View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12457_high_1 (Length: 421)
Name: NF12457_high_1
Description: NF12457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12457_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 385; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Complemental strand, 36730850 - 36730433
Alignment:
| Q |
1 |
ccaaactccaaacacataaaccataacaacaa----tgccacaaaattcaaaacctaacatcacgggtaggtgtcatatgaacatatcataatgcaaggt |
96 |
Q |
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|||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36730850 |
ccaaactccaaatacataaaccataacaacaaacaatgacacaaaattcaaaacctaacatcacgggtaggtgtcatatgaacatatcataatgcaaggt |
36730751 |
T |
|
| Q |
97 |
aataacagtagtactacttttattttcctaaacaacatttatcttatatggtaaatgcaataatcataaaacttaaaaaggattaaaacaagtaacaggg |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36730750 |
aataacagtagtactacttttattttcctaaacaacatttatcttatacggtaaatgcaataatcataaaacttaaaaaggattaaaacaagtaacaggg |
36730651 |
T |
|
| Q |
197 |
taacaaactagaggttttgccaatccagcagaaaatgacgacccttcttccatatcaatcttatcaccacctttaattttccattcaaaacattgaatca |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36730650 |
taacaaactagaggttttgccaatccagcagaaaatgacgacccttcttccatatcaatcttatcaccacctttaattttccattcaaaacattgaatca |
36730551 |
T |
|
| Q |
297 |
atccagcaattgtcaaatgtataaccgttaaagcaagtgatgaaccaggacaacccctcctaccaaatccaaatggaatatacctaaaatcatcaccatc |
396 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36730550 |
atccagcaattgtcaaatgtataaccgttaaagcaagtgatgaaccaggacaacccctcctaccaaatccaaatggaatatacctaaaatcatcaccatc |
36730451 |
T |
|
| Q |
397 |
cattttattcacaggttc |
414 |
Q |
| |
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||||||||||||| |||| |
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| T |
36730450 |
cattttattcacatgttc |
36730433 |
T |
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