View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12454_low_7 (Length: 348)

Name: NF12454_low_7
Description: NF12454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12454_low_7
NF12454_low_7
[»] chr7 (39 HSPs)
chr7 (1-339)||(16006583-16006921)
chr7 (1-339)||(21742903-21743241)
chr7 (1-307)||(8776525-8776831)
chr7 (150-339)||(48785628-48785817)
chr7 (150-339)||(13395080-13395269)
chr7 (148-338)||(21064780-21064970)
chr7 (150-339)||(123808-123997)
chr7 (150-338)||(35366540-35366727)
chr7 (150-338)||(4993801-4993989)
chr7 (150-315)||(13733176-13733341)
chr7 (1-92)||(17505632-17505723)
chr7 (1-92)||(17547491-17547582)
chr7 (99-186)||(12756486-12756572)
chr7 (69-186)||(14036433-14036550)
chr7 (69-186)||(14346463-14346580)
chr7 (108-186)||(12255561-12255639)
chr7 (69-186)||(14044983-14045100)
chr7 (69-186)||(14355013-14355130)
chr7 (99-186)||(17061730-17061816)
chr7 (31-118)||(11085162-11085249)
chr7 (33-118)||(11092902-11092987)
chr7 (148-276)||(16056641-16056769)
chr7 (69-132)||(9033169-9033231)
chr7 (149-186)||(810899-810936)
chr7 (145-186)||(16219486-16219527)
chr7 (150-186)||(68061-68097)
chr7 (150-186)||(9389465-9389501)
chr7 (69-132)||(11768742-11768804)
chr7 (108-186)||(44116778-44116856)
chr7 (148-186)||(22073229-22073267)
chr7 (149-186)||(15113258-15113295)
chr7 (69-186)||(16091992-16092108)
chr7 (71-132)||(17060247-17060307)
chr7 (149-186)||(26212309-26212346)
chr7 (149-185)||(15143808-15143844)
chr7 (81-132)||(15439498-15439550)
chr7 (150-186)||(18302494-18302530)
chr7 (150-186)||(28505070-28505106)
chr7 (150-186)||(44014489-44014525)
[»] chr4 (35 HSPs)
chr4 (1-339)||(41791837-41792175)
chr4 (1-339)||(4171189-4171527)
chr4 (1-339)||(14698881-14699219)
chr4 (150-339)||(287405-287594)
chr4 (154-339)||(28383143-28383328)
chr4 (150-339)||(47126441-47126630)
chr4 (150-338)||(10314029-10314217)
chr4 (150-339)||(55502364-55502553)
chr4 (150-338)||(31116670-31116858)
chr4 (150-315)||(15279726-15279891)
chr4 (1-92)||(16277955-16278046)
chr4 (1-92)||(53387565-53387656)
chr4 (109-186)||(21815072-21815149)
chr4 (109-186)||(21815401-21815478)
chr4 (109-186)||(21818494-21818571)
chr4 (99-277)||(52242872-52243049)
chr4 (99-337)||(44928542-44928779)
chr4 (108-282)||(15464603-15464778)
chr4 (108-186)||(44102483-44102561)
chr4 (69-127)||(14185345-14185403)
chr4 (150-192)||(16359818-16359860)
chr4 (150-187)||(8846689-8846726)
chr4 (33-118)||(21189625-21189710)
chr4 (150-186)||(15099665-15099701)
chr4 (150-185)||(15190632-15190667)
chr4 (69-132)||(17333515-17333577)
chr4 (149-186)||(7089190-7089227)
chr4 (149-186)||(12774313-12774350)
chr4 (149-186)||(17047843-17047880)
chr4 (150-186)||(3332201-3332237)
chr4 (150-186)||(13812578-13812614)
chr4 (77-133)||(14852698-14852753)
chr4 (150-186)||(22633982-22634018)
chr4 (150-186)||(24029057-24029093)
chr4 (69-132)||(32306818-32306881)
[»] chr1 (20 HSPs)
chr1 (1-339)||(20579630-20579968)
chr1 (150-339)||(20631631-20631820)
chr1 (150-339)||(36181890-36182079)
chr1 (150-339)||(22899869-22900058)
chr1 (150-338)||(24087730-24087918)
chr1 (150-338)||(45307605-45307793)
chr1 (150-315)||(14431994-14432159)
chr1 (150-315)||(37358783-37358948)
chr1 (69-186)||(26065174-26065291)
chr1 (99-337)||(433272-433509)
chr1 (72-132)||(12328442-12328503)
chr1 (70-132)||(51327032-51327095)
chr1 (150-186)||(20637165-20637201)
chr1 (69-186)||(28194218-28194336)
chr1 (151-186)||(22921637-22921672)
chr1 (149-186)||(21754350-21754387)
chr1 (149-186)||(38801162-38801199)
chr1 (150-186)||(20248592-20248628)
chr1 (150-186)||(20918917-20918953)
chr1 (150-186)||(35981456-35981492)
[»] chr5 (33 HSPs)
chr5 (1-339)||(26496051-26496388)
chr5 (1-339)||(29324838-29325176)
chr5 (150-339)||(23693772-23693961)
chr5 (150-339)||(22880522-22880711)
chr5 (150-338)||(4398022-4398210)
chr5 (150-339)||(16259184-16259373)
chr5 (150-339)||(22589348-22589537)
chr5 (150-339)||(22592903-22593092)
chr5 (150-339)||(22596458-22596647)
chr5 (150-339)||(16255551-16255740)
chr5 (150-338)||(43121477-43121665)
chr5 (150-338)||(43125010-43125198)
chr5 (150-315)||(26360725-26360890)
chr5 (99-186)||(22144315-22144401)
chr5 (99-186)||(36154598-36154684)
chr5 (108-186)||(11581015-11581093)
chr5 (69-186)||(5888945-5889063)
chr5 (69-131)||(30615956-30616019)
chr5 (69-134)||(25576677-25576741)
chr5 (150-186)||(22959303-22959339)
chr5 (150-186)||(25744036-25744072)
chr5 (69-132)||(25574293-25574355)
chr5 (69-132)||(25575486-25575548)
chr5 (148-186)||(21501924-21501962)
chr5 (149-186)||(1096781-1096818)
chr5 (69-134)||(21731282-21731346)
chr5 (149-186)||(25421846-25421883)
chr5 (145-186)||(26011804-26011845)
chr5 (150-186)||(15441727-15441763)
chr5 (150-186)||(19660607-19660643)
chr5 (86-134)||(21328036-21328083)
chr5 (154-186)||(21741313-21741345)
chr5 (150-186)||(22119962-22119998)
[»] chr2 (17 HSPs)
chr2 (1-339)||(21241274-21241611)
chr2 (1-339)||(21238724-21239061)
chr2 (1-339)||(24504868-24505205)
chr2 (1-339)||(31506330-31506668)
chr2 (1-339)||(31503764-31504102)
chr2 (150-339)||(41684378-41684567)
chr2 (150-339)||(44621242-44621431)
chr2 (150-339)||(31756232-31756421)
chr2 (161-338)||(12627507-12627686)
chr2 (1-92)||(20590950-20591041)
chr2 (99-186)||(23708388-23708474)
chr2 (148-186)||(23076754-23076792)
chr2 (149-186)||(298585-298622)
chr2 (69-134)||(18546766-18546830)
chr2 (153-186)||(28406297-28406330)
chr2 (150-186)||(23071732-23071768)
chr2 (150-186)||(23791591-23791627)
[»] scaffold0525 (2 HSPs)
scaffold0525 (1-339)||(9336-9674)
scaffold0525 (150-339)||(10489-10679)
[»] chr8 (27 HSPs)
chr8 (1-339)||(7300680-7301018)
chr8 (1-339)||(45134523-45134861)
chr8 (1-339)||(6607872-6608210)
chr8 (6-297)||(21414886-21415177)
chr8 (150-339)||(22059006-22059195)
chr8 (153-339)||(28854268-28854454)
chr8 (150-339)||(17615232-17615421)
chr8 (150-315)||(22145027-22145192)
chr8 (150-338)||(10829072-10829260)
chr8 (150-315)||(24707448-24707613)
chr8 (69-132)||(22963243-22963305)
chr8 (69-186)||(17085922-17086039)
chr8 (69-132)||(23668044-23668106)
chr8 (108-186)||(41598457-41598535)
chr8 (150-186)||(39834147-39834183)
chr8 (69-132)||(20533232-20533294)
chr8 (69-132)||(40492676-40492738)
chr8 (69-134)||(22252986-22253051)
chr8 (149-186)||(20536521-20536558)
chr8 (149-186)||(21918771-21918808)
chr8 (69-134)||(22525751-22525815)
chr8 (149-186)||(23406694-23406731)
chr8 (150-186)||(5866046-5866082)
chr8 (150-186)||(17141229-17141265)
chr8 (150-186)||(20498879-20498915)
chr8 (150-186)||(21249697-21249733)
chr8 (150-186)||(37116664-37116700)
[»] chr6 (30 HSPs)
chr6 (1-339)||(8523097-8523435)
chr6 (1-339)||(15685718-15686056)
chr6 (150-339)||(16102658-16102847)
chr6 (150-339)||(12596272-12596461)
chr6 (148-338)||(15539591-15539781)
chr6 (150-338)||(16813091-16813279)
chr6 (150-338)||(16830111-16830299)
chr6 (150-315)||(29493068-29493233)
chr6 (99-186)||(18456980-18457066)
chr6 (99-191)||(25644587-25644678)
chr6 (148-200)||(2287663-2287715)
chr6 (150-186)||(4185593-4185629)
chr6 (150-186)||(4667983-4668019)
chr6 (134-186)||(19668672-19668724)
chr6 (150-186)||(22080507-22080543)
chr6 (69-132)||(18696722-18696784)
chr6 (69-132)||(20224178-20224240)
chr6 (69-132)||(22118162-22118224)
chr6 (151-186)||(27333054-27333089)
chr6 (151-186)||(27393794-27393829)
chr6 (152-186)||(19652512-19652546)
chr6 (144-186)||(23019716-23019758)
chr6 (150-187)||(4674829-4674866)
chr6 (149-186)||(28496243-28496280)
chr6 (149-186)||(29808654-29808691)
chr6 (150-186)||(4189271-4189307)
chr6 (150-186)||(18821590-18821626)
chr6 (150-186)||(21939699-21939735)
chr6 (150-186)||(25928594-25928630)
chr6 (150-186)||(35008465-35008501)
[»] chr3 (41 HSPs)
chr3 (1-339)||(54973551-54973889)
chr3 (1-339)||(54976161-54976499)
chr3 (1-339)||(54978771-54979109)
chr3 (150-339)||(2034599-2034788)
chr3 (150-339)||(2038106-2038295)
chr3 (150-339)||(2041847-2042036)
chr3 (150-339)||(14038492-14038681)
chr3 (150-339)||(14041960-14042149)
chr3 (150-339)||(39231039-39231228)
chr3 (150-319)||(18959209-18959378)
chr3 (151-338)||(603258-603445)
chr3 (150-337)||(15009776-15009963)
chr3 (150-338)||(54047027-54047215)
chr3 (1-92)||(10554600-10554691)
chr3 (1-92)||(55292269-55292360)
chr3 (99-186)||(53070468-53070554)
chr3 (99-186)||(42386676-42386762)
chr3 (99-338)||(17247904-17248142)
chr3 (99-186)||(52523497-52523583)
chr3 (108-186)||(2050969-2051047)
chr3 (149-186)||(14572902-14572939)
chr3 (150-186)||(13210097-13210133)
chr3 (148-200)||(16800127-16800179)
chr3 (151-187)||(23083131-23083167)
chr3 (149-189)||(30030152-30030192)
chr3 (147-186)||(37250936-37250975)
chr3 (148-186)||(324548-324586)
chr3 (149-186)||(1644452-1644489)
chr3 (88-132)||(12269821-12269866)
chr3 (149-186)||(12934080-12934117)
chr3 (221-338)||(14179708-14179825)
chr3 (149-186)||(32307983-32308020)
chr3 (149-186)||(49667853-49667890)
chr3 (150-186)||(839543-839579)
chr3 (150-186)||(1465179-1465215)
chr3 (150-186)||(11424533-11424569)
chr3 (150-186)||(12340068-12340104)
chr3 (69-132)||(15447587-15447651)
chr3 (150-186)||(16097645-16097681)
chr3 (150-186)||(22110120-22110156)
chr3 (150-186)||(28350934-28350970)
[»] scaffold0586 (1 HSPs)
scaffold0586 (6-297)||(2024-2315)
[»] scaffold0395 (1 HSPs)
scaffold0395 (150-338)||(8110-8298)
[»] scaffold0141 (1 HSPs)
scaffold0141 (150-338)||(33461-33649)
[»] scaffold0049 (1 HSPs)
scaffold0049 (150-338)||(81163-81351)
[»] scaffold0021 (3 HSPs)
scaffold0021 (150-315)||(133611-133776)
scaffold0021 (144-186)||(136136-136178)
scaffold0021 (144-186)||(144844-144886)
[»] scaffold0056 (1 HSPs)
scaffold0056 (99-178)||(79107-79185)
[»] scaffold0503 (1 HSPs)
scaffold0503 (108-186)||(12202-12280)
[»] scaffold0031 (1 HSPs)
scaffold0031 (99-186)||(20195-20281)
[»] scaffold0839 (1 HSPs)
scaffold0839 (99-338)||(1696-1933)
[»] scaffold0357 (2 HSPs)
scaffold0357 (108-186)||(15868-15947)
scaffold0357 (86-186)||(13382-13482)
[»] scaffold0142 (1 HSPs)
scaffold0142 (108-186)||(17053-17131)
[»] scaffold0010 (2 HSPs)
scaffold0010 (69-186)||(60483-60600)
scaffold0010 (150-186)||(130222-130258)
[»] scaffold0169 (1 HSPs)
scaffold0169 (69-132)||(29247-29309)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-186)||(24366-24483)
[»] scaffold0750 (1 HSPs)
scaffold0750 (69-134)||(3830-3894)
[»] scaffold0628 (1 HSPs)
scaffold0628 (149-186)||(2572-2609)
[»] scaffold0077 (1 HSPs)
scaffold0077 (69-130)||(55510-55570)
[»] scaffold0475 (1 HSPs)
scaffold0475 (150-186)||(9391-9427)
[»] scaffold0125 (1 HSPs)
scaffold0125 (150-186)||(45560-45596)
[»] scaffold0034 (1 HSPs)
scaffold0034 (150-282)||(32851-32983)
[»] scaffold0556 (2 HSPs)
scaffold0556 (144-186)||(8325-8367)
scaffold0556 (150-186)||(7126-7162)
[»] scaffold0555 (1 HSPs)
scaffold0555 (144-186)||(10310-10352)
[»] scaffold0507 (1 HSPs)
scaffold0507 (148-186)||(7827-7865)
[»] scaffold0078 (1 HSPs)
scaffold0078 (148-186)||(10841-10879)
[»] scaffold0009 (1 HSPs)
scaffold0009 (69-162)||(85780-85873)
[»] scaffold1984 (1 HSPs)
scaffold1984 (149-186)||(444-481)
[»] scaffold0476 (1 HSPs)
scaffold0476 (227-288)||(13235-13296)
[»] scaffold0217 (1 HSPs)
scaffold0217 (149-186)||(16370-16407)
[»] scaffold0211 (1 HSPs)
scaffold0211 (149-186)||(28579-28616)
[»] scaffold0080 (1 HSPs)
scaffold0080 (149-186)||(40226-40263)
[»] scaffold0028 (1 HSPs)
scaffold0028 (149-186)||(132967-133004)
[»] scaffold1419 (1 HSPs)
scaffold1419 (150-186)||(338-374)
[»] scaffold0347 (1 HSPs)
scaffold0347 (150-186)||(344-380)
[»] scaffold0261 (1 HSPs)
scaffold0261 (150-186)||(15974-16010)
[»] scaffold0259 (1 HSPs)
scaffold0259 (150-186)||(10474-10510)
[»] scaffold0233 (1 HSPs)
scaffold0233 (150-186)||(14313-14349)
[»] scaffold0192 (1 HSPs)
scaffold0192 (150-186)||(10226-10262)
[»] scaffold0165 (1 HSPs)
scaffold0165 (146-186)||(27488-27528)
[»] scaffold0161 (1 HSPs)
scaffold0161 (150-186)||(2214-2250)
[»] scaffold0139 (1 HSPs)
scaffold0139 (150-186)||(38634-38670)
[»] scaffold0138 (1 HSPs)
scaffold0138 (150-186)||(13255-13291)
[»] scaffold0124 (1 HSPs)
scaffold0124 (150-186)||(24420-24456)
[»] scaffold0075 (1 HSPs)
scaffold0075 (150-186)||(8063-8099)
[»] scaffold0071 (1 HSPs)
scaffold0071 (69-132)||(14541-14605)
[»] scaffold0026 (1 HSPs)
scaffold0026 (150-186)||(59272-59308)
[»] scaffold0022 (1 HSPs)
scaffold0022 (150-186)||(128739-128775)
[»] scaffold0020 (1 HSPs)
scaffold0020 (150-186)||(15600-15636)
[»] scaffold0016 (1 HSPs)
scaffold0016 (150-186)||(207288-207324)
[»] scaffold0006 (2 HSPs)
scaffold0006 (150-186)||(97321-97357)
scaffold0006 (150-186)||(106599-106635)


Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 16006583 - 16006921
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16006583 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 16006682  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16006683 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 16006782  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16006783 accattccattctgacactattccaagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 16006882  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16006883 ctcacagctcaaaaacacagaatcttgcaagctctctgc 16006921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 21743241 - 21742903
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  21743241 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtataatcaagaataacttctcccctacctcatgggtctactcatatcatcacg 21743142  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21743141 tgcgacaaatgatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 21743042  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21743041 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 21742942  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  21742941 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 21742903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 8776525 - 8776831
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  8776525 ctaagtcgacgtcattaaacattacaaacatcctttctgaatctccgtataatcaagaatagcttctctcctacctcaagggtctactcatatcatcacg 8776624  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8776625 tgcgacaaaagatcgcaaaatcctaaacaaggcttatgaaatgggacaactcgcgaggcgagaggctctactcaccatggcgagttagggtaaaatactc 8776724  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8776725 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcataaaggtacatgttcaggccctcataaacacccaaggttaaa 8776824  T
Q  301 ctcacag 307  Q
    |||||||    
T  8776825 ctcacag 8776831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 48785628 - 48785817
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  48785628 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 48785727  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  48785728 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 48785817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 13395269 - 13395080
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  13395269 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 13395170  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13395169 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacggaatcttgcaagctctctgc 13395080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 148 - 338
Target Start/End: Complemental strand, 21064970 - 21064780
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaact 247  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||| |||||  | ||||||||||||| ||||||||||||||||||||||||||      
T  21064970 aactcacgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaata 21064871  T
Q  248 ttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
    || |||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  21064870 tttcctaatcattattgtacatgttcaggccctcataaacatctaaggttaaactcacagctcaaaatcacaaaatcttgcaagctctctg 21064780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 123997 - 123808
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  123997 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 123898  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  123897 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 123808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 35366540 - 35366727
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| |||||  | ||||||||||||| ||||||||||||||||||||||||||||||    
T  35366540 ctcgcgaggcgagagcctc-actcgccacggcgagttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacttt 35366638  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||   ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  35366639 gcctaatcattgtagtacatgttcaggccctcaaaaacatccaaggttaaactcacagcttaaaaacacgaaatcttgcaagctctctg 35366727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 4993801 - 4993989
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   ||||||||||||| | ||||  ||||||| |||| |||||||||||    
T  4993801 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagattccattctgactctattctgagttcaaactcaatctaaaacttt 4993900  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||   |||||||||||||||||    
T  4993901 gcctaatcattaaggtacatgttcaggccctcataaacatctaaggttaaactcacagctcaaaatcacgagatcttgcaagctctctg 4993989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 13733341 - 13733176
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||| ||||||||| |||||||||||| |||||||||||||| ||  ||||    ||||||||| | |  | || ||||||||||||||||||||||||    
T  13733341 ctcgcaaggcgagagcctctactcgccacggcgagttagggtataacgctcaaggatccattctgcctcattcccgagttcaatctcattctaaaacttt 13733242  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13733241 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaa 13733176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17505723 - 17505632
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17505723 ctaagtcgacgtcattaaacattataaacattctctccgaatctctgtataatcaagaataacttctctcctacctcaagggtctactcata 17505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17547491 - 17547582
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  17547491 ctaagtcgacgtcattaaacattataaacattctctccgaatctctgtataatcaagaataacttctctcctacctcaagggtctactcata 17547582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 12756572 - 12756486
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| ||||||||||||||||||||||||| || ||| || |||||||||||||||||| ||||||||||||||| |||||    
T  12756572 cgtgcgacaaa-gatcgcaaaatcctaaacaaggcttttgtaattgggcaactcgcgaggcgagagcctctactcgccatggtgagtt 12756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 14036433 - 14036550
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| || ||||||| |||| ||||||||||| |||||||||| |||||||||||  ||||||||| || || |||||||||||||   ||    
T  14036433 tcctaccccaaggatcaactcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggtattctgaaattggccagctcgcgaggcgagccact 14036531  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||| ||||||||||    
T  14036532 ctactcgctatggcgagtt 14036550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 14346463 - 14346580
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| || ||||||| |||| ||||||||||| |||||||||| |||||||||||  ||||||||| || || |||||||||||||   ||    
T  14346463 tcctaccccaaggatcaactcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggtattctgaaattggccagctcgcgaggcgagccact 14346561  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||| ||||||||||    
T  14346562 ctactcgctatggcgagtt 14346580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 12255639 - 12255561
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  ||||| || ||||| ||||||||||||||||| |||||||||| ||||||||||    
T  12255639 aaagatcgcaaaatcctaaacaagcattctgtaactggga-aactcgcgaggcgagagcctctactcgctatggcgagtt 12255561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 14044983 - 14045100
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg-cttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||  ||||||||  || || |||||||||||||   ||    
T  14044983 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaaggtattctgaaactgggcagctcgcgaggcgagccact 14045081  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||| ||||||||||    
T  14045082 ctactcgctatggcgagtt 14045100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 14355013 - 14355130
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg-cttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||  ||||||||  || || |||||||||||||   ||    
T  14355013 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaaggtattctgaaactgggcagctcgcgaggcgagccact 14355111  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||| ||||||||||    
T  14355112 ctactcgctatggcgagtt 14355130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 17061816 - 17061730
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctg-aaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||  ||||| |||| || || ||||||||||||||| ||||||||||||| |||||||    
T  17061816 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaaataggtca-ctcgcgaggcgagagcctctactcgccatcgcgagtt 17061730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 11085162 - 11085249
Alignment:
Q  31 tcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa 118  Q
    ||||||||||| |||  ||||||||  ||||||| |  ||||||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  11085162 tcctctctgaacctcattataatcattaataacttcattcctaccccaagggtcgactcataacatgacgtgcgacaaaagatcgcaa 11085249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 11092902 - 11092987
Alignment:
Q  33 ctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa 118  Q
    ||||||||| |||  ||||||||  ||||||| |  ||||||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  11092902 ctctctgaacctcattataatcattaataacttcattcctaccccaagggtcgactcataacatgacgtgcgacaaaagatcgcaa 11092987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 16056641 - 16056769
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaact 247  Q
    ||||||||||||||||| |||||||||| ||||||||||  |||  ||| | ||  | |||||||| | || |||||| ||||||||||| |||||||      
T  16056641 aactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaattcccaaaaatccattcttaaactattccaggttcaatctcaatctaaaatc 16056740  T
Q  248 ttacctaatcattaaggtacatgttcagg 276  Q
    || |||| ||||||   ||||||||||||    
T  16056741 tttcctattcattattatacatgttcagg 16056769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 9033231 - 9033169
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  9033231 tcctaccccaagggtcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 9033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 810936 - 810899
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||||||||||||||||||||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagtt 810899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 16219527 - 16219486
Alignment:
Q  145 gacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  16219527 gacaactcgcgaggcgagggcctctactcgccatggcgagtt 16219486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 68061 - 68097
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  68061 ctcgcgaggcgagagcctctactcgccatggcgagtt 68097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 9389501 - 9389465
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9389501 ctcgcgaggcgagagcctctactcgccatggcgagtt 9389465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 11768804 - 11768742
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| ||| ||||||| |||||||||| |||||||||||    
T  11768804 tcctaccccaagggtcgactcataacatctcgtacgacaaa-gatcgcaaaaccctaaacaagg 11768742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 44116778 - 44116856
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||| ||  ||||| || || | || ||||||||||||||| |||| ||||||||||||||||    
T  44116778 aaagatcgcaaaatcctaaactagcgttctgtaactgagtca-ctcgcgaggcgagagcctctgctcgccatggcgagtt 44116856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 22073229 - 22073267
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| | |||||||||||||||||||||    
T  22073229 aactcgcgaggcgagggcctctactcgccatggcgagtt 22073267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 15113258 - 15113295
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  15113258 actcgcgaggcgagagcctctactcgctatggcgagtt 15113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 16091992 - 16092108
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctc 168  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| | ||||||||  |||||||   |  || |||||||||||||   |||    
T  16091992 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccgtaaacaagtattctgaatctgtgcagctcgcgaggcgagccactc 16092090  T
Q  169 tactcgccatggcgagtt 186  Q
    ||||||  ||||||||||    
T  16092091 tactcgttatggcgagtt 16092108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 17060307 - 17060247
Alignment:
Q  71 ctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||| ||||| || ||||||| |||| ||||||| |||||||||||||| |||||||||||    
T  17060307 ctaccccaaggatcaactcataacatctcgtgcga-aaaagatcgcaaaaccctaaacaagg 17060247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 26212309 - 26212346
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  26212309 actcgcgaggcgagagcctctactcgccgtggcgagtt 26212346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 185
Target Start/End: Complemental strand, 15143844 - 15143808
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagt 185  Q
    |||||||||||||||| |||| |||||||||||||||    
T  15143844 actcgcgaggcgagagcctctgctcgccatggcgagt 15143808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 15439498 - 15439550
Alignment:
Q  81 ggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    |||| ||||||| ||||||||||||||||||||| ||| || |||||||||||    
T  15439498 ggtcaactcataacatcacgtgcgacaaaagatcacaagaaacctaaacaagg 15439550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 18302494 - 18302530
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  18302494 ctcgcgaggcgagagcctctgctcgccatggcgagtt 18302530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 28505106 - 28505070
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  28505106 ctcgcgaggcgagagcctctgctcgccatggcgagtt 28505070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 44014489 - 44014525
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  44014489 ctcgcgaggcgagagcctctactcaccatggcgagtt 44014525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 41791837 - 41792175
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41791837 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 41791936  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41791937 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaaatcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 41792036  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41792037 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 41792136  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41792137 ctcacagctcaaaaacacagaatcttgcaagctctctgc 41792175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 4171189 - 4171527
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  4171189 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtataatcaagaataacttctcccctacctcatgggtctactcatatcatcacg 4171288  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4171289 tgcgacaaatgatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 4171388  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4171389 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 4171488  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  4171489 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 4171527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 14698881 - 14699219
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  14698881 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcatgggtctactcatatcatcacg 14698980  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14698981 tgcgacaaatgatcgccaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 14699080  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  14699081 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 14699180  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  14699181 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 14699219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 287405 - 287594
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  287405 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 287504  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  287505 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 287594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 154 - 339
Target Start/End: Original strand, 28383143 - 28383328
Alignment:
Q  154 cgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaactttacct 253  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| || ||||||||||||||||||||| |||    
T  28383143 cgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagctcaatctcattctaaaactttgcct 28383242  T
Q  254 aatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  28383243 aatcattaaggtacatgttcaggccctcataaacacctaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 28383328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 47126630 - 47126441
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||| ||| | ||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  47126630 ctcgcgaggcgagagcctctactcaccacgacgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 47126531  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47126530 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 47126441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 10314029 - 10314217
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||| ||||   | ||||||||| | | ||||| ||||||| ||||||||||||||||    
T  10314029 ctcgcgaggcgagagcctctactcgccacagcgagttagggtaaaacactctagaatccattctggctctattccgagttcaaactcattctaaaacttt 10314128  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  10314129 gcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacgaaatcttgcaagctctctg 10314217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 55502553 - 55502364
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  55502553 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 55502454  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  55502453 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 55502364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 150 - 338
Target Start/End: Complemental strand, 31116858 - 31116670
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| | ||||   | ||||||||||| | ||||  ||||||| |||| ||||||||||     
T  31116858 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaacacactctagaatccattctgactctattctgagttcaaactcaatctaaaacttc 31116759  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||||||||||    
T  31116758 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacgcaaaatcttacaagctctctg 31116670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 15279891 - 15279726
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||  ||||    ||||||||| | |  | ||  |||||||||||||||||||||||    
T  15279891 ctcgcgaggcgagagcctctactcgccacgacgagttagggtaaaacgctcaaggatccattctgtctcattcccgggttcaatctcattctaaaacttt 15279792  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  15279791 gcctaatcattaaggtacatgttcaggccctcatgaacatccaaggttaaactcacagctcaaaaa 15279726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 16278046 - 16277955
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  16278046 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtacaatcaagaataacttctgtcctacctcaagggtctactcata 16277955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 53387656 - 53387565
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  53387656 ctaagtcgacgtcattaaacattataaacattctctccgaatctctgtataatcaagaataacttctctcctacctcaagggtctactcata 53387565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 21815149 - 21815072
Alignment:
Q  109 aagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||    
T  21815149 aagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagtt 21815072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 21815478 - 21815401
Alignment:
Q  109 aagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||    
T  21815478 aagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagtt 21815401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 21818571 - 21818494
Alignment:
Q  109 aagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||    
T  21818571 aagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagtt 21818494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 99 - 277
Target Start/End: Complemental strand, 52243049 - 52242872
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatac 198  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||  || |||||||||||||||||| |||||||||| ||||||||||  |||  ||  |    
T  52243049 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactc 52242951  T
Q  199 tcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggc 277  Q
     || || | |||||| | || |||||| |||||||||||||||| ||  || ||| |||||||   |||||||||||||    
T  52242950 ccaacaatgcattcttaaactattccaggttcaatctcattctagaatctttcctgatcattattatacatgttcaggc 52242872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 337
Target Start/End: Complemental strand, 44928779 - 44928542
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaata 197  Q
    ||||||||||| |||||||||||||||||||||  ||||| || |||| || ||||||||||||||| |||| ||||||||||||||||  ||| | ||     
T  44928779 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggtca-ctcgcgaggcgagagcctctgctcgccatggcgagttctggtcagatt 44928682  T
Q  198 ctcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
    | ||   || |||||| | | | ||||| |||||||||||||||| |   || |||||||||||    | |||||||||| |||| |||||   |||| |    
T  44928681 cccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaacatataaggat 44928582  T
Q  298 aaactcacagctcaaaaacacagaatcttgcaagctctct 337  Q
     |||||| |  |||||| ||| ||||||||||||||||||    
T  44928581 caactcaaaagtcaaaatcacggaatcttgcaagctctct 44928542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 282
Target Start/End: Complemental strand, 15464778 - 15464603
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccatt 206  Q
    |||||| ||||||||||||||||| | ||||| ||  || |||||||||||||||||| |||||||||| |||| |||||  |||  || || ||  | |    
T  15464778 aaagattgcaaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaat 15464679  T
Q  207 ccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctca 282  Q
    ||||||| | || ||| || ||||||||||| |||||||  || |||||||||||   ||||| ||||||| ||||    
T  15464678 ccattcttaaactatttcaggttcaatctcaatctaaaatctttcctaatcattattatacatattcaggcactca 15464603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 44102483 - 44102561
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctg-aaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  ||||| |||| || || ||||||||||||||| |||| ||||||||||||||||    
T  44102483 aaagatcgcaaaatcctaaacaagtattctgtaaataggtca-ctcgcgaggcgagagcctctgctcgccatggcgagtt 44102561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 14185345 - 14185403
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaa 127  Q
    ||||||| |||| ||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  14185345 tcctaccccaagagtcgactcataacatcacgtgcgacaaaagatcgcaagaacctaaa 14185403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 192
Target Start/End: Original strand, 16359818 - 16359860
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggta 192  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  16359818 ctcgcgaggcgagagcctctactcgccacggcgagttagggta 16359860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 8846689 - 8846726
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtta 187  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  8846689 ctcgcgaggcgagagcctctactcgccatggcgagtta 8846726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 21189710 - 21189625
Alignment:
Q  33 ctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa 118  Q
    ||||||||| ||| |||||||||  |||||||   | ||||||||||||||| |||||| |  ||||||||||||| |||||||||    
T  21189710 ctctctgaacctctgtataatcattaataactttacccctacctcaagggtcaactcatgttgtcacgtgcgacaacagatcgcaa 21189625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 15099665 - 15099701
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15099665 ctcgcgaggcgagagcctctactcgccatggcgagtt 15099701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 150 - 185
Target Start/End: Original strand, 15190632 - 15190667
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagt 185  Q
    ||||||||||||||| ||||||||||||||||||||    
T  15190632 ctcgcgaggcgagagcctctactcgccatggcgagt 15190667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 17333515 - 17333577
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  17333515 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 17333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 7089190 - 7089227
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  7089190 actcgcgaggcgagagcctctgctcgccatggcgagtt 7089227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 12774313 - 12774350
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagtt 12774350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 17047880 - 17047843
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  17047880 actcgcgaggcgagagcctctgctcgccatggcgagtt 17047843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 3332201 - 3332237
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  3332201 ctcgcgaggcgagagcctctgctcgccatggcgagtt 3332237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 13812614 - 13812578
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  13812614 ctcgcgaggcgagagcctctgctcgccatggcgagtt 13812578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 14852753 - 14852698
Alignment:
Q  77 caagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc 133  Q
    |||||||| ||| ||| |||| ||||||||||| |||||||||| ||||||||||||    
T  14852753 caagggtcaacttataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggc 14852698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22634018 - 22633982
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  22634018 ctcgcgaggcgagagcctctgctcgccatggcgagtt 22633982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 24029057 - 24029093
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  24029057 ctcgcgaggcgagagcctctgctcgccatggcgagtt 24029093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 32306881 - 32306818
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| |||||||||||| ||||||| || |||||||||||    
T  32306881 tcctaccccaagggtcaactcataacatctcgtgcgacaaaa-atcgcaagaaccctaaacaagg 32306818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 319; Significance: 1e-180; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 20579630 - 20579968
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20579630 ctaagtcgacgtcattaaacactacaaacatcctctctgaatctccgtttaatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 20579729  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20579730 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 20579829  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20579830 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 20579929  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20579930 ctcacagctcaaaaacacagaatcttgcaagctctctgc 20579968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 20631631 - 20631820
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  20631631 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 20631730  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20631731 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 20631820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 36181890 - 36182079
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  36181890 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 36181989  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36181990 gcctaatcatgaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 36182079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 22900058 - 22899869
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | ||  |||||||||||||||||||||||    
T  22900058 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgtgttcaatctcattctaaaacttt 22899959  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22899958 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 22899869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 24087730 - 24087918
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| |||||  | ||||||||||| | ||||| |||||||||||| |||||||||||    
T  24087730 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaacttt 24087829  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  24087830 gcctaatcattatagtacatgttcaggctctcataaacatccagggttaaactcacagctcaaaatcacgaaatcttgcaagctctctg 24087918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 45307605 - 45307793
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   ||||||||||||| | ||||  ||||||| |||| |||||||||||    
T  45307605 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagattccattctgactctattctgagttcaaactcaatctaaaacttt 45307704  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||   |||||||||||||||||    
T  45307705 gcctaatcattaaggtacatgttcaggccctcataaacatctaaggttaaactcacagctcaaaatcacgagatcttgcaagctctctg 45307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 14432159 - 14431994
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||| ||  ||||    ||||||||| | |  |||| ||||||||||||||||||||||||    
T  14432159 ctcgcgaggcgagagcctctactcgccacggcgagttagggtataacgctcaaggatccattctgcctcatttccgagttcaatctcattctaaaacttt 14432060  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  14432059 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaa 14431994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 150 - 315
Target Start/End: Original strand, 37358783 - 37358948
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||    ||||||||| | |  | || ||||||||||||||||||||||||    
T  37358783 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaaggatccattctgtctcattcccgagttcaatctcattctaaaacttt 37358882  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||    
T  37358883 gcctaatcattaaggtacatgttcaggccctcataaacatccatggttaaactcgcagctcaaaaa 37358948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 26065174 - 26065291
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| |  ||||||| |||| ||||||||||| |||||||||| |||||||||||  ||||| ||  || |||||||||||||||||| ||    
T  26065174 tcctaccccaaggataaactcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcct 26065272  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||| ||||||||||    
T  26065273 ctactcgctatggcgagtt 26065291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 337
Target Start/End: Original strand, 433272 - 433509
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaata 197  Q
    ||||||||||| |||||||||||||||||||||  || || || |||| || ||||||||||||||| |||| ||||||||||||||||  ||| | ||     
T  433272 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattttgcaactgggtca-ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagatt 433369  T
Q  198 ctcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
    | ||   || |||||| | | | ||||| |||||||||||||||| |   || ||||||||||||   |||||||||| | |||| || || | |||| |    
T  433370 cccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcagacactcaaaagcatctaaggat 433469  T
Q  298 aaactcacagctcaaaaacacagaatcttgcaagctctct 337  Q
     |||||| |  |||||| ||| ||||||||||||||||||    
T  433470 caactcaaaagtcaaaatcacggaatcttgcaagctctct 433509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 12328503 - 12328442
Alignment:
Q  72 tacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||| || |||||||||||    
T  12328503 taccccaagggtcgactcataacatcacgtgcgacaaaagatcgcaagaaacctaaacaagg 12328442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 132
Target Start/End: Original strand, 51327032 - 51327095
Alignment:
Q  70 cctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    |||||| |||||||| ||||||| |||||||||||||||||||| |||| || |||||||||||    
T  51327032 cctaccccaagggtcgactcataacatcacgtgcgacaaaagattgcaagaaacctaaacaagg 51327095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 20637165 - 20637201
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20637165 ctcgcgaggcgagagcctctactcgccatggcgagtt 20637201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 28194336 - 28194218
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaa-atcctaaacaaggc-ttctg-aaatgggacaactcgcgaggcgagagg 165  Q
    ||||||||||| |||| ||||||| |||||||||||||||| |||||||   | |||||||||| | || || |||||||  | |||||||||||||||     
T  28194336 tcctacctcaaaggtcaactcataacatcacgtgcgacaaa-gatcgcatgtaacctaaacaagacattttgtaaatgggt-agctcgcgaggcgagagc 28194239  T
Q  166 ctctactcgccatggcgagtt 186  Q
    ||||||| |||||||||||||    
T  28194238 ctctacttgccatggcgagtt 28194218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 22921672 - 22921637
Alignment:
Q  151 tcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||| |||||||||||||||||||||    
T  22921672 tcgcgaggcgagagcctctactcgccatggcgagtt 22921637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 21754350 - 21754387
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagtt 21754387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 38801199 - 38801162
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagtt 38801162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 20248592 - 20248628
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||| || |||||||||||||||||||||    
T  20248592 ctcgcgaggcgatagcctctactcgccatggcgagtt 20248628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 20918917 - 20918953
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  20918917 ctcgcgaggcgagagcctctgctcgccatggcgagtt 20918953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 35981492 - 35981456
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  35981492 ctcgcgaggcgagagcctctactcaccatggcgagtt 35981456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 315; Significance: 1e-177; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 26496051 - 26496388
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26496051 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 26496150  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26496151 tgcgacaaaagatcgcaaaatcctaa-caaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 26496249  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26496250 accattccattctgacaccattccgagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 26496349  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26496350 ctcacagctcaaaaacacagaatcttgcaagctctctgc 26496388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 29325176 - 29324838
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  29325176 ctaagtcgacgtcattaaacattacagacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctacccatatcatcacg 29325077  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29325076 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaataggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 29324977  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29324976 accattccattctggcaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 29324877  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  29324876 ctcacagctcaaaaacacagaatcttgcaagccctctgc 29324838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 23693772 - 23693961
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||| ||| |||||||| |||||||    
T  23693772 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgactctattccgagtccaaactcattctcaaacttt 23693871  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23693872 tcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 23693961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 22880522 - 22880711
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  22880522 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 22880621  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22880622 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 22880711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 4398022 - 4398210
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||||| |  |||| ||||||||||||||||||||||||    
T  4398022 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 4398121  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  || |||| |||||||||||||    
T  4398122 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaatgcaaaatcgtgcaagctctctg 4398210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 16259373 - 16259184
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | ||  |||||||||||||||||||||||    
T  16259373 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgtgttcaatctcattctaaaacttt 16259274  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16259273 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 16259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 22589537 - 22589348
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | ||  |||||||||||||||||||||||    
T  22589537 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgtgttcaatctcattctaaaacttt 22589438  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22589437 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 22589348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 22593092 - 22592903
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | ||  |||||||||||||||||||||||    
T  22593092 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgtgttcaatctcattctaaaacttt 22592993  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22592992 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 22592903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 22596647 - 22596458
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | ||  |||||||||||||||||||||||    
T  22596647 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgtgttcaatctcattctaaaacttt 22596548  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22596547 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 22596458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 16255740 - 16255551
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| |    | ||  |||||||||||||||||||||||    
T  16255740 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtcttattcccgtgttcaatctcattctaaaacttt 16255641  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16255640 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 16255551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 43121477 - 43121665
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| | ||||   | ||||||||||| | ||||  ||||||| |||| ||||||||||     
T  43121477 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaacacactctagaatccattctgactctattctgagttcaaactcaatctaaaacttc 43121576  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||||||||||    
T  43121577 gcctaatcataaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacgcaaaatcttacaagctctctg 43121665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 43125010 - 43125198
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||| | ||||   | ||||||||||| | ||||  ||||||| |||| ||||||||||     
T  43125010 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaacacactctagaatccattctgactctattctgagttcaaactcaatctaaaacttc 43125109  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||| |||||||||||    
T  43125110 gcctaatcataaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacgcaaaatcttacaagctctctg 43125198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 26360890 - 26360725
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||    | ||||||| | |  | || ||||||||||||||||||||||||    
T  26360890 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaaggattcattctgtctcattcccgagttcaatctcattctaaaacttt 26360791  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26360790 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaa 26360725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 22144315 - 22144401
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||  || |||||||||||||||||| |||||||||| ||||||||||    
T  22144315 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagtt 22144401  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 36154684 - 36154598
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctg-aaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||  ||||| |||| || || ||||||||||||||| |||||||||||||||||||||    
T  36154684 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaaataggtca-ctcgcgaggcgagagcctctactcgccatggcgagtt 36154598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 11581093 - 11581015
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctg-aaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  ||||| ||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  11581093 aaagatcgcaaaatcctaaacaagcattctgtaaatgggtca-ctcgcgaggcgagagcctctgctcgccatggcgagtt 11581015  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 5889063 - 5888945
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaa-atcctaaacaaggc-ttctg-aaatgggacaactcgcgaggcgagagg 165  Q
    ||||||| ||| |||| ||||||| |||||||||||||||| |||||||   | |||||||||||| ||||| |||||||  | |||||||||||||||     
T  5889063 tcctaccccaaaggtcaactcataacatcacgtgcgacaaa-gatcgcatttaacctaaacaaggcattctgtaaatgggt-agctcgcgaggcgagagc 5888966  T
Q  166 ctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||    
T  5888965 ctctactcgccatggcgagtt 5888945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 30615956 - 30616019
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaag 131  Q
    ||||||| || ||||| ||||||| ||||||||||||||||||||||||| || ||||||||||    
T  30615956 tcctaccccatgggtcgactcataacatcacgtgcgacaaaagatcgcaagaaacctaaacaag 30616019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 25576741 - 25576677
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||| ||||| || ||||||| | |||||||||||||| |||||||||| |||||||||||||    
T  25576741 tcctaccccaaggatcaactcataacctcacgtgcgacaaa-gatcgcaaaaccctaaacaaggct 25576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22959339 - 22959303
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22959339 ctcgcgaggcgagagcctctactcgccatggcgagtt 22959303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 25744036 - 25744072
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagtt 25744072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 25574355 - 25574293
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| | |||||||||||||| |||||||||| |||||||||||    
T  25574355 tcctaccccaaggatcaactcataacctcacgtgcgacaaa-gatcgcaaaaccctaaacaagg 25574293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 25575548 - 25575486
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| | |||||||||||||| |||||||||| |||||||||||    
T  25575548 tcctaccccaaggatcaactcataacctcacgtgcgacaaa-gatcgcaaaaccctaaacaagg 25575486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 21501962 - 21501924
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  21501962 aactcgcgaggcgagagcctctactcgctatggcgagtt 21501924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 1096781 - 1096818
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  1096781 actcgcgaggcgagagcctctactcgccgtggcgagtt 1096818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 21731346 - 21731282
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||| |||||||| ||||||| ||||  |||||||||  |||||||||| |||||||||||||    
T  21731346 tcctaccccaagggtcaactcataacatcttgtgcgacaag-gatcgcaaaaccctaaacaaggct 21731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 25421846 - 25421883
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  25421846 actcgcgaggcgagagcctctactcgccgtggcgagtt 25421883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 26011845 - 26011804
Alignment:
Q  145 gacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  26011845 gacaactcgcgaggcgaaggcctctactcgccatggcgagtt 26011804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15441763 - 15441727
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  15441763 ctcgcgaggcgagagtatctactcgccatggcgagtt 15441727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 19660643 - 19660607
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  19660643 ctcgcgaggcgagagcctctgctcgccatggcgagtt 19660607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 21328083 - 21328036
Alignment:
Q  86 actcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  21328083 actcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggct 21328036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 21741345 - 21741313
Alignment:
Q  154 cgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||    
T  21741345 cgaggcgagagcctctactcgccatggcgagtt 21741313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22119998 - 22119962
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  22119998 ctcgcgaggcgagagcctctgctcgccatggcgagtt 22119962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 315; Significance: 1e-177; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 21241611 - 21241274
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21241611 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 21241512  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21241511 tgcgacaaaagatcgcaaaatcctaa-caaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 21241413  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21241412 accattccattctgacaccattccgagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 21241313  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21241312 ctcacagctcaaaaacacagaatcttgcaagctctctgc 21241274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 21239061 - 21238724
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21239061 ctaagtcgacgtcattaaacattacaaacatcctctttgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 21238962  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21238961 tgcgacaaaagatcgcaaaatcctaa-caaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 21238863  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21238862 accattccattctgacaccattccgagttcaatctcattctaaaactttgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 21238763  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21238762 ctcacagctcaaaaacacagaatcttgcaagctctctgc 21238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 24504868 - 24505205
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24504868 ctaagtcgacatcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 24504967  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24504968 tgcgacaaaagatcgcaaaatcctaa-caaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 24505066  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24505067 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 24505166  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||| ||||||||||||||    
T  24505167 ctcacagctcaaaaacacgaaatcatgcaagctctctgc 24505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31506330 - 31506668
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  31506330 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtataatcaagaataacttctcccctacctcatgggtctactcatatcatcacg 31506429  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31506430 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 31506529  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31506530 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 31506629  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||| ||||||||||||||    
T  31506630 ctcacagctcaaaaacacgaaatcatgcaagctctctgc 31506668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 31503764 - 31504102
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  31503764 ctaagtcgacgtcattaaacattataaacatcctctctaaatctccgtataatcaagaataacttctcccctacctcatgggtctactcatatcatcacg 31503863  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31503864 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 31503963  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31503964 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 31504063  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||| ||||||||||||||    
T  31504064 ctcacagctcaaaaacacgaaatcatgcaagctctctgc 31504102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 41684567 - 41684378
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  41684567 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 41684468  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41684467 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 41684378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 44621242 - 44621431
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  44621242 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 44621341  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  44621342 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacaactcaaaaacacagaatcttgcaagctctctgc 44621431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 31756232 - 31756421
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  31756232 ctcgcgaggcgagagcctctactcgccatggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 31756331  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31756332 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 31756421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 161 - 338
Target Start/End: Complemental strand, 12627686 - 12627507
Alignment:
Q  161 agaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcatt 260  Q
    |||| |||||||||||| ||||||||||||||||| |||||  | ||||||||||| | ||| | |||||||||||| ||||||||||| ||||||||||    
T  12627686 agagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctatttcgagttcaatctcagtctaaaactttgcctaatcatt 12627587  T
Q  261 aaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacac--agaatcttgcaagctctctg 338  Q
    |  |||||||||||||| ||||||||||  || ||||||||||||||||||||| |||  | ||||||||||||||||||    
T  12627586 atagtacatgttcaggctctcataaacattcagggttaaactcacagctcaaaatcacgaaaaatcttgcaagctctctg 12627507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 20591041 - 20590950
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| | ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||    
T  20591041 ctaagtcgacgtcattaaacattataaacattctctccgaatctctgtataatcaagaataacttctcttctacctcaagggtctactcata 20590950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 23708474 - 23708388
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||  ||  ||||||| ||||||||| |||||||||| ||||||||||    
T  23708474 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagtt 23708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 23076754 - 23076792
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  23076754 aactcgcgaggcgagagcctctactcgccgtggcgagtt 23076792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 298622 - 298585
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  298622 actcgcgaggcgagagcctctactcgccgtggcgagtt 298585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 18546830 - 18546766
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||| ||||| || ||||||| |||  ||||||||||| |||||||||| |||||||||||||    
T  18546830 tcctaccccaaggatcaactcataacatttcgtgcgacaaa-gatcgcaaaaccctaaacaaggct 18546766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 186
Target Start/End: Original strand, 28406297 - 28406330
Alignment:
Q  153 gcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||| |||||||||||||||||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagtt 28406330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 23071768 - 23071732
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  23071768 ctcgcgaggcgagagcctctgctcgccatggcgagtt 23071732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 23791591 - 23791627
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  23791591 ctcgcgaggcgagagcctctactcgcgatggcgagtt 23791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 311; Significance: 1e-175; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 9336 - 9674
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9336 ctaagtcgacgtcattaaaccttaccaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 9435  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9436 tgcgacaagagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 9535  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9536 accattccattctgacaccattccaagttcaatctcattctaaaacttcgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 9635  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  9636 ctcacagctcaaaaacacagaatcttgcaagctctctgc 9674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 10679 - 10489
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaat-actcaccattccattctgacaccattccaagttcaatctcattctaaaactt 248  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||   | ||||||||||| | ||||| ||||||| |||||||||||||||    
T  10679 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaactt 10580  T
Q  249 tacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579 tgcctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 10489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 7301018 - 7300680
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7301018 ctaagtcgatgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 7300919  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7300918 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagtgtaaaatactc 7300819  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
     ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  7300818 cccattccattctgacaccattccaagttcaatctccttctaaaactttgcctaatcattagggtacatgttcaggccctcataaacacccaaggttgaa 7300719  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7300718 ctcacagctcaaaaacacagaatcttgcaagctctctgc 7300680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 45134861 - 45134523
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  45134861 ctaagtcgacgtcattaaacattacaaacatcctttctgaatctccgtataatcaagaatagcttctctcctacctcaagggtctactcatatcatcacg 45134762  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45134761 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggactactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 45134662  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45134661 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcataaaggtacatgttcaggccctcataaacacccaaggttaaa 45134562  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45134561 ctcacagctcaaaaacacagaatcttgcaagctctctgc 45134523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 6608210 - 6607872
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||    
T  6608210 ctaagtcgacgtcattaaacattataaacatcctctctgaatctccgtataatcaagaataacttctcccctacctcatgggtctactcatatcatcacg 6608111  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6608110 tgcgacaaatgatcgccaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 6608011  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6608010 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 6607911  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  6607910 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 6607872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 6 - 297
Target Start/End: Complemental strand, 21415177 - 21414886
Alignment:
Q  6 tcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacgtgcga 105  Q
    ||||||||||||||||||| | || ||||||||||||||| |||||||||  |||||||  ||||||| ||||||||||  |||||| ||||||||||||    
T  21415177 tcgacgtcattaaacattatatacatcctctctgaatctctgtataatcataaataacttatctcctaactcaagggtcctctcataacatcacgtgcga 21415078  T
Q  106 caaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccat 205  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21415077 caaaagatcgcaaaatcctaaacaaggtttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccat 21414978  T
Q  206 tccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
    |||||| |||  | | ||| ||||||||||||||||| ||  || |||||||||||  || ||| ||||||| |||| ||||| | ||||||    
T  21414977 tccattttgaagctaatccgagttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggtt 21414886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 22059195 - 22059006
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  22059195 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 22059096  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
      ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22059095 gtctaatcattaaggtacatgttcaggccctcataaacacctaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 22059006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 153 - 339
Target Start/End: Original strand, 28854268 - 28854454
Alignment:
Q  153 gcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaactttacc 252  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||  ||||||| |||| ||||||||||| ||    
T  28854268 gcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgactctattctgagttcaaactcaatctaaaactttgcc 28854367  T
Q  253 taatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28854368 taatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 28854454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 17615232 - 17615421
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  ||||  |||||||||||||||||||||||    
T  17615232 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcatttccgtgttcaatctcattctaaaacttt 17615331  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  17615332 gcctaatcattagagtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaacacaaaatcttgcacgctctctgc 17615421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 22145192 - 22145027
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  22145192 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 22145093  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  22145092 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttagactcacagctcaaaaa 22145027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 150 - 338
Target Start/End: Complemental strand, 10829260 - 10829072
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| ||||||||||||  |||||||||||||||| |||||  | ||||||||||| | ||||| |||||||||| | |||||||||||    
T  10829260 ctcgcgaggcgagagcctctactcgccacagcgagttagggtaaaacactcaagaatccattctgactctattccgagttcaatcttagtctaaaacttt 10829161  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
      ||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  10829160 gtctaatcattatagtacatgttcaggctctcataaacatccagggttaaactcacagctcaaaatcacgaaatcttgcaagctctctg 10829072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 24707613 - 24707448
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccatt-ccaagttcaatctcattctaaaactt 248  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | |||||||||| | |||| || |||||||| ||||||||||||||    
T  24707613 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctga-atcattaccgagttcaatatcattctaaaactt 24707515  T
Q  249 tacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
    | |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24707514 tgcctaataaataaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaa 24707448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 22963305 - 22963243
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  22963305 tcctaccccaagggtcaactcataacatctcgtgcgacaaa-gatcgcaaaatcctaaacaagg 22963243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 17086039 - 17085922
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct-tctga-aatgggacaactcgcgaggcgagaggc 166  Q
    |||||||  ||||||| ||||||| |||| ||||||||||| ||||||||||  |||||||||||| ||||| |||| | || |||||||||||||   |    
T  17086039 tcctaccctaagggtcaactcataacatctcgtgcgacaaa-gatcgcaaaactctaaacaaggctgtctgacaatgtg-cagctcgcgaggcgagccac 17085942  T
Q  167 tctactcgccatggcgagtt 186  Q
    ||||||||| ||||||||||    
T  17085941 tctactcgctatggcgagtt 17085922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 23668044 - 23668106
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  23668044 tcctaccccaagggtcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 23668106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 41598457 - 41598535
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  ||||| || | || || ||||||||||||||| |||| ||||||||||||||||    
T  41598457 aaagatcgcaaaatcctaaacaagcattctgtaactaggtca-ctcgcgaggcgagagcctctgctcgccatggcgagtt 41598535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 39834147 - 39834183
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39834147 ctcgcgaggcgagagcctctactcgccatggcgagtt 39834183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 20533294 - 20533232
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| |||| ||||||||||| |||||||||| |||||||||||    
T  20533294 tcctaccccaaggatcaactcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaagg 20533232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 40492738 - 40492676
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||| | |||| ||||||||||| ||||||||||||||||||||||    
T  40492738 tcctaccacaaggatcaactcacaacatctcgtgcgacaaa-gatcgcaaaatcctaaacaagg 40492676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 22253051 - 22252986
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaaggct 134  Q
    ||||||| |||||||| ||||||| ||||||||||||| ||||||||||| || ||||||| |||||    
T  22253051 tcctaccccaagggtcaactcataacatcacgtgcgac-aaagatcgcaagaaccctaaacgaggct 22252986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 20536521 - 20536558
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  20536521 actcgcgaggcgagagcctctactcgccgtggcgagtt 20536558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 21918808 - 21918771
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagtt 21918771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 22525751 - 22525815
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||| ||| | || ||||||| |||| ||||||||||| |||||||||| |||||||||||||    
T  22525751 tcctaccccaatgatcaactcataacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggct 22525815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 23406694 - 23406731
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  23406694 actcgcgaggcgagagcctctactcgccgtggcgagtt 23406731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 5866082 - 5866046
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  5866082 ctcgcgaggcgagagcctctgctcgccatggcgagtt 5866046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 17141229 - 17141265
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  17141229 ctcgcgaggcgagagcctctgctcgccatggcgagtt 17141265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 20498879 - 20498915
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  20498879 ctcgcgaggcgagagcctctactcgctatggcgagtt 20498915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 21249697 - 21249733
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  21249697 ctcgcgaggcgagagcctctgctcgccatggcgagtt 21249733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 37116664 - 37116700
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagtt 37116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 311; Significance: 1e-175; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 8523097 - 8523435
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8523097 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 8523196  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8523197 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 8523296  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8523297 accattccattctgacaccattccaagttcaatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 8523396  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  8523397 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 8523435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 15686056 - 15685718
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    |||||||||||||||||||||||| |||| |||||| || | |||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  15686056 ctaagtcgacgtcattaaacattataaacatcctctttgcacctccgtataatcaagaataacttctatcccacctcaagggtctactcatatcatcacg 15685957  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15685956 tgcgacaaaagatcgcaaaatcctaaacaaggcttcggaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 15685857  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15685856 accattccattctgacaccattccaagttcaatctcattctaaaatcatgcctaatcattaaggtacatgttcaggccctcacaaacacccaaggttaaa 15685757  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  15685756 ctcacagctcaaaaacacaaaatcttgcaagctctctgc 15685718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 16102658 - 16102847
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  16102658 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 16102757  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16102758 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 16102847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 12596272 - 12596461
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||  ||||||| ||||||||||||||||    
T  12596272 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattctgagttcaaactcattctaaaacttt 12596371  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12596372 gcctaatcattaaggtacatgttcaggccctcataaacacctaaggttaaactcacagctcaaaaacacaaaatcttgcaagctctctgc 12596461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 148 - 338
Target Start/End: Original strand, 15539591 - 15539781
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaact 247  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | || || ||||||| ||||||||||||||    
T  15539591 aactcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgactctataccgagttcaaactcattctaaaact 15539690  T
Q  248 ttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
    || | ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||  |||| |||||||||||||    
T  15539691 ttgcataatcattaaggtacatgttcaggcccccataaacacccagggttaaactcacagctaaaaaacacgaaatcatgcaagctctctg 15539781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 16813091 - 16813279
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||||| |  |||| | ||||||||||||||||||||||    
T  16813091 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgactcatttccgaattcaatctcattctaaaacttt 16813190  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |  |||| |||||||||||||    
T  16813191 gcctaatcattatggtacatgttcaggccctcgtaaacatccaaggttaaactcacagctcaaaaatgcgaaatcgtgcaagctctctg 16813279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 16830111 - 16830299
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||  ||||  | ||||||||||| |  |||| ||||||||||||||||||||||||    
T  16830111 ctcgcgaggcgagagcctctactcgccacggcgagttaaggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 16830210  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||  |  |||| |||||||||||||    
T  16830211 gcctaatcattatggtacatgttcaggccctcgtaaacatccaaggttaaactcacagctcaaaaatgcgaaatcgtgcaagctctctg 16830299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 150 - 315
Target Start/End: Original strand, 29493068 - 29493233
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||| | |  | || ||||||||||||||||||||||||    
T  29493068 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgtctcattcccgagttcaatctcattctaaaacttt 29493167  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  29493168 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacaactcaaaaa 29493233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 18456980 - 18457066
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||| || |||||||||||||||||| |||||||||||||||| ||||    
T  18456980 cgtgcgacaaa-gatcgcaaaatcctgaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagtt 18457066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 191
Target Start/End: Original strand, 25644587 - 25644678
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggt 191  Q
    ||||||||||| |||||||||| ||||||||||  ||||||||  || |||||||||||||||| | |||||||||| |||||||||| ||||    
T  25644587 cgtgcgacaaa-gatcgcaaaaacctaaacaagcattctgaaaccgggcaactcgcgaggcgagggcctctactcgctatggcgagttcgggt 25644678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 2287715 - 2287663
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  2287715 aactcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactc 2287663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 4185629 - 4185593
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4185629 ctcgcgaggcgagagcctctactcgccatggcgagtt 4185593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 4668019 - 4667983
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4668019 ctcgcgaggcgagagcctctactcgccatggcgagtt 4667983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 186
Target Start/End: Original strand, 19668672 - 19668724
Alignment:
Q  134 ttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||| ||| ||||| ||||||||||||||| |||||||||| ||||||||||    
T  19668672 ttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagtt 19668724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22080543 - 22080507
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagtt 22080507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 18696722 - 18696784
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  18696722 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 18696784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 20224178 - 20224240
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  20224178 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 20224240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 22118162 - 22118224
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  22118162 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 22118224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 27333089 - 27333054
Alignment:
Q  151 tcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||| |||||||||||||||||||||    
T  27333089 tcgcgaggcgagagcctctactcgccatggcgagtt 27333054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 151 - 186
Target Start/End: Complemental strand, 27393829 - 27393794
Alignment:
Q  151 tcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||| |||||||||||||||||||||    
T  27393829 tcgcgaggcgagagcctctactcgccatggcgagtt 27393794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 186
Target Start/End: Original strand, 19652512 - 19652546
Alignment:
Q  152 cgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||| |||||||||||||||||||||    
T  19652512 cgcgaggcgagagcctctactcgccatggcgagtt 19652546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 23019716 - 23019758
Alignment:
Q  144 ggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| || | |||||||||||||||||||||    
T  23019716 ggacaactcgcgaggcaagggcctctactcgccatggcgagtt 23019758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 4674866 - 4674829
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtta 187  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  4674866 ctcgcgaggcgagagcctctactcgccatgacgagtta 4674829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 28496280 - 28496243
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagtt 28496243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 29808691 - 29808654
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagtt 29808654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 4189271 - 4189307
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  4189271 ctcgcgaggcgagagcctctactcgccatgacgagtt 4189307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 18821626 - 18821590
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagtt 18821590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 21939699 - 21939735
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  21939699 ctcgcgaggcgagagcctctgctcgccatggcgagtt 21939735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 25928594 - 25928630
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  25928594 ctcgcgaggcgagagtatctactcgccatggcgagtt 25928630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 35008465 - 35008501
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  35008465 ctcgcgaggcgagagcctctactcgctatggcgagtt 35008501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 307; Significance: 1e-173; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 54973551 - 54973889
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54973551 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 54973650  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54973651 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 54973750  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54973751 accattccattctgacaccattccaagttcgatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 54973850  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  54973851 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 54973889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 54976161 - 54976499
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54976161 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 54976260  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54976261 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 54976360  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54976361 accattccattctgacaccattccaagttcgatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 54976460  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  54976461 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 54976499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 54978771 - 54979109
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacg 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54978771 ctaagtcgacgtcattaaacattacaaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcatatcatcacg 54978870  T
Q  101 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54978871 tgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaactactc 54978970  T
Q  201 accattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaa 300  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54978971 accattccattctgacaccattccaagttcgatctcattctaaaactttgcctaatcattaaggtatatgttcaggccctcataaacacccaaggttaaa 54979070  T
Q  301 ctcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  54979071 ctcacagctcaaaaacacgaaatcttgcaagctctctgc 54979109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 2034788 - 2034599
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  2034788 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 2034689  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2034688 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 2034599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 2038295 - 2038106
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  2038295 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 2038196  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2038195 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 2038106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Complemental strand, 2042036 - 2041847
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  2042036 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 2041937  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2041936 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 2041847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 14038492 - 14038681
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  14038492 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 14038591  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14038592 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 14038681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 14041960 - 14042149
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  14041960 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 14042059  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14042060 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 14042149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 150 - 339
Target Start/End: Original strand, 39231039 - 39231228
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  39231039 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccattctgaccctattccgagttcaaactcattctaaaacttt 39231138  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 339  Q
     |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39231139 gcctaatcattaaggtacatgttcaggccctcacaaacacctaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctgc 39231228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 150 - 319
Target Start/End: Original strand, 18959209 - 18959378
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||  | ||||||||||| |  |||| ||||||||||||||||||||||||    
T  18959209 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaagaatccattctgactcatttccgagttcaatctcattctaaaacttt 18959308  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacaca 319  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18959309 gcctaatcattaaggtacatgttcaggccctcataaacacctaaggttaaactcacagctcaaaaacaca 18959378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 151 - 338
Target Start/End: Complemental strand, 603445 - 603258
Alignment:
Q  151 tcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttta 250  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||| |||||  | ||||||||||| | ||||| |||||||||||| |||||||||||     
T  603445 tcgcgaggcgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgactctattccgagttcaatctcagtctaaaactttg 603346  T
Q  251 cctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
    |||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||||||||| |||  ||||||||||||||||||    
T  603345 cctaatcattatagtacatgttcaggctctcataaacatccagggttaaactcacagctcaaaatcacgaaatcttgcaagctctctg 603258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 150 - 337
Target Start/End: Complemental strand, 15009963 - 15009776
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||| |||||  | ||||||||||| | ||||  |||||||||||| |||||||||||    
T  15009963 ctcgcgaggcgtgagcctctactcgccacggcgagttagggtaaaacactcaagaatccattctgactctattctgagttcaatctcagtctaaaacttt 15009864  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctct 337  Q
     |||||||||||  |||||||||||||| |||||||||| ||  ||||||||||||||||||||| |||  |||||||||||||||||    
T  15009863 gcctaatcattatagtacatgttcaggctctcataaacatccggggttaaactcacagctcaaaatcacgaaatcttgcaagctctct 15009776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 54047027 - 54047215
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| ||||||||||||   |||||||||| |||| |||||  | ||||||||||  | ||||| ||||  |||||| |||||||||||    
T  54047027 ctcgcgaggcgagagcctctactcgccacaacgagttagggcaaaacactcaagaatccattctgattctattccgagtttgatctcagtctaaaacttt 54047126  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||  |||||||||||||| |||||||||| ||| ||||||||||||||| ||||| |||  ||||||||||||||||||    
T  54047127 gcctaatcattatagtacatgttcaggctctcataaacatccagggttaaactcacagcgcaaaatcacgaaatcttgcaagctctctg 54047215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 10554600 - 10554691
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10554600 ctaagtcgacgtcaataaacattataaacatcctctctgaatctccgtataatcaagaataacttctctcctacctcaagggtctactcata 10554691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 55292360 - 55292269
Alignment:
Q  1 ctaagtcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcata 92  Q
    |||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  55292360 ctaagtcgacgtcattaaacattataaacatcctctctgaatccccgtataatcaagaataacttctctcctacctcaaaggtctactcata 55292269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 53070554 - 53070468
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||||||    
T  53070554 cgtgcgacaaa-gatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagtt 53070468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 186
Target Start/End: Original strand, 42386676 - 42386762
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| | |||||||||||||||||||||||||| ||| || |||||||||||| ||||| |||||||||||||||||||||    
T  42386676 cgtgcgacaaa-gttcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagtt 42386762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 338
Target Start/End: Complemental strand, 17248142 - 17247904
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaata 197  Q
    ||||||||||| ||||||||||| |||||||||  ||||| || |||| || ||||||||||||||| |||| ||||||||||||||||  ||| | ||     
T  17248142 cgtgcgacaaa-gatcgcaaaattctaaacaagcattctgtaactgggtca-ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagatt 17248045  T
Q  198 ctcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
    | ||   || |||||| | | | ||||| |||||||||||||||| |   || |||||||||||    |||||||||||| |||| ||||| | |||| |    
T  17248044 cccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggat 17247945  T
Q  298 aaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||| |  |||||| |||  |||||||||| |||||||    
T  17247944 caactcaaaagtcaaaatcacgaaatcttgcaacctctctg 17247904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 52523583 - 52523497
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| |||||||||||||||||||||  ||||| ||  || |||||||  ||||||| | |||||||||| ||||||||||    
T  52523583 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagtt 52523497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 2051047 - 2050969
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  || || ||  || |||||| ||||||||||| |||||||||| |||| |||||    
T  2051047 aaagatcgcaaaatcctaaacaagcattttgtaactgggcaactcacgaggcgagagcctctactcgctatggagagtt 2050969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 14572902 - 14572939
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||||||||||||||||||||    
T  14572902 actcgcgaggcgagagcctctactcgccatggcgagtt 14572939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 13210133 - 13210097
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcgagtt 13210097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 16800127 - 16800179
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactc 200  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| ||||| ||||    
T  16800127 aactcgcgaggcgagagcctctacttgccacggcgagttaggataaaacactc 16800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 187
Target Start/End: Complemental strand, 23083167 - 23083131
Alignment:
Q  151 tcgcgaggcgagaggctctactcgccatggcgagtta 187  Q
    |||||||||||||| ||||||||||||||||||||||    
T  23083167 tcgcgaggcgagagcctctactcgccatggcgagtta 23083131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 30030152 - 30030192
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagttagg 189  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  30030152 actcgcgaggcgagagcctctgctcgccatggcgagttagg 30030192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 186
Target Start/End: Complemental strand, 37250975 - 37250936
Alignment:
Q  147 caactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  37250975 caactcgcgaggcgagagcctctactcgctatggcgagtt 37250936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 324548 - 324586
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  324548 aactcgcgaggcgagagcctctactcgctatggcgagtt 324586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 1644489 - 1644452
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagtt 1644452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 12269821 - 12269866
Alignment:
Q  88 tcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||    
T  12269821 tcataacatcacgtgcgacaaaagatcgcaagaaacctaaacaagg 12269866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 12934117 - 12934080
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagtt 12934080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 338
Target Start/End: Original strand, 14179708 - 14179825
Alignment:
Q  221 ttccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacag 320  Q
    |||||||||||||||||||||| |   || |||||||||||    |||||||||||| |||| || || | |||||| |||||| |  ||||||| ||      
T  14179708 ttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacga 14179807  T
Q  321 aatcttgcaagctctctg 338  Q
    ||||||||| ||||||||    
T  14179808 aatcttgcatgctctctg 14179825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 32307983 - 32308020
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagtt 32308020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 49667890 - 49667853
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagtt 49667853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 839543 - 839579
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  839543 ctcgcgaggcgagagtatctactcgccatggcgagtt 839579  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 1465215 - 1465179
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  1465215 ctcgcgaggcgagagcctctactcgccatggcaagtt 1465179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 11424569 - 11424533
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagtt 11424533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 12340068 - 12340104
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  12340068 ctcgcgaggcgagagcctctgctcgccatggcgagtt 12340104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 15447651 - 15447587
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    |||||||  |||| || ||||||| ||||| ||||||||||||||||||| || |||||||||||    
T  15447651 tcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaaacctaaacaagg 15447587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 16097645 - 16097681
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  16097645 ctcgcgaggcgagagcctctactcaccatggcgagtt 16097681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 22110156 - 22110120
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagtt 22110120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 28350970 - 28350934
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  28350970 ctcgcgaggcgagagtatctactcgccatggcgagtt 28350934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 6 - 297
Target Start/End: Original strand, 2024 - 2315
Alignment:
Q  6 tcgacgtcattaaacattacaaacgtcctctctgaatctccgtataatcaagaataactactctcctacctcaagggtctactcatatcatcacgtgcga 105  Q
    ||||||||||||||||||| | || ||||||||||||||| |||||||||  |||||||  ||||||||||||||||||  |||||| ||||||||||||    
T  2024 tcgacgtcattaaacattatatacatcctctctgaatctctgtataatcataaataacttatctcctacctcaagggtcctctcataacatcacgtgcga 2123  T
Q  106 caaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccat 205  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  2124 caaaagatcgcaaaatcctaaacaaggtttctgtaattggacaactcacgaggcgagagcctttactcgccatggcgagttagggtaaaatactcaccat 2223  T
Q  206 tccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
    |||||| |||  | | ||| ||||||||||||||||| ||  || |||||||||||  || ||| ||||||| |||| ||||| | ||||||    
T  2224 tccattttgaagctaatccgagttcaatctcattctacaatctttcctaatcattagtgtgcatcttcaggcactcaaaaacatctaaggtt 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 150 - 338
Target Start/End: Complemental strand, 8298 - 8110
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||||||| |||||  | ||||||||||||| ||||||||||||||||||||||||||| ||    
T  8298 ctcgcgaggtgagagcctctactcgccacggcgatttagggtaaaacactcaagaatccattctgacactattccaagttcaatctcattctaaaacctt 8199  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||  ||||||||||||||||||    
T  8198 gcctaatcattattgtacatgttcaggccctcataaacatccaaggttaaactcacaactcaaaatcacgaaatcttgcaagctctctg 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 150 - 338
Target Start/End: Original strand, 33461 - 33649
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  33461 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 33560  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  33561 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacaaaatcttacaagctctctg 33649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 150 - 338
Target Start/End: Complemental strand, 81351 - 81163
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||| ||||   | |||| |||||| | ||||  ||||||| |||| ||||||||||     
T  81351 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacactctagaatccaatctgactctattctgagttcaaactcaatctaaaacttc 81252  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  81251 gcctaatcattaaggtacatgttcaggccctcataaacacccaaagttaaactcacagctcaaaaacacaaaatcttacaagctctctg 81163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 150 - 315
Target Start/End: Complemental strand, 133776 - 133611
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||  ||||    ||||||||| | |  | || ||||||||||||||||||||||||    
T  133776 ctcgcgaggcgagagcctctactcgccacggcgagttagggtaaaacgctcaaggatccattctgcctcattcccgagttcaatctcattctaaaacttt 133677  T
Q  250 acctaatcattaaggtacatgttcaggccctcataaacacccaaggttaaactcacagctcaaaaa 315  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  133676 gcctaatcattaaggtacatgttcaggccctcataaacatccaaggttaaactcacagctcaaaaa 133611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 136178 - 136136
Alignment:
Q  144 ggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  136178 ggacaactcgcgaggcgagagcctctactcgctatggcgagtt 136136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 144886 - 144844
Alignment:
Q  144 ggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  144886 ggacaactcgcgaggcgagagcctctactcgctatggcgagtt 144844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 79185 - 79107
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccat 178  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||    
T  79185 cgtgcgacaaa-gatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 12202 - 12280
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||| |||||||| ||| || |||||||||||| ||||| |||||||||||||||||||||    
T  12202 aaagatcgcaaaatcctaaacagggcttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagtt 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 186
Target Start/End: Complemental strand, 20281 - 20195
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||| || ||||||||||||||||||||||||| |||  | ||||| |||||||||||| |||||||||||||||||||||    
T  20281 cgtgcgacaaa-gaccgcaaaatcctaaacaaggcttctgtaattaggcaacttgcgaggcgagagcctctactcgccatggcgagtt 20195  T

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Target: scaffold0839 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 338
Target Start/End: Complemental strand, 1933 - 1696
Alignment:
Q  99 cgtgcgacaaaagatcgcaaaatcctaaacaaggcttctgaaa-tgggacaactcgcgaggcgagaggctctactcgccatggcgagttagggtaaaata 197  Q
    ||||||||||| |||||||||||||||||||||  ||||| || |||| || ||||||||||||||| |||| ||||||||||||| ||  ||| | ||     
T  1933 cgtgcgacaaa-gatcgcaaaatcctaaacaagcattctgtaactgggtca-ctcgcgaggcgagagcctctgctcgccatggcgaattcaggtcagatt 1836  T
Q  198 ctcaccattccattctgacaccattccaagttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaacacccaaggtt 297  Q
      ||   || |||||| | | | ||||| |||||||||||||||| |   || |||||||||||    |||||||||||| |||| ||||| | |||| |    
T  1835 tccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactca-aaacatctaaggat 1737  T
Q  298 aaactcacagctcaaaaacacagaatcttgcaagctctctg 338  Q
     |||||| |  |||||| |||||||||||||||||||||||    
T  1736 caactcaaaagtcaaaatcacagaatcttgcaagctctctg 1696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 15947 - 15868
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||||||||||||| ||||| ||  || |||||||||||||||| | || ||||||| ||||||||||    
T  15947 aaagatcgcaaaatcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagtt 15868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 186
Target Start/End: Original strand, 13382 - 13482
Alignment:
Q  86 actcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc-ttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcgag 184  Q
    ||||||| || | ||||||||||| ||||||||||||||||||||||| ||||| ||   | ||||||  |||||||| | || ||||||| ||||||||    
T  13382 actcataacaactcgtgcgacaaa-gatcgcaaaatcctaaacaaggcattctgtaactaggcaactcatgaggcgagggcctatactcgctatggcgag 13480  T
Q  185 tt 186  Q
    ||    
T  13481 tt 13482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 17053 - 17131
Alignment:
Q  108 aaagatcgcaaaatcctaaacaaggcttctg-aaatgggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||||||  ||||| |||| || || ||||||||||||||| |||| ||||||||||||||||    
T  17053 aaagatcgcaaaatcctaaacaagtattctgtaaataggtca-ctcgcgaggcgagagcctctgctcgccatggcgagtt 17131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 60600 - 60483
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggc-ttctgaaa-tgggacaactcgcgaggcgagaggc 166  Q
    ||||||| ||||| || ||||||| |||| ||||||||||| |||| ||||| ||||||||| |  ||||| || ||||| ||||||||||||||||| |    
T  60600 tcctaccccaaggttcaactcataacatctcgtgcgacaaa-gatcacaaaaccctaaacaatgtattctgtaactggga-aactcgcgaggcgagagcc 60503  T
Q  167 tctactcgccatggcgagtt 186  Q
    ||||||||| ||||||||||    
T  60502 tctactcgctatggcgagtt 60483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 130222 - 130258
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  130222 ctcgcgaggcgagagcctctgctcgccatggcgagtt 130258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 29309 - 29247
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg 132  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||||||| |||||||||||    
T  29309 tcctaccccaagggtcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaagg 29247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 24483 - 24366
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaac-aaggcttctgaaatgggacaactcgcgaggcgagaggct 167  Q
    ||||||| ||||| || ||||||| |||| |||||||| ||||||||||||| ||||||| |||  ||||| ||| || || |||||||||||||   ||    
T  24483 tcctaccccaaggatcaactcataacatctcgtgcgac-aaagatcgcaaaaacctaaacaaagtattctgcaattgggcagctcgcgaggcgagtcact 24385  T
Q  168 ctactcgccatggcgagtt 186  Q
    |||||||  ||||||||||    
T  24384 ctactcgttatggcgagtt 24366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 3830 - 3894
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaaggct 134  Q
    ||||||||||||| || ||||||| |||| |||| |||||| |||||||||| |||||||||||||    
T  3830 tcctacctcaaggatcaactcataacatctcgtgtgacaaa-gatcgcaaaaccctaaacaaggct 3894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 2609 - 2572
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||||||||||||||||||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagtt 2572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 55570 - 55510
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaa 130  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||||||| |||||||||    
T  55570 tcctaccccaagggtcaactcataacatctcgtgcgac-aaagatcgcaaaaccctaaacaa 55510  T

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Target: scaffold0475 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 9391 - 9427
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  9391 ctcgcgaggcgagagcctctactcgccatggcgagtt 9427  T

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Target: scaffold0125 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 45596 - 45560
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45596 ctcgcgaggcgagagcctctactcgccatggcgagtt 45560  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 282
Target Start/End: Original strand, 32851 - 32983
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagttagggtaaaatactcaccattccattctgacaccattccaagttcaatctcattctaaaacttt 249  Q
    ||||||||||||| | |||||||||||||||||||||  |||  ||  | ||  | |||||||| | || |||||||||||||||||| |||| ||  ||    
T  32851 ctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttagactattccaagttcaatctcaatctagaatctt 32950  T
Q  250 acctaatcattaaggtacatgttcaggccctca 282  Q
     |||||||||||    |||||||||||| ||||    
T  32951 tcctaatcattattacacatgttcaggcactca 32983  T

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Target: scaffold0556 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 8325 - 8367
Alignment:
Q  144 ggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||| | ||| |||||||||||||||||    
T  8325 ggacaactcgcgaggcgagggcctccactcgccatggcgagtt 8367  T

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Target: scaffold0556; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 7126 - 7162
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  7126 ctcgcaaggcgagagcctctactcgccatggcgagtt 7162  T

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Target: scaffold0555 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 10352 - 10310
Alignment:
Q  144 ggacaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||||||| ||||||||||  |||||||||    
T  10352 ggacaactcgcgaggcgagagcctctactcgctttggcgagtt 10310  T

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Target: scaffold0507 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 7865 - 7827
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  7865 aactcgcgaggcgagagcctctactcgctatggcgagtt 7827  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 10841 - 10879
Alignment:
Q  148 aactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  10841 aactcgcgaggcgagagcctctactcgctatggcgagtt 10879  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 85780 - 85873
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaaaatcctaaacaagg-cttctgaaatgggacaactcgcgaggcgag 162  Q
    ||||||| ||||| || |||| || |||| ||||||||||| |||||||||| |||||||||||  ||||||||  || || |||||||||||||    
T  85780 tcctaccccaaggatcaactcgtaacatctcgtgcgacaaa-gatcgcaaaaccctaaacaaggtattctgaaactgggcagctcgcgaggcgag 85873  T

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Target: scaffold1984 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 444 - 481
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  444 actcgcgaggcgagagcctctgctcgccatggcgagtt 481  T

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Target: scaffold0476 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 288
Target Start/End: Original strand, 13235 - 13296
Alignment:
Q  227 gttcaatctcattctaaaactttacctaatcattaaggtacatgttcaggccctcataaaca 288  Q
    ||||||||||| |||||||  || |||||||||||   ||||||||||||| ||||||||||    
T  13235 gttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcactcataaaca 13296  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 16407 - 16370
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  16407 actcgcgaggcgagagcctctgctcgccatggcgagtt 16370  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Complemental strand, 28616 - 28579
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagtt 28579  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 40226 - 40263
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  40226 actcgcgaggcgagagcctctactcgccgtggcgagtt 40263  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 132967 - 133004
Alignment:
Q  149 actcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagtt 133004  T

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Target: scaffold1419 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 338 - 374
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||| | |||||||||||||||||||||    
T  338 ctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 344 - 380
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  344 ctcgcgaggcgagagcctctgctcgccatggcgagtt 380  T

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Target: scaffold0261 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 15974 - 16010
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  15974 ctcgcgaggcgagagcctctgctcgccatggcgagtt 16010  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 10474 - 10510
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  10474 ctcgcgaggcgagagtatctactcgccatggcgagtt 10510  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 14349 - 14313
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    |||||||||||||||  ||||||||||||||||||||    
T  14349 ctcgcgaggcgagagtatctactcgccatggcgagtt 14313  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 10226 - 10262
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  10226 ctcgcgaggcgagagcctctgctcgccatggcgagtt 10262  T

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Target: scaffold0165 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 27528 - 27488
Alignment:
Q  146 acaactcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  27528 acaactcgcgaggcgagggcctctactcgctatggcgagtt 27488  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 2250 - 2214
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  2250 ctcgcgaggcgagagcctctgctcgccatggcgagtt 2214  T

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Target: scaffold0139 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 38634 - 38670
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  38634 ctcgcgaggcgagagcctctactcgctatggcgagtt 38670  T

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Target: scaffold0138 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 13255 - 13291
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||| | |||||||||||||||||||||    
T  13255 ctcgcgaggcgagggcctctactcgccatggcgagtt 13291  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 24456 - 24420
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  24456 ctcgcgaggcgagagcctctgctcgccatggcgagtt 24420  T

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Target: scaffold0075 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 8099 - 8063
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  8099 ctcgcgaggcgagagcctctgctcgccatggcgagtt 8063  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 14541 - 14605
Alignment:
Q  69 tcctacctcaagggtctactcatatcatcacgtgcgacaaaagatcgcaa-aatcctaaacaagg 132  Q
    |||||||  |||| || ||||||| ||||| ||||||||||||||||||| || |||||||||||    
T  14541 tcctaccctaaggatcaactcataacatcatgtgcgacaaaagatcgcaagaaacctaaacaagg 14605  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 59308 - 59272
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  59308 ctcgcgaggcgagagcctctgctcgccatggcgagtt 59272  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 128775 - 128739
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagtt 128739  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 15636 - 15600
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||| | |||||||||||||||||||||    
T  15636 ctcgcgaggcgagggcctctactcgccatggcgagtt 15600  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 207324 - 207288
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  207324 ctcgcgaggcgagagcctctgctcgccatggcgagtt 207288  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 97321 - 97357
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  97321 ctcgcgaggcgagagcctctactcgctatggcgagtt 97357  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 106599 - 106635
Alignment:
Q  150 ctcgcgaggcgagaggctctactcgccatggcgagtt 186  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  106599 ctcgcgaggcgagagcctctactcgctatggcgagtt 106635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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