View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1245_low_18 (Length: 455)

Name: NF1245_low_18
Description: NF1245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1245_low_18
NF1245_low_18
[»] chr7 (31 HSPs)
chr7 (10-423)||(20599394-20599805)
chr7 (333-424)||(23367-23456)
chr7 (336-423)||(6054640-6054725)
chr7 (334-423)||(37533002-37533088)
chr7 (334-423)||(37533355-37533442)
chr7 (334-422)||(47129450-47129535)
chr7 (344-423)||(1085617-1085694)
chr7 (345-423)||(37167861-37167937)
chr7 (334-420)||(45754798-45754881)
chr7 (334-423)||(30244350-30244437)
chr7 (334-423)||(36623040-36623127)
chr7 (323-424)||(45433320-45433419)
chr7 (367-423)||(19122811-19122865)
chr7 (334-420)||(30032650-30032734)
chr7 (334-423)||(11845271-11845358)
chr7 (334-423)||(22567030-22567117)
chr7 (346-423)||(29157645-29157720)
chr7 (334-423)||(34218025-34218112)
chr7 (343-400)||(28300568-28300625)
chr7 (344-412)||(118300-118368)
chr7 (344-423)||(24177515-24177592)
chr7 (339-418)||(40094770-40094847)
chr7 (353-423)||(7517660-7517728)
chr7 (342-401)||(30244452-30244511)
chr7 (344-421)||(45434718-45434793)
chr7 (372-420)||(7554108-7554154)
chr7 (367-423)||(9901723-9901777)
chr7 (334-423)||(30245157-30245240)
chr7 (334-423)||(30253572-30253655)
chr7 (367-418)||(24838725-24838774)
chr7 (345-412)||(37532753-37532818)
[»] chr8 (33 HSPs)
chr8 (334-421)||(40518153-40518238)
chr8 (332-423)||(3038279-3038368)
chr8 (344-423)||(5915947-5916024)
chr8 (345-400)||(20870575-20870630)
chr8 (353-423)||(34834956-34835024)
chr8 (334-423)||(3669767-3669854)
chr8 (344-418)||(45123089-45123163)
chr8 (344-423)||(6651574-6651651)
chr8 (321-412)||(6876841-6876929)
chr8 (353-423)||(30441165-30441233)
chr8 (347-424)||(3670139-3670214)
chr8 (334-400)||(40579260-40579326)
chr8 (344-424)||(8918765-8918843)
chr8 (344-423)||(34835289-34835366)
chr8 (344-423)||(34835555-34835632)
chr8 (344-423)||(34835821-34835898)
chr8 (344-423)||(41129068-41129145)
chr8 (353-423)||(6731975-6732043)
chr8 (344-421)||(8919145-8919220)
chr8 (367-423)||(33113391-33113445)
chr8 (353-424)||(147530-147599)
chr8 (345-424)||(147899-147976)
chr8 (334-420)||(30359354-30359439)
chr8 (353-419)||(1014255-1014319)
chr8 (345-423)||(32640534-32640610)
chr8 (334-423)||(9309059-9309148)
chr8 (367-420)||(9609168-9609219)
chr8 (353-418)||(45122067-45122130)
chr8 (347-400)||(9482608-9482661)
chr8 (347-423)||(9483191-9483265)
chr8 (334-399)||(43274626-43274691)
chr8 (367-423)||(45122704-45122758)
chr8 (334-390)||(3037960-3038016)
[»] chr1 (28 HSPs)
chr1 (334-423)||(44290815-44290903)
chr1 (344-423)||(41759563-41759640)
chr1 (334-423)||(41142452-41142540)
chr1 (367-423)||(26661922-26661976)
chr1 (334-420)||(37555812-37555895)
chr1 (334-420)||(37556194-37556277)
chr1 (344-418)||(45084461-45084533)
chr1 (334-423)||(44290449-44290536)
chr1 (367-423)||(26661546-26661600)
chr1 (344-423)||(3537600-3537677)
chr1 (344-423)||(9955989-9956066)
chr1 (344-423)||(41157071-41157148)
chr1 (335-421)||(11977026-11977110)
chr1 (344-421)||(34649520-34649595)
chr1 (342-400)||(41157476-41157534)
chr1 (322-423)||(45493954-45494052)
chr1 (346-423)||(48588491-48588566)
chr1 (344-424)||(14318946-14319024)
chr1 (334-418)||(50052015-50052096)
chr1 (344-423)||(32168699-32168776)
chr1 (352-400)||(39066209-39066257)
chr1 (353-423)||(40082486-40082554)
chr1 (367-420)||(5319989-5320040)
chr1 (344-421)||(11977362-11977437)
chr1 (344-421)||(31767162-31767237)
chr1 (379-423)||(3550800-3550842)
chr1 (367-419)||(38804379-38804429)
chr1 (360-400)||(29798300-29798340)
[»] chr4 (39 HSPs)
chr4 (334-421)||(16889525-16889610)
chr4 (344-423)||(36629317-36629394)
chr4 (344-423)||(44620433-44620510)
chr4 (345-423)||(39792860-39792936)
chr4 (346-423)||(25483416-25483491)
chr4 (336-423)||(1731638-1731723)
chr4 (344-423)||(23817680-23817757)
chr4 (334-417)||(39404104-39404185)
chr4 (353-423)||(50630763-50630831)
chr4 (337-423)||(54343000-54343084)
chr4 (344-420)||(39404481-39404555)
chr4 (344-423)||(22028368-22028445)
chr4 (344-423)||(41370437-41370514)
chr4 (337-423)||(18932741-18932825)
chr4 (341-423)||(34646645-34646725)
chr4 (337-400)||(43827540-43827603)
chr4 (334-400)||(43174242-43174308)
chr4 (334-419)||(44620743-44620826)
chr4 (342-400)||(50459822-50459880)
chr4 (346-421)||(3340889-3340962)
chr4 (334-420)||(10246002-10246086)
chr4 (342-424)||(22027958-22028038)
chr4 (367-424)||(19504775-19504830)
chr4 (334-423)||(36608650-36608737)
chr4 (346-423)||(54017596-54017671)
chr4 (334-423)||(55933113-55933200)
chr4 (367-423)||(54108617-54108671)
chr4 (367-423)||(54108993-54109046)
chr4 (344-423)||(36572099-36572176)
chr4 (344-423)||(44621082-44621159)
chr4 (372-423)||(45496885-45496934)
chr4 (332-400)||(49076818-49076886)
chr4 (344-423)||(50002506-50002583)
chr4 (353-423)||(32941131-32941199)
chr4 (369-423)||(52884775-52884828)
chr4 (334-423)||(54936276-54936362)
chr4 (344-420)||(20825919-20825993)
chr4 (334-423)||(31691232-31691321)
chr4 (29-80)||(6133439-6133491)
[»] chr3 (32 HSPs)
chr3 (336-423)||(37990632-37990717)
chr3 (345-400)||(15772955-15773010)
chr3 (342-420)||(37990976-37991052)
chr3 (333-424)||(43978855-43978948)
chr3 (332-423)||(42342079-42342168)
chr3 (334-397)||(8328374-8328437)
chr3 (345-423)||(43346793-43346869)
chr3 (334-423)||(29644893-29644980)
chr3 (346-423)||(32462903-32462978)
chr3 (367-423)||(22304649-22304703)
chr3 (344-420)||(54018199-54018273)
chr3 (344-423)||(32589783-32589860)
chr3 (353-423)||(22303965-22304033)
chr3 (353-423)||(39934965-39935033)
chr3 (353-423)||(15773272-15773342)
chr3 (334-423)||(52634755-52634842)
chr3 (367-420)||(54017840-54017891)
chr3 (344-400)||(3135455-3135511)
chr3 (344-423)||(41359766-41359843)
chr3 (344-422)||(35946603-35946679)
chr3 (373-423)||(39336000-39336048)
chr3 (367-420)||(31190092-31190143)
chr3 (367-424)||(53577443-53577498)
chr3 (322-423)||(54017527-54017626)
chr3 (367-423)||(12114586-12114640)
chr3 (344-392)||(22304302-22304350)
chr3 (334-398)||(25755497-25755561)
chr3 (364-423)||(29644602-29644659)
chr3 (344-419)||(41359492-41359565)
chr3 (344-423)||(42342389-42342466)
chr3 (369-424)||(47964544-47964597)
chr3 (367-418)||(50612471-50612520)
[»] chr6 (27 HSPs)
chr6 (334-424)||(16454986-16455074)
chr6 (335-419)||(29518587-29518669)
chr6 (335-419)||(29519004-29519086)
chr6 (335-419)||(32741263-32741345)
chr6 (344-419)||(2578836-2578909)
chr6 (344-423)||(2843635-2843712)
chr6 (344-423)||(3409740-3409817)
chr6 (334-397)||(16108155-16108219)
chr6 (337-423)||(1846828-1846912)
chr6 (353-423)||(2579502-2579570)
chr6 (353-423)||(3409339-3409407)
chr6 (334-400)||(2579101-2579166)
chr6 (334-400)||(16454676-16454742)
chr6 (344-420)||(2578444-2578518)
chr6 (344-423)||(3058306-3058383)
chr6 (344-419)||(12071692-12071765)
chr6 (337-423)||(2377834-2377918)
chr6 (337-396)||(2378231-2378290)
chr6 (369-423)||(16107758-16107810)
chr6 (344-420)||(2579873-2579947)
chr6 (367-423)||(3415538-3415592)
chr6 (344-423)||(35210284-35210361)
chr6 (353-423)||(10074373-10074441)
chr6 (346-420)||(12085037-12085109)
chr6 (344-398)||(5832028-5832082)
chr6 (334-387)||(14748333-14748386)
chr6 (344-423)||(10073992-10074069)
[»] chr5 (28 HSPs)
chr5 (344-423)||(6500530-6500607)
chr5 (334-420)||(15370182-15370266)
chr5 (341-400)||(36492215-36492274)
chr5 (334-421)||(25328017-25328102)
chr5 (334-417)||(26900008-26900089)
chr5 (334-398)||(27502027-27502091)
chr5 (344-423)||(40296316-40296393)
chr5 (347-423)||(34753029-34753103)
chr5 (334-421)||(42405589-42405672)
chr5 (344-400)||(3295346-3295402)
chr5 (344-400)||(41632883-41632939)
chr5 (333-400)||(38427320-38427387)
chr5 (353-423)||(26075171-26075240)
chr5 (347-423)||(18603124-18603198)
chr5 (367-423)||(41170714-41170768)
chr5 (344-423)||(3295016-3295093)
chr5 (344-423)||(6500902-6500979)
chr5 (347-399)||(24489583-24489635)
chr5 (340-400)||(33747872-33747932)
chr5 (334-412)||(624287-624363)
chr5 (353-423)||(26074156-26074224)
chr5 (353-423)||(26074692-26074760)
chr5 (334-423)||(36568560-36568645)
chr5 (367-424)||(13415784-13415839)
chr5 (367-400)||(301052-301085)
chr5 (364-400)||(795149-795186)
chr5 (367-400)||(795256-795289)
chr5 (344-423)||(32487473-32487550)
[»] chr2 (28 HSPs)
chr2 (332-423)||(36178594-36178683)
chr2 (334-424)||(6421810-6421898)
chr2 (334-423)||(6421465-6421552)
chr2 (334-423)||(37106004-37106091)
chr2 (335-423)||(15880343-15880429)
chr2 (344-423)||(41283476-41283553)
chr2 (334-424)||(5542616-5542704)
chr2 (334-423)||(14745658-14745745)
chr2 (334-423)||(36005871-36005958)
chr2 (334-423)||(36178162-36178249)
chr2 (344-420)||(6422193-6422267)
chr2 (345-424)||(33731727-33731804)
chr2 (354-398)||(40163383-40163427)
chr2 (349-400)||(1769993-1770044)
chr2 (334-424)||(5542989-5543077)
chr2 (334-420)||(23346319-23346403)
chr2 (342-421)||(38796617-38796696)
chr2 (346-423)||(962678-962753)
chr2 (334-400)||(15511487-15511552)
chr2 (334-423)||(35580429-35580518)
chr2 (344-412)||(31899103-31899169)
chr2 (344-400)||(29676630-29676686)
chr2 (344-423)||(35580725-35580802)
chr2 (345-419)||(37106272-37106344)
chr2 (367-420)||(40733965-40734016)
chr2 (367-423)||(3672781-3672835)
chr2 (371-419)||(40733601-40733647)
chr2 (344-400)||(3673169-3673225)
[»] scaffold0027 (1 HSPs)
scaffold0027 (344-423)||(47440-47517)
[»] scaffold0702 (2 HSPs)
scaffold0702 (337-396)||(141-200)
scaffold0702 (337-423)||(508-592)
[»] scaffold0391 (1 HSPs)
scaffold0391 (334-423)||(1097-1184)
[»] scaffold0734 (1 HSPs)
scaffold0734 (367-400)||(5498-5531)


Alignment Details
Target: chr7 (Bit Score: 366; Significance: 0; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 10 - 423
Target Start/End: Complemental strand, 20599805 - 20599394
Alignment:
Q  10 gagatgaagagtagcgttatgtggggagaagcaattgttggtagcaatatataaatatatagtactatgatacatggtgttattaatagagtagtgtttt 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20599805 gagatgaagagtagcgttatgtggggagaagcaattgttggtagcaatatataaatatatagtactatgatacatggtgttattaatagagtagtgtttt 20599706  T
Q  110 gtggggagaaactattattgctggttagcaatatattactatgttttgtcacgcacgagtactgcgatattttttaagatttgtttaatttgaaagtggc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20599705 gtggggagaaactattattgctggttagcaatatattactatgttttgtcacgcacgagtactgcgatattttttaagatttgtttaatttgaaagtggc 20599606  T
Q  210 tgttattgtcctctagttattgttaattgatttctaaatgatttttataaggggagcagcggtgatattatnnnnnnncatggtatattcaaatatttca 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||||||    
T  20599605 tgttattgtcctctagttattgttaattgatttctaaatgatttttataaggggagcagcggtgatattataaaaaaacatggtatatccaaatatttca 20599506  T
Q  310 taactttagatctgggtcataggagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaa 409  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20599505 taactttagatctgggtcat--gagggagctcgagagaccgttcacatcaaggttaaaacaaccatacaagcaagagagacaccacactctcttacccaa 20599408  T
Q  410 aacattaaggcaat 423  Q
    ||| ||||||||||    
T  20599407 aacgttaaggcaat 20599394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 23367 - 23456
Alignment:
Q  333 agggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||||| |||||||| || ||| ||| || ||||||| |||| |||||||||||||||||  |||||||||||||| |||||||||||    
T  23367 agggagctcgggggaccgtccaaatcgaggctagaacaaccgcacatgcaagagagacaccaca--ctcttacccaaaaccttaaggcaata 23456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 6054725 - 6054640
Alignment:
Q  336 gagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||||| |||||||||| || |||||||| ||||| | |||||||||||||  |||||||||||||| ||||||||||    
T  6054725 gagctcgggggaccgtccacatcaaggctagaacaaccatacaagtaggagagacaccaca--ctcttacccaaaaccttaaggcaat 6054640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 37533002 - 37533088
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| || |||||||| |||||| |||||| ||||| | ||||||||||||||||||||||||   ||||||||||| ||||||||||    
T  37533002 gggagcgcgggggaccgtccacatcgaggttagaacaagcgcacaagcaagagagacaccacact---ttacccaaaaccttaaggcaat 37533088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 37533355 - 37533442
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| || |||||||| |||||| ||| || ||||||| ||||||||| ||||||||||||  |||||||||||||| ||||||||||    
T  37533355 gggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccaca--ctcttacccaaaaccttaaggcaat 37533442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 422
Target Start/End: Complemental strand, 47129535 - 47129450
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaa 422  Q
    ||||||||| |||||||| |||||| ||| || | ||||| ||||||||||||||||||||||  |||||||||||||| |||||||||    
T  47129535 gggagctcg-gggaccgtccacatcgaggctagatcaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaa 47129450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 1085617 - 1085694
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || |||||||||||||| ||||||||| |||||  |||||||||||||| ||||||||||    
T  1085617 gggaccgtccacatcgaggctagaacaaccacacaagtaagagagacgccaca--ctcttacccaaaaccttaaggcaat 1085694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 423
Target Start/End: Complemental strand, 37167937 - 37167861
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||| ||||    
T  37167937 ggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaactttaagtcaat 37167861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 45754881 - 45754798
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||| ||||| | ||||| ||| |  ||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  45754881 gggagctcgagtgaccgct-acatcgaggcttgaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggc 45754798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 30244437 - 30244350
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||| | |||||| ||| |  ||||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||    
T  30244437 gggagctcgggggaccatccacatcgaggcttgaacaaccacacaagtgagagagacaccaca--ctcttacccaaaaccttaaggcaat 30244350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 36623127 - 36623040
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| ||||||||| ||||||||||| | ||||| |||||||| ||||||| ||||| |  ||| |||||||||| ||||||||||    
T  36623127 gggagctcaagggaccgtccacatcaaggtcagaacaatcacacaagtaagagaggcaccata--ctcctacccaaaaccttaaggcaat 36623040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 323 - 424
Target Start/End: Complemental strand, 45433419 - 45433320
Alignment:
Q  323 gggtcataggagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaa 422  Q
    |||||||||  ||||||  | |||||||  |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||  |||||||||    
T  45433419 gggtcatagaggggagccagggggaccgaccacatcgaggctagaacaaccccacaagcaagagagacaccaca--ctcttacccaaaatcttaaggcaa 45433322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 19122865 - 19122811
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  19122865 aacaaccacacaagcaagatagacaccaca--ctcttacccaaaaccttaaggcaat 19122811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 30032734 - 30032650
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||| |||||||| |||||| ||| || ||||||| |||||||||||||||   ||||  |||||||||||||| |||||||    
T  30032734 gggagctcgggggaccgtccacatcgaggatagaacaaccgcacaagcaagagagatgtcaca--ctcttacccaaaaccttaaggc 30032650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 11845358 - 11845271
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| || ||||||||  ||||| ||| || ||||||  ||||||||||||||||||||||  |||||| ||||||| ||||||||||    
T  11845358 gggagcacgggggaccgtctacatcgaggctagaacaactgcacaagcaagagagacaccaca--ctcttatccaaaaccttaaggcaat 11845271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 22567030 - 22567117
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||| | |||||| |||    ||||||| ||||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  22567030 gggagctcgggggaccatccacatcgaggcccgaacaaccccacaagcaagagagacaccaca--ctcttaccaaaaaccttaaggcaat 22567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 29157720 - 29157645
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||||||  || | |||| |||| ||||||||||||||||||  |||||||||||||| ||||||||||    
T  29157720 gaccgtccacatcaagactagagcaactacacgagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 29157645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 34218025 - 34218112
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||  ||||||| |||||| ||| |  |||||||| |||||| ||||||||||||||  |||||||||||||| ||||| ||||    
T  34218025 gggagctcggaggaccgtccacatcgaggcttgaacaaccatacaagcgagagagacaccaca--ctcttacccaaaaccttaagacaat 34218112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 28300568 - 28300625
Alignment:
Q  343 agggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||| ||| |||||| ||| || || |||||||||||||||||||||||||||||||    
T  28300568 agggatcgtccacatcgaggctagaataaccacacaagcaagagagacaccacactct 28300625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 118300 - 118368
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaac 412  Q
    |||||||| |||||||| | || ||||||||||||||||||||| | ||  ||| ||||||||||||||    
T  118300 gggaccgtccacatcaaagctagaacaaccacacaagcaagagatagacgccacactcttacccaaaac 118368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 24177592 - 24177515
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| ||| || ||| ||| |||||| |||||||||||||||| |||||  |||||||| ||||| ||||||||||    
T  24177592 gggaccgtccacgtcgaggctaagacaaccgcacaagcaagagagacgccaca--ctcttaccaaaaactttaaggcaat 24177515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 40094770 - 40094847
Alignment:
Q  339 ctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    |||| |||||||  |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| |||||    
T  40094770 ctcgggggaccgaccacatcgaggctagaacaacctcacaagcaagagagacgccaca--ctcttacccaaaaccttaag 40094847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 7517728 - 7517660
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||||||||||  ||| ||||||||||  |||||||||||||| ||||||||||    
T  7517728 cacatcgaggctagaacaaccacacaagtgagacagacaccaca--ctcttacccaaaaccttaaggcaat 7517660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 30244511 - 30244452
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctc 401  Q
    |||||||||| |||||| ||| |  ||||||||||||||  |||||||||||||||||||    
T  30244511 gagggaccgtccacatcgaggcttgaacaaccacacaagtgagagagacaccacactctc 30244452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 421
Target Start/End: Complemental strand, 45434793 - 45434718
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||| ||||||| ||| || ||||||  |||||| |||||||||| ||||||||  |||||||||| ||||||||    
T  45434793 gggaccgatcacatcgaggctagaacaactccacaagtaagagagacatcacactct--tacccaaaaccttaaggca 45434718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 420
Target Start/End: Complemental strand, 7554154 - 7554108
Alignment:
Q  372 ccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||||| ||||||||||||||  |||||||||||||| |||||||    
T  7554154 ccacacaagcgagagagacaccaca--ctcttacccaaaaccttaaggc 7554108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 9901777 - 9901723
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| ||| ||||||||||||||||||  |||||||||||||| ||||| ||||    
T  9901777 aacaaccgcactagcaagagagacaccaca--ctcttacccaaaaccttaagacaat 9901723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 30245240 - 30245157
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||| | |||||| ||| |  ||||||||||||||    ||||||||||||||||  |||||||||| ||||||||||    
T  30245240 gggagctcgggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactct--tacccaaaaccttaaggcaat 30245157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 30253655 - 30253572
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||| | |||||| ||| |  ||||||||||||||    ||||||||||||||||  |||||||||| ||||||||||    
T  30253655 gggagctcgggggaccatccacatcgaggcttgaacaaccacacaag----agagacaccacactct--tacccaaaaccttaaggcaat 30253572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 24838725 - 24838774
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    ||||||||||||||||||||||||  ||||  |||||||||||||| |||||    
T  24838725 aacaaccacacaagcaagagagacgtcaca--ctcttacccaaaaccttaag 24838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 412
Target Start/End: Original strand, 37532753 - 37532818
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaac 412  Q
    ||||||| |||||| ||| || ||||||  ||||||| ||||||||||||||  ||||||||||||||    
T  37532753 ggaccgtccacatcgaggctagaacaacagcacaagctagagagacaccaca--ctcttacccaaaac 37532818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 334 - 421
Target Start/End: Complemental strand, 40518238 - 40518153
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| |||||  |||||||||||||| ||||||||    
T  40518238 gggagctcgggggaccgtccacatcaaggctagaacaaccacacaagcaagagagacgccaca--ctcttacccaaaaccttaaggca 40518153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 3038279 - 3038368
Alignment:
Q  332 gagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||||  ||||||| |||||| ||| || |||||||||||||||||||||||  |||||  |||||||||||||| ||||||||||    
T  3038279 gagggagctcggaggaccgtccacatcgaggctagaacaaccacacaagcaagagagatgccaca--ctcttacccaaaaccttaaggcaat 3038368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 5916024 - 5915947
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  5916024 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 5915947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 20870575 - 20870630
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||||||||    
T  20870575 ggaccgtccatatcaaggttagaacaaccacacaagcaagagagacaccacactct 20870630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 34835024 - 34834956
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  34835024 cacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 34834956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 3669854 - 3669767
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| | |||||| | |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  3669854 gggagctagggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 3669767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 418
Target Start/End: Complemental strand, 45123163 - 45123089
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    |||||||| |||||| || ||| ||||||| |||||  ||||||||||||||||||||||||||||||| |||||    
T  45123163 gggaccgtccacatcgagattagaacaaccccacaaataagagagacaccacactctcttacccaaaaccttaag 45123089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 6651651 - 6651574
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| | |||||| |||||| ||||| | ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  6651651 gggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 6651574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 412
Target Start/End: Original strand, 6876841 - 6876929
Alignment:
Q  321 ctgggtcataggagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaac 412  Q
    ||||||||| || ||||||||| |||||||| |||||| ||| || ||||||||||||| ||||||| ||||||||  ||||||||||||||    
T  6876841 ctgggtcattgg-gggagctcgggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccaca--ctcttacccaaaac 6876929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 30441233 - 30441165
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  30441233 cacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 30441165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 424
Target Start/End: Complemental strand, 3670214 - 3670139
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| |||||| ||||    
T  3670214 accgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggaaata 3670139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 40579260 - 40579326
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||| ||||| || |||||| ||| || ||||||| ||||||||||||||||||||||||||    
T  40579260 gggagctcgggggacagtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactct 40579326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 424
Target Start/End: Original strand, 8918765 - 8918843
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||| |||||| ||||||||||||||||||| |||||| ||||  ||||  |||||||||||||| ||||| |||||    
T  8918765 gggaccgtccacatcgaggttaaaacaaccacacacgcaagaaagacgtcaca--ctcttacccaaaaccttaagtcaata 8918843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 34835366 - 34835289
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||  ||||| ||| || || ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||    
T  34835366 gggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccaca--ctcttacccaaaactttaaggcaat 34835289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 34835632 - 34835555
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||  ||||| ||| || || ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||    
T  34835632 gggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccaca--ctcttacccaaaactttaaggcaat 34835555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 34835898 - 34835821
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||  ||||| ||| || || ||||||||||||||||| |||||||||  |||||||||||||| ||||||||||    
T  34835898 gggaccgtctacatcgaggctagaataaccacacaagcaagagtgacaccaca--ctcttacccaaaactttaaggcaat 34835821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 41129145 - 41129068
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| |||||  |||||||||||||| |||||||||||||||  ||| |||||||||| ||||| ||||    
T  41129145 gggaccgtccacatcgaggtttgaacaaccacacaagtaagagagacaccaca--ctcatacccaaaaccttaagacaat 41129068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 6732043 - 6731975
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||||||| || |||||||||||||||||||  ||||||| |||||| ||||||||||    
T  6732043 cacatcgaggttagaacaaccgcataagcaagagagacaccaca--ctcttactcaaaaccttaaggcaat 6731975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 8919145 - 8919220
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| |||||| | | || ||||||||||||||||| ||||||||||||  |||||| ||||||| ||||||||    
T  8919145 gggaccgtccacatcgaagctagaacaaccacacaagcaaaagagacaccaca--ctcttatccaaaaccttaaggca 8919220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 33113391 - 33113445
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||  ||||||||||    
T  33113391 aacaaccacactagcaagagagacaccaca--ctcttacccaaaatcttaaggcaat 33113445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 424
Target Start/End: Complemental strand, 147599 - 147530
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||| | || ||| ||| |||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  147599 cacatcaatgctagaactaccgcacaagcaagagagacgccaca--ctcttacccaaaactttaaggcaata 147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 147976 - 147899
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||| ||||||  ||| || ||||||  |||||| |||||||||||||||  |||||||||||||| |||||||||||    
T  147976 ggaccgctcacattgaggctagaacaactgcacaagtaagagagacaccaca--ctcttacccaaaaccttaaggcaata 147899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 30359439 - 30359354
Alignment:
Q  334 gggagctcgaggga-ccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||||||||| || | |||||  ||| |||||||||  |||||| |||||||||||||||  |||||||||||||| |||||||    
T  30359439 gggagctcgagggaaccatccacattgaggctaaaacaacatcacaagaaagagagacaccaca--ctcttacccaaaaccttaaggc 30359354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 419
Target Start/End: Original strand, 1014255 - 1014319
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    |||||| ||| || ||||||| |||||||| |||||||||||||  |||||||||||||| ||||||    
T  1014255 cacatcgaggctagaacaaccgcacaagcaggagagacaccaca--ctcttacccaaaactttaagg 1014319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 32640534 - 32640610
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||||||| ||| || ||||| |||| ||||||||||||| | |||  |||||||||||||| ||||||||||    
T  32640534 ggaccgctcacatcgaggctagaacaatcacaaaagcaagagagacgcaaca--ctcttacccaaaaccttaaggcaat 32640610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 9309148 - 9309059
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacact-ctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||||| |||||| ||| || |||||||||| | |  |||||||||||||||| ||||| |||||||| || |||||||    
T  9309148 gggagctcgggggaccgtccacatcgaggctagaacaaccacata-gtgagagagacaccacactactcttgcccaaaacctttaggcaat 9309059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 9609219 - 9609168
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||| |||||||||||| |||||  |||||||| |||||||||||||    
T  9609219 aacaaccacactagcaagagagacgccaca--ctcttaccgaaaacattaaggc 9609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 418
Target Start/End: Original strand, 45122067 - 45122130
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    |||||| ||| || ||||||| |||||| |||||||||||||||  |||||||||||||| |||||    
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccaca--ctcttacccaaaaccttaag 45122130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 9482608 - 9482661
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||| |||||| ||| || ||||||| ||||||||||||||| ||||||||||    
T  9482608 accgtccacatcgaggctagaacaaccgcacaagcaagagagataccacactct 9482661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 9483191 - 9483265
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| |||||| ||| || ||||||| ||| ||||| ||||||||||||  |||||||||||||| ||||| ||||    
T  9483191 accgtccacatcgaggctagaacaaccgcacgagcaaaagagacaccaca--ctcttacccaaaaccttaagacaat 9483265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 399
Target Start/End: Original strand, 43274626 - 43274691
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactc 399  Q
    ||||||||| |||||||| |||||| ||| |  ||||||| || ||| ||||||||||||||||||    
T  43274626 gggagctcgggggaccgtccacatcgaggctggaacaaccccataagtaagagagacaccacactc 43274691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 45122758 - 45122704
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||||||||||||||||| |||||  ||| |||||||||| ||||| ||||    
T  45122758 aacaaccacacaagcaagagagacgccaca--ctcatacccaaaaccttaagacaat 45122704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 3037960 - 3038016
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagac 390  Q
    ||||||||| |||||||| |||||| ||| || ||||||||||||||  ||||||||    
T  3037960 gggagctcgggggaccgtccacatcgaggctagaacaaccacacaagatagagagac 3038016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 44290815 - 44290903
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||||| |||||| ||| || ||||||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  44290815 gggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagatacaccacactct-ttacccaaaaccttaaggcaat 44290903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 41759640 - 41759563
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||||||| || |||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||    
T  41759640 gggaccgtccacatcaaggctagaacaaccacataagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 41759563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 41142540 - 41142452
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||| |||| |||||||| |||||| ||| || |||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||    
T  41142540 gggaactcgggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccacactct-ttaccaaaaaccttaaggcaat 41142452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 26661922 - 26661976
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  26661922 aacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 26661976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 37555895 - 37555812
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||| |||||  |||||| ||| |  ||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  37555895 gggagctcgagcgaccgc-cacatcgaggcttgaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggc 37555812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 37556277 - 37556194
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||| |||||  |||||| ||| |  ||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  37556277 gggagctcgagcgaccgc-cacatcgaggcttgaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggc 37556194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 344 - 418
Target Start/End: Complemental strand, 45084533 - 45084461
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    |||||||| | |||| |||||| ||||||| ||||||||||||||||||  |||||||||||||||||| |||||    
T  45084533 gggaccgtccgcatcgaggttagaacaaccgcacaagcaagagagacac--cactctcttacccaaaaccttaag 45084461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 44290449 - 44290536
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||||| |||||| ||| || |||||||  |||||||||| |||||||| |||||  |||||||||| ||||||||||    
T  44290449 gggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactct--tacccaaaaccttaaggcaat 44290536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 26661546 - 26661600
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||    
T  26661546 aacaaccacacaagcgagagagacaccaca--ctcttacccaaaaccttaaggcaat 26661600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 3537600 - 3537677
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| ||||| ||||    
T  3537600 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaagccaat 3537677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 9956066 - 9955989
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| ||||||| ||| || | ||||| ||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  9956066 gggaccgctcacatcgaggctagagcaaccgcacaagcaagagagacatcaca--ctcttacccaaaaccttaaggcaat 9955989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 41157148 - 41157071
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||  |||||| ||| || ||||||||||||||||| ||||||||||||  |||||||||||||| |||| |||||    
T  41157148 gggaccgcccacatcgaggctagaacaaccacacaagcaatagagacaccaca--ctcttacccaaaaccttaaagcaat 41157071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 421
Target Start/End: Complemental strand, 11977110 - 11977026
Alignment:
Q  335 ggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| |||||||| |||||| ||| || ||| ||| |||  |||||||||||||||||  |||||||||||||| ||||||||    
T  11977110 ggagctcgggggaccgtccacatcgaggctagaactaccgcacttgcaagagagacaccaca--ctcttacccaaaaccttaaggca 11977026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 421
Target Start/End: Complemental strand, 34649595 - 34649520
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| |||||| ||| || ||||||||||| |||||||||||| || ||  |||||||||||||| ||||||||    
T  34649595 gggaccgtccacatcgaggctagaacaaccacactagcaagagagacgcctca--ctcttacccaaaaccttaaggca 34649520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 41157534 - 41157476
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||||  |||||| ||| || ||||||||||||||||||| ||||||||||||||    
T  41157534 gagggaccgcccacatcgaggctagaacaaccacacaagcaagacagacaccacactct 41157476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 45493954 - 45494052
Alignment:
Q  322 tgggtcataggagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| || ||||||| | |||||||| |||||| ||| |  |||||||||| ||| |||||||||||||||  |||||| ||||||| ||||||||    
T  45493954 tgggtcattggggggagctgg-gggaccgtccacatcgaggcttgaacaaccacataaggaagagagacaccaca--ctcttatccaaaactttaaggca 45494050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 48588491 - 48588566
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||| || ||||||| |||||| |||||||||||| ||  |||||||||||||| ||||||||||    
T  48588491 gaccgtccacatcgaggctagaacaaccgcacaagtaagagagacaccgca--ctcttacccaaaaccttaaggcaat 48588566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 424
Target Start/End: Complemental strand, 14319024 - 14318946
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||| |||||  ||| || ||||||| |||||  |||||||||||||||  |||||||||||||| |||||||||||    
T  14319024 gggaccgtccacattgaggctagaacaaccgcacaaataagagagacaccaca--ctcttacccaaaaccttaaggcaata 14318946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 334 - 418
Target Start/End: Original strand, 50052015 - 50052096
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    ||||||||| ||||| || |||||| |||||| |||||| ||| || ||||||||||||||||  |||||||||||||| |||||    
T  50052015 gggagctcgggggactgtccacatcgaggttagaacaac-acataaacaagagagacaccaca--ctcttacccaaaactttaag 50052096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 32168699 - 32168776
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| || |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| | ||||||||    
T  32168699 gggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaacctcaaggcaat 32168776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 400
Target Start/End: Original strand, 39066209 - 39066257
Alignment:
Q  352 tcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||||| || |||||||||| ||| |||||||||||||||||||    
T  39066209 tcacatcaaggctagaacaaccacataagtaagagagacaccacactct 39066257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 40082554 - 40082486
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||| | ||||||||||||||| ||||||  |||||||||||||| ||||||||||    
T  40082554 cacatcgaggctagaacaaacgcacaagcaagagagataccaca--ctcttacccaaaaccttaaggcaat 40082486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 5319989 - 5320040
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||||| ||||||||||||||| |||  |||||||||||||| |||||||    
T  5319989 aacaaccacataagcaagagagacactaca--ctcttacccaaaaccttaaggc 5320040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 421
Target Start/End: Complemental strand, 11977437 - 11977362
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| |||||| ||| || ||||||| |||  |||||||||||| ||||  |||||||||||||| ||||||||    
T  11977437 gggaccgtccacatcgaggctagaacaaccgcacttgcaagagagacatcaca--ctcttacccaaaaccttaaggca 11977362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 421
Target Start/End: Original strand, 31767162 - 31767237
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||| |||||| ||  || ||||||||||||||||||| ||||  ||||  |||||||||||||| ||||||||    
T  31767162 gggaccgtccacatcgagtctagaacaaccacacaagcaagatagacgtcaca--ctcttacccaaaaccttaaggca 31767237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 423
Target Start/End: Complemental strand, 3550842 - 3550800
Alignment:
Q  379 agcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||    
T  3550842 agcaagagagacaccaca--ctcttacccaaaactttaaggcaat 3550800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 419
Target Start/End: Original strand, 38804379 - 38804429
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||||| |||||||||||||||||| |||  |||||||||||||| ||||||    
T  38804379 aacaaccgcacaagcaagagagacactaca--ctcttacccaaaaccttaagg 38804429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 29798340 - 29798300
Alignment:
Q  360 aggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||| |||||||||||  |||||||||||||||||||||    
T  29798340 aggttagaacaaccacacttgcaagagagacaccacactct 29798300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 7e-19; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 334 - 421
Target Start/End: Original strand, 16889525 - 16889610
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||||||||||||||| |||||| |||||| ||||| |||||||| ||||||||||||| |  |||||||||||||| ||||||||    
T  16889525 gggagctcgagggaccgtccacatcgaggttagaacaatcacacaaggaagagagacaccata--ctcttacccaaaactttaaggca 16889610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 36629394 - 36629317
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  36629394 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 36629317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 44620510 - 44620433
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||  |||||||||||||| ||||||||||    
T  44620510 gggaccgtccacatcaaggttagaacaaccacacaagcaagagaaacatcaca--ctcttacccaaaaccttaaggcaat 44620433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 39792860 - 39792936
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||| ||| || ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  39792860 ggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 39792936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 25483491 - 25483416
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||| || ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  25483491 gaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 25483416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 1731638 - 1731723
Alignment:
Q  336 gagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| |||||||||| |||||  ||| || ||||||||||||||||||||| ||||||||  |||||||||||||| ||||||||||    
T  1731638 gagctggagggaccgtccacattgaggctagaacaaccacacaagcaagagaaacaccaca--ctcttacccaaaaccttaaggcaat 1731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 23817680 - 23817757
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||||||| ||||||||||||||||||  |||||||||||||| ||||||||||    
T  23817680 gggaccgtccacatcgaggctagaacaaccacactagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 23817757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 334 - 417
Target Start/End: Complemental strand, 39404185 - 39404104
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaa 417  Q
    ||||||||| |||||||| |||||| ||| || |||||||||||||||||||||||| |||||  |||||||||||||| ||||    
T  39404185 gggagctcgggggaccgtccacatcgaggctagaacaaccacacaagcaagagagacgccaca--ctcttacccaaaaccttaa 39404104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 50630763 - 50630831
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| |||||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  50630763 cacatcgaggctaaaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 50630831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 54343000 - 54343084
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| | |||||| ||| || ||||||||| ||||||||||||||||||||  |||||||||||||| ||||||||||    
T  54343000 agctcgggggaccatccacatcgaggctagaacaaccactcaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 54343084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 39404555 - 39404481
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||||||   |||| |||||||| |||||||    
T  39404555 gggaccgttcacatcgaggctagaacaaccacacaagcaagagagacaccaca--ttcttgcccaaaaccttaaggc 39404481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 22028368 - 22028445
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||  ||| || ||||||| ||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  22028368 gggaccgtccacattgaggctagaacaacctcacaagcaagagagacaccaca--ctcttacccaaaacattaagacaat 22028445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 41370514 - 41370437
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||||| |||||||||||||||| |||  |||||||||||||| ||||||||||    
T  41370514 gggaccgtccacatcgaggctagaacaaccactcaagcaagagagacactaca--ctcttacccaaaactttaaggcaat 41370437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 18932741 - 18932825
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||||| |||||| ||| || ||||||||| |||| |||||||||||||||  |||||||| ||||| ||||||||||    
T  18932741 agctcgggggaccgtacacatcgaggctataacaaccactcaagtaagagagacaccaca--ctcttacctaaaaccttaaggcaat 18932825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 34646645 - 34646725
Alignment:
Q  341 cgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||| |||| ||||| || ||||||||||||  | ||||||||||||||  |||||||||||||| ||||||||||    
T  34646645 cgagggaccgtccacaacaaggctagaacaaccacacagaccagagagacaccaca--ctcttacccaaaaccttaaggcaat 34646725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 43827603 - 43827540
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||| |||||||| |||||| |||||| ||||||| |||||| |||||||||||||||||||    
T  43827603 agctcgggggaccgtccacatcgaggttagaacaaccgcacaagtaagagagacaccacactct 43827540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 400
Target Start/End: Complemental strand, 43174308 - 43174242
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||| |||||||| |||||||||| |  ||||||||||||||  ||||||||||||||||||    
T  43174308 gggagctcgggggaccgtccacatcaaggcttgaacaaccacacaagtgagagagacaccacactct 43174242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 419
Target Start/End: Complemental strand, 44620826 - 44620743
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||||| | |||||||| |||||| ||| || ||||||| ||||||||||||||| ||||||  |||||||||||||| ||||||    
T  44620826 gggagcttgggggaccgtccacatcgaggatataacaaccgcacaagcaagagagaaaccaca--ctcttacccaaaaccttaagg 44620743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 50459880 - 50459822
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||||| |||||| ||| || ||||||||||||||||||||||||||||| ||||    
T  50459880 gagggaccgtgcacatcgaggctagaacaaccacacaagcaagagagacaccacgctct 50459822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 421
Target Start/End: Complemental strand, 3340962 - 3340889
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    |||||| |||||| ||| || ||||||| ||||||||||| ||||||||||  |||||||||||||| ||||||||    
T  3340962 gaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccaca--ctcttacccaaaaccttaaggca 3340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 10246086 - 10246002
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||| | |||| ||| |||||| ||| || |||||||| ||||||||| |||||||||||  |||||||||||||| |||||||    
T  10246086 gggagcttgggggagcgtccacatcgaggctagaacaaccagacaagcaagggagacaccaca--ctcttacccaaaaccttaaggc 10246002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 424
Target Start/End: Original strand, 22027958 - 22028038
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||| || |||||| ||  ||||||||||||| |||| ||||||||||||||   ||||||||||||| |||||||||||    
T  22027958 gagggactgtccacatcgagactaaaacaaccacataagcgagagagacaccaca--ttcttacccaaaaccttaaggcaata 22028038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 19504830 - 19504775
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||||||||||||||| |||| |||||  |||||||||||||| |||||||||||    
T  19504830 aacaaccacacaagcaagatagacgccaca--ctcttacccaaaactttaaggcaata 19504775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 36608650 - 36608737
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| | |||||||| |||||| ||| || ||||||||||| ||  ||||||||||||||  |||||||||||||| ||||| ||||    
T  36608650 gggagcttgggggaccgtccacatcgaggctagaacaaccacactagtgagagagacaccaca--ctcttacccaaaaccttaagacaat 36608737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 54017596 - 54017671
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||| || |||||||||| |||||||||||||| ||||  |||||||| ||||| ||||||||||    
T  54017596 gaccgtccacatcgaggctagaacaaccacataagcaagagagacatcaca--ctcttacctaaaaccttaaggcaat 54017671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 55933113 - 55933200
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| | |||||||| |||||| ||| || ||||||   ||||| |||||||||||||||  |||||||||||||| ||||||||||    
T  55933113 gggagcttgggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccaca--ctcttacccaaaactttaaggcaat 55933200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 54108671 - 54108617
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||||||| ||||||||||  |||||| ||||||| ||||||||||    
T  54108671 aacaaccacacaagcaagatagacaccaca--ctcttagccaaaaccttaaggcaat 54108617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 54109046 - 54108993
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  54109046 aacaaccgcacaagcaagagagacaccaca--ctcttacccaaaac-ttaaggcaat 54108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 36572176 - 36572099
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||| ||| |  ||||||| ||||||| |||||||||||| |  |||| ||||||||| ||||||||||    
T  36572176 gggaccgttcacatcgaggcttgaacaaccgcacaagcgagagagacaccata--ctctaacccaaaaccttaaggcaat 36572099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 44621159 - 44621082
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || || |||| ||||||||||||| ||||||||  |||||||||||||| ||||| ||||    
T  44621159 gggaccgtccacatcgaggctagaataaccgcacaagcaagagaaacaccaca--ctcttacccaaaaccttaagacaat 44621082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 45496934 - 45496885
Alignment:
Q  372 ccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||| ||||    
T  45496934 ccacacaagcaagagagacaccaca--ctcttacccaaaaccttaagacaat 45496885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 400
Target Start/End: Original strand, 49076818 - 49076886
Alignment:
Q  332 gagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||||  ||||| || |||||| ||| || ||||||| ||||||||||| ||||||||||||||    
T  49076818 gagggagctcaggggacagtccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactct 49076886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 50002583 - 50002506
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||  |||||| ||| || ||||||| |||||| |||||||||||||||  |||||||||||||| ||||| ||||    
T  50002583 gggaccgcccacatcgaggctagaacaaccgcacaagtaagagagacaccaca--ctcttacccaaaaccttaagacaat 50002506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 32941131 - 32941199
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||| ||||||||||||||||  ||||  |||||||||||||| ||||||||||    
T  32941131 cacatcgaggctagaacaaccgcacaagcaagagagacgtcaca--ctcttacccaaaaccttaaggcaat 32941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 52884828 - 52884775
Alignment:
Q  369 caaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| |||||||||||||||||||||||||| |  |||||||| ||||||||||    
T  52884828 caaccgcacaagcaagagagacaccacactct-taccccaaaaccttaaggcaat 52884775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 54936362 - 54936276
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| ||||| || |||||| ||| || |||||||||| | |  ||||||||||||||||||  |||||||||| ||||||||||    
T  54936362 gggagctcgggggactgtccacatcgaggctagaacaaccacata-gtgagagagacaccacactct--tacccaaaaccttaaggcaat 54936276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 20825993 - 20825919
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||| || |||||||||| || ||||||| || ||| |||||| ||||||||  |||||||||||||| |||||||    
T  20825993 gggactgtccacatcaaggctagaacaaccgcataaggaagagaaacaccaca--ctcttacccaaaaccttaaggc 20825919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 31691321 - 31691232
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||| ||| ||| |||||| ||| || ||||| |  |||||||||||| | ||  ||| |||||||||||||| ||||||||||    
T  31691321 gggagctcgaaggatcgtccacatcgaggctagaacaatcgtacaagcaagagatagacgccacactcttacccaaaaccttaaggcaat 31691232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 6133491 - 6133439
Alignment:
Q  29 tgtggggagaagcaattgttgg-tagcaatatataaatatatagtactatgat 80  Q
    ||||||||||||| |||||||| ||||||||||||| |||||| | |||||||    
T  6133491 tgtggggagaagctattgttggttagcaatatataattatatatttctatgat 6133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 7e-19; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 37990632 - 37990717
Alignment:
Q  336 gagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||||| |||||| ||| || ||||| ||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  37990632 gagctcgggggaccgtccacatcgaggctagaacaatcacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 37990717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 400
Target Start/End: Complemental strand, 15773010 - 15772955
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  15773010 ggaccgtccacatcgaggttagaacaaccacacaagcaagagagacaccacactct 15772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 342 - 420
Target Start/End: Original strand, 37990976 - 37991052
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||||| |||||| ||| || |||||||||| |||||||||||||||||||  |||||||||||||| |||||||    
T  37990976 gagggaccgtccacatcgaggctagaacaaccacataagcaagagagacaccaca--ctcttacccaaaaccttaaggc 37991052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 424
Target Start/End: Original strand, 43978855 - 43978948
Alignment:
Q  333 agggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct--cttacccaaaacattaaggcaata 424  Q
    |||||||||| ||||| || |||||| |||||| ||||| ||||||||  |||||||| |||||||||  |||||||||||| |||||||||||    
T  43978855 agggagctcgggggacagtccacatcgaggttagaacaaacacacaagtgagagagacgccacactctagcttacccaaaaccttaaggcaata 43978948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 42342079 - 42342168
Alignment:
Q  332 gagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||  ||||||| |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  42342079 gagggagttcggaggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaaggcaat 42342168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 8328437 - 8328374
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacac 397  Q
    ||||| ||| |||||||| |||||| ||| |||||||||| |||||||||||||||||||||||    
T  8328437 gggagttcgtgggaccgtccacatcgaggctaaaacaaccccacaagcaagagagacaccacac 8328374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 43346793 - 43346869
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||  ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  43346793 ggaccgtccacatagaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 43346869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 29644893 - 29644980
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| | |||||||| |||||| ||| |||||||||| || ||||||||||||| |||||  |||||||||||||| ||||| ||||    
T  29644893 gggagcttgggggaccgtccacatcgaggctaaaacaaccgcataagcaagagagacgccaca--ctcttacccaaaaccttaagacaat 29644980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 32462903 - 32462978
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||| || ||||||| ||||||||||||||||||||||  ||||||| |||||| ||||||||||    
T  32462903 gaccgtacacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttactcaaaaccttaaggcaat 32462978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 22304703 - 22304649
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  22304703 aacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 22304649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 54018199 - 54018273
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||  |||||| ||| || |||||||||||||||| |||||||||||||  |||||||||||||| |||||||    
T  54018199 gggaccgcccacatcgaggctagaacaaccacacaagcatgagagacaccaca--ctcttacccaaaaccttaaggc 54018273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 32589860 - 32589783
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||  || ||||||||||||||||||||||||| | ||  |||||||||||||| ||||||||||    
T  32589860 gggaccgtccacatcgagcctagaacaaccacacaagcaagagagacatcgca--ctcttacccaaaaccttaaggcaat 32589783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 22303965 - 22304033
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||||| ||||||||||||||||||||  |||||| ||||||| ||||||||||    
T  22303965 cacatcgaggctagaacaaccactcaagcaagagagacaccaca--ctcttatccaaaaccttaaggcaat 22304033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 39934965 - 39935033
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||||||||||||||||||||| ||||  ||||||| |||||| ||||||||||    
T  39934965 cacatcgaggctagaacaaccacacaagcaagagagacatcaca--ctcttactcaaaactttaaggcaat 39935033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 15773342 - 15773272
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||||||||||||||||||  ||| ||  ||| |||||||||||||| ||||||||||    
T  15773342 cacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaat 15773272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 52634842 - 52634755
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| ||||| ||  ||||||||| || ||||||  ||||||||||||||||  ||||  |||||||||||||| ||||||||||    
T  52634842 gggagctcgggggacagtctacatcaaggctagaacaactgcacaagcaagagagacgtcaca--ctcttacccaaaaccttaaggcaat 52634755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 367 - 420
Target Start/End: Original strand, 54017840 - 54017891
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||||||||| |||||||||||||||  |||||||||||||| |||||||    
T  54017840 aacaaccacacaagtaagagagacaccaca--ctcttacccaaaaccttaaggc 54017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 3135455 - 3135511
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||| |||||| ||| || ||||||| ||||||||| ||||||||||||||||    
T  3135455 gggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactct 3135511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 41359766 - 41359843
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||  |||||| ||| || ||||||||||||||| |||||||| |||||   ||||||||||||| ||||||||||    
T  41359766 gggaccgcccacatcgaggctagaacaaccacacaagcgagagagacgccaca--ttcttacccaaaaccttaaggcaat 41359843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 422
Target Start/End: Complemental strand, 35946679 - 35946603
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaa 422  Q
    |||||||| |||||| ||| || |||||   ||||||||||||||||||||||  || ||||||||||| |||||||||    
T  35946679 gggaccgtccacatcgaggctagaacaattgcacaagcaagagagacaccaca--cttttacccaaaaccttaaggcaa 35946603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 39336000 - 39336048
Alignment:
Q  373 cacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| ||||||||||||||  |||||||||||||| ||||||||||    
T  39336000 cacacaagcgagagagacaccaca--ctcttacccaaaaccttaaggcaat 39336048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 31190143 - 31190092
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||  |||||||||||||||||||||  |||||||||||||| |||||||    
T  31190143 aacaacccgacaagcaagagagacaccaca--ctcttacccaaaaccttaaggc 31190092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Complemental strand, 53577498 - 53577443
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||||||  |||||||||||||||||  ||||||||||| || |||||||||||    
T  53577498 aacaaccacacttgcaagagagacaccaca--ctcttacccaagaccttaaggcaata 53577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 423
Target Start/End: Original strand, 54017527 - 54017626
Alignment:
Q  322 tgggtcataggagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||||||  ||||| | | |||||||  |||||| |||  ||||||| |||| ||| || ||||||||||||  |||||||||||||| ||||||||    
T  54017527 tgggtcatagaggggagttagggggaccgaccacatcgaggccaaaacaatcacataagtaatagagacaccaca--ctcttacccaaaaccttaaggca 54017624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 423
Target Start/End: Original strand, 12114586 - 12114640
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| |||||| |||||||||||||||  |||||||||||||| ||||| ||||    
T  12114586 aacaaccgcacaagtaagagagacaccaca--ctcttacccaaaaccttaagacaat 12114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 392
Target Start/End: Complemental strand, 22304350 - 22304302
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacac 392  Q
    |||||||| |||||| ||| || ||||||| ||||||||||||||||||    
T  22304350 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacac 22304302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 398
Target Start/End: Complemental strand, 25755561 - 25755497
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacact 398  Q
    ||||| ||| |||||| | |||||| ||| || ||||||| |||||||||||||||| |||||||    
T  25755561 gggagttcgggggaccatccacatcgaggctagaacaaccgcacaagcaagagagacgccacact 25755497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 29644602 - 29644659
Alignment:
Q  364 taaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||| || ||||||||||||| |||||  |||||||||||||| ||||| ||||    
T  29644602 taaaacaaccgcataagcaagagagacgccaca--ctcttacccaaaaccttaagacaat 29644659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 419
Target Start/End: Original strand, 41359492 - 41359565
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    |||||||| |||||  ||| || ||||||| ||||||||| |||||| |||||||||  |||||||||| ||||||    
T  41359492 gggaccgtccacattgaggctagaacaaccgcacaagcaaaagagacgccacactct--tacccaaaaccttaagg 41359565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 42342389 - 42342466
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||  ||| || ||||||| ||||||||||||||||  ||||  |||||||||||||| ||||| ||||    
T  42342389 gggaccgtccacattgaggctagaacaaccgcacaagcaagagagacgtcaca--ctcttacccaaaaccttaagacaat 42342466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 424
Target Start/End: Original strand, 47964544 - 47964597
Alignment:
Q  369 caaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||||||||  |||||||| |||||||||  |||||||||| |||||||||||    
T  47964544 caaccacacaagtgagagagacgccacactct--tacccaaaaccttaaggcaata 47964597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 418
Target Start/End: Original strand, 50612471 - 50612520
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaag 418  Q
    ||||||||| ||||||||||||||| ||||  |||||||||||||| |||||    
T  50612471 aacaaccactcaagcaagagagacatcaca--ctcttacccaaaaccttaag 50612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 16455074 - 16454986
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||||| |||||||| |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| |||||||||||    
T  16455074 gggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaaggcaata 16454986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 29518669 - 29518587
Alignment:
Q  335 ggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||| || |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||    
T  29518669 ggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaagg 29518587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 29519086 - 29519004
Alignment:
Q  335 ggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||| || |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||    
T  29519086 ggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaagg 29519004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 419
Target Start/End: Complemental strand, 32741345 - 32741263
Alignment:
Q  335 ggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||| || |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||    
T  32741345 ggagcgcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaagg 32741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 419
Target Start/End: Original strand, 2578836 - 2578909
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    |||||||| |||||| |||| | ||||||||||||||||| ||||||||||||  |||||||||||||| ||||||    
T  2578836 gggaccgtccacatcgaggtcagaacaaccacacaagcaaaagagacaccaca--ctcttacccaaaaccttaagg 2578909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 2843712 - 2843635
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||||| ||||||||||||| ||||||  |||||||||||||| ||||||||||    
T  2843712 gggaccgtccacatcgaggctagaacaaccactcaagcaagagagataccaca--ctcttacccaaaaccttaaggcaat 2843635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 3409817 - 3409740
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  ||||||||||||| || ||||||||    
T  3409817 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaaataaaggcaat 3409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 16108219 - 16108155
Alignment:
Q  334 gggagctcg-agggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacac 397  Q
    ||||||||| ||||||||| |||||| |||||| ||||||| |||||||||||||||||||||||    
T  16108219 gggagctcggagggaccgtccacatcgaggttataacaaccccacaagcaagagagacaccacac 16108155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 1846912 - 1846828
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||||| |||||| ||| || ||||||| ||||||||| ||||||||||||  |||||| ||||||| ||||||||||    
T  1846912 agctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccaca--ctcttatccaaaaccttaaggcaat 1846828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 2579502 - 2579570
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| |||||||||||||||||||||||||||| |  || ||||||||||| ||||||||||    
T  2579502 cacatcgaggttagaacaaccacacaagcaagagagacaccata--cttttacccaaaaccttaaggcaat 2579570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 3409407 - 3409339
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 3409339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 2579101 - 2579166
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||| |||||||| |||||| ||| || ||||||||||| ||||||||||||||||||||||    
T  2579101 gggagctcg-gggaccgtgcacatcgaggctagaacaaccacacgagcaagagagacaccacactct 2579166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 400
Target Start/End: Complemental strand, 16454742 - 16454676
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||| |||||||| |||||| ||| || ||||||| |||||||||||||||| |||||||||    
T  16454742 gggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactct 16454676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 2578444 - 2578518
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||| |||||| ||| || ||||||| ||||||||| ||||||||||||  |||||||||||||| |||||||    
T  2578444 gggaccgtccacatcgaggctagaacaaccgcacaagcaaaagagacaccaca--ctcttacccaaaaccttaaggc 2578518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 3058383 - 3058306
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| || |||||| |||||| ||| |||  |||||||||||||||||||||  |||||||||||||| ||||||||||    
T  3058383 gggacggtccacatcgaggttagaaccaccctacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 3058306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 419
Target Start/End: Original strand, 12071692 - 12071765
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||||||||||||| ||| || ||||||||||||||  |||||||| |||||  |||||||||||||| ||||||    
T  12071692 gggaccgttcacatcgaggctagaacaaccacacaagtgagagagacgccaca--ctcttacccaaaaccttaagg 12071765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 423
Target Start/End: Complemental strand, 2377918 - 2377834
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| | |||||| ||| || || |||||| ||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  2377918 agctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccaca--ctcttacccaaaaccttaaggcaat 2377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 396
Target Start/End: Complemental strand, 2378290 - 2378231
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccaca 396  Q
    |||||| |||||||| |||||| ||| || ||||||||| ||||||||||||||||||||    
T  2378290 agctcgggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccaca 2378231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 423
Target Start/End: Complemental strand, 16107810 - 16107758
Alignment:
Q  369 caaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  16107810 caaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 16107758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 420
Target Start/End: Original strand, 2579873 - 2579947
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||| | |||||| ||| || ||||||| ||||||||||||||||||||||   ||||||||||||| |||||||    
T  2579873 gggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ttcttacccaaaaccttaaggc 2579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 3415592 - 3415538
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| ||||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  3415592 aacaaccgcacaagcaagagagacaccaca--ctcttaccaaaaaccttaaggcaat 3415538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 35210361 - 35210284
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || | ||||| ||||||||| ||| ||||||||  |||||||||||||| ||||||||||    
T  35210361 gggaccgtccacatcgaggctagagcaaccgcacaagcaaaagaaacaccaca--ctcttacccaaaaccttaaggcaat 35210284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 10074373 - 10074441
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| || ||||||||||| ||  ||||||||||||||  |||||||||||||| ||||||||||    
T  10074373 cacatcgaggctagaacaaccacactagtgagagagacaccaca--ctcttacccaaaaccttaaggcaat 10074441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 420
Target Start/End: Original strand, 12085037 - 12085109
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    |||||||| |||| ||| || ||||||||||||||  |||||||| |||||  |||||||||||||| |||||||    
T  12085037 gaccgttcgcatcgaggctagaacaaccacacaagtgagagagacgccaca--ctcttacccaaaaccttaaggc 12085109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Original strand, 5832028 - 5832082
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacact 398  Q
    ||||||||  ||||| ||| || |||||||||||||| |||||||||||||||||    
T  5832028 gggaccgtctacatcgaggctagaacaaccacacaagtaagagagacaccacact 5832082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 387
Target Start/End: Original strand, 14748333 - 14748386
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagaga 387  Q
    |||||| || |||||||| |||||| ||| || |||||||||||||||||||||    
T  14748333 gggagcgcgggggaccgtccacatcgaggctagaacaaccacacaagcaagaga 14748386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 10073992 - 10074069
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| ||| || ||| || |||||||| | |||| ||||||||||||||  || ||||||||||| ||||||||||    
T  10073992 gggaccgtccacgtcgaggctagaacaaccaaataagcgagagagacaccaca--cttttacccaaaaccttaaggcaat 10074069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 6500607 - 6500530
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  6500607 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 6500530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 15370266 - 15370182
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||| |||||||| |||||| ||| || ||||| | ||||||||||||||||||||||  |||||||||||||| |||||||    
T  15370266 gggagctcgggggaccgtccacatcgaggctagaacaatcccacaagcaagagagacaccaca--ctcttacccaaaaccttaaggc 15370182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 341 - 400
Target Start/End: Original strand, 36492215 - 36492274
Alignment:
Q  341 cgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  36492215 cgagggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaccacactct 36492274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 421
Target Start/End: Complemental strand, 25328102 - 25328017
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||||| |||||||| |||||  ||| || |||||||||||  |||||||||||||||||  |||||||||||||| ||||||||    
T  25328102 gggagctcgggggaccgtccacattgaggctagaacaaccacacttgcaagagagacaccaca--ctcttacccaaaaccttaaggca 25328017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 417
Target Start/End: Original strand, 26900008 - 26900089
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaa 417  Q
    ||||||| | |||||||| |||||||||| || ||||| | ||||||||||||||||||||||  |||||||||||||| ||||    
T  26900008 gggagcttgggggaccgtccacatcaaggctagaacaaacccacaagcaagagagacaccaca--ctcttacccaaaaccttaa 26900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 27502027 - 27502091
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacact 398  Q
    ||||||| | |||||||| |||||| ||| || ||||||||||||||||||||||||||||||||    
T  27502027 gggagctagggggaccgtccacatcgaggatagaacaaccacacaagcaagagagacaccacact 27502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 40296316 - 40296393
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||    
T  40296316 gggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaacctcaaggcaat 40296393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 34753029 - 34753103
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| |||||| ||| || ||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  34753029 accgtccacatcgaggctagaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaaggcaat 34753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 421
Target Start/End: Original strand, 42405589 - 42405672
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||||| |||||||| |||||| ||| || ||||||| ||||||||  ||||||||||||  |||||||||||||| ||||||||    
T  42405589 gggagctcgggggaccgtccacatcgaggctagaacaaccgcacaagca--agagacaccaca--ctcttacccaaaaccttaaggca 42405672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 3295346 - 3295402
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||| |||||| ||| || ||||||||||||||||||||||||| ||||||||    
T  3295346 gggaccgtccacatcgaggctagaacaaccacacaagcaagagagacaacacactct 3295402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 41632939 - 41632883
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||| |||||| ||  |||||||||| ||||||||||||||||||||||||||    
T  41632939 gggaccgtccacatcgagactaaaacaaccgcacaagcaagagagacaccacactct 41632883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 400
Target Start/End: Complemental strand, 38427387 - 38427320
Alignment:
Q  333 agggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||||| |||||||   ||||| |||||| ||||||| |||||||||||||||| |||||||||    
T  38427387 agggagctcgggggaccgccaacatcgaggttagaacaaccgcacaagcaagagagacgccacactct 38427320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 26075171 - 26075240
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| ||| ||||||||||||||  |||||||||||  |||||||| ||||||||||| ||||||||||    
T  26075171 cacatcgaggctaaaacaaccacacttgcaagagagacgacacactct-ttacccaaaaccttaaggcaat 26075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 18603124 - 18603198
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| |||||| ||| || ||| |||||||||||||||||||  |||||  |||||||||||||| ||||||||||    
T  18603124 accgtccacatcgaggctagaactaccacacaagcaagagagatgccaca--ctcttacccaaaaccttaaggcaat 18603198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 41170768 - 41170714
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||||||||||| | ||||||||  |||||||||||||| ||||||||||    
T  41170768 aacaaccacacaagcaagaaaaacaccaca--ctcttacccaaaaccttaaggcaat 41170714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 3295016 - 3295093
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||| || |||||| ||| || ||||||||||||| ||||||||||||||||  ||| |||||||||| | ||||||||    
T  3295016 gggactgtccacatcgaggctacaacaaccacacaaccaagagagacaccaca--ctcatacccaaaacctcaaggcaat 3295093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 6500979 - 6500902
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || || |||| |||||| |||||||||||||||  |||||| ||||||| ||||||||||    
T  6500979 gggaccgtccacatcgaggctagaataaccgcacaagtaagagagacaccaca--ctcttatccaaaaccttaaggcaat 6500902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 399
Target Start/End: Complemental strand, 24489635 - 24489583
Alignment:
Q  347 accgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactc 399  Q
    |||||||| ||| |||||| ||||||  |||||||||||||||||||||||||    
T  24489635 accgttcatatcgaggttagaacaactgcacaagcaagagagacaccacactc 24489583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 340 - 400
Target Start/End: Complemental strand, 33747932 - 33747872
Alignment:
Q  340 tcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||| ||||| |||||||||| || ||||||| || ||| |||||||||||||||||||    
T  33747932 tcgaggaaccgtccacatcaaggctagaacaaccgcataaggaagagagacaccacactct 33747872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 412
Target Start/End: Complemental strand, 624363 - 624287
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaac 412  Q
    ||||||||| || ||||| |||||| ||| || ||||||| ||||||  ||||||||||||||  ||||||||||||||    
T  624363 gggagctcggggaaccgtccacatcgaggctagaacaaccccacaagtgagagagacaccaca--ctcttacccaaaac 624287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Original strand, 26074156 - 26074224
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| | ||||||||| ||  ||||||||||||||  |||||||||||||| ||||||||||    
T  26074156 cacatcgaggttagagcaaccacactagtgagagagacaccaca--ctcttacccaaaaccttaaggcaat 26074224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 423
Target Start/End: Complemental strand, 26074760 - 26074692
Alignment:
Q  353 cacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| | ||||||||| ||  ||||||||||||||  |||||||||||||| ||||||||||    
T  26074760 cacatcgaggttagagcaaccacactagtgagagagacaccaca--ctcttacccaaaaccttaaggcaat 26074692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 36568560 - 36568645
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||| | |||||| ||| || ||||||||||||||  |||||||| |||||  |||||||| ||||| ||||||||||    
T  36568560 gggagctcgggggaccttccacatcgaggatagaacaaccacacaag--agagagacgccaca--ctcttaccaaaaaccttaaggcaat 36568645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 424
Target Start/End: Original strand, 13415784 - 13415839
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||| |||||||||||||||| |||||  |||||||||||||| |||||| ||||    
T  13415784 aacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaaggtaata 13415839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 301085 - 301052
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactct 400  Q
    |||| |||||||||||||||||||||||||||||    
T  301085 aacagccacacaagcaagagagacaccacactct 301052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 400
Target Start/End: Original strand, 795149 - 795186
Alignment:
Q  364 taaaacaaccacacaa-gcaagagagacaccacactct 400  Q
    |||||||||||||||| |||||||||||||||||||||    
T  795149 taaaacaaccacacaaagcaagagagacaccacactct 795186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Original strand, 795256 - 795289
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||| ||||||||||||||||||||||||||    
T  795256 aacaaccgcacaagcaagagagacaccacactct 795289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 32487550 - 32487473
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| | |||||| ||| || |||||||||| |||||||||| ||  ||||||||  |||||||||| ||||||||||    
T  32487550 gggaccatccacatcgaggctagaacaaccacataagcaagagatacgtcacactct--tacccaaaaccttaaggcaat 32487473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 423
Target Start/End: Original strand, 36178594 - 36178683
Alignment:
Q  332 gagggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| || |||| ||| |||||  ||| || ||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||    
T  36178594 gagggagcgcgggggatcgtccacatagaggctagaacaaccacacaagcaagagagacaccaca--ctcttacccaaaaccttaaggcaat 36178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 424
Target Start/End: Complemental strand, 6421898 - 6421810
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||||| |||||||| |||||| |||  | ||||||||||||||  ||||||||||||||  |||||||||||||| |||||||||||    
T  6421898 gggagctcgggggaccgtccacatcgaggccagaacaaccacacaagttagagagacaccaca--ctcttacccaaaaccttaaggcaata 6421810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 6421552 - 6421465
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||||| |||||| ||  || ||||||| ||||||||||||||||||||||  |||||||||||||| | ||||||||    
T  6421552 gggagctcgggggaccgtccacatcgagactagaacaaccgcacaagcaagagagacaccaca--ctcttacccaaaacctcaaggcaat 6421465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 334 - 423
Target Start/End: Complemental strand, 37106091 - 37106004
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||||||| |||||| ||| || |||||||  |||||||||||||||||||||  |||||||||||||  ||||||||||    
T  37106091 gggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagagagacaccaca--ctcttacccaaaatcttaaggcaat 37106004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 15880429 - 15880343
Alignment:
Q  335 ggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||  ||| ||| |||||| ||| |||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  15880429 ggagctcggaggaacgtccacatcgaggctaaaacaaccgcacaagcaagagagacgccaca--ctcttacccaaaaccttaaggcaat 15880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 41283476 - 41283553
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||||||| || ||||||||||||| |||||||||| |||||  |||||||| ||||| ||||||||||    
T  41283476 gggaccgtccacatcaaggctagaacaaccacacaaacaagagagacgccaca--ctcttacctaaaaccttaaggcaat 41283553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 424
Target Start/End: Original strand, 5542616 - 5542704
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    ||||||||| |||||||| |||||| ||  |  ||||||| ||||||||||||||||||||||  |||||||| ||||| |||||||||||    
T  5542616 gggagctcgggggaccgtccacatcgagacttgaacaaccgcacaagcaagagagacaccaca--ctcttaccaaaaaccttaaggcaata 5542704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 14745658 - 14745745
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| ||||| || |||||| ||| || |||||||||||  ||||||||||| |||||  |||||||||||||| ||||||||||    
T  14745658 gggagctcgggggactgtccacatcgaggctagaacaaccacacttgcaagagagacgccaca--ctcttacccaaaaccttaaggcaat 14745745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 36005871 - 36005958
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||||| ||| || |||||| ||| || ||||||| |||||||||||||||| |||||  || ||||||||||| ||||||||||    
T  36005871 gggagctcgagagactgtccacatcgaggctagaacaaccccacaagcaagagagacgccaca--cttttacccaaaaccttaaggcaat 36005958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 36178162 - 36178249
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| || ||||||||  ||||| ||| || |||||||||||||||||||||| |||||||  |||||||||||||  ||||||||||    
T  36178162 gggagcgcgggggaccgtctacatcgaggctataacaaccacacaagcaagagaggcaccaca--ctcttacccaaaatcttaaggcaat 36178249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 344 - 420
Target Start/End: Complemental strand, 6422267 - 6422193
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||| || |||||| ||| || ||||||||||||||||||||||||||||||  |||||||| ||||| |||||||    
T  6422267 gggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccaca--ctcttacctaaaaccttaaggc 6422193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 424
Target Start/End: Complemental strand, 33731804 - 33731727
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||| ||||| ||| || ||||||| || ||||||||||||||||| |  |||||||||||||| |||||||||||    
T  33731804 ggaccgtttacatcgaggctagaacaaccgcataagcaagagagacaccata--ctcttacccaaaaccttaaggcaata 33731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 398
Target Start/End: Original strand, 40163383 - 40163427
Alignment:
Q  354 acatcaaggttaaaacaaccacacaagcaagagagacaccacact 398  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  40163383 acatcgaggttagaacaaccacacaagcaagagagacaccacact 40163427  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 1770044 - 1769993
Alignment:
Q  349 cgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||||| ||| || ||||||| ||||||||||||||||||||||||||    
T  1770044 cgttcacatcgaggctagaacaacctcacaagcaagagagacaccacactct 1769993  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 424
Target Start/End: Original strand, 5542989 - 5543077
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaata 424  Q
    |||||||| ||| ||||| |||||| ||| |  ||||||| ||||||||| ||||||||||||  |||||||||||||  |||||||||||    
T  5542989 gggagctcaaggtaccgtccacatcgaggcttgaacaaccgcacaagcaatagagacaccaca--ctcttacccaaaatcttaaggcaata 5543077  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 420
Target Start/End: Complemental strand, 23346403 - 23346319
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||| | |||||| |||||| ||| || ||||||| ||||||||||||||||| ||||  |||||||| ||||| |||||||    
T  23346403 gggagctcgggcgaccgtccacatctaggctagaacaaccgcacaagcaagagagacatcaca--ctcttaccgaaaaccttaaggc 23346319  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 421
Target Start/End: Original strand, 38796617 - 38796696
Alignment:
Q  342 gagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggca 421  Q
    ||||||||||  ||||| ||| |  ||||||||||||||||| |||||| |||||  |||||||||||||| ||||||||    
T  38796617 gagggaccgtcgacatcgaggcttgaacaaccacacaagcaatagagacgccacatactcttacccaaaaccttaaggca 38796696  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 423
Target Start/End: Complemental strand, 962753 - 962678
Alignment:
Q  346 gaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| ||| || |||||||||||||||||||| ||||  |||| |||||||||||||| ||||| ||||    
T  962753 gaccgtccacatcgaggctagaacaaccacacaagcaagagtgaca--acacactcttacccaaaaccttaagacaat 962678  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 400
Target Start/End: Original strand, 15511487 - 15511552
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||||| |||| ||| |||||| ||  || ||||||||||||||||||||||||||||||||||    
T  15511487 gggagctcg-gggatcgtccacatcgagactagaacaaccacacaagcaagagagacaccacactct 15511552  T

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Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 35580429 - 35580518
Alignment:
Q  334 gggagctcgaggga-ccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||||| |||| |||| |||||| ||| |||||||| |||| | | | ||||||| ||||||||||||||||||||| ||||||||||    
T  35580429 gggagctcgggggaaccgtccacatcgaggctaaaacaatcacataggga-gagagacgccacactctcttacccaaaaccttaaggcaat 35580518  T

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Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 344 - 412
Target Start/End: Original strand, 31899103 - 31899169
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaac 412  Q
    ||||||||||||||| |||||| || |||| ||||||||||||||| ||| ||  ||||||||||||||    
T  31899103 gggaccgttcacatcgaggttagaagaaccccacaagcaagagagatacctca--ctcttacccaaaac 31899169  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 29676686 - 29676630
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||| |||||| |||||  || |||| ||||||||||||||||||||||||||    
T  29676686 gggaccgtccacatcgaggtttgaataaccccacaagcaagagagacaccacactct 29676630  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 423
Target Start/End: Original strand, 35580725 - 35580802
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| ||| || ||||||| ||||| |||||||||| || ||||||  |||||||||| ||||||||||    
T  35580725 gggaccgtccacatcgaggctagaacaaccccacaaacaagagagacgccgcactct--tacccaaaaccttaaggcaat 35580802  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 419
Target Start/End: Complemental strand, 37106344 - 37106272
Alignment:
Q  345 ggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||||| |||||| ||| || ||||| | ||||||||||||| ||||||||  |||||||||||||| ||||||    
T  37106344 ggaccgtccacatcgaggctagaacaatcgcacaagcaagagaaacaccaca--ctcttacccaaaaccttaagg 37106272  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 420
Target Start/End: Complemental strand, 40734016 - 40733965
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggc 420  Q
    ||||||||||||||| ||| ||||||||||  |||||||||||||| |||||||    
T  40734016 aacaaccacacaagcgagacagacaccaca--ctcttacccaaaactttaaggc 40733965  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 423
Target Start/End: Complemental strand, 3672835 - 3672781
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||||||||  |||||||||||||||  |||||||||||||  ||||||||||    
T  3672835 aacaaccacacaattaagagagacaccaca--ctcttacccaaaatcttaaggcaat 3672781  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 40733647 - 40733601
Alignment:
Q  371 accacacaagcaagagagacaccacactctcttacccaaaacattaagg 419  Q
    ||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  40733647 accacacaagcgagagagacaccaca--ctcttacccaaaactttaagg 40733601  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 3673225 - 3673169
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactct 400  Q
    |||||||| |||||| ||| || ||||||||||| || |||||||||| ||||||||    
T  3673225 gggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactct 3673169  T

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Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 423
Target Start/End: Complemental strand, 47517 - 47440
Alignment:
Q  344 gggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||||| |||||| |||||| ||||||| | ||||||||||||||||||||   | ||||||||||| ||||||||||    
T  47517 gggaccgtccacatcgaggttagaacaaccgcgcaagcaagagagacaccaca--tttttacccaaaactttaaggcaat 47440  T

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Target: scaffold0702 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 396
Target Start/End: Original strand, 141 - 200
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccaca 396  Q
    |||||| |||||||| |||||| ||| || ||||||||| ||||||||||||||||||||    
T  141 agctcgggggaccgtccacatcgaggctagaacaaccactcaagcaagagagacaccaca 200  T

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Target: scaffold0702; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 423
Target Start/End: Original strand, 508 - 592
Alignment:
Q  337 agctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    |||||| |||||| | |||||| ||| || || |||||| ||||||||| ||||||||||  |||||||||||||| ||||||||||    
T  508 agctcgggggaccttccacatcgaggctagaaaaaccactcaagcaagaaagacaccaca--ctcttacccaaaaccttaaggcaat 592  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 1097 - 1184
Alignment:
Q  334 gggagctcgagggaccgttcacatcaaggttaaaacaaccacacaagcaagagagacaccacactctcttacccaaaacattaaggcaat 423  Q
    ||||||| | || ||||| |||||| ||| || |||||||||| || |||||||||||||| |  |||||||||||||| ||||||||||    
T  1097 gggagcttggggaaccgtccacatcgaggctagaacaaccacataaacaagagagacaccata--ctcttacccaaaaccttaaggcaat 1184  T

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Target: scaffold0734 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 400
Target Start/End: Complemental strand, 5531 - 5498
Alignment:
Q  367 aacaaccacacaagcaagagagacaccacactct 400  Q
    ||||||| ||||||||||||||||||||||||||    
T  5531 aacaaccccacaagcaagagagacaccacactct 5498  T

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