317-375)||(20743280-20743339)
chr4 (257-304)||(28084594-28084641)
chr4 (258-304)||(19482749-19482795)
chr4 (317-366)||(31243550-31243600)
chr4 (258-303)||(715548-715593)
chr4 (258-303)||(752874-752919)
chr4 (258-326)||(17876214-17876282)
chr4 (317-353)||(30520438-30520474)
[»] chr2 (17 HSPs)
chr2 (258-303)||(18840956-18841001)
chr2 (259-365)||(37411188-37411295)
chr2 (317-379)||(25544475-25544538)
chr2 (258-366)||(34006933-34007043)
chr2 (258-304)||(37419824-37419870)
chr2 (258-303)||(2438662-2438707)
chr2 (317-353)||(11308006-11308042)
chr2 (258-321)||(10535688-10535751)
chr2 (258-305)||(44860400-44860447)
chr2 (258-304)||(15657945-15657991)
chr2 (257-303)||(21091794-21091840)
chr2 (258-304)||(26769592-26769638)
chr2 (258-304)||(38117102-38117148)
chr2 (318-366)||(10535762-10535811)
chr2 (255-308)||(17776664-17776717)
chr2 (258-303)||(18622673-18622718)
chr2 (311-366)||(12748691-12748747)
[»] scaffold0007 (1 HSPs)
scaffold0007 (258-327)||(225200-225269)
[»] scaffold0199 (1 HSPs)
scaffold0199 (258-353)||(1970-2065)
[»] scaffold0128 (1 HSPs)
scaffold0128 (258-305)||(32773-32820)
[»] scaffold0003 (1 HSPs)
scaffold0003 (258-304)||(241675-241721)
[»] scaffold0793 (1 HSPs)
scaffold0793 (258-303)||(4824-4869)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-122; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 99 - 404
Target Start/End: Complemental strand, 12100552 - 12100239
Alignment:
Q  99 atatatatttcaatgagatatggagaattaggggatgagttgcattaggtattgtcctaatttgaattttcagattttatgttaagatgaaaatacaatt 198  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12100552 atatatatttcaatgagatatgaagaattaggggatgagttgcattagctattgtcctaatttgaattttcagattttatgttaagatgaaaatacaatt 12100453  T
Q  199 tattggtgagttaatgttaggtcattacttaaaattaatagaatttag---------attcccgcctgtgaagcacgggcactcctcggactaggtgtgt 289  Q
    ||||||||||||||||||||||||||||||||||||  |||  |||           |||||||||||||||||||||||||||||||||||||||||||    
T  12100452 tattggtgagttaatgttaggtcattacttaaaattc-tagtgttttattttcacttattcccgcctgtgaagcacgggcactcctcggactaggtgtgt 12100354  T
Q  290 cccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcatttgtcaaattattatgcgagtcggtgtctggtgtcctt 389  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||    
T  12100353 cccggtgtcggacacgcgttagtgtcagacacgacacctattattacactgaattatatcatttgtcaaattattatgcgattcggtgtccggtgtcctt 12100254  T
Q  390 gtctatgtctgtgct 404  Q
     |||||||| |||||    
T  12100253 ttctatgtccgtgct 12100239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 24204984 - 24205102
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||||| ||||||||| | |||| |||||| |||||||||||| ||| |||||| |||||||||| ||| ||||||||| ||||||||| ||| ||    
T  24204984 tgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacacgacacttataattacactgtattatgtcattttctc 24205083  T
Q  357 aaattattatgcgagtcgg 375  Q
    |||||||||| || |||||    
T  24205084 aaattattatccgtgtcgg 24205102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 3730111 - 3730217
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcatt-tgtc 356  Q
    ||||||| || ||||||||||| ||||||||||||||||   ||||  | || |||||||||||||||||||| ||||||||||||||||||||| | ||    
T  3730111 tgaagcatggacactcctcggattaggtgtgtcccggtg---gacatgcattggtgtcagacacgacacctatgattacactgaattatgtcattatctc 3730207  T
Q  357 aaattattat 366  Q
    ||||||||||    
T  3730208 aaattattat 3730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 25074911 - 25074796
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgaca-----cctattattacactgaattatgtca- 350  Q
    |||||||||  ||||||||||| |||||||||||| ||||||||||| |||| |||||||||| |||||     ||||| |||||||| ||||||||||     
T  25074911 tgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacacgcgttggtgtcagacaccgacacaacgcctatgattacactcaattatgtcat 25074812  T
Q  351 tttgtcaaattattat 366  Q
    ||| ||||||||||||    
T  25074811 tttctcaaattattat 25074796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 404
Target Start/End: Original strand, 12704659 - 12704746
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcggtgtctggtgtccttgtctatgtctgtgct 404  Q
    |||||||||||||| |||||| |||||||||||| ||| |||||||||||| || ||  ||||| ||||||||||||| |||| |||||    
T  12704659 gacacgacacctatgattacattgaattatgtcattttttcaaattattatccgtgt-tgtgtccggtgtccttgtctgtgtccgtgct 12704746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 21149169 - 21149074
Alignment:
Q  272 tcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    |||||||| ||||||||| | |||||| |||||||||| ||||| |||| ||||| || | ||||||||||||||||||| ||| ||||||||||||    
T  21149169 tcctcggattaggtgtgttc-ggtgtcagacacacgttggtgtccgacaacgacatctttgattacactgaattatgtcattttctcaaattattat 21149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 25365564 - 25365469
Alignment:
Q  272 tcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcat-ttgtcaaattattat 366  Q
    ||||| || |||| |||||| ||||||| |||||| |  ||||| |||||||||| ||| ||||||| |||||||||||| || ||||||||||||    
T  25365564 tcctcagattaggcgtgtcctggtgtcgaacacacatcggtgtccgacacgacacttatgattacaccgaattatgtcatattctcaaattattat 25365469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 34185055 - 34185102
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||    
T  34185055 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggacaca 34185102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 15864948 - 15864831
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||||| ||||| | ||| |||| |||||||| |||| |||||  ||  ||||| |||||||||||||| |||||||| |||||| ||| ||| ||    
T  15864948 tgaagcacggacactctttggattaggcgtgtcccg-tgtcagacacgtgtcggtgtccgacacgacacctatgattacactaaattatatcattttttc 15864850  T
Q  357 aaattattatgcgagtcgg 375  Q
    |||||||||| || |||||    
T  15864849 aaattattatccgtgtcgg 15864831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 52369903 - 52369857
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||    
T  52369903 tgaagcacggacactcctcggaataggtgtgtcccggtgttggacac 52369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 27505367 - 27505299
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||||| ||||||||||| ||||  ||||||||||||||||||  | | |||||||||||||||||    
T  27505367 tgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtg-tcgtgtcagacacgacacc 27505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 40993278 - 40993373
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtcattt 353  Q
    ||||||| || ||||||||||| |||| ||||||||||||||||||   | | ||||| |||| |||||| ||| ||||||||||||||||| ||||    
T  40993278 tgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtg-tcgtgtccgacaccgacacatataattacactgaattatgtgattt 40993373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 49651719 - 49651762
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcgga 301  Q
    |||||||||| |||| |||||| |||||||||||||||||||||    
T  49651719 tgaagcacggacacttctcggattaggtgtgtcccggtgtcgga 49651762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 4987223 - 4987269
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    ||||| |||| ||||||||||| |||| |||||||||||||||||||    
T  4987223 tgaagtacggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 35994734 - 35994788
Alignment:
Q  311 gtgtcagacacgacacctattattacactgaattatgtcatttgtcaaattatta 365  Q
    ||||| |||||||||| | | ||||||||||||||||| |||| |||||||||||    
T  35994734 gtgtccgacacgacacttgtaattacactgaattatgtgatttttcaaattatta 35994788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 40052428 - 40052382
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||  ||||||||||| |||| |||||||||||||||||||    
T  40052428 tgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 55401191 - 55401145
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||||||    
T  55401191 tgaagcacggacactcctcggattaggcgtgtctcggtgtcggacac 55401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 353
Target Start/End: Complemental strand, 1830397 - 1830364
Alignment:
Q  320 acgacacctattattacactgaattatgtcattt 353  Q
    ||||||||||| ||||||||||||||||||||||    
T  1830397 acgacacctatgattacactgaattatgtcattt 1830364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 303
Target Start/End: Complemental strand, 3631796 - 3631755
Alignment:
Q  262 gcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||| |||||||||||||||| |||||| |||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggaca 3631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 20503581 - 20503536
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||| ||||||||||||| ||||    
T  20503581 tgaagcacggacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 16789588 - 16789636
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacac 306  Q
    ||||||| || ||||||| ||| ||||||||||||| ||||||||||||    
T  16789588 tgaagcatggacactcctaggattaggtgtgtcccgttgtcggacacac 16789636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 25892517 - 25892481
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  25892517 gacacgacacctatgattacactgaattatatcattt 25892481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 22794021 - 22794130
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||||  ||||||||| | |||||||||||||| ||||||||  ||| |||||| |||||||||||||| ||||||||| ||||||||| ||| ||    
T  22794021 tgaagcacgtacactcctcgaattaggtgtgtcccggagtcggacatgcgtcagtgtcggacacgacacctataattacactgtattatgtcattttttc 22794120  T
Q  357 aaattattat 366  Q
    ||||||||||    
T  22794121 aaattattat 22794130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 365
Target Start/End: Original strand, 18190062 - 18190159
Alignment:
Q  269 cactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgtcaaattatta 365  Q
    ||||||||||| ||||||||||||||||||||||||  ||| ||||| |||| |||||| | | ||||||||||||||||| | ||| |||||||||||    
T  18190062 cactcctcggattaggtgtgtcccggtgtcggacacgtgtt-gtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 42359392 - 42359442
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgt 308  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  42359392 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgt 42359442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 353
Target Start/End: Complemental strand, 21145574 - 21145488
Alignment:
Q  263 cacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    ||||| |||||||| || |||||| ||| ||||||||||||||||| |    | |||||||| ||||| ||||||||||||||||||||||    
T  21145574 cacggacactcctcagattaggtgcgtctcggtgtcggacacacgtca----ccgacacgacgcctatgattacactgaattatgtcattt 21145488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 16297224 - 16297274
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgt 308  Q
    |||||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  16297224 tgaagcacggacactcctcggattaggcgtgtcctggtgtcggacacacgt 16297274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 40747780 - 40747840
Alignment:
Q  322 gacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcggtgtctg 381  Q
    ||||||||| |||||| |||||||||||| ||| |||||||||||| || |||||||||||    
T  40747780 gacacctataattacattgaattatgtcattttctcaaattattatccgtgtcggtgtctg 40747840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 1486647 - 1486760
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc------tattattacactgaattatgtca- 350  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||  | | ||||| |||||||||||      ||| ||||||||||||||||| |     
T  1486647 tgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtg-tcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  351 tttgtcaaattatta 365  Q
    ||| |||||||||||    
T  1486746 tttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 10233372 - 10233325
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||||| |||||||| || ||||||||||| |||||||||||||    
T  10233372 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 10233325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 268 - 365
Target Start/End: Complemental strand, 40181977 - 40181879
Alignment:
Q  268 gcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgtcaaattatta 365  Q
    |||||||||||| |||| |||||||||||| ||||||  ||| ||||| |||| ||| || ||| ||||||||||||||||| | ||| |||||||||||    
T  40181977 gcactcctcggattaggcgtgtcccggtgtaggacacgtgtt-gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 113409 - 113363
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    ||||||| |||||||||||||| |||| |||||||||||| ||||||    
T  113409 tgaagcatgggcactcctcggattaggcgtgtcccggtgttggacac 113363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 353
Target Start/End: Original strand, 6936400 - 6936438
Alignment:
Q  315 cagacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  6936400 cagacacgacacctatgattacacttaattatgtcattt 6936438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 9828171 - 9828125
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||  |||||||||||||||||||    
T  9828171 tgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 20157287 - 20157388
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc------tattattacactgaattatgtcat 351  Q
    ||||||||||  |||||||  | |||||||||| ||||||||||||| |||  ||||| |||||||||||      ||| ||||||||||||||||| ||    
T  20157287 tgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacacgcgtcggtgtcggacacgacaccgacacatatgattacactgaattatgtgat 20157386  T
Q  352 tt 353  Q
    ||    
T  20157387 tt 20157388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 40917876 - 40917830
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| || |||||||| |||| |||||||||||||||||||    
T  40917876 tgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 404
Target Start/End: Original strand, 11634064 - 11634215
Alignment:
Q  256 tgtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtca--gacacgacacctattattacactgaattatg-tcatt 352  Q
    |||||||||||| ||||| ||||| | ||||||||| |||||||||||| || ||  | ||   ||||||||||||| |||||| | ||||||| |  ||    
T  11634064 tgtgaagcacggacactcttcggatttggtgtgtcctggtgtcggacacgcg-taccgacactcacacgacacctatgattacattaaattatgttgttt 11634162  T
Q  353 tgtcaaattattatgc-gagtcggtgtctggtgtccttgtctatgtctgtgct 404  Q
    | |||||||||||| | | ||||||||| ||||||| ||||  ||||||||||    
T  11634163 tctcaaattattatccggtgtcggtgtccggtgtccgtgtcggtgtctgtgct 11634215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 7918157 - 7918197
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtc 298  Q
    |||||||||| ||||||||||| ||||||||||| ||||||    
T  7918157 tgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 11412710 - 11412806
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac-gacacctattattacactgaattatgtcattt 353  Q
    |||||||||| ||||||| |||  |||  |||||  |||||||||||| ||| |||||  |||| ||||||||| || ||| |||||||||||||||    
T  11412710 tgaagcacggacactcctaggataaggcatgtcctagtgtcggacacatgttggtgtccaacaccgacacctatgatcacattgaattatgtcattt 11412806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 18337445 - 18337350
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtcattt 353  Q
    |||||||||| |||||||||||  |||  |||||| |||||||||||  ||| ||||| |||| |||||| | | ||||||||||||||||| ||||    
T  18337445 tgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgtt-gtgtccgacaccgacacttgtaattacactgaattatgtgattt 18337350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 21365995 - 21366043
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacac 306  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||| ||||    
T  21365995 tgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacac 21366043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 36878525 - 36878469
Alignment:
Q  311 gtgtcagacac-gacacctattattacactgaattatgtca-tttgtcaaattatta 365  Q
    ||||||||||| ||||||||| ||||||||||||||||| | ||| |||||||||||    
T  36878525 gtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 353
Target Start/End: Complemental strand, 12278940 - 12278856
Alignment:
Q  269 cactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    ||||||| ||| |||||||||||||||||| ||||| |||| ||||| |||||||||| ||| ||||||||||||||||||||||    
T  12278940 cactcctaggattaggtgtgtcccggtgtcagacacgcgttggtgtccgacacgacacatataattacactgaattatgtcattt 12278856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 32287406 - 32287452
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  32287406 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 32287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 24339769 - 24339726
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcgga 301  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  24339769 tgaagcacgggcactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 5409774 - 5409820
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  5409774 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 5409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 9778621 - 9778553
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||||| ||||||| ||| |||| |||||||||||||||||||  ||| ||||| |||||||||||    
T  9778621 tgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtt-gtgtccgacacgacacc 9778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 23752015 - 23751907
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||| | ||||  ||||| |||| |||||||| |||| ||||| |||  ||||| |||||||||||||| |||||||| |||||| ||| ||| ||    
T  23752015 tgaagcacagacacttatcggattaggcgtgtcccg-tgtctgacacgcgtcggtgtccgacacgacacctatgattacactaaattatatcattttatc 23751917  T
Q  357 aaattattat 366  Q
    ||||||||||    
T  23751916 aaattattat 23751907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 35750003 - 35749954
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacg 307  Q
    |||||||| | |||||||| |||||||||||||||||| |||||||||||    
T  35750003 tgaagcacagacactcctccgactaggtgtgtcccggtttcggacacacg 35749954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 29812666 - 29812729
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcggtgtc 379  Q
    |||||||||||||| |||||||| |||||| ||| ||| |||||||||||| || |||||||||    
T  29812666 gacacgacacctatgattacactaaattatatcattttctcaaattattatacgggtcggtgtc 29812729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 327
Target Start/End: Complemental strand, 43250118 - 43250051
Alignment:
Q  260 aagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||| ||||||||| | |||| |||||| |||||||||||| ||| |||||| ||| |||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcgtcagtgtccgacgcgacacc 43250051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 598324 - 598278
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||    
T  598324 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 6490832 - 6490786
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| || | |||||||||||||||||||    
T  6490832 tgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 17852116 - 17852070
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||| | |||||||||| |||||||||||||    
T  17852116 tgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacac 17852070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 43027407 - 43027453
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||| ||||| |||| |||||||||||||||||||    
T  43027407 tgaagcacggacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 20549907 - 20549799
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgt 355  Q
    |||||||||||||||||||||| |||| ||||| |  |||||||||   ||| ||||| |||| |||||| ||| |||||||||||||| || | ||| |    
T  20549907 tgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgtt-gtgtccgacaccgacacatataattacactgaattacgtgattttct 20549809  T
Q  356 caaattatta 365  Q
    ||||||||||    
T  20549808 caaattatta 20549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 17780086 - 17780122
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||||||||||  ||||||||||||||    
T  17780086 gacacgacacctattattacatagaattatgtcattt 17780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 18233604 - 18233636
Alignment:
Q  321 cgacacctattattacactgaattatgtcattt 353  Q
    |||||||||| ||||||||||||||||||||||    
T  18233604 cgacacctataattacactgaattatgtcattt 18233636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 23930276 - 23930240
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcattt 353  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  23930276 gacacaacacctatgattacactgaattatgtcattt 23930240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  259 gaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    ||||||||| ||||||||||| ||||  |||||||||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 12235461 - 12235557
Alignment:
Q  257 gtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    ||||||||||| ||||  | ||| |||| ||||||||||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  12235461 gtgaagcacggacactttttggattaggggtgtcccggtgccggacacacgtcggtgtcggacacgacacctatgattacactgaattatgtcattt 12235557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 309
Target Start/End: Original strand, 9107302 - 9107353
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgtt 309  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9107302 tgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacacacgtt 9107353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 31959266 - 31959219
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  31959266 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacaca 31959219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 34595250 - 34595142
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgt 355  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||  | | ||||| |||| |||||| | | ||||||||||||||||| | ||| |    
T  34595250 tgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtg-tcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 34595152  T
Q  356 caaattatta 365  Q
    ||||||||||    
T  34595151 caaattatta 34595142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 28152214 - 28152107
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac-gacacctattattacactgaattatgtcatttgtc 356  Q
    |||||||||  ||||||||||| ||||  ||||||||||||||||||  ||  ||||| ||||| ||||| | | ||||||||||||||||| |||| ||    
T  28152214 tgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtc-gtgtccgacaccgacacttgtaattacactgaattatgtgatttttc 28152116  T
Q  357 aaattatta 365  Q
    |||||||||    
T  28152115 aaattatta 28152107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 34446687 - 34446572
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgt------cagacacgacacctattattacactgaattatgtca- 350  Q
    |||||||||| ||||||| ||| |||||||||||| ||||| || || |||  ||||      | |||||||||||||| |||||||||||||||||||     
T  34446687 tgaagcacggacactccttggattaggtgtgtcccagtgtcagatacgcgtcggtgttggacaccgacacgacacctatgattacactgaattatgtcat 34446588  T
Q  351 tttgtcaaattattat 366  Q
    ||| ||||||||||||    
T  34446587 tttctcaaattattat 34446572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 8776911 - 8776957
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||||    
T  8776911 tgaagcacggacactcctcggattaggtgtgtctcggtgtcggacac 8776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 380
Target Start/End: Original strand, 13689161 - 13689259
Alignment:
Q  283 ggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcggtgtct 380  Q
    ||||||||||| ||| |||||||||| |||||| ||||||| |||||| |||||| |||| | ||| | ||| ||||||||||||  | ||||||||||    
T  13689161 ggtgtgtcccgatgtgggacacacgtcagtgtccgacacgatacctatgattacattgaaatttgttattttctcaaattattatctgtgtcggtgtct 13689259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 9025448 - 9025494
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 12086347 - 12086397
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcatt-tgtcaaattattat 366  Q
    |||||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  12086347 gacacgacacctatgattaaactgaattatgtcattatctcaaattattat 12086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 17168465 - 17168515
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||||||||    
T  17168465 gacacgacacctattattacactaaattatatcattttctcaaattattat 17168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 4420149 - 4420217
Alignment:
Q  286 gtgtcccggtgtcggacacacgttagtgtcagacacga-cacctattattacactgaattatgtcattt 353  Q
    |||||| |||||| |||||||||| ||||| ||||| | |||||||  |||||||||||||| ||||||    
T  4420149 gtgtcctggtgtcagacacacgttggtgtctgacaccaacacctatggttacactgaattatatcattt 4420217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 18586232 - 18586340
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcatttgtca 357  Q
    |||||||||| ||||||||| | ||||||||| || | ||||||||  ||| ||| || |||||||||||||| ||||||||| |||||||||||| |||    
T  18586232 tgaagcacggacactcctcgaattaggtgtgttccagagtcggacatgcgtcagtctcggacacgacacctataattacactgtattatgtcatttttca 18586331  T
Q  358 aattattat 366  Q
    |||||||||    
T  18586332 aattattat 18586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 366
Target Start/End: Original strand, 7997132 - 7997218
Alignment:
Q  281 taggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    ||||||||||| | |||||||||| ||| |||||| |||||||||| ||| ||||||||| ||||| ||| ||| ||||||||||||    
T  7997132 taggtgtgtcctgatgtcggacacgcgtcagtgtccgacacgacacttataattacactgtattatatcattttctcaaattattat 7997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 21190999 - 21191107
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgt 355  Q
    |||||||||| ||||||||||| |||| ||||||||| |||||||||  ||| ||||| |||| |||||| | | ||||||||||||||||| | ||| |    
T  21190999 tgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgtt-gtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  356 caaattatta 365  Q
    ||||||||||    
T  21191098 caaattatta 21191107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 21137786 - 21137710
Alignment:
Q  281 taggtgtgtcccggtgtcggacacacgttagtgt----cagacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||||||||||||| |||| ||||    | |||||||||||||| ||| |||||||||| |||||||    
T  21137786 taggtgtgtcccggtgtcggacacgcgttggtgtccgaccgacacgacacctatgatttcactgaattacgtcattt 21137710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 38464316 - 38464361
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||    
T  38464316 tgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 26205723 - 26205798
Alignment:
Q  284 gtgtgtcccggtgtcggacacacgttagtgtcagacac------gacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||||||| || |||| ||||| |||||      ||||||||| ||||||||||||||||||||||    
T  26205723 gtgtgtcccggtgtcggatacgcgttggtgtccgacaccaacacgacacctatgattacactgaattatgtcattt 26205798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 39268540 - 39268588
Alignment:
Q  257 gtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    ||||||||||| ||||||||||| |||| ||||||| ||||||||||||    
T  39268540 gtgaagcacggacactcctcggattaggcgtgtcccagtgtcggacaca 39268588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 2419983 - 2419937
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||| ||||| |||||||||||||| |||||||||    
T  2419983 tgaagcacggacactcatcggattaggtgtgtcccggggtcggacac 2419937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 5467980 - 5468030
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    |||||||||||||| ||||||||||||||||| | ||| ||||||||||||    
T  5467980 gacacgacacctataattacactgaattatgtgattttatcaaattattat 5468030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 14873638 - 14873592
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| |||||||||||| ||||||    
T  14873638 tgaagcacggacactcctcggattaggcgtgtcccggtgttggacac 14873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 304
Target Start/End: Complemental strand, 17088402 - 17088361
Alignment:
Q  263 cacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 19820331 - 19820376
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| |||||||| || |||| ||||||||||||||||||    
T  19820331 tgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 31264495 - 31264446
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattatta 365  Q
    |||||||||| ||| ||||||||||||||||||| ||| |||||||||||    
T  31264495 gacacgacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 18607097 - 18607149
Alignment:
Q  315 cagacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    |||||||||||||||| |||||| |||||||||| | ||| ||||||||||||    
T  18607097 cagacacgacacctatgattacattgaattatgttattttctcaaattattat 18607149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 30067971 - 30068080
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||||| ||||| ||||| |||||||||||| |||||||||||||||  || || ||| || ||||||  |||| |||||||||||||| ||| ||    
T  30067971 tgaagcacggacactcatcggattaggtgtgtcccagtgtcggacacacgtcggtatccgactcggcacctacgattatactgaattatgtcattttctc 30068070  T
Q  357 aaattattat 366  Q
    ||||||||||    
T  30068071 aaattattat 30068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 366
Target Start/End: Complemental strand, 39820544 - 39820436
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtca-tttgtc 356  Q
    |||||||||| |||| |||||| |||| |||||||| |||||||||| |||  ||||| |||||||||||||| |||||||| |||||| ||| ||| ||    
T  39820544 tgaagcacggacacttctcggattaggcgtgtcccg-tgtcggacacgcgtcggtgtccgacacgacacctatgattacactaaattatatcattttctc 39820446  T
Q  357 aaattattat 366  Q
    ||||||||||    
T  39820445 aaattattat 39820436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 29510236 - 29510282
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  29510236 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 40064075 - 40064028
Alignment:
Q  261 agcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgt 308  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  40064075 agcacggacactcctcggattagatgtgtcccggtgtcggacacacgt 40064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 14692512 - 14692467
Alignment:
Q  321 cgacacctattattacactgaattatgtcatttgtcaaattattat 366  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  14692512 cgacacctatagttacactgaattatgtcatttctcaaattattat 14692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 44067643 - 44067574
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||||| ||||||||| | |||| |||||| |||||||||||| | | |||||| |||||||||||    
T  44067643 tgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacacgcatcagtgtccgacacgacacc 44067574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 1676828 - 1676733
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||| ||| | ||||| ||||||||| | |||||| ||||   ||  ||||| |||||||||||||| |||||||| || ||||||||||    
T  1676828 tgaagcacggacacccttcggattaggtgtgtgcaggtgtcagacatgtgtcggtgtccgacacgacacctatgattacactaaaatatgtcattt 1676733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 22652103 - 22652056
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||||| ||||||||||| |||  ||||||||||||||||||||    
T  22652103 tgaagcacggacactcctcggattagacgtgtcccggtgtcggacaca 22652056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Complemental strand, 3025667 - 3025559
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac-gacacctattattacactgaattatgtca-tttgt 355  Q
    |||||||||| ||||||||||| |||  ||||| | ||||| |||||  ||  ||||| ||||| ||||||||| ||||||||||||||||| | ||| |    
T  3025667 tgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtc-gtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T
Q  356 caaattatta 365  Q
    ||||||||||    
T  3025568 caaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 16641912 - 16641980
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||| | ||||||||||| |||||||||||||||||  |||||| | | ||||| |||||||||||    
T  16641912 tgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatg-tcgtgtccgacacgacacc 16641980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 16988029 - 16987973
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgt 314  Q
    |||||||||| ||||||||||| |||| |||||||||||| || |||| ||| ||||    
T  16988029 tgaagcacggacactcctcggattaggggtgtcccggtgttgggcacatgttggtgt 16987973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 365
Target Start/End: Original strand, 405 - 513
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgt 355  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||| || | ||||| |||| |||||| | | ||||||||||||| ||| | ||| |    
T  405 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcg-tcgtgtccgacaccgacacttgtaattacactgaattttgtgatttttt 503  T
Q  356 caaattatta 365  Q
    ||||||||||    
T  504 caaattatta 513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 375
Target Start/End: Complemental strand, 24343629 - 24343505
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac------gacacctattattacactgaattatgtca- 350  Q
    |||||||||| |||||||| || |||| ||||||||||||||||||| |||  ||||| |||||      ||||||||| ||||||||||||||||| |     
T  24343629 tgaagcacggacactcctcagaataggcgtgtcccggtgtcggacacgcgtcggtgtcggacaccgacacgacacctataattacactgaattatgtaat 24343530  T
Q  351 tttgtcaaattattatgcgagtcgg 375  Q
    ||| |||||||||||| || |||||    
T  24343529 tttctcaaattattatccgtgtcgg 24343505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 53381533 - 53381596
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac 321  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| || ||| |||||| |||||    
T  53381533 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggatacgcgtcagtgtccgacac 53381596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 18513178 - 18513293
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac------gacacctattattacactgaattatgtca- 350  Q
    |||||||||| |||||||| || |||| |||||| ||||||||||||||||  ||||| |||||      ||||| ||| |||||| ||||||||||||     
T  18513178 tgaagcacggacactcctcagattaggcgtgtcctggtgtcggacacacgtcggtgtccgacacaacactgacacatatgattacattgaattatgtcat 18513277  T
Q  351 tttgtcaaattattat 366  Q
    ||| ||||||||||||    
T  18513278 tttctcaaattattat 18513293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 269 - 353
Target Start/End: Original strand, 39507073 - 39507157
Alignment:
Q  269 cactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    ||||||||||| |||||||||| |||||||||||||   | |||||| ||||  |||||||| |||||||| |||||| ||||||    
T  39507073 cactcctcggaataggtgtgtctcggtgtcggacacgtatcagtgtccgacataacacctatgattacacttaattatatcattt 39507157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 3947704 - 3947750
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||||    
T  3947704 tgaagcacggacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 23292929 - 23292975
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  23292929 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 23292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 298
Target Start/End: Complemental strand, 40784069 - 40784029
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtc 298  Q
    |||||||||| ||||||||||| ||||||||||||||||||    
T  40784069 tgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 375
Target Start/End: Original strand, 20743280 - 20743339
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcgg 375  Q
    ||||| |||||||| ||||||||||||||||||| ||| |||||||||||| || |||||    
T  20743280 gacacaacacctatgattacactgaattatgtcattttctcaaattattatccgtgtcgg 20743339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 28084641 - 28084594
Alignment:
Q  257 gtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    ||||||||||| ||||||||||| |||| ||||||| |||||||||||    
T  28084641 gtgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 28084594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 19482795 - 19482749
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||  ||||||||||| |||||||||||| |||||||||||    
T  19482795 tgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 19482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 366
Target Start/End: Original strand, 31243550 - 31243600
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  31243550 gacatgacacctatgattacactgaattatgtcattttctcaaattattat 31243600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 715548 - 715593
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  715548 tgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 752874 - 752919
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  752874 tgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 17876282 - 17876214
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacac 326  Q
    |||||||| | ||||||| ||| ||||||||||| |||||||||||  |||  ||||| ||||||||||    
T  17876282 tgaagcacagacactccttggattaggtgtgtcctggtgtcggacaagcgtcggtgtctgacacgacac 17876214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 30520438 - 30520474
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcattt 353  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  30520438 gacactacacctatgattacactgaattatgtcattt 30520474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 18840956 - 18841001
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  18840956 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 365
Target Start/End: Original strand, 37411188 - 37411295
Alignment:
Q  259 gaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagaca-cgacacctattattacactgaattatgtca-tttgtc 356  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||| || | ||||  |||| |||||| ||| || |||||||||||||| | ||| ||    
T  37411188 gaagcacaggcactcctcggactaggcgtgtcccagtgtcggacacgcg-tcgtgttcgacatcgacacatataatcacactgaattatgtgattttctc 37411286  T
Q  357 aaattatta 365  Q
    |||||||||    
T  37411287 aaattatta 37411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 379
Target Start/End: Complemental strand, 25544538 - 25544475
Alignment:
Q  317 gacacgacacctattattacactgaattatgtca-tttgtcaaattattatgcgagtcggtgtc 379  Q
    |||||||||||||| ||||||||||||||| ||| ||| |||||||||||| || |||||||||    
T  25544538 gacacgacacctatgattacactgaattatatcattttctcaaattattatacgtgtcggtgtc 25544475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 366
Target Start/End: Original strand, 34006933 - 34007043
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac-gacacctattattacactgaattatgtc-atttgt 355  Q
    |||||||||| ||||||| | | ||||||||| |||||||| |||||   |  |||||  |||| ||||||||| |||||||||||||||||| |||| |    
T  34006933 tgaagcacggacactccttgaattaggtgtgttccggtgtcagacacgaataggtgtcccacaccgacacctatgattacactgaattatgtcaatttct 34007032  T
Q  356 caaattattat 366  Q
    |||||||||||    
T  34007033 caaattattat 34007043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 37419870 - 37419824
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  37419870 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 2438662 - 2438707
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||    
T  2438662 tgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 11308006 - 11308042
Alignment:
Q  317 gacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||||||| ||||||||||||||||||||||    
T  11308006 gacacgacacctatgattacactgaattatgtcattt 11308042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 10535688 - 10535751
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacac 321  Q
    |||||||||  ||||||||||| |||| |||||| |||||| ||||||| |||||||| |||||    
T  10535688 tgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacacacattagtgtcggacac 10535751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 44860447 - 44860400
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||||| ||||||||| | ||||||||||||| |||||||||||    
T  44860447 tgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacaca 44860400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 15657991 - 15657945
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    ||||||| || |||||||||||||||| ||||||||| |||||||||    
T  15657991 tgaagcatggacactcctcggactaggcgtgtcccggcgtcggacac 15657945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 21091840 - 21091794
Alignment:
Q  257 gtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    ||||||||||| ||||| ||||| |||||||||||||||||| ||||    
T  21091840 gtgaagcacggacactcttcggaataggtgtgtcccggtgtccgaca 21091794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 26769638 - 26769592
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||||||    
T  26769638 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Original strand, 38117102 - 38117148
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  38117102 tgaagcacggacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 366
Target Start/End: Original strand, 10535762 - 10535811
Alignment:
Q  318 acacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    ||||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  10535762 acacgacacttatgattacactgaattatgtcattttctcaaattattat 10535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 17776717 - 17776664
Alignment:
Q  255 ctgtgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgt 308  Q
    ||||||||||||| ||||||||||| ||||  |||||||  |||||||||||||    
T  17776717 ctgtgaagcacggacactcctcggattaggcctgtcccgaggtcggacacacgt 17776664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Complemental strand, 18622718 - 18622673
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| || |||||||||||||| |||||    
T  18622718 tgaagcacggacactcctcggattaagtgtgtcccggtgtaggaca 18622673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 366
Target Start/End: Complemental strand, 12748747 - 12748691
Alignment:
Q  311 gtgtcagacacgacacctattattacactgaattatgtca-tttgtcaaattattat 366  Q
    ||||| ||||| |||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  12748747 gtgtccgacacaacacctatgattacactgaactatgtcattttctcaaattattat 12748691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 225200 - 225269
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacc 327  Q
    |||||||||| ||||||||| | |||| |||||| ||||||| |||| ||| |||||| |||||||||||    
T  225200 tgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacacgcgtcagtgtccgacacgacacc 225269  T

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Target: scaffold0199 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 2065 - 1970
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacacacgttagtgtcagacacgacacctattattacactgaattatgtcattt 353  Q
    |||||||||| ||| | ||||| ||||||||| | |||||| ||||   ||  ||||| |||||||||||||| |||||||| || ||||||||||    
T  2065 tgaagcacggacacccttcggattaggtgtgtgcaggtgtcagacatgtgtcggtgtccgacacgacacctatgattacactaaaatatgtcattt 1970  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 32820 - 32773
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacaca 305  Q
    |||||||| | ||||||||||| || ||||||||||||||||||||||    
T  32820 tgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacaca 32773  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 241721 - 241675
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 304  Q
    |||||||||| |||| |||||| |||| |||||||||||||||||||    
T  241721 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

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Target: scaffold0793 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 303
Target Start/End: Original strand, 4824 - 4869
Alignment:
Q  258 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggaca 303  Q
    |||||||||| ||||||||||| |||| ||||||| ||||||||||    
T  4824 tgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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