View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1245_high_35 (Length: 297)

Name: NF1245_high_35
Description: NF1245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1245_high_35
NF1245_high_35
[»] chr7 (63 HSPs)
chr7 (193-281)||(11852154-11852242)
chr7 (40-128)||(4514759-4514847)
chr7 (39-129)||(2650884-2650974)
chr7 (40-129)||(26577260-26577348)
chr7 (64-129)||(47523706-47523771)
chr7 (64-127)||(40847493-40847556)
chr7 (39-129)||(1824256-1824346)
chr7 (55-129)||(24605847-24605921)
chr7 (40-129)||(3872243-3872332)
chr7 (40-129)||(3904534-3904623)
chr7 (64-129)||(23232057-23232122)
chr7 (64-129)||(36636524-36636589)
chr7 (68-128)||(816248-816308)
chr7 (65-128)||(11852027-11852090)
chr7 (64-129)||(1907373-1907438)
chr7 (64-129)||(15014461-15014526)
chr7 (64-129)||(21917390-21917455)
chr7 (68-129)||(22486416-22486477)
chr7 (64-129)||(23577245-23577310)
chr7 (64-129)||(27806036-27806101)
chr7 (64-129)||(28800896-28800961)
chr7 (64-129)||(31425567-31425632)
chr7 (64-129)||(33427708-33427773)
chr7 (64-129)||(39979680-39979745)
chr7 (64-128)||(2457688-2457752)
chr7 (64-128)||(10050893-10050957)
chr7 (64-128)||(15969802-15969866)
chr7 (65-128)||(31042270-31042333)
chr7 (65-127)||(22501613-22501675)
chr7 (64-129)||(1842912-1842977)
chr7 (64-129)||(7733368-7733433)
chr7 (64-129)||(11036525-11036590)
chr7 (64-129)||(20174038-20174103)
chr7 (40-129)||(21623015-21623104)
chr7 (40-129)||(23539226-23539315)
chr7 (64-129)||(45664786-45664851)
chr7 (65-129)||(38057651-38057715)
chr7 (40-117)||(2093430-2093507)
chr7 (64-129)||(18217847-18217912)
chr7 (64-129)||(20429483-20429548)
chr7 (64-129)||(37135341-37135406)
chr7 (64-129)||(42926476-42926541)
chr7 (64-128)||(23750793-23750857)
chr7 (70-129)||(48933160-48933219)
chr7 (64-129)||(6849267-6849332)
chr7 (60-129)||(14786691-14786760)
chr7 (64-125)||(20924018-20924079)
chr7 (64-129)||(24140468-24140533)
chr7 (64-127)||(9698596-9698659)
chr7 (71-126)||(27304895-27304950)
chr7 (64-129)||(23699881-23699946)
chr7 (85-129)||(21871607-21871651)
chr7 (65-129)||(25777168-25777232)
chr7 (65-129)||(32267366-32267430)
chr7 (55-129)||(11890203-11890277)
chr7 (70-128)||(15330262-15330320)
chr7 (64-129)||(36993838-36993903)
chr7 (54-129)||(1822049-1822124)
chr7 (78-129)||(1841838-1841889)
chr7 (65-128)||(26415443-26415506)
chr7 (65-130)||(27130353-27130416)
chr7 (76-105)||(5235420-5235449)
chr7 (69-117)||(10222697-10222745)
[»] chr5 (56 HSPs)
chr5 (40-127)||(25397846-25397933)
chr5 (39-129)||(10494730-10494820)
chr5 (40-129)||(746924-747013)
chr5 (40-129)||(38837727-38837816)
chr5 (40-123)||(40484038-40484121)
chr5 (64-129)||(618312-618377)
chr5 (40-129)||(16631930-16632019)
chr5 (64-129)||(17039687-17039752)
chr5 (64-129)||(33818617-33818682)
chr5 (55-129)||(5982654-5982728)
chr5 (39-129)||(17772024-17772114)
chr5 (65-123)||(27428074-27428132)
chr5 (64-129)||(2472770-2472835)
chr5 (40-129)||(4125244-4125333)
chr5 (64-129)||(16121895-16121960)
chr5 (64-129)||(23423812-23423877)
chr5 (64-129)||(35620399-35620464)
chr5 (40-129)||(36597396-36597485)
chr5 (64-129)||(8886907-8886972)
chr5 (64-129)||(23975653-23975718)
chr5 (64-129)||(26708641-26708706)
chr5 (64-129)||(26978375-26978440)
chr5 (64-129)||(33816814-33816879)
chr5 (69-125)||(25673288-25673344)
chr5 (55-129)||(7888806-7888880)
chr5 (64-129)||(8108916-8108981)
chr5 (68-129)||(11927842-11927903)
chr5 (64-129)||(12328282-12328347)
chr5 (64-129)||(15060991-15061056)
chr5 (64-129)||(23408998-23409063)
chr5 (64-129)||(28265531-28265596)
chr5 (64-129)||(36196412-36196477)
chr5 (64-128)||(13620184-13620248)
chr5 (65-129)||(17036468-17036532)
chr5 (65-129)||(20959527-20959591)
chr5 (64-128)||(24138898-24138962)
chr5 (66-125)||(17079425-17079484)
chr5 (64-127)||(17986747-17986810)
chr5 (53-128)||(35778148-35778223)
chr5 (64-129)||(12045745-12045810)
chr5 (64-129)||(25652639-25652704)
chr5 (64-129)||(36716256-36716321)
chr5 (65-129)||(10420308-10420372)
chr5 (65-129)||(31853144-31853208)
chr5 (65-125)||(32726786-32726846)
chr5 (40-103)||(16464672-16464735)
chr5 (70-129)||(33735029-33735088)
chr5 (64-129)||(7003786-7003849)
chr5 (55-128)||(3080753-3080826)
chr5 (64-129)||(36831946-36832011)
chr5 (41-123)||(9024208-9024291)
chr5 (64-107)||(13974156-13974199)
chr5 (65-108)||(22649406-22649449)
chr5 (79-129)||(20187997-20188047)
chr5 (65-103)||(29727928-29727966)
chr5 (79-128)||(23974633-23974682)
[»] chr8 (61 HSPs)
chr8 (40-129)||(32247901-32247990)
chr8 (38-129)||(25273383-25273474)
chr8 (40-128)||(26399064-26399151)
chr8 (40-129)||(19493711-19493801)
chr8 (40-129)||(13060987-13061076)
chr8 (64-129)||(17103921-17103986)
chr8 (64-129)||(17824672-17824737)
chr8 (40-129)||(5670225-5670314)
chr8 (40-129)||(11938737-11938826)
chr8 (64-129)||(27869254-27869319)
chr8 (64-128)||(3823149-3823213)
chr8 (40-128)||(23752343-23752431)
chr8 (54-129)||(31399564-31399639)
chr8 (39-129)||(19488117-19488207)
chr8 (64-129)||(8555360-8555425)
chr8 (64-129)||(18010116-18010181)
chr8 (40-129)||(25655914-25656003)
chr8 (65-129)||(24576080-24576144)
chr8 (64-129)||(4330994-4331059)
chr8 (40-129)||(8824817-8824906)
chr8 (64-129)||(17810314-17810379)
chr8 (64-129)||(19240883-19240948)
chr8 (64-129)||(19256228-19256293)
chr8 (64-129)||(19314067-19314132)
chr8 (64-129)||(22939329-22939394)
chr8 (40-129)||(24636644-24636733)
chr8 (64-129)||(27910820-27910885)
chr8 (64-129)||(27957239-27957304)
chr8 (64-129)||(33652583-33652648)
chr8 (64-128)||(6816440-6816504)
chr8 (55-127)||(37992106-37992178)
chr8 (54-128)||(15289650-15289722)
chr8 (54-128)||(15470019-15470091)
chr8 (78-129)||(30687966-30688017)
chr8 (64-129)||(16061995-16062060)
chr8 (64-129)||(21350494-21350559)
chr8 (64-129)||(24193252-24193317)
chr8 (64-129)||(29350939-29351004)
chr8 (64-129)||(43431615-43431680)
chr8 (81-129)||(8789873-8789921)
chr8 (64-128)||(40289478-40289541)
chr8 (40-110)||(10917819-10917889)
chr8 (64-129)||(4647811-4647876)
chr8 (60-117)||(15251614-15251671)
chr8 (40-129)||(25000487-25000576)
chr8 (40-129)||(30467010-30467099)
chr8 (58-111)||(33413044-33413097)
chr8 (76-128)||(21219297-21219349)
chr8 (65-127)||(29345088-29345150)
chr8 (64-129)||(5879220-5879285)
chr8 (64-129)||(6817070-6817135)
chr8 (64-113)||(9915112-9915161)
chr8 (68-129)||(18844600-18844661)
chr8 (64-129)||(32961675-32961740)
chr8 (40-129)||(41527756-41527845)
chr8 (65-112)||(31344245-31344292)
chr8 (78-124)||(6084305-6084351)
chr8 (68-129)||(9631423-9631485)
chr8 (55-128)||(16784031-16784104)
chr8 (68-109)||(24479874-24479915)
chr8 (65-129)||(3692227-3692291)
[»] chr6 (72 HSPs)
chr6 (40-129)||(5192245-5192334)
chr6 (40-129)||(11077643-11077732)
chr6 (40-129)||(12499210-12499299)
chr6 (40-129)||(12506539-12506628)
chr6 (40-129)||(12509602-12509691)
chr6 (60-129)||(18033581-18033650)
chr6 (64-129)||(2992633-2992698)
chr6 (64-129)||(9892981-9893046)
chr6 (64-129)||(22579405-22579470)
chr6 (64-129)||(28364929-28364994)
chr6 (40-129)||(33547540-33547629)
chr6 (42-129)||(5360405-5360492)
chr6 (65-128)||(12845022-12845085)
chr6 (54-129)||(14872127-14872202)
chr6 (55-129)||(13145011-13145085)
chr6 (64-129)||(6598482-6598547)
chr6 (64-129)||(11049807-11049872)
chr6 (64-129)||(22083856-22083921)
chr6 (64-129)||(23281804-23281869)
chr6 (64-129)||(25398020-25398085)
chr6 (64-129)||(26939605-26939670)
chr6 (64-129)||(27705440-27705505)
chr6 (64-128)||(12951726-12951790)
chr6 (65-128)||(21691553-21691616)
chr6 (55-129)||(14886570-14886644)
chr6 (60-129)||(343619-343688)
chr6 (64-129)||(495683-495748)
chr6 (64-129)||(1939298-1939363)
chr6 (40-129)||(6605552-6605641)
chr6 (64-129)||(15364514-15364579)
chr6 (40-117)||(20692879-20692955)
chr6 (64-129)||(24661065-24661130)
chr6 (64-129)||(26224446-26224511)
chr6 (64-129)||(33250764-33250829)
chr6 (69-129)||(6978300-6978360)
chr6 (64-115)||(21140957-21141008)
chr6 (66-128)||(18492389-18492451)
chr6 (55-129)||(21990230-21990304)
chr6 (64-129)||(12200712-12200777)
chr6 (40-129)||(15448379-15448468)
chr6 (40-125)||(15961467-15961552)
chr6 (64-129)||(20182163-20182228)
chr6 (64-129)||(22153763-22153828)
chr6 (57-129)||(19175833-19175905)
chr6 (64-128)||(27796891-27796955)
chr6 (78-129)||(2669341-2669392)
chr6 (61-123)||(17919551-17919613)
chr6 (40-129)||(3673189-3673278)
chr6 (54-127)||(11350190-11350263)
chr6 (64-129)||(14036638-14036703)
chr6 (76-129)||(14772691-14772744)
chr6 (40-129)||(28668094-28668183)
chr6 (56-128)||(6065447-6065519)
chr6 (61-129)||(10929553-10929621)
chr6 (65-129)||(12351642-12351706)
chr6 (64-128)||(18048806-18048870)
chr6 (65-128)||(12205242-12205305)
chr6 (65-128)||(12680241-12680304)
chr6 (71-129)||(9060115-9060173)
chr6 (55-128)||(9885252-9885325)
chr6 (40-129)||(10458758-10458847)
chr6 (55-108)||(11530234-11530287)
chr6 (64-129)||(12160903-12160967)
chr6 (76-129)||(15509186-15509239)
chr6 (64-129)||(16250858-16250923)
chr6 (64-129)||(22055668-22055733)
chr6 (64-129)||(30834016-30834081)
chr6 (55-125)||(16118155-16118225)
chr6 (65-117)||(5270411-5270463)
chr6 (56-125)||(30745779-30745846)
chr6 (76-125)||(12157436-12157485)
chr6 (80-128)||(11431698-11431745)
[»] chr4 (59 HSPs)
chr4 (40-129)||(38645742-38645831)
chr4 (39-128)||(9059009-9059098)
chr4 (40-129)||(9670535-9670624)
chr4 (40-129)||(14944738-14944827)
chr4 (64-129)||(25147737-25147802)
chr4 (40-129)||(29625317-29625406)
chr4 (40-129)||(30507979-30508068)
chr4 (40-129)||(38619839-38619928)
chr4 (64-128)||(22156658-22156722)
chr4 (43-129)||(313582-313668)
chr4 (64-129)||(2275734-2275799)
chr4 (64-129)||(5399625-5399690)
chr4 (55-128)||(9239338-9239411)
chr4 (40-129)||(13028872-13028961)
chr4 (55-128)||(19839186-19839259)
chr4 (64-129)||(37378679-37378744)
chr4 (64-129)||(55309269-55309334)
chr4 (64-128)||(22128369-22128433)
chr4 (55-129)||(1638454-1638528)
chr4 (54-128)||(12105989-12106062)
chr4 (40-129)||(4586814-4586903)
chr4 (40-129)||(7112002-7112091)
chr4 (64-129)||(27040081-27040146)
chr4 (64-129)||(32175793-32175858)
chr4 (64-129)||(33914075-33914140)
chr4 (67-128)||(36689696-36689757)
chr4 (64-129)||(46286285-46286350)
chr4 (64-128)||(8878899-8878963)
chr4 (40-128)||(25026549-25026637)
chr4 (55-115)||(37761912-37761972)
chr4 (55-129)||(5473856-5473930)
chr4 (64-114)||(18051855-18051905)
chr4 (54-127)||(4606887-4606960)
chr4 (40-129)||(18714894-18714983)
chr4 (64-129)||(19680480-19680545)
chr4 (64-129)||(22168284-22168349)
chr4 (40-129)||(42055389-42055478)
chr4 (41-129)||(6553797-6553885)
chr4 (65-129)||(9913275-9913339)
chr4 (66-129)||(24682383-24682446)
chr4 (68-129)||(44783502-44783564)
chr4 (40-129)||(9238681-9238770)
chr4 (64-129)||(30568055-30568120)
chr4 (39-112)||(45091265-45091338)
chr4 (64-129)||(45532635-45532700)
chr4 (40-129)||(54539278-54539367)
chr4 (65-129)||(3613012-3613076)
chr4 (64-108)||(18744147-18744191)
chr4 (65-129)||(30269044-30269108)
chr4 (65-129)||(30283081-30283145)
chr4 (65-125)||(38223527-38223587)
chr4 (68-123)||(12071982-12072037)
chr4 (64-127)||(13564973-13565036)
chr4 (64-128)||(16915385-16915449)
chr4 (71-127)||(23104371-23104427)
chr4 (76-124)||(25225127-25225175)
chr4 (64-128)||(29238439-29238503)
chr4 (40-129)||(4627134-4627223)
chr4 (68-128)||(39234962-39235020)
[»] chr3 (86 HSPs)
chr3 (40-129)||(15064048-15064137)
chr3 (40-129)||(23773467-23773556)
chr3 (40-129)||(26098803-26098892)
chr3 (41-129)||(50665692-50665780)
chr3 (39-130)||(5744405-5744496)
chr3 (39-130)||(5781364-5781455)
chr3 (40-129)||(13921315-13921404)
chr3 (39-129)||(1745543-1745633)
chr3 (39-129)||(17269660-17269750)
chr3 (60-129)||(10941721-10941790)
chr3 (40-129)||(13905094-13905183)
chr3 (64-129)||(16299875-16299940)
chr3 (64-129)||(19610352-19610417)
chr3 (64-129)||(25882584-25882649)
chr3 (64-129)||(27449102-27449167)
chr3 (40-129)||(48404850-48404939)
chr3 (41-128)||(46012785-46012872)
chr3 (64-129)||(5260951-5261016)
chr3 (64-129)||(11837270-11837335)
chr3 (64-129)||(17582357-17582422)
chr3 (64-129)||(18091603-18091668)
chr3 (64-129)||(18104586-18104651)
chr3 (40-129)||(21816711-21816800)
chr3 (39-128)||(23233220-23233309)
chr3 (40-129)||(28859581-28859670)
chr3 (64-129)||(29216006-29216071)
chr3 (40-129)||(43329819-43329908)
chr3 (40-128)||(5565712-5565800)
chr3 (64-128)||(7623588-7623652)
chr3 (65-129)||(23217264-23217328)
chr3 (64-128)||(28389987-28390051)
chr3 (64-128)||(36543763-36543827)
chr3 (39-128)||(21088740-21088830)
chr3 (68-129)||(1311015-1311076)
chr3 (40-129)||(3461366-3461455)
chr3 (64-129)||(8428185-8428250)
chr3 (76-129)||(11085398-11085451)
chr3 (64-129)||(17762656-17762721)
chr3 (64-129)||(19063976-19064041)
chr3 (64-129)||(19269920-19269985)
chr3 (64-129)||(19545524-19545589)
chr3 (55-128)||(21490091-21490164)
chr3 (64-129)||(26390690-26390755)
chr3 (64-129)||(30219352-30219417)
chr3 (65-129)||(26830498-26830562)
chr3 (65-129)||(27212837-27212901)
chr3 (40-116)||(29236034-29236110)
chr3 (64-127)||(11007741-11007804)
chr3 (64-115)||(18539818-18539869)
chr3 (64-114)||(4393421-4393471)
chr3 (67-129)||(19223466-19223528)
chr3 (66-128)||(31433753-31433815)
chr3 (40-129)||(6088284-6088373)
chr3 (64-129)||(6718724-6718789)
chr3 (64-129)||(9652592-9652657)
chr3 (64-129)||(11915772-11915837)
chr3 (40-117)||(27711236-27711313)
chr3 (64-129)||(29956386-29956451)
chr3 (64-129)||(30005541-30005606)
chr3 (64-113)||(49915465-49915514)
chr3 (64-128)||(11219152-11219216)
chr3 (64-128)||(21020079-21020143)
chr3 (65-129)||(46942502-46942566)
chr3 (64-115)||(8543483-8543534)
chr3 (70-129)||(8546265-8546324)
chr3 (64-129)||(8110353-8110418)
chr3 (64-129)||(29704088-29704153)
chr3 (64-121)||(36564503-36564560)
chr3 (76-129)||(37283549-37283602)
chr3 (65-129)||(1628230-1628294)
chr3 (55-127)||(10772112-10772184)
chr3 (64-128)||(20088414-20088478)
chr3 (64-116)||(27968929-27968981)
chr3 (64-129)||(10803734-10803799)
chr3 (41-90)||(22933075-22933124)
chr3 (40-105)||(35579605-35579670)
chr3 (64-128)||(15490049-15490112)
chr3 (68-128)||(20615400-20615460)
chr3 (65-125)||(31250103-31250163)
chr3 (60-127)||(18380034-18380101)
chr3 (54-128)||(50240750-50240824)
chr3 (64-129)||(27182712-27182777)
chr3 (64-129)||(47263321-47263386)
chr3 (90-128)||(20762007-20762045)
chr3 (64-110)||(29451108-29451154)
chr3 (64-125)||(26963309-26963370)
[»] chr1 (72 HSPs)
chr1 (40-128)||(19865238-19865326)
chr1 (40-129)||(41358981-41359071)
chr1 (40-129)||(28229511-28229600)
chr1 (40-129)||(46789994-46790083)
chr1 (65-128)||(13523018-13523081)
chr1 (55-129)||(50845386-50845460)
chr1 (64-129)||(6459235-6459300)
chr1 (64-129)||(12720827-12720892)
chr1 (64-129)||(14760885-14760950)
chr1 (64-129)||(41071891-41071956)
chr1 (64-129)||(45839310-45839375)
chr1 (64-127)||(41752451-41752514)
chr1 (55-129)||(18894956-18895030)
chr1 (64-129)||(4340425-4340490)
chr1 (64-129)||(9110031-9110096)
chr1 (64-129)||(9464121-9464186)
chr1 (40-129)||(41120793-41120882)
chr1 (64-129)||(6412109-6412174)
chr1 (64-129)||(12161832-12161897)
chr1 (64-129)||(12174822-12174887)
chr1 (40-128)||(12806894-12806983)
chr1 (64-129)||(15243103-15243168)
chr1 (64-129)||(20408216-20408281)
chr1 (64-129)||(22158820-22158885)
chr1 (64-129)||(22603566-22603631)
chr1 (64-129)||(23457915-23457980)
chr1 (64-129)||(52183696-52183761)
chr1 (64-128)||(7830049-7830113)
chr1 (40-128)||(8941051-8941139)
chr1 (65-129)||(26825259-26825323)
chr1 (40-128)||(46786015-46786103)
chr1 (65-128)||(11917805-11917868)
chr1 (54-129)||(13308876-13308951)
chr1 (65-128)||(19081747-19081810)
chr1 (65-128)||(19129635-19129698)
chr1 (66-129)||(46339501-46339564)
chr1 (64-129)||(9985383-9985448)
chr1 (66-123)||(12370003-12370060)
chr1 (64-128)||(9259240-9259304)
chr1 (40-112)||(9882110-9882182)
chr1 (77-129)||(25788053-25788105)
chr1 (64-128)||(29549436-29549500)
chr1 (65-129)||(38531226-38531290)
chr1 (64-128)||(48522536-48522600)
chr1 (64-127)||(13102334-13102397)
chr1 (55-129)||(41063206-41063280)
chr1 (66-115)||(7181625-7181674)
chr1 (40-129)||(9177094-9177183)
chr1 (64-129)||(17661068-17661133)
chr1 (64-129)||(18890605-18890670)
chr1 (64-129)||(32046894-32046959)
chr1 (64-129)||(50092354-50092419)
chr1 (65-129)||(16913633-16913697)
chr1 (65-128)||(12989871-12989934)
chr1 (65-128)||(20580928-20580991)
chr1 (65-128)||(22789648-22789711)
chr1 (40-123)||(49881039-49881121)
chr1 (65-119)||(14486698-14486752)
chr1 (40-129)||(45918960-45919049)
chr1 (64-129)||(51973442-51973507)
chr1 (89-129)||(17200066-17200106)
chr1 (65-129)||(46865262-46865326)
chr1 (65-128)||(16258543-16258606)
chr1 (85-128)||(27253912-27253955)
chr1 (55-125)||(30928438-30928508)
chr1 (55-127)||(30673503-30673575)
chr1 (78-129)||(6775919-6775970)
chr1 (78-129)||(13195615-13195666)
chr1 (55-117)||(39748942-39749004)
chr1 (64-128)||(17734010-17734075)
chr1 (64-129)||(20290376-20290441)
chr1 (60-123)||(18787974-18788035)
[»] scaffold0006 (2 HSPs)
scaffold0006 (40-129)||(84730-84819)
scaffold0006 (65-128)||(121044-121107)
[»] chr2 (46 HSPs)
chr2 (55-129)||(41637623-41637697)
chr2 (64-129)||(13613149-13613214)
chr2 (64-129)||(30783352-30783417)
chr2 (60-129)||(32008962-32009031)
chr2 (40-129)||(43408567-43408655)
chr2 (65-129)||(31266369-31266433)
chr2 (40-127)||(44476433-44476520)
chr2 (67-129)||(28841398-28841460)
chr2 (44-129)||(7093562-7093647)
chr2 (64-129)||(28319635-28319700)
chr2 (64-129)||(32300465-32300530)
chr2 (40-129)||(37552217-37552306)
chr2 (64-129)||(37724048-37724113)
chr2 (64-123)||(27523025-27523084)
chr2 (55-129)||(29749459-29749533)
chr2 (40-129)||(12779590-12779679)
chr2 (64-129)||(14757177-14757242)
chr2 (40-129)||(23858013-23858102)
chr2 (40-129)||(36550826-36550915)
chr2 (65-129)||(18916456-18916520)
chr2 (69-129)||(22140420-22140480)
chr2 (64-115)||(23388448-23388499)
chr2 (54-129)||(26243377-26243452)
chr2 (55-129)||(13788111-13788185)
chr2 (70-128)||(35697475-35697533)
chr2 (64-129)||(1141550-1141615)
chr2 (64-129)||(8430310-8430375)
chr2 (64-129)||(15636791-15636856)
chr2 (64-129)||(18551309-18551374)
chr2 (64-129)||(27327630-27327695)
chr2 (64-129)||(28262378-28262443)
chr2 (64-128)||(21293768-21293832)
chr2 (68-128)||(26687748-26687808)
chr2 (64-115)||(32185846-32185897)
chr2 (39-129)||(38362327-38362417)
chr2 (55-129)||(41736177-41736251)
chr2 (64-129)||(20065130-20065195)
chr2 (76-125)||(44722958-44723007)
chr2 (65-122)||(37802441-37802498)
chr2 (64-129)||(44366053-44366118)
chr2 (68-111)||(29998633-29998676)
chr2 (55-125)||(40018807-40018877)
chr2 (64-129)||(18609528-18609593)
chr2 (40-123)||(31966586-31966667)
chr2 (55-126)||(8763639-8763710)
chr2 (90-129)||(27039964-27040003)
[»] scaffold0219 (1 HSPs)
scaffold0219 (64-129)||(19621-19686)
[»] scaffold0076 (1 HSPs)
scaffold0076 (64-129)||(26501-26566)
[»] scaffold0717 (1 HSPs)
scaffold0717 (64-129)||(975-1040)
[»] scaffold0087 (1 HSPs)
scaffold0087 (64-129)||(37843-37908)
[»] scaffold0069 (1 HSPs)
scaffold0069 (64-129)||(10176-10241)
[»] scaffold0014 (1 HSPs)
scaffold0014 (40-129)||(22205-22294)
[»] scaffold0009 (3 HSPs)
scaffold0009 (39-128)||(182523-182612)
scaffold0009 (64-129)||(219654-219719)
scaffold0009 (40-97)||(215744-215801)
[»] scaffold0007 (3 HSPs)
scaffold0007 (64-129)||(3760-3825)
scaffold0007 (55-128)||(202783-202856)
scaffold0007 (64-112)||(276207-276255)
[»] scaffold0001 (3 HSPs)
scaffold0001 (64-125)||(8170-8231)
scaffold0001 (64-125)||(21902-21963)
scaffold0001 (64-129)||(84321-84386)
[»] scaffold0603 (1 HSPs)
scaffold0603 (64-129)||(6035-6100)
[»] scaffold0576 (1 HSPs)
scaffold0576 (64-129)||(9285-9350)
[»] scaffold0128 (1 HSPs)
scaffold0128 (40-129)||(10719-10808)
[»] scaffold0058 (1 HSPs)
scaffold0058 (64-129)||(74597-74662)
[»] scaffold0047 (1 HSPs)
scaffold0047 (64-129)||(58600-58665)
[»] scaffold0002 (1 HSPs)
scaffold0002 (40-129)||(439957-440046)
[»] scaffold0019 (1 HSPs)
scaffold0019 (64-123)||(173462-173521)
[»] scaffold0599 (1 HSPs)
scaffold0599 (64-129)||(7523-7588)
[»] scaffold0240 (1 HSPs)
scaffold0240 (64-129)||(15046-15111)
[»] scaffold0108 (1 HSPs)
scaffold0108 (64-129)||(12671-12735)
[»] scaffold0284 (1 HSPs)
scaffold0284 (41-129)||(1575-1663)
[»] scaffold0062 (1 HSPs)
scaffold0062 (55-129)||(43926-44000)
[»] scaffold0035 (1 HSPs)
scaffold0035 (70-128)||(74774-74832)
[»] scaffold0502 (1 HSPs)
scaffold0502 (64-129)||(10910-10975)
[»] scaffold0655 (1 HSPs)
scaffold0655 (65-129)||(3218-3282)
[»] scaffold0023 (1 HSPs)
scaffold0023 (63-115)||(39773-39825)
[»] scaffold0184 (1 HSPs)
scaffold0184 (64-127)||(7474-7537)
[»] scaffold0211 (1 HSPs)
scaffold0211 (40-116)||(19207-19283)
[»] scaffold0114 (1 HSPs)
scaffold0114 (40-123)||(36297-36379)
[»] scaffold0161 (1 HSPs)
scaffold0161 (64-110)||(6813-6859)
[»] scaffold0024 (1 HSPs)
scaffold0024 (65-116)||(112347-112398)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 6e-43; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 193 - 281
Target Start/End: Original strand, 11852154 - 11852242
Alignment:
Q  193 ttgcctttcctaatttgttccaactaacccagtgaacttttctttgtttctctgttgaaccccaccaaaatttggccaacatcgcttca 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11852154 ttgcctttcctaatttgttccaactaacccagtgaacttttctttgtttctctgttgaaccccaccaaaatttggccaacatcgcttca 11852242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 4514759 - 4514847
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  ||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4514759 cactactaaaaaaacaaaaattagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgag 4514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 2650974 - 2650884
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  2650974 ccactactaaaaaaacaaaaattaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 2650884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 26577260 - 26577348
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  26577260 cactactaaaaaa-caaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgagg 26577348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 47523771 - 47523706
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47523771 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 47523706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 40847556 - 40847493
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40847556 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 40847493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 1824346 - 1824256
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||  ||||||||| ||||||||||  |||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  1824346 ccactactaaaaaaacaaaaattagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 1824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 24605847 - 24605921
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24605847 aaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 24605921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 3872332 - 3872243
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  3872332 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgagg 3872243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 3904623 - 3904534
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  3904623 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgagg 3904534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23232057 - 23232122
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23232057 tgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgagg 23232122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 36636524 - 36636589
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36636524 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 36636589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 816308 - 816248
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  816308 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 816248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 11852027 - 11852090
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  11852027 gagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgag 11852090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 1907373 - 1907438
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  1907373 tgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagg 1907438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 15014526 - 15014461
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  15014526 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgagg 15014461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 21917455 - 21917390
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21917455 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 21917390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 22486416 - 22486477
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22486416 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 22486477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 23577310 - 23577245
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  23577310 tgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgagg 23577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 27806036 - 27806101
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  27806036 tgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagg 27806101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 28800896 - 28800961
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28800896 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 28800961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 31425632 - 31425567
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31425632 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgagg 31425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 33427708 - 33427773
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  33427708 tgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagg 33427773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 39979745 - 39979680
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  39979745 tgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagg 39979680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 2457688 - 2457752
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  2457688 tgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag 2457752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 10050957 - 10050893
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10050957 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 10050893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 15969802 - 15969866
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  15969802 tgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgag 15969866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 31042270 - 31042333
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  31042270 gagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgag 31042333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 22501613 - 22501675
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  22501613 gagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtga 22501675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 1842912 - 1842977
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  1842912 tgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgagg 1842977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 7733433 - 7733368
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  7733433 tgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgagg 7733368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 11036525 - 11036590
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  11036525 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 11036590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 20174038 - 20174103
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  20174038 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 20174103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 21623015 - 21623104
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||| ||||||||||||||| |||| ||||||||||||    
T  21623015 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgagg 21623104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 23539226 - 23539315
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||| | |||||||| || |||||||||||||||||||||||| ||||||||||||| |  ||||||||||||    
T  23539226 cactactaaaaaaacaaaaatcagtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagg 23539315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 45664786 - 45664851
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  45664786 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgagg 45664851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 38057651 - 38057715
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  38057651 gagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgagg 38057715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 2093507 - 2093430
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||| ||| ||||    
T  2093507 cactactaaaaaatcaaaaattagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaa 2093430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 18217847 - 18217912
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  18217847 tgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgagg 18217912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 20429483 - 20429548
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||   |||||||||||    
T  20429483 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgagg 20429548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 37135406 - 37135341
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||| |||||    
T  37135406 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgagg 37135341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 42926541 - 42926476
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  42926541 tgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgagg 42926476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 23750857 - 23750793
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||  | ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  23750857 tgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgag 23750793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 48933160 - 48933219
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  48933160 aaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 48933219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 6849332 - 6849267
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | ||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  6849332 tgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagg 6849267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 14786760 - 14786691
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||||||| | |||| ||| | ||||||||||||||||||||||||||||| |||||||||||    
T  14786760 ttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgagg 14786691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 20924079 - 20924018
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| ||||||  |||||||    
T  20924079 tgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgt 20924018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 24140468 - 24140533
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||| |||| |||||||||| |||||||| ||||||||||||||||||||    
T  24140468 tgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgagg 24140533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 9698659 - 9698596
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||  |||||| ||||||||||    
T  9698659 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtga 9698596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27304895 - 27304950
Alignment:
Q  71 aaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtg 126  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||    
T  27304895 aaacgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtg 27304950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 23699946 - 23699881
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||||| |||||| ||||||||||||||||||||   |||||||||||    
T  23699946 tgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgagg 23699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 21871607 - 21871651
Alignment:
Q  85 tctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  21871607 tctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 21871651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 25777232 - 25777168
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||| |||||||||| | |||||||||||| ||| |||| |||||||||||    
T  25777232 gagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagg 25777168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 32267366 - 32267430
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||| |||  |||||||||||    
T  32267366 gagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagg 32267430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 11890277 - 11890203
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||  ||| ||||||| |||| | ||||||||||||||| ||||||||||||| |||||    
T  11890277 aaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagg 11890203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 15330320 - 15330262
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||||  ||||||||||| |||||||||||||||||||||  ||||||||||    
T  15330320 aaaacttgaaatttctctctaattctgtcactaaattttgcgaccaagaaatttgtgag 15330262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 36993838 - 36993903
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| ||||||| || |||||||||||||||||||||| |||| ||  |||||||||||    
T  36993838 tgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgagg 36993903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 1822124 - 1822049
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||| ||||| ||||||| |||||||||||| ||| ||||||||  || | | ||||||||||||    
T  1822124 caaaaattagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgagg 1822049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Complemental strand, 1841889 - 1841838
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||| ||| |||||||||| | ||| ||||||||||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagg 1841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 26415443 - 26415506
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||||| | |||||||||| ||||| |||||||||||||| ||| |||| ||||||||||    
T  26415443 gaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgag 26415506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 27130353 - 27130416
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggc 130  Q
    |||||||||  ||||||||||||  |||||||||||||| ||||||||  || |||||||||||||    
T  27130353 gagggaaaatgtgaaatccctct--aattccgtcactaacttttgcgattaacgaatttgtgaggc 27130416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 105
Target Start/End: Complemental strand, 5235449 - 5235420
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaat 105  Q
    ||||||||||||||||||||||||||||||    
T  5235449 tgaaatccctctctaattccgtcactaaat 5235420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 10222745 - 10222697
Alignment:
Q  69 gaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    |||||| | ||||||||||||||||| |||| |||||||||||| ||||    
T  10222745 gaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa 10222697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 9e-33; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 25397933 - 25397846
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25397933 cactactaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 25397846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 39 - 129
Target Start/End: Original strand, 10494730 - 10494820
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10494730 ccactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 10494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 747013 - 746924
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||   |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  747013 cactactaaaaaaataaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 746924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 38837816 - 38837727
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  38837816 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 38837727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 40484038 - 40484121
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  40484038 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 40484121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 618312 - 618377
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  618312 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 618377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 16632019 - 16631930
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||| ||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  16632019 cactactaaaaaaacaaaaattagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgagg 16631930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 17039752 - 17039687
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17039752 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 17039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 33818682 - 33818617
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33818682 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 33818617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 5982654 - 5982728
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5982654 aaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgagg 5982728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 17772114 - 17772024
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||  ||||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||| ||| |||||| |||||    
T  17772114 ccactactaaaaaatcaaaaattagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgagg 17772024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 123
Target Start/End: Complemental strand, 27428132 - 27428074
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27428132 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 27428074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 2472835 - 2472770
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  2472835 tgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagg 2472770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 4125333 - 4125244
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||  ||||||| ||||||||||||||||||||||||||||||||   |||||||||||    
T  4125333 cactactaaaaaaacaaaaattagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 4125244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 16121960 - 16121895
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  16121960 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgagg 16121895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 23423877 - 23423812
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  23423877 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgagg 23423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 35620464 - 35620399
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  35620464 tgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 35620399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 36597485 - 36597396
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||| |||||||||||| ||||||||||||| ||||||| ||||||||||||    
T  36597485 cactactaaaaaaacaaaaattagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgagg 36597396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 8886972 - 8886907
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8886972 tgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 8886907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23975653 - 23975718
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  23975653 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 23975718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26708706 - 26708641
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  26708706 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 26708641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26978440 - 26978375
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  26978440 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 26978375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 33816879 - 33816814
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  33816879 tgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgagg 33816814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 25673344 - 25673288
Alignment:
Q  69 gaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25673344 gaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt 25673288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 7888806 - 7888880
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| | |||||||||||||| |||||||||||||||| ||||||| ||||||||||||    
T  7888806 aaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgagg 7888880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 8108981 - 8108916
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||   |||||||||||    
T  8108981 tgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 8108916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 11927903 - 11927842
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  11927903 ggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagg 11927842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 12328347 - 12328282
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||| |||  |||||||||||    
T  12328347 tgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgagg 12328282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 15060991 - 15061056
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  15060991 tgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 15061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23408998 - 23409063
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  23408998 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgagg 23409063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 28265596 - 28265531
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||| || | ||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  28265596 tgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 28265531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 36196412 - 36196477
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||  || |||||||||    
T  36196412 tgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgagg 36196477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 13620248 - 13620184
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||||||||||  ||||||||||    
T  13620248 tgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgag 13620184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 17036532 - 17036468
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  17036532 gagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagg 17036468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 20959527 - 20959591
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||| ||||||||||||||||||||||||| |||| || ||||||||||||    
T  20959527 gagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgagg 20959591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 24138962 - 24138898
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||||||||||  ||||||||||    
T  24138962 tgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgag 24138898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 17079425 - 17079484
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||    
T  17079425 agggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgt 17079484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 17986747 - 17986810
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||||| || ||||||||||    
T  17986747 tgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtga 17986810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 35778148 - 35778223
Alignment:
Q  53 gcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||||||| |||||||||| ||| |||| || | |||||||||||||||| |||||||||||    
T  35778148 gcaaaaattagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgag 35778223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 12045745 - 12045810
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||| |||||||||||||||||||||||| |||||||  |||||||||||    
T  12045745 tgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgagg 12045810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 25652704 - 25652639
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  | ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  25652704 tgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgagg 25652639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 36716321 - 36716256
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||| ||||||||||| ||| |||||||| |||||| |||||||||||||    
T  36716321 tgagggaaaacgtgaaatccttctctaattccttcattaaattttacgaccatagaatttgtgagg 36716256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 10420372 - 10420308
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||||  || ||||||||    
T  10420372 gagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagg 10420308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 31853208 - 31853144
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||||| | ||||| |||||    
T  31853208 gaggaaaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagg 31853144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 32726846 - 32726786
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||||||||  ||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  32726846 gagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgt 32726786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 103
Target Start/End: Original strand, 16464672 - 16464735
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaa 103  Q
    ||||||||||||  ||||||||| ||||||||||| |||||| |||||||| ||||||||||||    
T  16464672 cactactaaaaaaacaaaaattagtgagggaaaacatgaaattcctctctatttccgtcactaa 16464735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 33735088 - 33735029
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| |||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagg 33735029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 7003849 - 7003786
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||| ||  ||||||||||||    
T  7003849 tgagggaaaacgtgaaatc--tctctaattccgtcactaaattttgcgatcatggaatttgtgagg 7003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 3080826 - 3080753
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||| ||||||||||| ||||||||||||| |||| | ||||||| ||||| ||| ||||||||||||||    
T  3080826 aaaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgag 3080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 36832011 - 36831946
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  | |||||||||||||||||| ||||||||||||| |||||| |||||| |||||    
T  36832011 tgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgagg 36831946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 9024208 - 9024291
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctct-aattccgtcactaaattttgcgaccaaagaattt 123  Q
    |||||||||||  ||||||||| ||||||| ||| ||||||| |||||| ||||  || |||||||||||||||||| ||||||    
T  9024208 actactaaaaaaacaaaaattagtgagggataacatgaaatctctctctaaattatgttactaaattttgcgaccaaggaattt 9024291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 13974199 - 13974156
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattt 107  Q
    ||||||||||| |||||||||||||| |||||||||||||||||    
T  13974199 tgagggaaaacgtgaaatccctctctgattccgtcactaaattt 13974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 108
Target Start/End: Complemental strand, 22649449 - 22649406
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaatttt 108  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||    
T  22649449 gagggaaaacgtgaaatccttctctaattccgtcattaaatttt 22649406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 20188047 - 20187997
Alignment:
Q  79 aatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  20188047 aatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgagg 20187997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 103
Target Start/End: Complemental strand, 29727966 - 29727928
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaa 103  Q
    |||||||||| |||||| |||||||||||||||||||||    
T  29727966 gagggaaaacgtgaaattcctctctaattccgtcactaa 29727928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 23974682 - 23974633
Alignment:
Q  79 aatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||||| ||||| |||||||| |||| || |||||||||||    
T  23974682 aatccctctctaatttcgtcattaaattttacgacaaaggaatttgtgag 23974633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 32247901 - 32247990
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32247901 cactactaaaaaaacaaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgagg 32247990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 129
Target Start/End: Complemental strand, 25273474 - 25273383
Alignment:
Q  38 cccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25273474 cccactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgagg 25273383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 26399151 - 26399064
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26399151 cactactaaaaaa-caaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgag 26399064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 19493801 - 19493711
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaa-tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19493801 cactactaaaaaaacaaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 19493711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 13061076 - 13060987
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||||||||    
T  13061076 cactactaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgagg 13060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 17103986 - 17103921
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17103986 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 17103921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 17824737 - 17824672
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17824737 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 17824672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 5670314 - 5670225
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5670314 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 5670225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 11938737 - 11938826
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11938737 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 11938826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 27869254 - 27869319
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27869254 tgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 27869319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 3823149 - 3823213
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3823149 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 3823213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 23752431 - 23752343
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  ||||||||| ||||||||||  | ||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  23752431 cactactaaaaaaacaaaaattagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgag 23752343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 31399639 - 31399564
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  31399639 caaaaattagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgagg 31399564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 19488207 - 19488117
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||||||  ||||| ||| ||||||||||  |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  19488207 ccacaactaaaaaaacaaaagttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19488117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 8555425 - 8555360
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8555425 tgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 8555360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 18010181 - 18010116
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  18010181 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgagg 18010116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 25656003 - 25655914
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||  ||||||||||| |||||||||||||||||||  |||||||||||||||||||  ||||||||||||    
T  25656003 cactactaaaaaaacaaaaatttgtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgagg 25655914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 24576144 - 24576080
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24576144 gagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 24576080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 4330994 - 4331059
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  4330994 tgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 4331059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 8824817 - 8824906
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||| ||||  | |||||||||||||||||||||||||||||||||||| || |||| |||||||    
T  8824817 cactactaaaaaaacaaaaattagtgaggaaaaatgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgagg 8824906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 17810314 - 17810379
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  17810314 tgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgagg 17810379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19240883 - 19240948
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  19240883 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19240948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19256228 - 19256293
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  19256228 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 19256293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19314067 - 19314132
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  19314067 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19314132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 22939329 - 22939394
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  22939329 tgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgagg 22939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 24636644 - 24636733
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  24636644 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgagg 24636733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 27910885 - 27910820
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  27910885 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgagg 27910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 27957304 - 27957239
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  27957304 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgagg 27957239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 33652583 - 33652648
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||||||||||| ||||||||||||    
T  33652583 tgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgagg 33652648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 6816504 - 6816440
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  6816504 tgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgag 6816440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 37992106 - 37992178
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| |||||    
T  37992106 aaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtga 37992178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 15289650 - 15289722
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||||||||||| ||||||   ||||||||||| |||||||||||| |||||||||||||||||||    
T  15289650 caaaaattaatgagggaaaacatgaaata--tctctaattccatcactaaattttacgaccaaagaatttgtgag 15289722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 15470019 - 15470091
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||||||||||| ||||||   ||||||||||| |||||||||||| |||||||||||||||||||    
T  15470019 caaaaattaatgagggaaaacatgaaata--tctctaattccatcactaaattttacgaccaaagaatttgtgag 15470091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 30687966 - 30688017
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30687966 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 30688017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 16062060 - 16061995
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| ||||||| ||||||||||||||||||| |||||||||||| |||||||||||||    
T  16062060 tgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgagg 16061995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 21350494 - 21350559
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  21350494 tgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 21350559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 24193317 - 24193252
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||   |||||||||||    
T  24193317 tgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 24193252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 29350939 - 29351004
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||   |||||||||||    
T  29350939 tgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgagg 29351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 43431680 - 43431615
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  43431680 tgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgagg 43431615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 8789873 - 8789921
Alignment:
Q  81 tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8789873 tccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 8789921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 40289541 - 40289478
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  40289541 tgagggaaaacgtaaaatccctc-ctaattccgtcactaaattttgcgaccaaggaatttgtgag 40289478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 10917819 - 10917889
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgc 110  Q
    ||||||||||||   |||||||| ||||| ||||| || ||||||||||||||||||||||||||||||||    
T  10917819 cactactaaaaaaataaaaattagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgc 10917889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 4647876 - 4647811
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  4647876 tgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgagg 4647811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 15251614 - 15251671
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    |||| |||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  15251614 ttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaa 15251671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 25000576 - 25000487
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | | ||||||||||||||||||||| ||||| |||||| || ||||||||||||    
T  25000576 cactactaaaaaaactaaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgagg 25000487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 30467099 - 30467010
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||| |||||||||||| ||||||||||||||||||||  ||||| |||||    
T  30467099 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgagg 30467010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 33413097 - 33413044
Alignment:
Q  58 aattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcg 111  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  33413097 aattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg 33413044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 21219349 - 21219297
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  21219349 tgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgag 21219297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 29345088 - 29345150
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| || ||  |||||||||    
T  29345088 gagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtga 29345150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 5879220 - 5879285
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | |||| |||||||||||||||||||||||||| |||||||  |||||||||||    
T  5879220 tgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgagg 5879285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 6817070 - 6817135
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  | ||||| |||||||||||||||||||||||||| ||||||  |||||||||||    
T  6817070 tgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgagg 6817135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 9915161 - 9915112
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgac 113  Q
    ||||||||||| ||||||||||||||||| | ||||||||||||||||||    
T  9915161 tgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcgac 9915112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 18844661 - 18844600
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||||||||||||||||||  || | ||||||||||||||||| |||||||||||    
T  18844661 ggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgagg 18844600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 32961675 - 32961740
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  | |||| |||||||||||||||||||||| |||||||||||  |||||||||||    
T  32961675 tgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgagg 32961740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 41527845 - 41527756
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||| ||| ||||||| ||| ||||||  || |||||||||||||| ||| |||||| |||||    
T  41527845 cactactaaaaaaacaaaaattagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagg 41527756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 31344292 - 31344245
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcga 112  Q
    |||||||||  |||||| ||||||||||||||||| ||||||||||||    
T  31344292 gagggaaaatgtgaaattcctctctaattccgtcattaaattttgcga 31344245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 6084351 - 6084305
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 124  Q
    ||||| |||||||||||||||||||||||||  |||||| |||||||    
T  6084351 aaatctctctctaattccgtcactaaatttttagaccaaggaatttg 6084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 9631423 - 9631485
Alignment:
Q  68 ggaaaacctgaaatccctctctaattcc-gtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||||||  |||||||||||| |||||||||||||||||  | |||||||||||||    
T  9631423 ggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgagg 9631485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 16784104 - 16784031
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||||||||  ||||||  || ||||||||| | | |||||||||| | |||| ||||||||||    
T  16784104 aaaaattaatgagggaaaatatgaaatatctatctaattccattattaaattttgcaatcaaataatttgtgag 16784031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 24479915 - 24479874
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttg 109  Q
    ||||||| |||||| |||||||||||| ||||||||||||||    
T  24479915 ggaaaacgtgaaattcctctctaattctgtcactaaattttg 24479874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 3692291 - 3692227
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||| | |||||| ||||||||||| | ||||||||||  ||| |||||||||||||||    
T  3692291 gaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgagg 3692227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 5192334 - 5192245
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5192334 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgagg 5192245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 11077643 - 11077732
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  11077643 cactactaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgagg 11077732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 12499210 - 12499299
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  12499210 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgagg 12499299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 12506539 - 12506628
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  12506539 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgagg 12506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 12509691 - 12509602
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  12509691 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgagg 12509602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 18033650 - 18033581
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18033650 ttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 18033581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 2992633 - 2992698
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2992633 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 2992698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 9892981 - 9893046
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9892981 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 9893046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 22579470 - 22579405
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22579470 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgagg 22579405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 28364929 - 28364994
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364929 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 28364994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 33547540 - 33547629
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||   |||||||| ||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||    
T  33547540 cactactaaaaaaataaaaattagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagg 33547629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 5360405 - 5360492
Alignment:
Q  42 ctactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||   ||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  5360405 ctactaaaaaaataaaaattaacgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagg 5360492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 12845022 - 12845085
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12845022 gagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 12845085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 14872127 - 14872202
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  14872127 caaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgagg 14872202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 13145011 - 13145085
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||    
T  13145011 aaaaattagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgagg 13145085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 6598482 - 6598547
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6598482 tgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgagg 6598547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 11049872 - 11049807
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  11049872 tgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 11049807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 22083856 - 22083921
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  22083856 tgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgagg 22083921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23281804 - 23281869
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  23281804 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgagg 23281869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 25398020 - 25398085
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25398020 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 25398085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 26939605 - 26939670
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  26939605 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 26939670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 27705440 - 27705505
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  27705440 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 27705505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 12951726 - 12951790
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  12951726 tgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgag 12951790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 21691616 - 21691553
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21691616 gaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgag 21691553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 14886570 - 14886644
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  14886570 aaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagg 14886644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 343688 - 343619
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  343688 ttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgagg 343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 495748 - 495683
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  495748 tgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 495683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 1939363 - 1939298
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  1939363 tgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgagg 1939298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 6605641 - 6605552
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||||  ||||||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||  |||||||||||    
T  6605641 cactattaaaaaaacaaaaattagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgagg 6605552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 15364579 - 15364514
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  15364579 tgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 15364514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 20692955 - 20692879
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  20692955 cactactaaaaaa-caaaaattagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaa 20692879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 24661130 - 24661065
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  24661130 tgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgagg 24661065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 26224446 - 26224511
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||||    
T  26224446 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgagg 26224511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 33250829 - 33250764
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  33250829 tgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 33250764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 6978300 - 6978360
Alignment:
Q  69 gaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  6978300 gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 6978360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 21140957 - 21141008
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21140957 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 21141008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 18492389 - 18492451
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  18492389 agggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgag 18492451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 21990304 - 21990230
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| | |||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  21990304 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgagg 21990230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 12200712 - 12200777
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||    
T  12200712 tgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgagg 12200777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 15448379 - 15448468
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||| ||||||||||||  || ||||||||||||    
T  15448379 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgagg 15448468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 15961552 - 15961467
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||||  ||||||||| ||||||||||| | |||| ||||||||||||||| |||||||||||||| |||  |||||||    
T  15961552 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgt 15961467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 20182163 - 20182228
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||   |||||||||||    
T  20182163 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgagg 20182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 22153828 - 22153763
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||   |||||||||||    
T  22153828 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgagg 22153763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 19175905 - 19175833
Alignment:
Q  57 aaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||| ||||||||||  | |||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  19175905 aaattagtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 19175833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 27796955 - 27796891
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| | ||| |||||| ||||    
T  27796955 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgag 27796891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 2669341 - 2669392
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  2669341 aaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 2669392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 17919551 - 17919613
Alignment:
Q  61 taatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||||   | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  17919551 taatgagggaaactgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 17919613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 3673278 - 3673189
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||| |||||| ||| ||||| ||||  | ||||   |||||||||||||||||||||||| |||||||| |||||||||||    
T  3673278 cactactaaaaaagcaaaatttagtgaggaaaaatgtaaaatttttctctaattccgtcactaaattttacgaccaaaaaatttgtgagg 3673189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 11350190 - 11350263
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||| ||||||||||| | ||||| ||||||||||| |||||||||||||||||  || ||||||||||    
T  11350190 caaaaattagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtga 11350263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 14036638 - 14036703
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||| |||| |||||||||||| ||  ||||||||||||    
T  14036638 tgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgagg 14036703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 14772691 - 14772744
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  14772691 tgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgagg 14772744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 28668094 - 28668183
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||   |||||||| |||||||||   | |||||||| ||||||||||||| |||||||||||| ||| ||||||||||||    
T  28668094 cactactaaaaaaataaaaattagtgagggaaattgtaaaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgagg 28668183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 6065447 - 6065519
Alignment:
Q  56 aaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||| |||||||||||  ||||| |||||||||||  |||| |||||||||||| |||||||||||||||    
T  6065447 aaaattagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgag 6065519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 10929621 - 10929553
Alignment:
Q  61 taatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||| ||||||| |||| | ||||||||| ||||||||||||| || ||||||||||||    
T  10929621 taatgagggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgagg 10929553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 12351706 - 12351642
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||  |||||||||||||||| ||||||||||||| || ||||||||||||    
T  12351706 gagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgagg 12351642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 18048806 - 18048870
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||| ||||||||||| |||||||  |||||||||||||||||||| |||||||||||    
T  18048806 tgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgag 18048870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 12205305 - 12205242
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| |||   |||||||||||||    
T  12205305 gagggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgag 12205242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 12680304 - 12680241
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| |||||| ||||||||||||||||| |||||||| ||| ||||||||| |||||    
T  12680304 gagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgag 12680241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 129
Target Start/End: Original strand, 9060115 - 9060173
Alignment:
Q  71 aaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||||  ||||||||||| |||||||||||||||||||||| |||||||||||    
T  9060115 aaacatgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagg 9060173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 9885252 - 9885325
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||| ||||||||||| |||||||||||| |||||  ||||||||||||||| |||||  ||||||||||    
T  9885252 aaaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgag 9885325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 10458758 - 10458847
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||| ||||  | ||||  |||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  10458758 cactactaaaaaaacaaaaattagtgaggaaaaatgtaaaatttctctttaattccatcactaaattttgcaaccaaggaatttgtgagg 10458847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 11530234 - 11530287
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaatttt 108  Q
    |||| ||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  11530234 aaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaatttt 11530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 12160967 - 12160903
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||| |||||||||||||| ||| |||| |||||||||||    
T  12160967 tgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgagg 12160903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 15509186 - 15509239
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||||||||||||||||||||| ||||||   |||||||||||    
T  15509186 tgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgagg 15509239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 16250923 - 16250858
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||   |||||||||||    
T  16250923 tgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgagg 16250858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 22055733 - 22055668
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||||||||||||||||| ||| | ||||||| |||||| ||||||||||||    
T  22055733 tgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgagg 22055668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 30834081 - 30834016
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||| |||| ||||||    
T  30834081 tgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgagg 30834016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 16118155 - 16118225
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||| ||||||||||| ||| ||||||| |||||||||| ||||| |||||||||||| | | ||||||||    
T  16118155 aaaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgt 16118225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Original strand, 5270411 - 5270463
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    |||||||||  |||||| |||||||||||||||||||||||||| ||| ||||    
T  5270411 gagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaa 5270463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 30745846 - 30745779
Alignment:
Q  56 aaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||||||  |||||||||| |||||||  ||||||| |||||||||||||||| ||| |||| |||||||    
T  30745846 aaaattagagagggaaaacgtgaaatc--tctctaagtccgtcactaaattttacgatcaaaaaatttgt 30745779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 12157485 - 12157436
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||||||  ||||||||||||||||||||||||  ||||||||| |||||    
T  12157485 tgaaatcattctctaattccgtcactaaattttatgaccaaagattttgt 12157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 11431745 - 11431698
Alignment:
Q  80 atccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||| |||||||||||||||||||||| |  ||||||||||||||    
T  11431745 atccctctttaattccgtcactaaattttgc-aataaagaatttgtgag 11431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 38645742 - 38645831
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38645742 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgagg 38645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 9059098 - 9059009
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||  ||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  9059098 ccactactaaaaaaacaaaaattggtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgag 9059009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 9670624 - 9670535
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  9670624 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 9670535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 14944738 - 14944827
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  14944738 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 14944827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 25147737 - 25147802
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25147737 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 25147802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 29625317 - 29625406
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  29625317 cactactaaaaaaacaaaaattagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgagg 29625406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 30507979 - 30508068
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30507979 cactactaaaaaaacaaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 30508068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 38619839 - 38619928
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  38619839 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgagg 38619928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 22156722 - 22156658
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22156722 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 22156658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 129
Target Start/End: Original strand, 313582 - 313668
Alignment:
Q  43 tactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||  ||||||||||||||||| ||| ||||||||||||||||||  || ||||||||||||||||||||||||| |||||    
T  313582 tactaaaaaaacaaaaattaatgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagg 313668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 2275799 - 2275734
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  2275799 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgagg 2275734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 5399625 - 5399690
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  5399625 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgagg 5399690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 9239411 - 9239338
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||| ||||||||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  9239411 aaaaattagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgag 9239338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 13028961 - 13028872
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13028961 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 13028872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 19839186 - 19839259
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19839186 aaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 19839259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 37378744 - 37378679
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  37378744 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 37378679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 55309334 - 55309269
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55309334 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 55309269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 22128433 - 22128369
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22128433 tgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgag 22128369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 1638454 - 1638528
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||| |||||||    
T  1638454 aaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagg 1638528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 12105989 - 12106062
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  12105989 caaaaattagtgagggaaaacatgaaacccctctctaattccgtcactaaa-tttgcgaccaaagaatttatgag 12106062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 4586903 - 4586814
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  4586903 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgagg 4586814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 7112091 - 7112002
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||  | |||||||||| |||||||||||||||||||| |||||||  |||||||||||    
T  7112091 cactactaaaaaaccaaaaattagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgagg 7112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 27040146 - 27040081
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  27040146 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 27040081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 32175858 - 32175793
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  32175858 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 32175793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 33914075 - 33914140
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  33914075 tgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagg 33914140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 36689696 - 36689757
Alignment:
Q  67 gggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  36689696 gggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgag 36689757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 46286350 - 46286285
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  46286350 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 46286285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 8878899 - 8878963
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  8878899 tgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgag 8878963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 25026549 - 25026637
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  25026549 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgag 25026637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 37761972 - 37761912
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37761972 aaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 5473856 - 5473930
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  5473856 aaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgagg 5473930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 18051855 - 18051905
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacc 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18051855 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacc 18051905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 4606960 - 4606887
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||| ||||  |||||||||    
T  4606960 caaaaattagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtga 4606887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 18714894 - 18714983
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| | ||| ||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  18714894 cactactaaaaaaactaaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgagg 18714983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 19680545 - 19680480
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  19680545 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 19680480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 22168284 - 22168349
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||| |||||    
T  22168284 tgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgagg 22168349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 42055389 - 42055478
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||| ||||  | ||||| ||| |||||||||| |||||||||||||||||| ||||||||||||    
T  42055389 cactactaaaaaaacaaaaattagtgaggaaaaatgtaaaatcactcactaattccgttactaaattttgcgaccaaggaatttgtgagg 42055478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 6553797 - 6553885
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||  ||||||||| ||||||| ||| ||||||||||||||||||  || ||||||||||||||||||  ||||| |||||    
T  6553797 actactaaaaaaacaaaaattagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagg 6553885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 9913275 - 9913339
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||  || ||||||||    
T  9913275 gagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagg 9913339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 24682446 - 24682383
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  24682446 agggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgagg 24682383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 44783502 - 44783564
Alignment:
Q  68 ggaaaacctgaaatccctct-ctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  44783502 ggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgagg 44783564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 9238770 - 9238681
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||   ||||| ||  ||||||||||| | ||||  |||||||||||||||||||||||||||||||||  |||||||||||    
T  9238770 cactactaaaacaacaaaagtttgtgagggaaaacgtaaaatttctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 9238681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 30568120 - 30568055
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||| |||||||||||||||| |||||||| |||||| |||||||||||||    
T  30568120 tgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgagg 30568055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 45091265 - 45091338
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcga 112  Q
    |||||||||||||  | ||| ||| ||||||||||| | |||||| ||||||||||||||||||||||||||||    
T  45091265 ccactactaaaaaaactaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 45532700 - 45532635
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||||| |||  |||||||||||    
T  45532700 tgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgagg 45532635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 54539278 - 54539367
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||| |||| ||||| ||||||||||||||||||| || ||||||||||||    
T  54539278 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgagg 54539367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 3613012 - 3613076
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||| |||||| ||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  3613012 gaggaaaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagg 3613076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 18744191 - 18744147
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaatttt 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  18744191 tgagggaaaacgtgaaatccctctctaattccgtcactaaatttt 18744147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 30269108 - 30269044
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  30269108 gagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgagg 30269044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 30283081 - 30283145
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||  | ||||| |||||||||||||||||||||||||||||||||| |||||| ||||    
T  30283081 gagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgagg 30283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 38223527 - 38223587
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||   ||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  38223527 gagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgt 38223587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 12071982 - 12072037
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||    
T  12071982 ggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaattt 12072037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 13565036 - 13564973
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||  |||||| ||||||||||    
T  13565036 tgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtga 13564973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 16915385 - 16915449
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||  ||||||| ||||||||||  |||||||||||||||||||||  ||||||||||    
T  16915385 tgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgag 16915449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 23104371 - 23104427
Alignment:
Q  71 aaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||| |||||||||||||||||   ||| |||||||||||||||| |||||||||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtga 23104427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 25225127 - 25225175
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttg 124  Q
    ||||||||||||||||||| || | |||||||||||| |||||||||||    
T  25225127 tgaaatccctctctaattctgttattaaattttgcgatcaaagaatttg 25225175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 29238439 - 29238503
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||| | ||||| || |||||||| ||||||||||||||  |||||||||||||||||    
T  29238439 tgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgag 29238503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 4627223 - 4627134
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||   | ||| ||| ||||||||||  | ||||| |||||||||| |||||||||||||| ||| |||  |||||||||||    
T  4627223 cactactaaaagaactaaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgagg 4627134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 39234962 - 39235020
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||| |||||||  |||||||||  || ||||||||||||||||||| ||||||||||    
T  39234962 ggaaaacgtgaaatc--tctctaattttgttactaaattttgcgaccaaaaaatttgtgag 39235020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 15064137 - 15064048
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15064137 cactactaaaaaaacaaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 15064048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 23773467 - 23773556
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23773467 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 23773556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 26098803 - 26098892
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26098803 cactattaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 26098892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 50665780 - 50665692
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||  ||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  50665780 actactaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgagg 50665692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 5744405 - 5744496
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggc 130  Q
    |||||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  5744405 ccactactaaaaaaacaaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggc 5744496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 5781364 - 5781455
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggc 130  Q
    |||||||||||||  ||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  5781364 ccactactaaaaaaacaaaaattagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggc 5781455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 13921315 - 13921404
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13921315 cactactaaaaaaacaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 13921404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 1745633 - 1745543
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||   |||||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  1745633 ccactactaaaaaaataaaaattagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 1745543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 17269750 - 17269660
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| |||||||  ||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17269750 ccactgctaaaaaaacaaaaattagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgagg 17269660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 10941790 - 10941721
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  10941790 ttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 10941721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 13905183 - 13905094
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||   |||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  13905183 cactactaaaaaaataaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 13905094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 16299875 - 16299940
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16299875 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 16299940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19610352 - 19610417
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19610352 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19610417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 25882584 - 25882649
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25882584 tgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgagg 25882649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 27449102 - 27449167
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449102 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 27449167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 48404850 - 48404939
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48404850 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 48404939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 46012872 - 46012785
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||||| ||| |||||||||||    
T  46012872 actactaaaaaaacaaaaattagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgag 46012785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 5260951 - 5261016
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5260951 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 5261016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 11837335 - 11837270
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  11837335 tgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagg 11837270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 17582422 - 17582357
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17582422 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 17582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 18091668 - 18091603
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18091668 tgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagg 18091603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 18104651 - 18104586
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  18104651 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 18104586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 21816711 - 21816800
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  21816711 cactactaaaaaaactaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 21816800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 23233309 - 23233220
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||   |||||||| ||||||||||| |||||| |||||| |||||| |||||||||||||||||||||| |||||||||    
T  23233309 ccactactaaaaaaataaaaattagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgag 23233220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 28859581 - 28859670
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||| ||| ||||| ||||| | ||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28859581 cactactaaaaaaacaaaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgagg 28859670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 29216006 - 29216071
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  29216006 tgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 29216071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 43329908 - 43329819
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||  | |||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  43329908 cactactaaaaaaacaaaaattagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgagg 43329819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 5565712 - 5565800
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||   |||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||||||||  ||||||||||    
T  5565712 cactactaaaaaaaaaaaaattagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgag 5565800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 7623652 - 7623588
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7623652 tgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgag 7623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 23217328 - 23217264
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  23217328 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgagg 23217264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 28389987 - 28390051
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  28389987 tgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgag 28390051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 36543763 - 36543827
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36543763 tgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgag 36543827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 21088740 - 21088830
Alignment:
Q  39 ccactactaaaaacgcaaaaattaa-tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||  |||||||| | ||||||||||| ||||||||||||| ||||||||||  ||||||||||||||| |||||||||||    
T  21088740 ccactactaaaaaaacaaaaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag 21088830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 1311076 - 1311015
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1311076 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 1311015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 3461455 - 3461366
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |  ||||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||| |||  |||||||||||    
T  3461455 cactactaaacaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgagg 3461366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 8428185 - 8428250
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  8428185 tgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgagg 8428250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 11085451 - 11085398
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11085451 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgagg 11085398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 17762656 - 17762721
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  17762656 tgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgagg 17762721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19063976 - 19064041
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  19063976 tgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgagg 19064041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 19269985 - 19269920
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  19269985 tgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgagg 19269920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19545524 - 19545589
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19545524 tgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19545589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 21490164 - 21490091
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||| ||||||||||  | ||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  21490164 aaaaattagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgag 21490091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26390755 - 26390690
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  26390755 tgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgagg 26390690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 30219352 - 30219417
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  30219352 tgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagg 30219417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 26830562 - 26830498
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||    
T  26830562 gagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgagg 26830498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 27212901 - 27212837
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  27212901 gaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagg 27212837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 29236034 - 29236110
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaa 116  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  29236034 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaa 29236110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 11007804 - 11007741
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  11007804 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtga 11007741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 18539818 - 18539869
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18539818 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 18539869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 64 - 114
Target Start/End: Complemental strand, 4393471 - 4393421
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacc 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4393471 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacc 4393421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 19223466 - 19223528
Alignment:
Q  67 gggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  19223466 gggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagg 19223528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 31433753 - 31433815
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  31433753 agggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgag 31433815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 6088373 - 6088284
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||| ||||||||||||| | ||||||||| |||||| |||||| |||||    
T  6088373 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgagg 6088284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 6718724 - 6718789
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||   |||||||||||    
T  6718724 tgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgagg 6718789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 9652592 - 9652657
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |   |||||||||||    
T  9652592 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgagg 9652657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 11915772 - 11915837
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  11915772 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgagg 11915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 27711313 - 27711236
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    ||||||||||||  |||||||||  || ||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  27711313 cactactaaaaaaacaaaaattagcgacggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 29956386 - 29956451
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  29956386 tgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgagg 29956451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 30005541 - 30005606
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  30005541 tgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgagg 30005606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 49915465 - 49915514
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgac 113  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49915465 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgac 49915514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 11219152 - 11219216
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||| |  |||||||||||    
T  11219152 tgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgag 11219216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 21020079 - 21020143
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  21020079 tgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgag 21020143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 46942502 - 46942566
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||  || ||||||||    
T  46942502 gagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagg 46942566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 8543483 - 8543534
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  8543483 tgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgacca 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 8546265 - 8546324
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgagg 8546324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 8110353 - 8110418
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| ||||||||||||||||| |||||||| ||||||| ||||||||||||    
T  8110353 tgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgagg 8110418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 29704153 - 29704088
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||| |||||||||||| |||||||||||||||||||||||| || | |||||||||||    
T  29704153 tgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgagg 29704088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 36564560 - 36564503
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaat 121  Q
    ||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||    
T  36564560 tgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaat 36564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 37283549 - 37283602
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgagg 37283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 1628230 - 1628294
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||| || |||||| |||||    
T  1628230 gagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgagg 1628294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 10772184 - 10772112
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||| ||| ||||||||||  |||||||||||||||||| ||||| ||||||||||||| ||| |||||||||    
T  10772184 aaaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtga 10772112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 20088414 - 20088478
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  20088414 tgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgag 20088478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 27968929 - 27968981
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaa 116  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  27968929 tgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaa 27968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 10803734 - 10803799
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||| ||||| ||||||||||| ||||||||||||||||  |||||||||||    
T  10803734 tgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgagg 10803799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 22933075 - 22933124
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctcta 90  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  22933075 actactaaaaaaacaaaaattaatgagggaaaacatgaaatccctctcta 22933124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 105
Target Start/End: Complemental strand, 35579670 - 35579605
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaat 105  Q
    ||||||||||||  | ||| ||| ||||||||||| | ||||||||||||||||||||||||||||    
T  35579670 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 15490049 - 15490112
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| |||||| |||||||||||| |||||  |||||||||||||||||||||| ||||||||||    
T  15490049 tgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgag 15490112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 20615460 - 20615400
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||| |||||| |||||||||||| |||| |||||||| |||||||| ||||||||||    
T  20615460 ggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgag 20615400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 31250103 - 31250163
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||||||  |||||||    
T  31250103 gagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgt 31250163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 18380034 - 18380101
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||||||  | |||||||||| |||||||||||||||||||| ||| |||  |||||||||    
T  18380034 ttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtga 18380101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 50240750 - 50240824
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||| ||||||| ||| ||||||| ||||||||||  || ||||||||||||| |||| |||||| ||||    
T  50240750 caaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgag 50240824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 27182777 - 27182712
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||  |||||| |||||||||| ||||||||||| ||| |||||| | ||||||||||    
T  27182777 tgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagg 27182712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 47263386 - 47263321
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||  || ||||| || ||||||||||||||||||||| ||||||||||||    
T  47263386 tgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgagg 47263321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 20762045 - 20762007
Alignment:
Q  90 aattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgag 20762007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 29451108 - 29451154
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgc 110  Q
    ||||||||||| | ||||||||||||||||||||| | |||||||||    
T  29451108 tgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgc 29451154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 26963370 - 26963309
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||  | |||| ||||||||||||||| |||||||||| | ||||||| ||||||    
T  26963370 tgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgt 26963309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 19865238 - 19865326
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||   |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19865238 cactactaaaaaaataaaaattagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 19865326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 41358981 - 41359071
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaa-tccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41358981 cactactaaaaaaacaaaaattagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 41359071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 28229600 - 28229511
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  28229600 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 28229511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 46789994 - 46790083
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  46789994 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgagg 46790083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 13523081 - 13523018
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13523081 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 13523018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 50845460 - 50845386
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50845460 aaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 50845386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 6459235 - 6459300
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6459235 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 6459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 12720827 - 12720892
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12720827 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 12720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 14760885 - 14760950
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14760885 tgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgagg 14760950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 41071956 - 41071891
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41071956 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 41071891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 45839310 - 45839375
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45839310 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 45839375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 41752451 - 41752514
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41752451 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtga 41752514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 18895030 - 18894956
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18895030 aaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagg 18894956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 4340425 - 4340490
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4340425 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 4340490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 9110096 - 9110031
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9110096 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 9110031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 9464121 - 9464186
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  9464121 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 9464186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 41120882 - 41120793
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  41120882 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 41120793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 6412174 - 6412109
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  6412174 tgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgagg 6412109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 12161832 - 12161897
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  12161832 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 12161897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 12174887 - 12174822
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||||    
T  12174887 tgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgagg 12174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 12806983 - 12806894
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacct-gaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  ||||||||| |||||||||| || ||||||||||| |||||||||||||||||||| |||||||  ||||||||||    
T  12806983 cactactaaaaaaacaaaaattagtgagggaaaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgag 12806894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 15243103 - 15243168
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  15243103 tgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgagg 15243168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 20408281 - 20408216
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  20408281 tgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgagg 20408216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 22158820 - 22158885
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  22158820 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 22158885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 22603566 - 22603631
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  22603566 tgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgagg 22603631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 23457915 - 23457980
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  23457915 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 23457980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 52183696 - 52183761
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  52183696 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgagg 52183761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 7830049 - 7830113
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||||||||||| |||||||||||    
T  7830049 tgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgag 7830113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 8941139 - 8941051
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  ||||||||| ||||||||||| | |||| |||||||||||||||| ||||||||| ||| ||| |||||||||||    
T  8941139 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgag 8941051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 26825259 - 26825323
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  26825259 gagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagg 26825323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 46786103 - 46786015
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||| ||| |||||||    
T  46786103 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgag 46786015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 11917805 - 11917868
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  11917805 gagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgag 11917868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 13308951 - 13308876
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||| ||||| |||||||||||||||||| | ||||||||||||||||||||  |||||||||||    
T  13308951 caaaaattagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgagg 13308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 19081747 - 19081810
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  19081747 gagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgag 19081810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 19129635 - 19129698
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  19129635 gagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgag 19129698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 46339564 - 46339501
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  46339564 agggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagg 46339501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 9985448 - 9985383
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| | |||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  9985448 tgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgagg 9985383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 123
Target Start/End: Complemental strand, 12370060 - 12370003
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||    
T  12370060 agggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt 12370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 9259304 - 9259240
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||   ||||||||||    
T  9259304 tgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgag 9259240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 9882182 - 9882110
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcga 112  Q
    ||||||||||||  ||||||||| ||||| ||||| | |||| ||||||||||||||||||||||||||||||    
T  9882182 cactactaaaaaaacaaaaattagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcga 9882110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 25788105 - 25788053
Alignment:
Q  77 gaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 25788053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 29549436 - 29549500
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| | |||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  29549436 tgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgag 29549500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 38531290 - 38531226
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||| || ||||||||||||    
T  38531290 gagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgagg 38531226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 48522536 - 48522600
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| |||||| |||||  |||||||||||||||||||||||||||| ||||||||||    
T  48522536 tgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgag 48522600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 13102334 - 13102397
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| | ||||| || |||||||||||||||||||||||||||||| ||||||||||    
T  13102334 tgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtga 13102397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 41063206 - 41063280
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||| ||||| | ||||| ||||||||||||||||||||||||||||| |||||||| |||||||    
T  41063206 aaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagg 41063280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 7181674 - 7181625
Alignment:
Q  66 agggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  7181674 agggaaaacgtgaaatccctctctaattccgtcactaaattttgtgacca 7181625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 9177094 - 9177183
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||| ||||| | |||||||||| ||||| ||||||||||||||||||||||  |||||||||||    
T  9177094 cactactaaaaaaactaaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgagg 9177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 17661068 - 17661133
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||||   |||||||||||    
T  17661068 tgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgagg 17661133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 18890670 - 18890605
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||| |||||||||||||||||||||| |||||||||||||||||   |||||||||||    
T  18890670 tgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgagg 18890605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 32046894 - 32046959
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||| ||||||||||||| |||||||||||||||||||  |||||||||||    
T  32046894 tgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgagg 32046959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 50092419 - 50092354
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| || ||   |||||||||||    
T  50092419 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgagg 50092354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 16913697 - 16913633
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |||||||||||||||||||||| | |||||||| |||| || ||||||||||||    
T  16913697 gagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgagg 16913633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 12989871 - 12989934
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||| ||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  12989871 gagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgag 12989934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Original strand, 20580928 - 20580991
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| |||||||||||||||||| ||| | ||||||||||||| || |||||||||||    
T  20580928 gagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgag 20580991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 22789711 - 22789648
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| ||||||| || |||||||| ||||||||||||||||||||  |||||||||||    
T  22789711 gagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgag 22789648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 49881039 - 49881121
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||||  ||||||||| ||||||| ||| ||||||||||||||||| | || ||||||||||| |||||| ||||||    
T  49881039 cactactaaaaaa-caaaaattagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaattt 49881121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 14486752 - 14486698
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaaga 119  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||||| ||||||    
T  14486752 gagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 45919049 - 45918960
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||||  |||||| || ||||||| ||| | ||||||||||||||||| || |||||||||||| ||||| |||||| |||||    
T  45919049 cactaataaaaaaacaaaaactagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagg 45918960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 51973442 - 51973507
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  ||||||  |||||||||||||||||||||||||||||||| ||| ||| |||||    
T  51973442 tgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgagg 51973507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 17200106 - 17200066
Alignment:
Q  89 taattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  17200106 taattccgtcactaaattttgcgaccaatgaatttgtgagg 17200066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 46865262 - 46865326
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||| ||| |||||||||||||||||||| | ||||||||||||| ||||  |||||||||||    
T  46865262 gagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagg 46865326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 16258606 - 16258543
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||||| ||||| |||||| |||||||||||||||||||||| ||||| |||| ||||||    
T  16258606 gaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgag 16258543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 128
Target Start/End: Complemental strand, 27253955 - 27253912
Alignment:
Q  85 tctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  27253955 tctctaattccgtcactaaattttgcgaccatggaatttgtgag 27253912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 30928508 - 30928438
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||| ||| |||| |||||| ||||||  |||||||||||  |||||||||||||||||||| ||||||||    
T  30928508 aaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgt 30928438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 30673503 - 30673575
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    |||| ||| ||||||||||| |||||||||||||||||||  | ||||||||||  || |||| |||||||||    
T  30673503 aaaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtga 30673575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 6775919 - 6775970
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||||||||||||  |||| |||||| ||||||||||||||||||    
T  6775919 aaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagg 6775970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 13195615 - 13195666
Alignment:
Q  78 aaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||||| |||||||||||||||| || | ||||| ||||||    
T  13195615 aaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgagg 13195666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 39748942 - 39749004
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaa 117  Q
    |||| ||| ||| ||||||| ||||||||| ||| |||| |||||||||||||||||| ||||    
T  39748942 aaaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaa 39749004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 17734075 - 17734010
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaa-ttttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||| ||| |||||||| ||| |||| ||||||||||||  ||||||||||    
T  17734075 tgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgag 17734010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 20290441 - 20290376
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| |||||| |||||||  |||||||||||||||||||||||| || |||   |||||||||||    
T  20290441 tgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgagg 20290376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 18788035 - 18787974
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    |||| |||||||||| ||| |||  |||||||||  |||||||||||||||||||||| |||||    
T  18788035 ttaaagagggaaaacgtgacatcaatctctaatt--gtcactaaattttgcgaccaaaaaattt 18787974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 84819 - 84730
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  84819 cactactaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 84730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 121107 - 121044
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  121107 gagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgag 121044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 41637623 - 41637697
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41637623 aaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 41637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 13613214 - 13613149
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13613214 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 13613149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 30783352 - 30783417
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30783352 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgagg 30783417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 32008962 - 32009031
Alignment:
Q  60 ttaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32008962 ttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 32009031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 43408655 - 43408567
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43408655 cactactaaaaaa-caaaaattagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 43408567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 31266369 - 31266433
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31266369 gagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 31266433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 44476520 - 44476433
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||||  ||||||||| ||| ||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  44476520 cactactaaaaaaacaaaaattagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtga 44476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 28841460 - 28841398
Alignment:
Q  67 gggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28841460 gggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 28841398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 7093562 - 7093647
Alignment:
Q  44 actaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||  ||||||||| ||||||||||| | ||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  7093562 actaaaaaaacaaaaattagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgagg 7093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 28319700 - 28319635
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  28319700 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 28319635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 32300465 - 32300530
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  32300465 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 32300530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 37552217 - 37552306
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37552217 cactactaaaaaaactaaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgagg 37552306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 37724113 - 37724048
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  37724113 tgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgagg 37724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 27523025 - 27523084
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27523025 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaattt 27523084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 29749533 - 29749459
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  29749533 aaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgagg 29749459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 12779590 - 12779679
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||| ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  12779590 cactactaaaaaaactaaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgagg 12779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 14757242 - 14757177
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  14757242 tgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgagg 14757177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 23858102 - 23858013
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||  |||||||||||||||||||||||||||||||| ||||||||||||    
T  23858102 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 23858013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 36550826 - 36550915
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  ||| | ||| ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| || ||||||||    
T  36550826 cactactaaaaaaacaatatttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgagg 36550915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 18916520 - 18916456
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  18916520 gagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagg 18916456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 22140480 - 22140420
Alignment:
Q  69 gaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  22140480 gaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgagg 22140420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 23388499 - 23388448
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23388499 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 23388448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 26243452 - 26243377
Alignment:
Q  54 caaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||| ||||| ||||| | |||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  26243452 caaaaattagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgagg 26243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 13788185 - 13788111
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||  | |||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  13788185 aaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgagg 13788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 35697475 - 35697533
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgag 35697533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 1141550 - 1141615
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||   |||||||||||    
T  1141550 tgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgagg 1141615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 8430310 - 8430375
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||| || | |||||||||||    
T  8430310 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgagg 8430375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 15636856 - 15636791
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||   |||||||||||    
T  15636856 tgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgagg 15636791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 18551374 - 18551309
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  18551374 tgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgagg 18551309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 27327630 - 27327695
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||| | || ||||||||||||    
T  27327630 tgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgagg 27327695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 28262378 - 28262443
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  28262378 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgagg 28262443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 21293832 - 21293768
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||| ||||||  |||||||||||    
T  21293832 tgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgag 21293768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 26687808 - 26687748
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  26687808 ggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgag 26687748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 32185846 - 32185897
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  32185846 tgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgacca 32185897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 38362417 - 38362327
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||||||||  |||||||||  |||||||||| | |||||| | |||||||| |||||| |||||| ||||||||||||||||||||    
T  38362417 ccaccactaaaaaaacaaaaattagcgagggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgagg 38362327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 41736177 - 41736251
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||  | |||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  41736177 aaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgagg 41736251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 20065195 - 20065130
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||||||||||   |||||||||||    
T  20065195 tgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgagg 20065130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 125
Target Start/End: Original strand, 44722958 - 44723007
Alignment:
Q  76 tgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  44722958 tgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgt 44723007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 37802498 - 37802441
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatt 122  Q
    |||||||||| | |||||  ||||||||||||||||||||||||||||||||| ||||    
T  37802498 gagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaatt 37802441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 44366118 - 44366053
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||||||||||||||||| ||| | ||||||| |||||| ||||||||||||    
T  44366118 tgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgagg 44366053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 29998676 - 29998633
Alignment:
Q  68 ggaaaacctgaaatccctctctaattccgtcactaaattttgcg 111  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  29998676 ggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 40018807 - 40018877
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    |||| ||| ||||||||||| ||||||| |||||||||||  ||||| |||||||| ||||| ||||||||    
T  40018807 aaaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgt 40018877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 18609528 - 18609593
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||| ||||||||||| | | || ||||||||||| ||| ||||||||||||    
T  18609528 tgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagg 18609593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 31966667 - 31966586
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||||  ||||||  | ||||||| ||| ||||||| ||||||||||  || |||||||||||||||||| ||||||    
T  31966667 cactactaaaaaaacaaaaa--agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaattt 31966586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 8763639 - 8763710
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtg 126  Q
    |||| ||| ||| ||||||| |||||||| ||||||||||||||| ||||||||  || ||| |||||||||    
T  8763639 aaaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtg 8763710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 27040003 - 27039964
Alignment:
Q  90 aattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgagg 27039964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 19621 - 19686
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19621 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 19686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 26501 - 26566
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26501 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 26566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 1040 - 975
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  1040 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgagg 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 37908 - 37843
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  37908 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgagg 37843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 10176 - 10241
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  10176 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgagg 10241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 22205 - 22294
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  22205 cactactaaaaaaactaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgagg 22294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 128
Target Start/End: Original strand, 182523 - 182612
Alignment:
Q  39 ccactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||||| ||||||  ||||||||| |||||||||   | ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  182523 ccactattaaaaaaacaaaaattagtgagggaaattgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 182612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 219654 - 219719
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| |||||||||||    
T  219654 tgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgagg 219719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 215801 - 215744
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgt 97  Q
    |||||||||||| |||||||||| ||||||||||| | ||||||||||||||||||||    
T  215801 cactactaaaaaagcaaaaattagtgagggaaaacgtaaaatccctctctaattccgt 215744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 3760 - 3825
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3760 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 3825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 202783 - 202856
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    |||| ||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  202783 aaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgag 202856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 276255 - 276207
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcga 112  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||    
T  276255 tgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 8231 - 8170
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8231 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 8170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 21963 - 21902
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21963 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgt 21902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 84321 - 84386
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||  |||||||||||||||||||||||||||||||||| |||||   |||||||||||    
T  84321 tgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgagg 84386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 6100 - 6035
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  6100 tgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgagg 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 9350 - 9285
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  9350 tgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgagg 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 10808 - 10719
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||||  | ||| ||| ||||||||||| | |||| ||||||||||||||||||||||||||||||| || ||||||||||||    
T  10808 cactactaaaaaaactaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgagg 10719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 74662 - 74597
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  74662 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgagg 74597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 58600 - 58665
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  58600 tgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgagg 58665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 439957 - 440046
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| |  ||||||||| ||||||||||  | ||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  439957 cactactaaacaaacaaaaattagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgagg 440046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 173462 - 173521
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||    
T  173462 tgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaattt 173521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 7523 - 7588
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  7523 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgagg 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 15111 - 15046
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  15111 tgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgagg 15046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 12671 - 12735
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  12671 tgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgagg 12735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 1663 - 1575
Alignment:
Q  41 actactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||||  ||||||||| ||||||| ||| ||||| ||||||||||||  || |||||||||||||||||| |||||| |||||    
T  1663 actactaaaaaaacaaaaattagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagg 1575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 43926 - 44000
Alignment:
Q  55 aaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||| ||| ||||||||||| | |||| | ||||||||||||| | |||||||||||||||||||||||||||||    
T  43926 aaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgagg 44000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 74832 - 74774
Alignment:
Q  70 aaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgag 128  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  74832 aaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgag 74774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 10910 - 10975
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    ||||| ||||| |||||| |||||||||||| |||||||||||||| |||||| ||||||||||||    
T  10910 tgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgagg 10975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 3282 - 3218
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagg 129  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||||||||   |||||||||||    
T  3282 gagggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgagg 3218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 39825 - 39773
Alignment:
Q  63 atgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgacca 115  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  39825 atgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaacca 39773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 7474 - 7537
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtga 127  Q
    ||||||||||| ||||||||||||||||||| ||||||||| |||||||| || || |||||||    
T  7474 tgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtga 7537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 19283 - 19207
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaa 116  Q
    ||||||||||||   |||||||| ||||||| ||| ||||||||||||||||||  ||  |||||||||||||||||    
T  19283 cactactaaaaaaataaaaattagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 36297 - 36379
Alignment:
Q  40 cactactaaaaacgcaaaaattaatgagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaaagaattt 123  Q
    ||||||||||||  ||||||||| ||||||| ||| ||||||| ||||||||||  || ||||||||||| |||||| ||||||    
T  36297 cactactaaaaaa-caaaaattagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaattt 36379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 6813 - 6859
Alignment:
Q  64 tgagggaaaacctgaaatccctctctaattccgtcactaaattttgc 110  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  6813 tgagggaaaacatgaaattcctctctaattccgtcattaaattttgc 6859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 112347 - 112398
Alignment:
Q  65 gagggaaaacctgaaatccctctctaattccgtcactaaattttgcgaccaa 116  Q
    |||| ||||| | |||||||||||||||||||||| |||||||||| |||||    
T  112347 gaggaaaaacgttaaatccctctctaattccgtcattaaattttgcaaccaa 112398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University