View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1245_low_3 (Length: 615)

Name: NF1245_low_3
Description: NF1245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1245_low_3
NF1245_low_3
[»] chr4 (84 HSPs)
chr4 (348-596)||(51922791-51923043)
chr4 (425-596)||(26651831-26652005)
chr4 (410-596)||(16566219-16566408)
chr4 (394-595)||(43772107-43772311)
chr4 (360-595)||(13183034-13183272)
chr4 (401-596)||(42944881-42945079)
chr4 (403-596)||(19592214-19592410)
chr4 (400-596)||(39636689-39636888)
chr4 (423-582)||(48550424-48550586)
chr4 (394-596)||(49519628-49519833)
chr4 (434-596)||(29149290-29149455)
chr4 (426-596)||(43781502-43781674)
chr4 (405-596)||(48407681-48407874)
chr4 (414-596)||(46830052-46830237)
chr4 (395-580)||(4954050-4954238)
chr4 (423-596)||(14072430-14072605)
chr4 (426-595)||(54152975-54153146)
chr4 (410-596)||(14564129-14564318)
chr4 (405-596)||(30842041-30842234)
chr4 (396-595)||(49136422-49136624)
chr4 (479-596)||(39187720-39187837)
chr4 (410-596)||(6138603-6138791)
chr4 (426-595)||(32238043-32238214)
chr4 (441-596)||(25312660-25312818)
chr4 (421-596)||(26426098-26426275)
chr4 (441-595)||(13167470-13167627)
chr4 (414-595)||(28986939-28987120)
chr4 (400-596)||(15603264-15603463)
chr4 (400-570)||(56241844-56242017)
chr4 (423-596)||(9889318-9889493)
chr4 (423-596)||(9893638-9893814)
chr4 (410-582)||(15619531-15619703)
chr4 (514-589)||(33574199-33574274)
chr4 (434-596)||(54150464-54150629)
chr4 (412-595)||(6505117-6505303)
chr4 (434-596)||(31520354-31520518)
chr4 (509-596)||(55638738-55638825)
chr4 (510-595)||(46926065-46926150)
chr4 (513-595)||(54488625-54488707)
chr4 (355-426)||(26652035-26652107)
chr4 (423-596)||(14075942-14076117)
chr4 (518-595)||(41866179-41866256)
chr4 (452-596)||(48550173-48550320)
chr4 (518-588)||(19599487-19599556)
chr4 (513-595)||(38306031-38306113)
chr4 (400-595)||(38263813-38264001)
chr4 (452-579)||(48908231-48908359)
chr4 (414-596)||(54735634-54735818)
chr4 (405-565)||(2175161-2175324)
chr4 (479-596)||(14054837-14054954)
chr4 (512-580)||(54487219-54487287)
chr4 (402-482)||(55638887-55638967)
chr4 (512-582)||(53914918-53914987)
chr4 (520-596)||(22694580-22694656)
chr4 (512-580)||(16492946-16493014)
chr4 (518-582)||(36150629-36150693)
chr4 (513-580)||(22699762-22699829)
chr4 (513-580)||(22980701-22980768)
chr4 (513-580)||(22994288-22994355)
chr4 (518-596)||(28947732-28947810)
chr4 (519-582)||(39993579-39993642)
chr4 (509-595)||(523166-523252)
chr4 (423-568)||(30887165-30887312)
chr4 (518-580)||(46958048-46958110)
chr4 (518-596)||(53532002-53532080)
chr4 (541-596)||(4649912-4649967)
chr4 (541-596)||(45779993-45780047)
chr4 (46-93)||(51922486-51922532)
chr4 (400-596)||(38693954-38694151)
chr4 (526-595)||(48556585-48556655)
chr4 (441-482)||(20191785-20191826)
chr4 (512-565)||(38740316-38740369)
chr4 (514-565)||(47384982-47385033)
chr4 (518-580)||(33843807-33843869)
chr4 (513-583)||(40335636-40335706)
chr4 (512-553)||(8754177-8754217)
chr4 (518-595)||(14597609-14597685)
chr4 (441-482)||(39733392-39733433)
chr4 (434-475)||(47384943-47384984)
chr4 (548-596)||(1616515-1616562)
chr4 (512-573)||(8683034-8683097)
chr4 (355-391)||(30841973-30842009)
chr4 (512-580)||(39438880-39438948)
chr4 (512-580)||(41751199-41751267)
[»] chr3 (67 HSPs)
chr3 (348-596)||(10334005-10334256)
chr3 (423-596)||(38172290-38172466)
chr3 (410-596)||(23496253-23496435)
chr3 (424-596)||(35425277-35425451)
chr3 (403-596)||(16246079-16246273)
chr3 (394-596)||(20813059-20813263)
chr3 (405-595)||(42318254-42318446)
chr3 (394-582)||(31084121-31084311)
chr3 (395-595)||(52966793-52966996)
chr3 (394-595)||(23207052-23207254)
chr3 (405-596)||(38125425-38125618)
chr3 (434-596)||(26519617-26519782)
chr3 (425-596)||(10853250-10853424)
chr3 (423-596)||(50664701-50664876)
chr3 (414-596)||(3348176-3348361)
chr3 (423-596)||(30811515-30811690)
chr3 (426-595)||(48189426-48189597)
chr3 (400-596)||(35930657-35930856)
chr3 (400-596)||(38340725-38340923)
chr3 (426-595)||(8424714-8424885)
chr3 (400-595)||(53074822-53075019)
chr3 (423-588)||(53179791-53179958)
chr3 (393-595)||(15511360-15511564)
chr3 (426-595)||(44939400-44939570)
chr3 (396-596)||(44224677-44224880)
chr3 (441-596)||(42475669-42475827)
chr3 (434-583)||(21224943-21225095)
chr3 (393-582)||(25847945-25848136)
chr3 (526-596)||(55154549-55154619)
chr3 (504-595)||(19877443-19877534)
chr3 (512-595)||(34561142-34561225)
chr3 (510-596)||(4984613-4984699)
chr3 (449-582)||(30809942-30810078)
chr3 (424-536)||(31618930-31619045)
chr3 (46-94)||(10333698-10333746)
chr3 (523-591)||(29716674-29716742)
chr3 (519-583)||(22737055-22737119)
chr3 (513-567)||(7012675-7012729)
chr3 (518-596)||(40415279-40415357)
chr3 (541-595)||(52813278-52813332)
chr3 (512-580)||(49526668-49526736)
chr3 (518-565)||(10852727-10852774)
chr3 (519-596)||(14651085-14651161)
chr3 (518-567)||(23918882-23918931)
chr3 (519-595)||(21023201-21023275)
chr3 (414-565)||(32357444-32357597)
chr3 (513-580)||(41459250-41459317)
chr3 (518-565)||(42644302-42644349)
chr3 (513-567)||(44225600-44225654)
chr3 (511-565)||(52931586-52931640)
chr3 (526-567)||(30736172-30736213)
chr3 (441-482)||(37698489-37698530)
chr3 (410-482)||(22736910-22736982)
chr3 (518-554)||(38626752-38626788)
chr3 (452-595)||(45423753-45423898)
chr3 (513-596)||(25181245-25181327)
chr3 (518-569)||(30301199-30301250)
chr3 (518-580)||(29252124-29252186)
chr3 (523-565)||(52836030-52836072)
chr3 (441-482)||(28884254-28884295)
chr3 (513-566)||(33548341-33548394)
chr3 (441-482)||(40244074-40244115)
chr3 (512-565)||(48089632-48089685)
chr3 (403-471)||(14959641-14959709)
chr3 (355-391)||(38125650-38125686)
chr3 (355-391)||(42318186-42318222)
chr3 (513-565)||(53567967-53568019)
[»] chr7 (55 HSPs)
chr7 (410-596)||(37639380-37639569)
chr7 (395-596)||(3622430-3622634)
chr7 (410-596)||(38230018-38230207)
chr7 (401-596)||(48459651-48459849)
chr7 (423-596)||(44967369-44967545)
chr7 (403-595)||(47021862-47022057)
chr7 (423-596)||(3342753-3342929)
chr7 (394-595)||(39391108-39391312)
chr7 (410-580)||(3750637-3750809)
chr7 (410-596)||(10371928-10372116)
chr7 (410-596)||(37562520-37562709)
chr7 (401-596)||(9456046-9456243)
chr7 (394-580)||(42740326-42740515)
chr7 (400-596)||(3375430-3375629)
chr7 (404-596)||(12632053-12632248)
chr7 (421-595)||(43631667-43631843)
chr7 (423-595)||(386452-386627)
chr7 (452-596)||(34010332-34010478)
chr7 (424-595)||(46541564-46541738)
chr7 (393-596)||(34365952-34366157)
chr7 (405-595)||(47217512-47217705)
chr7 (405-596)||(43737909-43738103)
chr7 (479-596)||(36920148-36920265)
chr7 (434-590)||(42904527-42904686)
chr7 (439-595)||(48134559-48134717)
chr7 (402-576)||(32205868-32206044)
chr7 (513-595)||(42752162-42752244)
chr7 (518-595)||(12964659-12964736)
chr7 (479-596)||(41715679-41715796)
chr7 (518-596)||(39634135-39634213)
chr7 (355-482)||(47301644-47301779)
chr7 (523-596)||(24770881-24770954)
chr7 (479-596)||(32186962-32187079)
chr7 (479-595)||(34010932-34011048)
chr7 (434-595)||(39977526-39977690)
chr7 (479-592)||(37008325-37008437)
chr7 (518-566)||(38494277-38494325)
chr7 (518-596)||(20088930-20089008)
chr7 (513-595)||(4228603-4228684)
chr7 (543-596)||(19097483-19097536)
chr7 (434-482)||(37886857-37886905)
chr7 (545-596)||(12212439-12212490)
chr7 (518-567)||(16079463-16079512)
chr7 (513-562)||(26975301-26975350)
chr7 (539-583)||(20388688-20388732)
chr7 (518-565)||(33746450-33746497)
chr7 (535-565)||(7169018-7169048)
chr7 (512-566)||(29829310-29829364)
chr7 (512-566)||(36271059-36271113)
chr7 (513-582)||(1766481-1766550)
chr7 (512-565)||(15311217-15311270)
chr7 (555-596)||(25472151-25472192)
chr7 (518-595)||(33936792-33936868)
chr7 (538-595)||(40903139-40903196)
chr7 (423-482)||(12961736-12961793)
[»] chr5 (47 HSPs)
chr5 (410-596)||(22482132-22482321)
chr5 (403-596)||(41834828-41835024)
chr5 (434-596)||(3667821-3667986)
chr5 (410-596)||(32454480-32454669)
chr5 (394-596)||(32030643-32030846)
chr5 (434-596)||(35760156-35760321)
chr5 (423-595)||(33953883-33954057)
chr5 (423-596)||(40495338-40495513)
chr5 (423-595)||(40885166-40885342)
chr5 (412-595)||(9275465-9275651)
chr5 (439-596)||(4292121-4292281)
chr5 (403-596)||(10058010-10058206)
chr5 (421-596)||(40791050-40791227)
chr5 (421-596)||(42146262-42146439)
chr5 (426-596)||(2430277-2430449)
chr5 (452-596)||(13253063-13253209)
chr5 (479-596)||(39987947-39988064)
chr5 (425-596)||(3060204-3060376)
chr5 (433-596)||(41740573-41740739)
chr5 (479-596)||(8049031-8049148)
chr5 (449-596)||(7385912-7386062)
chr5 (395-596)||(24045759-24045962)
chr5 (423-595)||(7714896-7715071)
chr5 (423-595)||(16158446-16158621)
chr5 (393-549)||(28869530-28869688)
chr5 (441-595)||(34106928-34107085)
chr5 (424-592)||(27021085-27021256)
chr5 (453-596)||(5710366-5710511)
chr5 (512-595)||(7178826-7178908)
chr5 (518-566)||(2483724-2483772)
chr5 (511-595)||(23914235-23914319)
chr5 (541-596)||(35847870-35847925)
chr5 (513-567)||(22811075-22811129)
chr5 (514-580)||(24036623-24036689)
chr5 (510-583)||(20068960-20069033)
chr5 (539-596)||(2694740-2694797)
chr5 (518-595)||(2868335-2868411)
chr5 (518-595)||(19784867-19784944)
chr5 (534-598)||(16843599-16843663)
chr5 (513-596)||(33467972-33468055)
chr5 (526-567)||(4569089-4569130)
chr5 (518-567)||(5969956-5970005)
chr5 (349-391)||(2430496-2430538)
chr5 (518-583)||(2861694-2861759)
chr5 (512-565)||(29922990-29923043)
chr5 (512-580)||(36481744-36481813)
chr5 (512-580)||(15368563-15368630)
[»] chr1 (63 HSPs)
chr1 (410-596)||(35569186-35569375)
chr1 (410-596)||(20800261-20800450)
chr1 (394-596)||(48510845-48511050)
chr1 (423-596)||(31223340-31223516)
chr1 (414-596)||(1199784-1199969)
chr1 (394-596)||(5410577-5410781)
chr1 (426-595)||(45710018-45710189)
chr1 (394-595)||(40229455-40229659)
chr1 (393-595)||(13055934-13056138)
chr1 (414-596)||(42850203-42850388)
chr1 (423-596)||(25229973-25230148)
chr1 (401-580)||(4369803-4369984)
chr1 (413-596)||(43728862-43729047)
chr1 (401-595)||(7826339-7826536)
chr1 (423-588)||(12468179-12468346)
chr1 (426-596)||(6464577-6464749)
chr1 (426-596)||(10470559-10470731)
chr1 (414-595)||(11023315-11023498)
chr1 (393-596)||(50977324-50977529)
chr1 (434-595)||(47123363-47123527)
chr1 (416-596)||(6166069-6166251)
chr1 (507-596)||(49242966-49243055)
chr1 (512-596)||(15884285-15884369)
chr1 (405-581)||(36205139-36205318)
chr1 (461-580)||(11561826-11561948)
chr1 (412-595)||(12247375-12247560)
chr1 (457-595)||(34718451-34718592)
chr1 (391-552)||(11051339-11051502)
chr1 (441-596)||(50406114-50406272)
chr1 (513-595)||(4347033-4347114)
chr1 (479-596)||(27801636-27801753)
chr1 (449-595)||(25061218-25061367)
chr1 (479-596)||(26058266-26058383)
chr1 (412-583)||(35536027-35536200)
chr1 (434-580)||(23628706-23628854)
chr1 (519-582)||(47085898-47085961)
chr1 (518-596)||(40352455-40352532)
chr1 (515-595)||(41986-42066)
chr1 (536-596)||(43134532-43134592)
chr1 (541-596)||(29441271-29441326)
chr1 (518-595)||(13344837-13344913)
chr1 (437-594)||(13931603-13931762)
chr1 (516-565)||(32365141-32365190)
chr1 (513-565)||(29759710-29759762)
chr1 (513-565)||(43730059-43730111)
chr1 (522-582)||(47978359-47978419)
chr1 (477-568)||(291729-291820)
chr1 (458-596)||(9447534-9447673)
chr1 (423-552)||(40821791-40821922)
chr1 (518-567)||(5930824-5930873)
chr1 (515-560)||(7335899-7335944)
chr1 (511-566)||(8746128-8746183)
chr1 (512-567)||(40709234-40709288)
chr1 (512-550)||(441592-441630)
chr1 (549-583)||(43134454-43134488)
chr1 (514-580)||(49178235-49178301)
chr1 (519-580)||(15576519-15576580)
chr1 (441-482)||(46581285-46581326)
chr1 (518-582)||(16556299-16556362)
chr1 (544-596)||(30557624-30557675)
chr1 (441-485)||(41571163-41571207)
chr1 (513-565)||(47981810-47981862)
chr1 (512-552)||(50751256-50751296)
[»] chr8 (65 HSPs)
chr8 (394-595)||(28425456-28425660)
chr8 (414-596)||(22936776-22936961)
chr8 (402-596)||(3467462-3467659)
chr8 (412-582)||(40742063-40742236)
chr8 (410-570)||(43550828-43550991)
chr8 (410-596)||(44926778-44926966)
chr8 (447-596)||(41289041-41289193)
chr8 (410-595)||(440173-440361)
chr8 (413-596)||(25697943-25698128)
chr8 (434-596)||(33627017-33627182)
chr8 (396-595)||(6399092-6399294)
chr8 (416-595)||(8124914-8125095)
chr8 (452-596)||(3097189-3097336)
chr8 (402-596)||(40742278-40742473)
chr8 (441-596)||(36121528-36121674)
chr8 (452-596)||(27649725-27649871)
chr8 (424-596)||(4941764-4941939)
chr8 (512-596)||(15206738-15206822)
chr8 (521-596)||(30759288-30759363)
chr8 (510-596)||(38114485-38114570)
chr8 (452-596)||(36114024-36114170)
chr8 (460-596)||(42143347-42143486)
chr8 (484-596)||(26243138-26243250)
chr8 (414-596)||(38152158-38152342)
chr8 (509-596)||(25497731-25497817)
chr8 (459-596)||(24897571-24897710)
chr8 (513-595)||(31246299-31246381)
chr8 (439-582)||(42148971-42149117)
chr8 (417-595)||(30081635-30081815)
chr8 (394-482)||(26243012-26243100)
chr8 (519-596)||(35615758-35615835)
chr8 (541-596)||(3465423-3465478)
chr8 (441-595)||(3619053-3619209)
chr8 (519-565)||(10552923-10552969)
chr8 (402-506)||(41981086-41981193)
chr8 (513-565)||(19649229-19649281)
chr8 (544-596)||(30085622-30085674)
chr8 (513-580)||(26490976-26491043)
chr8 (518-596)||(36779439-36779516)
chr8 (518-580)||(42600969-42601031)
chr8 (514-595)||(40792188-40792268)
chr8 (518-582)||(2071565-2071628)
chr8 (511-583)||(23018137-23018209)
chr8 (405-532)||(26125504-26125634)
chr8 (555-595)||(29023308-29023348)
chr8 (441-485)||(37458400-37458444)
chr8 (509-596)||(11126555-11126642)
chr8 (433-535)||(29023199-29023304)
chr8 (513-580)||(35239541-35239608)
chr8 (518-573)||(39219769-39219824)
chr8 (513-595)||(29970845-29970926)
chr8 (512-565)||(1373081-1373134)
chr8 (441-482)||(24297691-24297732)
chr8 (512-582)||(32767479-32767547)
chr8 (442-563)||(14382162-14382285)
chr8 (513-567)||(33588763-33588817)
chr8 (518-580)||(37667057-37667118)
chr8 (536-582)||(45147247-45147293)
chr8 (518-595)||(22552724-22552801)
chr8 (555-596)||(26125842-26125883)
chr8 (518-567)||(38516346-38516395)
chr8 (444-595)||(8702392-8702545)
chr8 (535-567)||(9695392-9695424)
chr8 (523-567)||(31895765-31895809)
chr8 (513-567)||(39210957-39211008)
[»] chr2 (57 HSPs)
chr2 (410-596)||(5916223-5916411)
chr2 (410-596)||(36312215-36312403)
chr2 (453-596)||(1945020-1945166)
chr2 (410-596)||(7472655-7472843)
chr2 (424-596)||(9988482-9988657)
chr2 (434-596)||(2213468-2213633)
chr2 (433-596)||(28127268-28127434)
chr2 (395-595)||(26207911-26208114)
chr2 (426-595)||(14821117-14821288)
chr2 (424-580)||(28261246-28261405)
chr2 (479-595)||(31224690-31224806)
chr2 (426-596)||(8170267-8170439)
chr2 (414-595)||(32501928-32502111)
chr2 (433-596)||(44619042-44619208)
chr2 (401-595)||(42515958-42516154)
chr2 (395-595)||(36548123-36548325)
chr2 (480-596)||(2213658-2213774)
chr2 (518-596)||(30007534-30007612)
chr2 (433-596)||(2215215-2215379)
chr2 (452-596)||(39141451-39141597)
chr2 (512-596)||(34433287-34433371)
chr2 (400-595)||(28641570-28641768)
chr2 (424-595)||(7296107-7296281)
chr2 (434-595)||(25747864-25748027)
chr2 (509-596)||(38600424-38600511)
chr2 (479-595)||(42089510-42089630)
chr2 (510-596)||(45714649-45714735)
chr2 (412-595)||(7295330-7295514)
chr2 (441-596)||(31562668-31562823)
chr2 (511-596)||(41580691-41580776)
chr2 (434-596)||(3853862-3854027)
chr2 (433-583)||(23358219-23358372)
chr2 (441-596)||(16467055-16467213)
chr2 (512-596)||(18511145-18511229)
chr2 (412-554)||(25940264-25940409)
chr2 (518-588)||(8041328-8041397)
chr2 (514-595)||(34997218-34997299)
chr2 (441-580)||(27911375-27911517)
chr2 (541-596)||(23267345-23267400)
chr2 (513-580)||(23359927-23359994)
chr2 (513-595)||(12110918-12110999)
chr2 (444-506)||(2234899-2234963)
chr2 (513-573)||(30599908-30599968)
chr2 (393-482)||(39106766-39106855)
chr2 (518-566)||(10918652-10918700)
chr2 (512-596)||(11240714-11240797)
chr2 (513-565)||(23377548-23377600)
chr2 (513-595)||(26806238-26806319)
chr2 (519-596)||(1763270-1763346)
chr2 (400-465)||(2212749-2212814)
chr2 (509-565)||(11759801-11759857)
chr2 (557-596)||(33597600-33597639)
chr2 (519-565)||(3654794-3654840)
chr2 (512-565)||(40704670-40704723)
chr2 (518-595)||(42770379-42770455)
chr2 (519-568)||(43436290-43436339)
chr2 (518-595)||(43858194-43858271)
[»] chr6 (27 HSPs)
chr6 (402-596)||(10826012-10826209)
chr6 (410-596)||(13739135-13739323)
chr6 (410-568)||(16548068-16548229)
chr6 (426-595)||(6208047-6208218)
chr6 (400-596)||(33898988-33899187)
chr6 (426-596)||(13744651-13744823)
chr6 (410-596)||(17829981-17830169)
chr6 (434-595)||(29409235-29409399)
chr6 (410-582)||(16442347-16442522)
chr6 (459-596)||(699536-699674)
chr6 (411-596)||(21455812-21455998)
chr6 (520-595)||(1312423-1312498)
chr6 (512-595)||(21254863-21254945)
chr6 (452-595)||(31132435-31132580)
chr6 (518-596)||(5584032-5584109)
chr6 (411-596)||(7215505-7215691)
chr6 (513-595)||(16121985-16122067)
chr6 (536-596)||(32599445-32599505)
chr6 (541-596)||(15151488-15151543)
chr6 (525-596)||(29399776-29399846)
chr6 (512-565)||(1499990-1500043)
chr6 (512-578)||(882776-882842)
chr6 (518-595)||(3605736-3605812)
chr6 (535-596)||(26274610-26274671)
chr6 (513-573)||(29682202-29682262)
chr6 (519-565)||(25208723-25208769)
chr6 (441-482)||(27825574-27825615)
[»] scaffold0369 (1 HSPs)
scaffold0369 (423-595)||(8391-8566)
[»] scaffold0007 (1 HSPs)
scaffold0007 (426-595)||(29107-29278)
[»] scaffold0005 (2 HSPs)
scaffold0005 (410-596)||(253057-253246)
scaffold0005 (518-595)||(219693-219769)
[»] scaffold0394 (1 HSPs)
scaffold0394 (410-596)||(5813-6002)
[»] scaffold0381 (1 HSPs)
scaffold0381 (423-596)||(9053-9228)
[»] scaffold0983 (1 HSPs)
scaffold0983 (423-595)||(2252-2427)
[»] scaffold0217 (1 HSPs)
scaffold0217 (412-595)||(2011-2197)
[»] scaffold0014 (1 HSPs)
scaffold0014 (509-596)||(118393-118480)
[»] scaffold0172 (1 HSPs)
scaffold0172 (513-595)||(15242-15323)
[»] scaffold0009 (1 HSPs)
scaffold0009 (518-567)||(199381-199430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (518-583)||(301565-301630)
[»] scaffold0015 (1 HSPs)
scaffold0015 (518-596)||(65540-65617)
[»] scaffold0031 (2 HSPs)
scaffold0031 (518-565)||(99702-99749)
scaffold0031 (518-565)||(99918-99965)
[»] scaffold0184 (1 HSPs)
scaffold0184 (441-482)||(9258-9299)
[»] scaffold0041 (1 HSPs)
scaffold0041 (538-595)||(46822-46879)
[»] scaffold0128 (1 HSPs)
scaffold0128 (509-565)||(38369-38425)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 348 - 596
Target Start/End: Original strand, 51922791 - 51923043
Alignment:
Q  348 gaattggtgaaccaatacaaatccatttatgattttggataagtcaagaataagatatttacttttaaatacaactaaaa-ggatagtttgatcattata 446  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  51922791 gaatttgtgaaccaatacaaatccatttatgattttggataagtcaagaataagatatttacttttaaatacaactaaaaaggatagtttggtcattata 51922890  T
Q  447 catttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaac 543  Q
    |||| ||||| |||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  51922891 cattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcagattcaac 51922990  T
Q  544 tcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  51922991 tcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattc 51923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 425 - 596
Target Start/End: Complemental strand, 26652005 - 26651831
Alignment:
Q  425 aaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattcaaa 521  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||   |||| ||||| |||||||||||||||||||||||||  |||    
T  26652005 aaaggatagtttggtcattatacattcaaaatcaattttgattcaaactatccaaataacatcgactcataagaattacttttagtaaagtgtatctaaa 26651906  T
Q  522 cataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  26651905 cataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattc 26651831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 16566219 - 16566408
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||   ||||| || | |||| |||||||     
T  16566219 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 16566318  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16566319 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 16566408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 394 - 595
Target Start/End: Complemental strand, 43772311 - 43772107
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| ||||||||||||||||||| || ||||||||||||||| |||||| ||| ||||||| |||||||||||| | ||||||||||   |||||||     
T  43772311 agaatgagatatttacttttaaatataattaaaaggatagtttggtcattacacacttaaaatcaattttgattcatattatccaaacaacatcaactcg 43772212  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| |||| ||  ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43772211 taagaatcacttctaaaaaagtgtatccaaacataaatcgattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaat 43772112  T
Q  591 caatt 595  Q
    |||||    
T  43772111 caatt 43772107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 360 - 595
Target Start/End: Complemental strand, 13183272 - 13183034
Alignment:
Q  360 caatacaaatccatttatgattttggataagtcaagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaa 459  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||||| ||||| ||    
T  13183272 caataaaaattcatttatgattttggataagttaagaataagatatttacttttaaatacaatttaaaggatagtttggtcattttacattcaaaatcaa 13183173  T
Q  460 ttttgattcaaactatcc---aaacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaacca 556  Q
    |||||||| ||| |||||   ||||||||||| | || ||| | |||||   |||||||| ||||||||||||||||||| || ||||  ||||||||||    
T  13183172 ttttgatttaaattatccaaaaaacatcaacttataaaaatcatttttaaataagtgtatccaaacataaatcaattcaccttaaacttgcttttaacca 13183073  T
Q  557 aaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||| ||||| |||||||| || |||||||||||    
T  13183072 aaatcaattatctcagactcaattttatcaaaatcaatt 13183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 401 - 596
Target Start/End: Complemental strand, 42945079 - 42944881
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaat 497  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||   ||||| || ||||||    
T  42945079 gatatttacttttaaatataattaaaaggatagtttggtcattatacatttaaaatcaattttgatacatactatccaaacaacatcaacacataagaat 42944980  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||   |||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  42944979 cacttttaagtaagtatatctaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattc 42944881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 403 - 596
Target Start/End: Complemental strand, 19592410 - 19592214
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatta 499  Q
    ||||||||| ||||||||| |||||| ||| |||| ||||| |||||| ||||| |||||| ||||||||||||||||||   |||| ||  |||||| |    
T  19592410 tatttacttctaaatacaattaaaagaataatttggtcattgtacattcaaaatcaattttcattcaaactatccaaacaacgtcaattcgtaagaatca 19592311  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19592310 cttttagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatcaattc 19592214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 39636689 - 39636888
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaa 496  Q
    |||||||||||| |||||| || |||||||||| |||| || ||| ||||||||||| |||||||||||| ||||||||||||   |||||||  |||||    
T  39636689 agatatttacttgtaaatataattaaaaggatattttggtcgttacacatttaaaatcaattttgattcatactatccaaacaacatcaactcgtaagaa 39636788  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | |||||||   |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39636789 tcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 39636888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 423 - 582
Target Start/End: Complemental strand, 48550586 - 48550424
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||   |||||||| |||||| |||| || |||||| ||| ||    
T  48550586 taaaatgatagtttgatcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtttatcca 48550487  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||    
T  48550486 aacataaatcaattcacatccaactcacttttaaccaaaatcaattctatcaaaatcaattct 48550424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 394 - 596
Target Start/End: Original strand, 49519628 - 49519833
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| ||||||||||||||||||| || ||||| ||||||||| |||||| ||| ||||||| |||||| || || ||||||||||||   |||| |||    
T  49519628 agaatgagatatttacttttaaatataattaaaatgatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaatatcaattca 49519727  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| | |||||   |||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||     
T  49519728 taagaatcatttttaagcaagtgtatccaaacataaataaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaac 49519827  T
Q  591 caattc 596  Q
    ||||||    
T  49519828 caattc 49519833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 434 - 596
Target Start/End: Complemental strand, 29149455 - 29149290
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||| | || ||| ||||||| |  ||||||| |||||||||||||    
T  29149455 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 29149356  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  29149355 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 29149290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 426 - 596
Target Start/End: Complemental strand, 43781674 - 43781502
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||   |||||||| |||||| |||||||   |||||||| |||||    
T  43781674 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 43781575  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43781574 ataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 43781502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 405 - 596
Target Start/End: Complemental strand, 48407874 - 48407681
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattact 501  Q
    |||| |||||||||||| |||||||||| |||  ||||| |||||| ||||| |||||||||||||||||||||||    ||||||||| |||||| |||    
T  48407874 tttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcact 48407775  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    || |   |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48407774 ttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 48407681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 46830237 - 46830052
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| |||||||||| |||| ||| || ||||||||||| |||||||||  | | ||||||||||   |||||||| |||||| | |||||  |||    
T  46830237 aaatacaattaaaaggataatttggtcaatacacatttaaaatcaattttgatgtagaatatccaaacaacatcaactcataagaatcaattttaagaaa 46830138  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  46830137 gtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattc 46830052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 395 - 580
Target Start/End: Complemental strand, 4954238 - 4954050
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaa 491  Q
    |||| |||||| || |||||||||||| |||||||||| || | |||||| ||||||||||||||||||||||||| |||||||   ||||||||||||     
T  4954238 gaatgagatatataattttaaatacaattaaaaggataattaggtcattacacatttaaaattaattttgattcaacctatccaaacaacatcaactcat 4954139  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||||| |||||||    || |||  |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  4954138 aagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaaatcaatt 4954050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 14072430 - 14072605
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  |||||| ||||| ||||| |||||||||||||||||||||||||   ||||||||  ||||| |||| || |||||||||| ||    
T  14072430 taaaaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcattagaatcacttctattaaagtgtatcca 14072529  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| |||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  14072530 aacataa-tcaatttaccttcaactcacttttaaacaaaatcaattctctcaaactcaattctatcaaaatcaattc 14072605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 426 - 595
Target Start/End: Original strand, 54152975 - 54153146
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| |||||||||||||||||| ||||||   ||||||||  ||||| |||| |||||||||||||||||||    
T  54152975 aaggataatttagtcattagacattcaaaatcaattttgattcaaactattcaaacaacatcaactcatgagaatcacttctagtaaagtgtattcaaac 54153074  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||    
T  54153075 ataa-tcaattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaatt 54153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 14564318 - 14564129
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttag 506  Q
    ||||||||||||| |||||||||  ||| |||||||| ||| ||||| ||||||||||||| ||||||||||| ||   ||||| |||||| |||||||     
T  14564318 ttttaaatacaacaaaaaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaa 14564219  T
Q  507 -taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     | ||| |||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14564218 ctgaag-gtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 14564129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 405 - 596
Target Start/End: Original strand, 30842041 - 30842234
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattact 501  Q
    |||| |||||||||||| |||||||||| |||  ||||| |||||| ||||| |||||||||||||||||||||||    ||||||||| |||||| |||    
T  30842041 tttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaatgaaatcaactcataagaatcact 30842140  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    || |   |||||||| ||||||||| ||||||||| |  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  30842141 ttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 30842234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 396 - 595
Target Start/End: Original strand, 49136422 - 49136624
Alignment:
Q  396 aataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaa 492  Q
    |||| |||||||| ||| ||| |||| |||||||||| |||| ||||| |||||| ||||| |||||||||| ||| ||| ||||||   |||||||| |    
T  49136422 aatatgatatttagtttcaaaaacaattaaaaggataatttggtcattgtacattcaaaatcaattttgattaaaattattcaaacaacatcaactcata 49136521  T
Q  493 agaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatca 592  Q
    ||||| |||||||    ||||||| |||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  49136522 agaatcacttttaagtgagtgtatccaaacataaatcaattcacatcaaactcacttttaaccataatcaattctctcaaactcaattataccagaatca 49136621  T
Q  593 att 595  Q
    |||    
T  49136622 att 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 479 - 596
Target Start/End: Original strand, 39187720 - 39187837
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||||| | |||||| |||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  39187720 aacatcaactaacaagaatcacttctagtaaagtgtatccaaacataaatcaattcacattcaaattacttttaaccaaaatcaattctctcaaactcaa 39187819  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  39187820 ttctatcaaaatcaattc 39187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 6138791 - 6138603
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||  | ||||| ||||||||| |||||| ||||| ||| | |||||| ||||||||||||||||||   |||||||| | |||| | |||||     
T  6138791 ttttaaatattattaaaatgatagtttggtcattacacattcaaa-tcaattttcattcaaactatccaaacaacatcaactcatatgaatcatttttaa 6138693  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
      |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  6138692 ataagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattc 6138603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 32238214 - 32238043
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| | |||||||||||||||||||||||   |||||||| | |||| |||| || || ||||||| |||||    
T  32238214 aaggataatttagtcattagacattcaaaatcagttttgattcaaactatccaaacaacatcaactcatatgaatcacttctaatatagtgtatccaaac 32238115  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  32238114 ataac-caattcacattcaactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 32238043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 441 - 596
Target Start/End: Original strand, 25312660 - 25312818
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    ||||||||| |||||  |||||||||||||  |||||||||| ||||   ||| ||||||  ||||||  ||||||||| |||||| |||||||||||||    
T  25312660 attatacatctaaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtatccaaacaaaaatcaattcaca 25312759  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  25312760 tctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 25312818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 421 - 596
Target Start/End: Complemental strand, 26426275 - 26426098
Alignment:
Q  421 actaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtatt 517  Q
    |||||| ||||| | || |||||||||||| | ||| |||||||||||||  ||||||||||   ||||||||||||||| ||||||| | ||| ||||     
T  26426275 actaaagggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatc 26426176  T
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||| | ||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  26426175 caaacataa-tcaatttatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattc 26426098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 441 - 595
Target Start/End: Original strand, 13167470 - 13167627
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    ||||| |||||||||  ||||||||||||| ||||||||||||||   |  || |||||| |||||||     |||||| |||| |||||||||||||||    
T  13167470 attatgcatttaaaagcaattttgattcaatctatccaaacatcattaatacataagaatcacttttaaatgggtgtatccaaatataaatcaattcaca 13167569  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  13167570 ttcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatt 13167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 414 - 595
Target Start/End: Original strand, 28986939 - 28987120
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| ||||| | ||  ||| ||||||  |||||||||| |||||||||||||||||||||||||   |||||||| || ||| ||||  ||| |     
T  28986939 aaatacaattaaaatggtaagttggtcattacccatttaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcactta-agtga- 28987036  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28987037 gtgtattcaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 28987120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 15603264 - 15603463
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaa 496  Q
    ||||||||| ||||||| ||||  ||||||||| |||||||||| | |||| ||||| |||||||| | ||| ||||||||||   |||||||| |||||    
T  15603264 agatatttagttttaaaaacaatcaaaaggataatttgatcattgtgcattcaaaatcaattttgacttaaattatccaaacaacatcaactcataagaa 15603363  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | | |||||   |||| |||  ||||| ||||||||||||||  ||||||||||| |||| |||||||| ||||||||||||||||| ||||||||||||    
T  15603364 tcatttttaagcaagtatatctaaacacaaatcaattcacatcaaactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattc 15603463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 400 - 570
Target Start/End: Complemental strand, 56242017 - 56241844
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaa 496  Q
    ||||||||| |||||||||||| |||||||||| |||| |||||||||||| ||||| |||||||||| |||  ||| ||||   ||||||||| |||||    
T  56242017 agatatttaattttaaatacaattaaaaggatattttggtcattatacattcaaaatcaattttgatttaaatcatctaaacattatcaactcataagaa 56241918  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctc 570  Q
    | |||||||    | ||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||    
T  56241917 tcacttttacattaatgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctc 56241844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 423 - 596
Target Start/End: Complemental strand, 9889493 - 9889318
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  |||||||||||| ||||| |||||| |||||||||||||||||| ||   ||||| |||||| ||||| |    ||||||| ||    
T  9889493 taaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagtgagtgtatcca 9889394  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| | ||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9889393 aacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 9889318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 9893638 - 9893814
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| ||| ||||||||||||| ||||| |||||| ||| ||||||||||||||   |||||||| |||||| ||||| |     |||||| ||    
T  9893638 taaaaggataatttaatcattatacattcaaaatcaattttaatttaaactatccaaacaacatcaactcataagaatcactttcaagtgggtgtatcca 9893737  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| ||||||||| ||  ||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  9893738 aacatatatcaattcatatctaactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattc 9893814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 410 - 582
Target Start/End: Original strand, 15619531 - 15619703
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||| |||| |||  |||||| ||||| || || | |||||||||||||||||||||||   ||||| || | |||| |||| |||    
T  15619531 ttttaaatacaattaaaatgataatttagtcattacacattcaagatca-ttttgattcaaactatccaaacaacatcaacccacatgaatcacttatag 15619629  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    |||  ||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15619630 taa--tgtatccaaacatacatcaattcacatccaactcactttttaccaaaatcaattctctcaaactcaattct 15619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 514 - 589
Target Start/End: Original strand, 33574199 - 33574274
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  33574199 tattcaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 33574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 54150464 - 54150629
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||||||||| |||||  |||||||||| ||  |||||||||| ||   ||| | |||||| | |||||   |||||||| |||||| ||||||    
T  54150464 tttgataattatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcatttttaacgaagtgtatccaaacaaaaatca 54150563  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  54150564 attcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 54150629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 412 - 595
Target Start/End: Original strand, 6505117 - 6505303
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||| ||| |||||||||| ||   |||||||| ||| ||||| |||||||| | ||||||||||||||   |||| |||  | ||| |||||||       
T  6505117 ttaaatgcaattaaaaggataattcagtcattatatattcaaaatcaattttgacttaaactatccaaacaacatcaagtcatgataatcacttttatat 6505216  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     |||||||  ||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  6505217 gagtgtatctaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaatt 6505303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 434 - 596
Target Start/End: Complemental strand, 31520518 - 31520354
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| |||||| ||||||||||| |||||| |||||||||| |||||   |||||||||| || ||| ||||||| ||| |  |||  |||||||||||     
T  31520518 tttggtcattacacatttaaaatcaatttttattcaaactacccaaaaaacatcaactcataaaaatcacttttaataa-gcatatctaaacataaatcc 31520420  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||  ||||||||||||||||||||| |||||| |||||||  |||||||||||||||||||    
T  31520419 attcacacccaactcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaattc 31520354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 55638825 - 55638738
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||  ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  55638825 aagtgtatctaaacataaatcaatttacatttaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattc 55638738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 510 - 595
Target Start/End: Original strand, 46926065 - 46926150
Alignment:
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||    
T  46926065 agtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaatt 46926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 54488625 - 54488707
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||  |||||||||||    
T  54488625 gtattcaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 54488707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 355 - 426
Target Start/End: Complemental strand, 26652107 - 26652035
Alignment:
Q  355 tgaaccaatacaaatccatttatgattttggataagtcaagaataagata-tttacttttaaatacaactaaa 426  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  26652107 tgaaccgatacaaatccatttatgattttggataagtcaagaataagatactttacttttaaatacaattaaa 26652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 14075942 - 14076117
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattactttta-gtaaagtgtattc 518  Q
    |||| ||||| |||| |||||| ||||| || ||||||||||||| ||| ||  ||||||   |||| ||| |||||| ||||||| ||| | ||| | |    
T  14075942 taaagggatactttggtcattacacattcaagattaattttgatttaaagtactcaaacaacatcaattcataagaatcacttttaagtata-tgtttcc 14076040  T
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||| ||||  |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  14076041 aaacataaatcaatttacatcaaactcacttt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaattc 14076117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 41866179 - 41866256
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||| || |||||||||||    
T  41866179 caaacataaatcaattcacatccaactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaatt 41866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 48550173 - 48550320
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||| || ||| |||||||||||   |||| ||| | ||||||||||||    |||| || |||||||||||||||| ||||  ||||||||    
T  48550173 aaaatcaattttaatccaatctatccaaacaatatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcact 48550272  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||||||||||||||| ||| ||||||||| ||||||||||||    
T  48550273 tttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattc 48550320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 518 - 588
Target Start/End: Complemental strand, 19599556 - 19599487
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaa 588  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  19599556 caaacataaatcaatt-acattcaactcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 38306031 - 38306113
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||  |||| ||||||||  |||||||||||    
T  38306031 gtatccaaacataaatcaattcgcattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 38306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 595
Target Start/End: Original strand, 38263813 - 38264001
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatcaactcaaaagaatta 499  Q
    ||||||| | ||||||||| ||  ||||||||| |||| ||||| | |||||||||| |||||  ||||||||      ||||| |||||| ||| || |    
T  38263813 agatattcagttttaaataaaatgaaaaggataatttggtcattgttcatttaaaataaatttgtattcaaac------aacat-aactcataagtatca 38263905  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||    ||| ||||||||||||||| |||||||||  |||||| |||||| |||||| |||| |||||||||||||| || |||||||||||    
T  38263906 cttttaagtgagtatattcaaacataaattaattcacatcaaactcaattttaagcaaaattaattttctcaaactcaattatatcaaaatcaatt 38264001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 579
Target Start/End: Original strand, 48908231 - 48908359
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| ||||||||||||| |||||||||||   |||||| | | ||||||||||||    || |||| |||||||||  ||||||||||  ||||||||    
T  48908231 aaaatcaattttgattcaagctatccaaacaacatcaacttatatgaattacttttaagcgag-gtatccaaacataac-caattcacatcaaactcact 48908328  T
Q  549 tttaaccaaaatcaattctctcaaactcaat 579  Q
    |||||||||||||||||||||||||||||||    
T  48908329 tttaaccaaaatcaattctctcaaactcaat 48908359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 54735818 - 54735634
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattactttta-gtaa 509  Q
    ||||| || |||| ||||| |||| |||||| ||||| || || |||||||||| ||| ||  ||||||   |||||||| |||||| ||||||| |||     
T  54735818 aaatataattaaagggatactttggtcattacacattcaagatcaattttgatttaaaatactcaaacaacatcaactcataagaatcacttttaagtat 54735719  T
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | ||| | |||||||||| ||||| ||||  |||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  54735718 a-tgtttccaaacataaaccaatttacatcaaactcaattt-aaccaaaatcaattttctcaaactcaattctatcaaaatcaattc 54735634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 405 - 565
Target Start/End: Complemental strand, 2175324 - 2175161
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattact 501  Q
    |||| ||| ||||| || |||||||||| |||  ||||| ||| || ||||| |||||| ||||||||||||||||||   ||||| ||  | ||| |||    
T  2175324 tttagtttaaaatataattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcact 2175225  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||    |||| || |||||||||||||||||||||  ||||||||||||| |||||||||||    
T  2175224 tttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaatt 2175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 479 - 596
Target Start/End: Original strand, 14054837 - 14054954
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    ||||||||||  ||| ||| |||||||   |||| ||| |||||||||||||||||||||  ||||||||||| || ||| |||||||| ||||||||||    
T  14054837 aacatcaacttgaaataatcacttttatataagtttatccaaacataaatcaattcacatcaaactcacttttgactaaactcaattctttcaaactcaa 14054936  T
Q  579 ttctaccaaaatcaattc 596  Q
    || |  ||||||||||||    
T  14054937 ttatgtcaaaatcaattc 14054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 54487287 - 54487219
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||| |||||||||||||||| ||||||||||||||||| | | ||||||||||| ||||||||||||    
T  54487287 tgtatccaaacataaatcaatttacattcaactcacttttgatcgaaatcaattctatcaaactcaatt 54487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 55638967 - 55638887
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| | ||| ||||| |||||||||||| | ||||||||||    
T  55638967 atatttacttttaaatacaattaaaatgatagtttggtcattacatattcaaaatcaattttgattcatattatccaaaca 55638887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 512 - 582
Target Start/End: Original strand, 53914918 - 53914987
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||| |||||||||||||||| ||||||||||||||||||  ||||||| ||||||| ||||||||||||    
T  53914918 tgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaatcgattctctgaaactcaattct 53914987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 596
Target Start/End: Complemental strand, 22694656 - 22694580
Alignment:
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattct-ctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| || |  |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||    
T  22694656 aacataaatcactttatgttcaactcacttttaaccaaaatcaattctacttaaa-tcaattctaccaaaatcaattc 22694580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 16492946 - 16493014
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||| |||||| | ||||| ||||||    
T  16492946 tgtatccaaacataaataaattcacattcaactcacttttaatcaaactcaattatttcaaaatcaatt 16493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 36150629 - 36150693
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||| | ||||| ||||||||    
T  36150629 caaacataaatcactttacattcaactcacttttaatcaaaatcaattatatcaaaatcaattct 36150693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Original strand, 22699762 - 22699829
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| ||||||||||||| || |||||||||| ||||||||||||||||||||||  |||| ||||||    
T  22699762 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22699829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 22980768 - 22980701
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| ||||||||||||| || |||||||||| ||||||||||||||||||||||  |||| ||||||    
T  22980768 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22980701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 22994355 - 22994288
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| ||||||||||||| || |||||||||| ||||||||||||||||||||||  |||| ||||||    
T  22994355 gtatccaaacataaatcactttacattcaacttacttttaaccaaaatcaattctaccaaaatcaatt 22994288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 28947810 - 28947732
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt-ctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| || || |||||||||||||||||||||||||||| | || ||| ||||||| ||||||||||||||    
T  28947810 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattccacttaaa-tcaattccaccaaaatcaattc 28947732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 39993579 - 39993642
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||||||||||| |||||| |||||| ||||||||||||| | ||| ||||||||    
T  39993579 aaacataaatcaattcacatttaactcatttttaatcaaaatcaattctatgaaaatcaattct 39993642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 509 - 595
Target Start/End: Original strand, 523166 - 523252
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| || |||||||||||||||||| ||| |||||||||||  |||||||||||| | |||| |||||||  | |||||||||||    
T  523166 aagtgaatccaaacataaatcaattcatattgaactcactttttcccaaaatcaattttgtcaagctcaattaaatcaaaatcaatt 523252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 568
Target Start/End: Complemental strand, 30887312 - 30887165
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatc---aactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||| || |||| |||||| ||||| ||||| ||||||||| ||||| |||||||||||   |||||| |||||| |||||||     |||||| ||    
T  30887312 taaaaggttaatttggtcattacacattcaaaatcaattttgatacaaaccatccaaacatcattaactcataagaatcacttttatattggtgtatcca 30887213  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 568  Q
    ||||||||||||||  |||  ||||||| |||||| ||||| |||||||    
T  30887212 aacataaatcaatt-tcatcaaactcacgtttaactaaaataaattctc 30887165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 518 - 580
Target Start/End: Original strand, 46958048 - 46958110
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||| | || || |||||||||||||||||||||||||||||| ||||| ||||||    
T  46958048 caaacataaattactttacgttcaactcacttttaaccaaaatcaattctatcaaaatcaatt 46958110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 518 - 596
Target Start/End: Original strand, 53532002 - 53532080
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| ||  | |||| ||||||||||||||| |||||||||| | |||||||||||| || ||||||||||||    
T  53532002 caaacataaaccacgttacatccaactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattc 53532080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 4649967 - 4649912
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||| |||||||||||||||| ||||||||||||| || ||||||||||||    
T  4649967 aactcgcttctaaccaaaatcaattcactcaaactcaattttatcaaaatcaattc 4649912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 45780047 - 45779993
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| | ||||||||||    
T  45780047 aactcactttttaccaaaatcaatt-tctcaaactcaattctatcgaaatcaattc 45779993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 51922486 - 51922532
Alignment:
Q  46 ttaaggaaggaaggatggaggtgagagttgaaatgaggtcaatttctt 93  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||    
T  51922486 ttaaggaagga-ggttggaggtgagagttgaaatgaggtcaatttctt 51922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 38693954 - 38694151
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaa 496  Q
    |||| |||| ||||| ||| || |||||| ||| |||| ||||||  |||| |||||||||||||||| ||| ||| ||| ||   ||||| || |||||    
T  38693954 agatgtttagttttatatataattaaaagtataatttggtcatta--cattcaaaattaattttgatttaaattattcaagcaagatcaacccataagaa 38694051  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | |||||||    ||||||| ||||||||||  ||||  || |||||| |||||||  ||||||||||||| | |||||||||  || |||||| |||||    
T  38694052 tcacttttaagcgagtgtatccaaacataaactaatttgcactcaacttacttttagacaaaatcaattcttttaaactcaatcatatcaaaattaattc 38694151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 595
Target Start/End: Original strand, 48556585 - 48556655
Alignment:
Q  526 aatcaattcacattcaactcacttttaaccaaaa-tcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||| ||||||||   ||||| |||||| | ||||||||||||||| |||||||||||    
T  48556585 aatcaattcacattcaagtcactttttttcaaaaatcaattttatcaaactcaattctatcaaaatcaatt 48556655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 20191826 - 20191785
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  20191826 attatacatttaaaattaattttgattcaagttatccaaaca 20191785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 38740369 - 38740316
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||| ||||||||||||| ||||  ||||||||||||||| ||||||||||||    
T  38740369 tgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 38740316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 47384982 - 47385033
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| ||||||||||||||||||||| |||||| |||||| ||||| |||||    
T  47384982 tatttaaacataaatcaattcacatttaactcatttttaatcaaaaacaatt 47385033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 580
Target Start/End: Original strand, 33843807 - 33843869
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||||| || |||| ||||||||||||| ||| |||||||||  ||||| ||||||    
T  33843807 caaacataaatcactttacatccaactcacttttagccagaatcaattcaatcaaaatcaatt 33843869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 583
Target Start/End: Original strand, 40335636 - 40335706
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    |||| ||||||||||||| || | ||| || ||||||||||||||||| |||| | ||||| |||||||||    
T  40335636 gtatacaaacataaatcactttaaatttaattcacttttaaccaaaattaattttatcaaaatcaattcta 40335706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 8754177 - 8754217
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaa 553  Q
    ||||| |||||||||||||||| |||||||||||||||||||    
T  8754177 tgtatccaaacataaatcaatt-acattcaactcacttttaa 8754217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 14597685 - 14597609
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||| ||  |||||||||||||||||| |||||| | || | | ||| ||||||| |||||||||||||    
T  14597685 caaacataaatcacttttcattcaactcacttttaatcaaaattagttatgt-aaaatcaattcaaccaaaatcaatt 14597609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 39733392 - 39733433
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||| |||||||||||||||  ||||||||||||||    
T  39733392 attatacattcaaaattaattttgatcaaaactatccaaaca 39733433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 475
Target Start/End: Original strand, 47384943 - 47384984
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactat 475  Q
    |||||| ||||||||| |||||| ||||||||||||||||||    
T  47384943 tttgataattatacatctaaaatcaattttgattcaaactat 47384984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 596
Target Start/End: Original strand, 1616515 - 1616562
Alignment:
Q  548 ttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||  |||| ||||||||| ||||||||||||    
T  1616515 ttttaaccaaaatcaattct-acaaaatcaattctatcaaaatcaattc 1616562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 573
Target Start/End: Complemental strand, 8683097 - 8683034
Alignment:
Q  512 tgtattcaaacataaatcaattc--acattcaactcacttttaaccaaaatcaattctctcaaa 573  Q
    ||||| ||||||||||| |||||  ||||| |||||| ||||||||||| |||||| |||||||    
T  8683097 tgtatccaaacataaattaattcttacattaaactcaattttaaccaaattcaattttctcaaa 8683034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 391
Target Start/End: Original strand, 30841973 - 30842009
Alignment:
Q  355 tgaaccaatacaaatccatttatgattttggataagt 391  Q
    |||||||||| |||||||||||||||||| |||||||    
T  30841973 tgaaccaataaaaatccatttatgattttagataagt 30842009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 39438880 - 39438948
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||| ||||||||||  | ||||||||||||||||||||||  ||||| |||||  ||||| ||||||    
T  39438880 tgtatacaaacataaacaacttcacattcaactcacttttaagtaaaattaattcattcaaaatcaatt 39438948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 41751267 - 41751199
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||||| ||||| || |  || ||||||||||||| |||||| ||||| |||||| ||||||    
T  41751267 tgtattcaaacattaatcactttatcttgaactcacttttaaacaaaataaattcactcaaaatcaatt 41751199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 348 - 596
Target Start/End: Original strand, 10334005 - 10334256
Alignment:
Q  348 gaattggtgaaccaatacaaatccatttatgattttggataagtcaagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatac 447  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||     
T  10334005 gaatttgtgaaccaatacaaatccatttatgattttagataagtcaagaataagatatttacttttaaatacaattaaaaggatagtttggtcattataa 10334104  T
Q  448 atttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaact 544  Q
    ||| ||||| |||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  10334105 attcaaaatcaattttgattcaaactatccaaacaacgtcaactcataagaattacttttagtaaagtgtatccaaacataaatcaattcatattcaact 10334204  T
Q  545 cacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10334205 gacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 10334256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 596
Target Start/End: Complemental strand, 38172466 - 38172290
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||||||||||| |||||| ||||| ||||| |||||| ||||||||||||||||||   |||||||| |||||| |||| || |||||||||| ||    
T  38172466 taaaaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatcca 38172367  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  38172366 aacataaatcaattcacatcccactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattc 38172290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 23496253 - 23496435
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||| ||||||||  |||||||||||| ||||| |||||||||||||||||||||||||   ||||| |  |||||| ||||||||    
T  23496253 ttttaaatacaattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccgcaagaatcacttttag 23496352  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||       | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23496353 ta-------tccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 23496435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 424 - 596
Target Start/End: Original strand, 35425277 - 35425451
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    ||||||||| |||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||| |  |||||||||| |||    
T  35425277 aaaaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaatatcaactcataagaatcacttctgttaaagtgtatccaa 35425376  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35425377 acataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 35425451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 403 - 596
Target Start/End: Complemental strand, 16246273 - 16246079
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaatta 499  Q
    |||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||   |||||||||||  |||||| |    
T  16246273 tatttacttttacatacaattaaaaggatagtttgatcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcctaagaatca 16246174  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| || |||||||| | |||||||||||||||| ||||  |||||||||||||| |||||||||  |||||||||||||||||  || ||||||||    
T  16246173 cttctattaaagtgtttccaaacataaatcaatttacatctaactcacttttaactaaaatcaat--tctcaaactcaattctattaatatcaattc 16246079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 394 - 596
Target Start/End: Original strand, 20813059 - 20813263
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactca 490  Q
    ||||| ||| |||||||||||||||||| ||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||   ||||||||||||    
T  20813059 agaatgagaaatttacttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactca 20813158  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| ||||||    |||| ||| |||||| ||||||||||| || |||||||||||||||||||  |||||||||||||||| |||||| ||||||    
T  20813159 taagaatcacttttgaataagtatatccaaacaaaaatcaattcaaatccaactcacttttaaccaaacacaattctctcaaactc-attctatcaaaat 20813257  T
Q  591 caattc 596  Q
    ||||||    
T  20813258 caattc 20813263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 405 - 595
Target Start/End: Original strand, 42318254 - 42318446
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattact 501  Q
    |||| |||||||||||| |||||||||| |||  ||||| |||||| ||||| ||||||||||||||||||||||||   ||||||||| |||||| |||    
T  42318254 tttagttttaaatacaattaaaaggataattttgtcattttacattcaaaatcaattttgattcaaactatccaaacgaaatcaactcataagaatcact 42318353  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    || |   |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42318354 ttcaaacaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 42318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 394 - 582
Target Start/End: Original strand, 31084121 - 31084311
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||| |||||| | ||| ||||| |||| |||||||||||||||||| |   |||| |||    
T  31084121 agaatgagatatttacttttaaatacaattaaaatgatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaataatatcaagtca 31084220  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
     |||||| |||||||  || |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||    
T  31084221 taagaatcacttttaagaa-gtgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctttcaaaatcaattct 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 395 - 595
Target Start/End: Complemental strand, 52966996 - 52966793
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaa 491  Q
    |||| |||||| || |||||||||||| |||||||||| |||| |||||| ||||||||||| ||||||||||||| ||||| |||||   ||||||||     
T  52966996 gaatgagatatataattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatctaaacaacatcaactcat 52966897  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    |||||| |||||||    || |||  |||||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||||||| |||||||    
T  52966896 aagaatcacttttaagtgagggtacccaaacataaatcaattcacatcaaagtcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatc 52966797  T
Q  592 aatt 595  Q
    ||||    
T  52966796 aatt 52966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 394 - 595
Target Start/End: Complemental strand, 23207254 - 23207052
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca--aacatcaactcaa 491  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||| |  || ||||||||||||||||||||||||| |  ||||||||||||     
T  23207254 agaataagatatttacttttaaatacaattaaaaggatggtttggtcattacaagttcaaaattaattttgattcaaactatcaaacaacatcaactcat 23207155  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    || ||| |||| ||  ||||||||| |||||||||||||||||||||  |||||| |||||||||||||||||| |  |||| |||||| || |||||||    
T  23207154 aa-aatcacttgtaaaaaagtgtatccaaacataaatcaattcacatcaaactcatttttaaccaaaatcaattataacaaaatcaattatatcaaaatc 23207056  T
Q  592 aatt 595  Q
    ||||    
T  23207055 aatt 23207052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 405 - 596
Target Start/End: Complemental strand, 38125618 - 38125425
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattact 501  Q
    |||| |||||||||||| |||||||||| |||  ||||| |||||| ||||||||||||||||||||||||||||||   ||||||||| |||||| |||    
T  38125618 tttagttttaaatacaattaaaaggataattttgtcattttacattcaaaattaattttgattcaaactatccaaacgaaatcaactcataagaatcact 38125519  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    || |   |||||||| ||||||| ||||||||||| |  ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  38125518 ttcaaacaagtgtatccaaacat-aatcaattcacctcaaacccacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattc 38125425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 26519617 - 26519782
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| ||||| |||||||||||| ||||||| |||||||||||||||||   |||||| | || ||| ||||||| |  ||||||| |||||||||||||    
T  26519617 tttggtcattttacatttaaaatcaattttgtttcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 26519716  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  26519717 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 26519782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 425 - 596
Target Start/End: Complemental strand, 10853424 - 10853250
Alignment:
Q  425 aaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaa 521  Q
    |||||||| |||| ||| || ||||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||    ||| ||| ||||    
T  10853424 aaaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaa 10853325  T
Q  522 cataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10853324 cataaatcaatttatattaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 10853250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 50664701 - 50664876
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca--actcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||| ||||||||||| ||||| ||||| |||||| ||| |||||||| ||||| ||  ||||  |||||| |||| ||     |||||| |||    
T  50664701 taaaaggataatttgatcattacacattcaaaatcaattttaatttaaactatctaaacaacataactcttaagaatcacttctaagtgtgtgtatccaa 50664800  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50664801 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 50664876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 414 - 596
Target Start/End: Original strand, 3348176 - 3348361
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| |||||||||| |||| ||| || ||||| ||||| |||||||||  ||| ||||||||||   |||||||| ||||||||||||||   ||    
T  3348176 aaatacaattaaaaggataatttggtcaatacacattcaaaatcaattttgatataaaatatccaaacaacatcaactcataagaattacttttaaggaa 3348275  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| |||||||||||||||| |||| |||||||||| |||||||||||||||| || ||||||||||||| ||||||||||||    
T  3348276 gtgtatccaaacataaatcaatttacatccaactcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattc 3348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 596
Target Start/End: Complemental strand, 30811690 - 30811515
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||| ||| ||| ||||||| ||||| ||||| |||||||||||||||||||||||||   |||| ||| |||||| |||| |  |||||||||| ||    
T  30811690 taaaagaataatttaatcattacacattcaaaatcaattttgattcaaactatccaaacaatatcaagtcataagaatcacttctgttaaagtgtatcca 30811591  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||||||||||    
T  30811590 aacataa-tcaattcacattcaactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattc 30811515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 48189597 - 48189426
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||||||||| ||||| |||||| ||||||||||||||||||   |||||||| |||||| |||| |  ||| |||||| |||||    
T  48189597 aaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaac 48189498  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  48189497 ataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 48189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 35930657 - 35930856
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacat---caactcaaaagaa 496  Q
    ||||||||| |||||||||||| ||||| |||| |||| |||||| ||||| ||||| |||||||||| |||| ||||||||||   ||||||| |||||    
T  35930657 agatatttaattttaaatacaattaaaatgatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaacattatcaactcataagaa 35930756  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | |||| ||    ||||||| ||| |||||||||||||| ||  |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  35930757 tgacttatacattagtgtatccaagcataaatcaattcatatcaaactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattc 35930856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 38340725 - 38340923
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaa 496  Q
    ||||||||| ||||| ||| ||  ||||||||| |||| ||| || ||||||||||| |||||| ||||||||||||||||||   |||||| | || ||    
T  38340725 agatatttagttttatatataataaaaaggataatttggtcactacacatttaaaatcaatttttattcaaactatccaaacaacgtcaacttataaaaa 38340824  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  |||||| ||||||||||||    
T  38340825 ttacttttaataa-gcatatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattc 38340923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 8424885 - 8424714
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||| | ||||| |||||||||||||||||| ||||||   |||||||| |||||| |||| || | |||||||| |||||    
T  8424885 aaggataatttagtcattacacactcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattgaagtgtatccaaac 8424786  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8424785 ataa-tcaattcacgttcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaattcaatt 8424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 400 - 595
Target Start/End: Original strand, 53074822 - 53075019
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaa 496  Q
    ||||||||| || ||||||||| ||||||| ||  ||| || |||  |||||||||| ||||||||||||||||||||||||| ||   ||||| |||||    
T  53074822 agatatttagttataaatacaattaaaagggtaagttggtctttacgcatttaaaatcaattttgattcaaactatccaaacaacatccactcataagaa 53074921  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    | |||||||    ||||||| ||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  53074922 tcacttttaagtgagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatt 53075019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 423 - 588
Target Start/End: Original strand, 53179791 - 53179958
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca--tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||| |||| ||||| |||||| ||||| |||||||||| ||||||||||||||  |||||||| || ||| |||||||  ||||||||| |||    
T  53179791 taaaaggataatttggtcattgtacattcaaaatcaattttgatttaaactatccaaacaaatcaactcataaaaatcacttttaaaaaagtgtatccaa 53179890  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaa 588  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| | | ||||||||||||| ||||    
T  53179891 acataaatcaatttacatcaaactcacttttaaccaaaatcaattatataaaactcaattctatcaaa 53179958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 393 - 595
Target Start/End: Complemental strand, 15511564 - 15511360
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactc 489  Q
    |||||| ||||||||| ||||||| |||| ||||||  || |||  ||||||  |||| ||||| |||||| ||||||||||||||||||   |||||||    
T  15511564 aagaatgagatatttaattttaaacacaattaaaagagtaatttcgtcattacgcattcaaaatcaatttttattcaaactatccaaacaatatcaactc 15511465  T
Q  490 aaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
    | || ||| ||||||| ||| | |||| ||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||  ||||| |||||    
T  15511464 ataaaaatcacttttaataa-gcgtatccaaacataaatcaattcacacccaactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaa 15511366  T
Q  590 tcaatt 595  Q
    ||||||    
T  15511365 tcaatt 15511360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 44939570 - 44939400
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| |||||||||||||||| ||||||| ||||||   |||||||| |||||| |||| ||||||| ||||| |||||    
T  44939570 aaggataatttagtcattagacattcaaaattaattttgattaaaactattcaaacaacatcaactcataagaatcacttatagtaaa-tgtatccaaac 44939472  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| |||||||| ||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  44939471 ataa-tcaattcatattcaactcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaatt 44939400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 396 - 596
Target Start/End: Original strand, 44224677 - 44224880
Alignment:
Q  396 aataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaa 492  Q
    |||| |||||||| ||| ||| |||| |||||||||| |||| |||||  ||||| ||||| |||||||| | ||| ||||||||||   |||||||| |    
T  44224677 aatatgatatttagtttcaaaaacaattaaaaggataatttggtcattgcacattcaaaatcaattttgactaaaattatccaaacaacatcaactcata 44224776  T
Q  493 agaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatca 592  Q
    ||||| |||||||    ||||||| |||||||||||||||||| ||  |||||||||||||||| |||||||| |||||||||||||||||||  |||||    
T  44224777 agaatcacttttaagtgagtgtatccaaacataaatcaattcatatcaaactcacttttaaccataatcaattatctcaaactcaattctaccggaatca 44224876  T
Q  593 attc 596  Q
    ||||    
T  44224877 attc 44224880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 441 - 596
Target Start/End: Original strand, 42475669 - 42475827
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    ||||||||| |||||  |||||||||||||  |||||||||| ||||   ||| ||||||  ||||||  |||||||||||||||| |||||||||||||    
T  42475669 attatacatctaaaagcaattttgattcaatgtatccaaacaacaacaattcataagaatcgcttttaacaaagtgtattcaaacaaaaatcaattcaca 42475768  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |  ||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  42475769 tctaactcacttttaatcaaaatcaattctctcaaactcaattctataaaaatcaattc 42475827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 434 - 583
Target Start/End: Original strand, 21224943 - 21225095
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| |||||||||| | | ||| ||||||||||||||||||| ||||   ||||||||  ||||||  ||||||  ||||||||| |||||||| ||||    
T  21224943 tttggtcattatacactcataatcaattttgattcaaactatcaaaacgacatcaactcgtaagaatcgcttttaagaaagtgtatccaaacatatatca 21225042  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  21225043 atttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcta 21225095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 393 - 582
Target Start/End: Original strand, 25847945 - 25848136
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actc 489  Q
    |||||| | ||||||| |||| ||||||| | |||| ||| |||| |||||| ||||||||||| |||||| |||||| ||||||||||| ||   ||||    
T  25847945 aagaatgaaatatttagtttttaatacaatttaaagtataatttggtcattacacatttaaaatcaatttttattcaa-ctatccaaacaacacaaactc 25848043  T
Q  490 aaaagaattactttta-gtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    | |||||| | ||||| || ||| |||| |||||||||||||||||| ||| ||||||||||| |||||||| |||| ||||||||||||||||    
T  25848044 ataagaatcatttttaagtgaag-gtatccaaacataaatcaattcatattaaactcactttttaccaaaattaattttctcaaactcaattct 25848136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 526 - 596
Target Start/End: Original strand, 55154549 - 55154619
Alignment:
Q  526 aatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  55154549 aatcaattcacattcaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattc 55154619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 19877443 - 19877534
Alignment:
Q  504 tagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||| |||  ||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  19877443 tagtaaagtatatctaaacataaatcaatttacatccaactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaatt 19877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 512 - 595
Target Start/End: Original strand, 34561142 - 34561225
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||| ||||||| |||||||||||    
T  34561142 tgtatccaaacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaatt 34561225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 4984613 - 4984699
Alignment:
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||| ||||||| |||||| || ||||||||||||    
T  4984613 agtgtatccaaacataaatcaattcacatctaactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattc 4984699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 582
Target Start/End: Complemental strand, 30810078 - 30809942
Alignment:
Q  449 tttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactc 545  Q
    ||||||| ||||||||||||||||||||||||||||| |   | | |||||| |||||||   ||| ||| |||| |||||||||||||||||| |||||    
T  30810078 tttaaaagtaattttgattcaaactatccaaacatcatcaatttataagaatcacttttaagtaagcgtaatcaatcataaatcaattcacatttaactc 30809979  T
Q  546 acttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||| |||||| | ||||| ||||||||    
T  30809978 acttttaaccaaactcaattttatcaaaatcaattct 30809942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 424 - 536
Target Start/End: Complemental strand, 31619045 - 31618930
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||||||   |||||||||||| |||||| |||| ||    || |||| |||    
T  31619045 aaaaggataagttgatcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttctaagtgagagtatccaa 31618946  T
Q  521 acataaatcaattcac 536  Q
    ||||||||||||||||    
T  31618945 acataaatcaattcac 31618930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 10333698 - 10333746
Alignment:
Q  46 ttaaggaaggaaggatggaggtgagagttgaaatgaggtcaatttcttc 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10333698 ttaaggaaggaaggatggaggtgagagttgaaatgaggtcaatttcttc 10333746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 29716742 - 29716674
Alignment:
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  29716742 ataaatcaattcatatttaactcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 519 - 583
Target Start/End: Original strand, 22737055 - 22737119
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||||||||||| |||||| ||| |||||||||||||||||||| | |||||||||||||||    
T  22737055 aaacataaatcaatttacattctacttacttttaaccaaaatcaattttttcaaactcaattcta 22737119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 7012675 - 7012729
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  7012675 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 7012729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 40415357 - 40415279
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| |||| |||| ||||||||||||||| |||||| ||||  | ||||||||||||| ||||||||||||    
T  40415357 caaacataaattaatttacatccaactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaattc 40415279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 52813278 - 52813332
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  52813278 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 52813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 580
Target Start/End: Complemental strand, 49526736 - 49526668
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||| |||||||||||||||| ||| |||| |||||||||| ||||||||||||| ||||| ||||||    
T  49526736 tgtatccaaacataaatcaatttacaatcaattcacttttaatcaaaatcaattctatcaaaatcaatt 49526668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 565
Target Start/End: Complemental strand, 10852774 - 10852727
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||    
T  10852774 caaacataaatcactttacattcaactcacttttaaccaaaatcaatt 10852727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 519 - 596
Target Start/End: Complemental strand, 14651161 - 14651085
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||||||||| | ||||||||||||||||| ||||||||||||| ||||| |||||| ||  |||||||||||    
T  14651161 aaacacaaatcaatt-atattcaactcacttttaatcaaaatcaattctatcaaaatcaattttattaaaatcaattc 14651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 23918882 - 23918931
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||||||    
T  23918882 caaacataaatcactttacattcaactcacttttaaccaaaattaattct 23918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Complemental strand, 21023275 - 21023201
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||||| |  |||| ||||||||| |||||||||||    
T  21023275 aaacataaatcacttcaaattcaactcacatttaaccaaaatcaatt-ttacaaa-tcaattctatcaaaatcaatt 21023201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 565
Target Start/End: Original strand, 32357444 - 32357597
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| |||| ||||| ||||||||| | || || ||||| |||||| ||||||| || |||||||   ||||| || |||||| |||||||    |    
T  32357444 aaatacaattaaagggatattttgatcatcacacgttcaaaatcaattttaattcaaagtacccaaacaacatcaacacataagaatcacttttaaatga 32357543  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| |||||||||||||||||| ||||  || |||| || ||||||||||||||    
T  32357544 gtgttttcaaacataaatcaatttacatcaaattcac-ttcaaccaaaatcaatt 32357597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 580
Target Start/End: Original strand, 41459250 - 41459317
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||||||||||||| |  ||||| ||||||||||||||| |||||||  ||||| ||||||    
T  41459250 gtattcaaacataaatcaatttatcttcaaatcacttttaaccaaagtcaattcaatcaaaatcaatt 41459317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 565
Target Start/End: Original strand, 42644302 - 42644349
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||||| || |||||||||||||||||||| ||||||||||    
T  42644302 caaacataaatcactttacattcaactcacttttaactaaaatcaatt 42644349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 44225600 - 44225654
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||| ||||||||||||| || ||||| |||||||||||||| ||||||||||||    
T  44225600 gtatccaaacataaatcactttacattaaactcacttttaacgaaaatcaattct 44225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 565
Target Start/End: Complemental strand, 52931640 - 52931586
Alignment:
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||| |||||||||||||||| ||| | |||||||||||||| ||||||||||    
T  52931640 gtgtatccaaacataaatcaatttacactaaactcacttttaactaaaatcaatt 52931586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 567
Target Start/End: Original strand, 30736172 - 30736213
Alignment:
Q  526 aatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  30736172 aatcaattcacatacaactcacttttaactaaaatcaattct 30736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 37698530 - 37698489
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  37698530 attatacatgtaaaatcaattttgattcaaactatccaaaca 37698489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 410 - 482
Target Start/End: Original strand, 22736910 - 22736982
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||| ||||||| |||||| ||| |||| |||||| ||||| ||||| ||||||||||||||| |||| ||||    
T  22736910 tttttaatacaattaaaagtataatttgttcattacacattcaaaatcaattttgattcaaaccatcccaaca 22736982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 518 - 554
Target Start/End: Original strand, 38626752 - 38626788
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaac 554  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38626752 caaacataaatcatttcacattcaactcacttttaac 38626788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 452 - 595
Target Start/End: Complemental strand, 45423898 - 45423753
Alignment:
Q  452 aaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| ||||||||||||| ||||||||||| ||   | | | |||||| ||||||| |  | | ||| |||||||||| ||||| |  |||||||||||    
T  45423898 aaaatcaattttgattcaagctatccaaacaacatgaattgataagaatcacttttactttaatatatccaaacataaaccaattaag-ttcaactcact 45423800  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||  ||||||||||||| ||| | |||||| | ||||||||||||    
T  45423799 tttaggcaaaatcaattctatcagaatcaattatgccaaaatcaatt 45423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 596
Target Start/End: Original strand, 25181245 - 25181327
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||||| | || ||||| ||||||||||||| |||||||||||||  |||| ||||||| | ||| ||||||||    
T  25181245 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct-acaaaatcaattcaatcaatatcaattc 25181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 30301250 - 30301199
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctct 569  Q
    ||||||||| ||| |  ||||||||||||||||||| |||||||||||||||    
T  30301250 caaacataattcactatacattcaactcacttttaatcaaaatcaattctct 30301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 29252186 - 29252124
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||||||||||||||| ||| | ||||||||||| | ||||||||||||  ||||| ||||||    
T  29252186 caaacataaatcaatttacaattaactcacttttgatcaaaatcaattcaatcaaaatcaatt 29252124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 565
Target Start/End: Original strand, 52836030 - 52836072
Alignment:
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||||||||||||||||  ||||||||| ||||||||||    
T  52836030 ataaatcaattcacattcaacatacttttaactaaaatcaatt 52836072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 28884254 - 28884295
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||| |||| ||||||||||| ||||||||||||||    
T  28884254 attatacattcaaaaataattttgattaaaactatccaaaca 28884295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 566
Target Start/End: Original strand, 33548341 - 33548394
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    |||||||||||||||| | |||| ||||||||| |||| ||| |||||||||||    
T  33548341 gtattcaaacataaattacttcatattcaactccctttaaactaaaatcaattc 33548394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 40244074 - 40244115
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||||||||  |||||||||| ||||||||||||||    
T  40244074 attatacatttaaaaacaattttgattaaaactatccaaaca 40244115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 48089685 - 48089632
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||| ||| ||||||||| || |||||||||||||||||||| | ||||||||    
T  48089685 tgtatccaatcataaatcattttacattcaactcacttttaactagaatcaatt 48089632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 14959641 - 14959709
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaa 471  Q
    |||||| |||||||||||| ||||| |||| ||| ||| ||| ||||| ||||| || |||||||||||    
T  14959641 tatttaattttaaatacaattaaaaagataatttaatcgttacacattcaaaatcaagtttgattcaaa 14959709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 391
Target Start/End: Complemental strand, 38125686 - 38125650
Alignment:
Q  355 tgaaccaatacaaatccatttatgattttggataagt 391  Q
    |||||||||| |||||||||||||||||| |||||||    
T  38125686 tgaaccaataaaaatccatttatgattttagataagt 38125650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 391
Target Start/End: Original strand, 42318186 - 42318222
Alignment:
Q  355 tgaaccaatacaaatccatttatgattttggataagt 391  Q
    |||||||||| |||||||||||||||||| |||||||    
T  42318186 tgaaccaataaaaatccatttatgattttagataagt 42318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 53567967 - 53568019
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| ||||||||||| | ||  |||||||||||||||||| |||||||||||    
T  53567967 gtatccaaacataaattacttttcattcaactcacttttaatcaaaatcaatt 53568019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 37639380 - 37639569
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||   ||||| || |||||| |||||||     
T  37639380 ttttaaatacaattaaaaggatagtttagtcattacacatttaaaattaattttgattcaaactatccaaacaacatcaacccacaagaatcacttttaa 37639479  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| | | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37639480 taaagtttctccaaacataaatcaattcacattcaattcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 37639569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 395 - 596
Target Start/End: Complemental strand, 3622634 - 3622430
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaa 491  Q
    |||| |||||||||||| ||||||||| |||||||||| ||||||| ||| ||||||||||| |||||||||| | ||||||||||||   |||||||      
T  3622634 gaatgagatatttacttctaaatacaattaaaaggatactttgatcgttacacatttaaaatcaattttgatttatactatccaaacaacatcaactcgt 3622535  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    |||||| |||||||   |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3622534 aagaatcacttttaagtaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatc 3622435  T
Q  592 aattc 596  Q
    |||||    
T  3622434 aattc 3622430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 38230018 - 38230207
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| |||| |||||||||  |||||| ||||||||||| |||||||||||||||||||||||||   ||||| || | |||| |||||||     
T  38230018 ttttaaatacaattaaatggatagtttagtcattacacatttaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 38230117  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  38230118 taaaatgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattc 38230207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 401 - 596
Target Start/End: Original strand, 48459651 - 48459849
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaat 497  Q
    |||||||| ||||||||| || ||||||||||||||| |||||| ||| ||||||| |||||| || || |||||||||||| || |   ||| ||||||    
T  48459651 gatatttaattttaaatataattaaaaggatagtttggtcattacacacttaaaatcaattttaatacatactatccaaacaacatccattcataagaat 48459750  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48459751 cacttttaagtaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 48459849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 596
Target Start/End: Complemental strand, 44967545 - 44967369
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||| |||||| | | | ||||| |||||||||||||| ||||||||||   |||||||| |||||| |||| || |||||||||||||    
T  44967545 taaaaggataatttggtcattacaaactcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttctattaaagtgtattca 44967446  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  44967445 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattc 44967369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 403 - 595
Target Start/End: Original strand, 47021862 - 47022057
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatta 499  Q
    ||||||||||||||||||| ||||| |||| |||| |||||  ||||| ||||| |||||| ||||||| ||||||||||   |||| ||  |||||| |    
T  47021862 tatttacttttaaatacaattaaaatgataatttggtcattgcacattcaaaatcaattttcattcaaattatccaaacaacatcaattcgtaagaatca 47021961  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    | | ||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47021962 catctagtaaagtgtatccaaacataaatcaattcactttcaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 47022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 3342753 - 3342929
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||||||||||| |||||| | ||| ||||| |||||||||||||||||| ||||||   |||||||| |||||| |||| || |||||||||| ||    
T  3342753 taaaaggatagtttggtcattacatattcaaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttctattaaagtgtatcca 3342852  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||    
T  3342853 aacataaatcaattcatatccaactcacttttaactaaaatcaattctctcaaactcaattctatcaaaattaattc 3342929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 394 - 595
Target Start/End: Complemental strand, 39391312 - 39391108
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    |||||||||||||||||||||||||||| ||||||||||||| | |||||| || || ||||| |||||||||||||||||| ||||||   |||| |||    
T  39391312 agaataagatatttacttttaaatacaattaaaaggatagttaggtcattacacgttcaaaatcaattttgattcaaactattcaaacaacatcaattca 39391213  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| |||| ||  ||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||   ||| ||||||||| ||||||    
T  39391212 taagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaaaat 39391113  T
Q  591 caatt 595  Q
    |||||    
T  39391112 caatt 39391108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 410 - 580
Target Start/End: Original strand, 3750637 - 3750809
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||| ||||||| ||||||||||||||| |||||| ||||| |||||||||||||||| ||||||||||||||   |||| ||| |||| | | || ||     
T  3750637 tttttaatacaattaaaaggatagtttggtcattacacatt-aaaattaattttgatttaaactatccaaacaacatcaattcataagattcaattatat 3750735  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3750736 taaagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaatt 3750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 10372116 - 10371928
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| |||| |||| ||||  ||||||  |||| ||||| |||||||||||||||||||| ||||   ||||| || |||||| |||| ||     
T  10372116 ttttaaatacaattaaa-ggatggtttagtcattacgcattcaaaatcaattttgattcaaactatccgaacaacatcaacccacaagaatcacttctaa 10372018  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10372017 taaactgtaaccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 10371928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 37562520 - 37562709
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||  | ||||||||||||||| |||||| ||||  ||||| |||||| ||||||||||||||||||   |||||||| | |||| |||||||     
T  37562520 ttttaaatattattaaaaggatagtttggtcattacacatacaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaa 37562619  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
      |||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  37562620 ataagtgtatccaaacataaatcaattcacatccaactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattc 37562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 401 - 596
Target Start/End: Original strand, 9456046 - 9456243
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaat 497  Q
    |||||||| |||||||||||| ||||| |||| |||| ||||| |||||| ||||| ||||||||||||||||||||||||   ||||||||| ||||||    
T  9456046 gatatttagttttaaatacaattaaaaagataatttggtcattttacattcaaaatcaattttgattcaaactatccaaacaagatcaactcataagaat 9456145  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||   |||||||| ||||||| |||||||| || |  |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  9456146 cacttttaaacaagtgtatccaaacat-aatcaatttacctcaaactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatcaattc 9456243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 394 - 580
Target Start/End: Original strand, 42740326 - 42740515
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| ||||||||||||||||||| || ||||| |||| |||| |||||| ||| ||||||| ||||||||| || ||||||||||||   ||||| ||    
T  42740326 agaatgagatatttacttttaaatataattaaaatgatactttggtcattacacacttaaaatcaattttgatacatactatccaaacaatatcaacaca 42740425  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
     |||||| |||||||   |||| |||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  42740426 taagaatcacttttaagtaagtatatctaaacataaatcaattaacattcaacttacttttaaccaaaatcaattctctcaaactcaatt 42740515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 400 - 596
Target Start/End: Original strand, 3375430 - 3375629
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaa 496  Q
    ||||||||| |||||||||||| |||||||||| |||| |||||  ||||| ||||| ||||||||| ||||  ||||||||| ||   ||||| |||||    
T  3375430 agatatttaattttaaatacaattaaaaggataatttggtcattgcacattcaaaatcaattttgatccaaatcatccaaacaacatcgactcataagaa 3375529  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | |||||||    ||||||| |||||| |||||||||||||   |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  3375530 tcacttttaagtgagtgtatccaaacacaaatcaattcacaccaaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 3375629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 404 - 596
Target Start/End: Complemental strand, 12632248 - 12632053
Alignment:
Q  404 atttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattac 500  Q
    ||||| |||||||||||| |||||||||| |||| |||||| ||||| ||||| ||||||||||||||| || ||||||   |||||||| |||||| ||    
T  12632248 atttagttttaaatacaattaaaaggatattttggtcattacacattcaaaatcaattttgattcaaacaattcaaacaacatcaactcataagaatcac 12632149  T
Q  501 ttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||    |||  | ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||    
T  12632148 ttttaagcgagtacactcaaacataaatcaattcacatctaactcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaattc 12632053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 421 - 595
Target Start/End: Complemental strand, 43631843 - 43631667
Alignment:
Q  421 actaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtatt 517  Q
    |||||||||||| | |||| |||||||||| | ||| |||||||||||||  ||||||||||   ||||||||||||||| ||||||| | |||  |||     
T  43631843 actaaaaggataatatgataattatacattcacaatcaattttgattcaatatatccaaacaatatcaactcaaaagaatcacttttaattaagcatatc 43631744  T
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43631743 caaacataa-tcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 43631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 423 - 595
Target Start/End: Complemental strand, 386627 - 386452
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaatt-aattttgattcaaactatccaaacatcaac--tcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||| ||||||||||||||||| | ||||||||||||| ||||||||||| || |  ||| |||||| |||||| |   ||| ||| ||    
T  386627 taaaaggataatttggtcattatacatttaaaaatcaattttgattcaatctatccaaacaacatcaatcataagaatcacttttcggttagtatatcca 386528  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  386527 aacataaatcaattcacattcagctaacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaatt 386452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 34010332 - 34010478
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    |||||||||||||||||||||||||||||||   |||||||| |||||  |||||||    ||||||||||||||||| ||| |||| || |||||||||    
T  34010332 aaaattaattttgattcaaactatccaaacaacatcaactcataagaaccacttttaaatgagtgtattcaaacataa-tcagttcatatccaactcact 34010430  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  34010431 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattc 34010478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 424 - 595
Target Start/End: Original strand, 46541564 - 46541738
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaatt-aattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||||||| ||||| |||||   |||| ||| |||||| |||||| |   | | || |||    
T  46541564 aaaaggataatttggtcattatacatttaaaaatcaattttgattcaatctatcaaaacaatatcaa-tcataagaatcacttttcggtgaatatactca 46541662  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  46541663 aacataaaccaattcacattcaactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 46541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 393 - 596
Target Start/End: Complemental strand, 34366157 - 34365952
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactc 489  Q
    |||||| ||||||||| ||||||| |||  ||||||| || |||| ||||||  | || ||||| |||||| ||||||||||||||||||   |||||||    
T  34366157 aagaatgagatatttaattttaaacacagttaaaagggtaatttggtcattacgccttcaaaatcaatttttattcaaactatccaaacaacatcaactc 34366058  T
Q  490 aaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
    | || ||| ||||||| ||| | |||| ||||||||||||||||||||  ||||| ||||||||| |||||||||||| |||||||| ||| || |||||    
T  34366057 ataaaaatcacttttaataa-gcgtatccaaacataaatcaattcacacccaactaacttttaactaaaatcaattctttcaaactccattatatcaaaa 34365959  T
Q  590 tcaattc 596  Q
    |||||||    
T  34365958 tcaattc 34365952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 595
Target Start/End: Complemental strand, 47217705 - 47217512
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattact 501  Q
    |||| ||| ||||| || |||||||||| |||  ||||| ||| || ||||| |||||| ||||||||||||||||||   ||||| ||  | ||| |||    
T  47217705 tttagtttaaaatataattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaactatccaaacaacatcaacccatcaaaatcact 47217606  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||    |||| || |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  47217605 tttaagcgagtgcatccaaacataaatcaattcacatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 47217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 596
Target Start/End: Complemental strand, 43738103 - 43737909
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattact 501  Q
    |||||||| |||||||| ||||||| || |||| |||||  ||||| ||||| ||||||||||||||||||||||||| ||   ||||| |||||| |||    
T  43738103 tttactttaaaatacaattaaaaggttaatttggtcatttcacattcaaaatcaattttgattcaaactatccaaacaacatccactcataagaatcact 43738004  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||   |||| ||| |||||| ||||||||||| ||  |||| |||||||| ||||||||||||||| |||||||||| |   |||||||||||    
T  43738003 tttaaataagtttatccaaacaaaaatcaattcatatctaactaacttttaatcaaaatcaattctcttaaactcaattatgttaaaatcaattc 43737909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 479 - 596
Target Start/End: Complemental strand, 36920265 - 36920148
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    ||||||||||||||||||| || |||| | ||  ||||||||||||||||||||| | ||  ||||||||||||||||||||||||||| ||||||||||    
T  36920265 aacatcaactcaaaagaatcacctttaattaaacgtattcaaacataaatcaatttatatctaactcacttttaaccaaaatcaattctttcaaactcaa 36920166  T
Q  579 ttctaccaaaatcaattc 596  Q
    || || |||||| |||||    
T  36920165 ttttatcaaaattaattc 36920148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 590
Target Start/End: Original strand, 42904527 - 42904686
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||||| ||||||||| ||||||||||| ||| ||| ||||||   | || ||| |||||| |||||||    |||||||  ||||||||||||    
T  42904527 tttgataattatgcatttaaaagtaattttgatttaaaatatacaaacaaaattaattcataagaatcacttttaaacgagtgtatcaaaacataaatca 42904626  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
    ||||||||  |||||| ||||| |||||| ||||||||||||||||||||||| ||||||    
T  42904627 attcacatctaactcatttttatccaaaaacaattctctcaaactcaattctatcaaaat 42904686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 439 - 595
Target Start/End: Original strand, 48134559 - 48134717
Alignment:
Q  439 tcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattca 535  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||   |||||| | || ||| |||||||   |||| ||| ||||||||| |||||||     
T  48134559 tcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacttataaaaatcacttttaaacaagtttatccaaacataa-tcaattct 48134657  T
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    | |  ||| |||||||||| |||||||||||||||||||||||||||| |||||| ||||    
T  48134658 cctcaaacccacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaatt 48134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 402 - 576
Target Start/End: Original strand, 32205868 - 32206044
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattat-acatttaaaattaattttgattcaaactatccaa--acatcaactcaaaagaatt 498  Q
    ||||||| ||||||||| || | ||||| || |||| |||||   ||||||||||| |||||||||||| |||||| ||  |||| |||||| ||||||     
T  32205868 atatttagttttaaataaaatttaaaggttaatttggtcatttgcacatttaaaatcaattttgattcatactatcaaacaacat-aactcataagaatc 32205966  T
Q  499 acttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactc 576  Q
    |||||||   |||||||| |||||||||||||||||||||  ||| |||||||||  |||||||||||| ||||||||    
T  32205967 acttttaagtaagtgtatccaaacataaatcaattcacatcaaacccacttttaattaaaatcaattctttcaaactc 32206044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 42752244 - 42752162
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||  |||||||||||    
T  42752244 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 42752162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 12964659 - 12964736
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||  ||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||||||    
T  12964659 caaacataaatcaatctacattcaactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 479 - 596
Target Start/End: Original strand, 41715679 - 41715796
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||| ||| | ||||||||||||    |||| || |||||||||||||||| ||||  ||||||||||||| ||||||||||||||| ||| ||||    
T  41715679 aacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 41715778  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  41715779 ttctatcaaaatcaattc 41715796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 39634213 - 39634135
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||  |||| ||||||||  | ||||||||||    
T  39634213 caaacataaatcaattcatattcaactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattc 39634135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 355 - 482
Target Start/End: Complemental strand, 47301779 - 47301644
Alignment:
Q  355 tgaaccaatacaaatccatttatgattttggataagtc--------aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattata 446  Q
    |||||||||| |||||||||||||||||| |||||||         |||||| |||| |||| ||||||||| || |||||||||| |||  ||||| ||    
T  47301779 tgaaccaataaaaatccatttatgattttagataagtatctaaaataagaatgagatgtttagttttaaatataattaaaaggataatttagtcatttta 47301680  T
Q  447 catttaaaattaattttgattcaaactatccaaaca 482  Q
    |||| ||||| |||||||||||||||||||||||||    
T  47301679 cattcaaaatcaattttgattcaaactatccaaaca 47301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 523 - 596
Target Start/End: Complemental strand, 24770954 - 24770881
Alignment:
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| |||| |||||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||    
T  24770954 ataaatcaatttacatccaactcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaattc 24770881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 479 - 596
Target Start/End: Original strand, 32186962 - 32187079
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||| ||| | ||||||||||||    |||| || |||||||||||||||| ||||  ||||||||||||| ||||||||||||||| ||| | ||    
T  32186962 aacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaattaa 32187061  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  32187062 ttctatcaaaatcaattc 32187079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 479 - 595
Target Start/End: Complemental strand, 34011048 - 34010932
Alignment:
Q  479 aacatcaactcaaaagaattactttta-gtaaagtgtattcaaacataaatcaattcacattcaa-ctcacttttaaccaaaatcaattctctcaaactc 576  Q
    |||||||||||| |||||| ||||||| || || ||| | ||||||||||| |||| ||| |||| |||||||| |||||||||||||| ||||||||||    
T  34011048 aacatcaactcataagaatcacttttaagtgaa-tgtttccaaacataaattaatttacactcaaactcacttt-aaccaaaatcaattttctcaaactc 34010951  T
Q  577 aattctaccaaaatcaatt 595  Q
    ||||||| |||||||||||    
T  34010950 aattctatcaaaatcaatt 34010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 434 - 595
Target Start/End: Original strand, 39977526 - 39977690
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| |||| |||| |||||| |||||| ||| ||| ||||||||||   ||||||  ||| ||| |||||||    ||| ||| |||| ||||||||    
T  39977526 tttgataattaaacatctaaaatcaattttaatttaaagtatccaaacaacatcaacttgaaataataacttttatatgagtttatccaaaaataaatca 39977625  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| ||  ||||||||||| || |||||||||||| ||||||| ||||||| |||||||||||    
T  39977626 attcatatcaaactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaatt 39977690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 479 - 592
Target Start/End: Complemental strand, 37008437 - 37008325
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||||||| |||||| |||| ||  ||||||| | ||||||||||||||| ||| |  ||||||||||||||||||||||||||   |||| ||||    
T  37008437 aacatcaactcataagaatcacttataagaaagtgtctccaaacataaatcaat-cacctcaaactcacttttaaccaaaatcaattccaacaaaatcaa 37008339  T
Q  579 ttctaccaaaatca 592  Q
    |||||  |||||||    
T  37008338 ttctataaaaatca 37008325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 518 - 566
Target Start/End: Original strand, 38494277 - 38494325
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||    
T  38494277 caaacataaaccacttcacattcaactcacttttaaccaaaatcaattc 38494325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 518 - 596
Target Start/End: Original strand, 20088930 - 20089008
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct-ctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| || || |||||||||||||||||||||||||||| | || ||| ||||||||| ||||||||||||    
T  20088930 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattatacttaaa-tcaattctatcaaaatcaattc 20089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 4228603 - 4228684
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| ||  |||||||||||||||||| ||||||||||| | | ||| ||||||| |||||||||||||    
T  4228603 gtatccaaacataaatcacttttcattcaactcacttttaatcaaaatcaattatgt-aaaatcaattcaaccaaaatcaatt 4228684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 596
Target Start/End: Original strand, 19097483 - 19097536
Alignment:
Q  543 ctcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||| |||||    
T  19097483 ctcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattc 19097536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 482
Target Start/End: Complemental strand, 37886905 - 37886857
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  37886905 tttgataattatatatttaaaatcaattttgattcaaactatccaaaca 37886857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 545 - 596
Target Start/End: Complemental strand, 12212490 - 12212439
Alignment:
Q  545 cacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| |||||||||||||||| ||||| |||||||||| ||||||||||||    
T  12212490 cacttctaaccaaaatcaattcactcaagctcaattctatcaaaatcaattc 12212439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 16079463 - 16079512
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| ||  ||||||||||||||| ||||||||||||||||    
T  16079463 caaacataaatcacttttcattcaactcactttaaaccaaaatcaattct 16079512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 562
Target Start/End: Complemental strand, 26975350 - 26975301
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatca 562  Q
    |||||||||||||||||| || ||||||||||||||| |||| |||||||    
T  26975350 gtattcaaacataaatcattttacattcaactcacttataactaaaatca 26975301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 583
Target Start/End: Original strand, 20388688 - 20388732
Alignment:
Q  539 tcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||    
T  20388688 tcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 20388732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 565
Target Start/End: Original strand, 33746450 - 33746497
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||| ||||||||| | ||||||||||||||||| |||||||||||    
T  33746450 caaacaaaaatcaatttatattcaactcacttttaatcaaaatcaatt 33746497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 565
Target Start/End: Original strand, 7169018 - 7169048
Alignment:
Q  535 acattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||||||||||||||||||||||||||    
T  7169018 acattcaactcacttttaaccaaaatcaatt 7169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 29829364 - 29829310
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    ||||| ||||||||||||| || |||||||||||| ||||| ||| |||||||||    
T  29829364 tgtatccaaacataaatcactttacattcaactcatttttagccagaatcaattc 29829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 566
Target Start/End: Original strand, 36271059 - 36271113
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    ||||||||||| |||| || || |||||||||| |||||||| ||||||||||||    
T  36271059 tgtattcaaacgtaaaccacttaacattcaacttacttttaagcaaaatcaattc 36271113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 582
Target Start/End: Original strand, 1766481 - 1766550
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    |||| |||| ||||||||||| |  |||||||||||||||| |||||||||||   ||||| ||||||||    
T  1766481 gtatccaaatataaatcaatttaggttcaactcacttttaatcaaaatcaatttaatcaaaatcaattct 1766550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 15311270 - 15311217
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||| ||||||||||||| |  |||||||||||||||||||||| | ||||||    
T  15311270 tgtatccaaacataaatcactatacattcaactcacttttaaccatattcaatt 15311217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 596
Target Start/End: Complemental strand, 25472192 - 25472151
Alignment:
Q  555 caaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||    
T  25472192 caaaatcaattctgtcaaaatcaattctatcaaaatcaattc 25472151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 33936868 - 33936792
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||| || |||||||| | ||||| ||||||||  ||||||  | || |||||||||||||||||||||    
T  33936868 caaacataaatcactttacattcaattaactttgaaccaaaagtaattct-acgaaatcaattctaccaaaatcaatt 33936792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Complemental strand, 40903196 - 40903139
Alignment:
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||  ||||||||||||| ||||| |||||| |  |||||||||||    
T  40903196 ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaatt 40903139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 482
Target Start/End: Original strand, 12961736 - 12961793
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||| |||||||||||||||| ||||| ||||||  | ||| |||||||||||||||||    
T  12961736 taaaatgatagtttgatcattacacattcaaaatt--tgttgcttcaaactatccaaaca 12961793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 2e-63; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 22482132 - 22482321
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||||||||| ||||| |||||||||||||||||||||||||   ||||| || | |||| |||||||     
T  22482132 ttttaaatacaattaaaaggatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 22482231  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  22482232 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattc 22482321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 403 - 596
Target Start/End: Original strand, 41834828 - 41835024
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatta 499  Q
    ||||||||||||||||||| |||||||||| |||| |||||  ||||| ||||| |||||| ||||||||||||||||||   |||| ||  |||||| |    
T  41834828 tatttacttttaaatacaattaaaaggataatttggtcattgcacattcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatca 41834927  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| ||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  41834928 cttctagtaaagtgtatccaaacataaatcaattcacttccaactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattc 41835024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 3667821 - 3667986
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||| | || ||| ||||||| |  ||||||| |||||||||||||    
T  3667821 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 3667920  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  3667921 attcacattcaactcactttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattc 3667986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 32454480 - 32454669
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||| ||||| || ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||   |||||||| |||||| |||||||     
T  32454480 ttttaattacaattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 32454579  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct-accaaaatcaattc 596  Q
      |||||||| ||||||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  32454580 acaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattc 32454669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 394 - 596
Target Start/End: Original strand, 32030643 - 32030846
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatcaact-caaa 492  Q
    ||||| ||| |||||||||||||||||||||||||||||||||  |||||| || || ||||| |||||||||||||||||| |||||| || |  || |    
T  32030643 agaatgagacatttacttttaaatacaactaaaaggatagtttagtcattacaccttcaaaatcaattttgattcaaactattcaaacaacatcaacata 32030742  T
Q  493 agaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatca 592  Q
    ||||| ||||||    |||| |||  ||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  32030743 agaatcacttttgaataagtatatcaaaacaaaaatcaattcacatctaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatca 32030842  T
Q  593 attc 596  Q
    ||||    
T  32030843 attc 32030846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 35760156 - 35760321
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||| | || ||| | ||||| |  ||||||| |||||||||||||    
T  35760156 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcagttttaattgagtgtatccaaacataaatca 35760255  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  35760256 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 35760321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 423 - 595
Target Start/End: Complemental strand, 33954057 - 33953883
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  |||||| ||||| |||||||||||||||||||||||||| ||||   ||||||||  ||||| |||| || |||||||||| ||    
T  33954057 taaaaggataatttagtcattacacattcaaaattaattttgattcaaactatccgaacaacatcaactcatcagaatcacttctattaaagtgtatcca 33953958  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||| |||||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  33953957 aacataa-tcaatttacgttcaactcacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaatt 33953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 423 - 596
Target Start/End: Complemental strand, 40495513 - 40495338
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca--tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||| |||||||||| ||||||  |||| |||||||||| ||||||| ||||||  |||||||| || ||| |||||||  ||||||||| |||    
T  40495513 taaaaggataatttgatcattgtacattccaaatcaattttgatttaaactattcaaacaaatcaactcataaaaatcacttttaaaaaagtgtatccaa 40495414  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| ||||  ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||    
T  40495413 acataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattc 40495338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 595
Target Start/End: Original strand, 40885166 - 40885342
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatt-acttttagtaaagtgtattc 518  Q
    |||||||||| ||||||||||| | ||| ||||| |||||||||||||||||||||||||   |||||||| || || | |||||||   |||||| | |    
T  40885166 taaaaggataatttgatcattacatattcaaaatcaattttgattcaaactatccaaacaatatcaactcataaaaactcacttttaaacaagtgtgtcc 40885265  T
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |||||||||||    
T  40885266 aaacataaatcaattcacatccaactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaatt 40885342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 412 - 595
Target Start/End: Complemental strand, 9275651 - 9275465
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||||||| ||||| |||| |||| |||||| ||||| ||||| || ||| |||||||  |||||||||   |||||||| |||||| | ||||| ||    
T  9275651 ttaaatacaattaaaaagataatttggtcattacacattcaaaatcaagtttcattcaaatcatccaaacaacatcaactcataagaatcaattttatta 9275552  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||| || |||||||||||    
T  9275551 aagtgtatccaaacataaatcaattaacatctaactcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatcaatt 9275465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 439 - 596
Target Start/End: Original strand, 4292121 - 4292281
Alignment:
Q  439 tcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattca 535  Q
    |||||| ||||| |||||||||||||||||||| ||||||||||   |||||  | |||||| |||| || | |||||||| ||||||||||||||||||    
T  4292121 tcattacacattcaaaattaattttgattcaaattatccaaacaatatcaaccaacaagaatcacttctaattaagtgtatccaaacataaatcaattca 4292220  T
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  4292221 cattcaacttatttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattc 4292281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 403 - 596
Target Start/End: Original strand, 10058010 - 10058206
Alignment:
Q  403 tatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatta 499  Q
    |||| |||||| ||||||| ||||| |||| |||| || ||  || || ||||| |||||| ||||||||||||||||||   |||| ||  |||||| |    
T  10058010 tattcactttttaatacaattaaaatgataatttggtcgttgcacgttcaaaatcaattttcattcaaactatccaaacaacatcaattcgtaagaatca 10058109  T
Q  500 cttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| ||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  10058110 cttctagtaaagtgtatccaaacataaatcaattcatttccaactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattc 10058206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 421 - 596
Target Start/End: Complemental strand, 40791227 - 40791050
Alignment:
Q  421 actaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtatt 517  Q
    |||||| ||||| | || |||||||||||| | ||| |||||||||||||  ||||||||||   ||||||||||||||| ||||||| | ||| ||||     
T  40791227 actaaagggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatc 40791128  T
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  40791127 caaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattc 40791050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 421 - 596
Target Start/End: Original strand, 42146262 - 42146439
Alignment:
Q  421 actaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtatt 517  Q
    |||||| ||||| | || |||||||||||| | ||| |||||||||||||  ||||||||||   ||||||||||||||| ||||||| | ||| ||||     
T  42146262 actaaagggataatatggtcattatacattcacaatcaattttgattcaatgtatccaaacaatatcaactcaaaagaatcacttttaattaagcgtatc 42146361  T
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42146362 caaacataa-tcaattcatatctaactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattc 42146439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 426 - 596
Target Start/End: Complemental strand, 2430449 - 2430277
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||| | ||||| |||||||||||||||||||||||||   |||||||| |||||| |||| || | |||||||| |||||    
T  2430449 aaggataatttagtcattacacactcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctattgaagtgtatccaaac 2430350  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  2430349 ataa-tcaattcatgttcaactcacttttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattc 2430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 13253209 - 13253063
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||||||| ||||||   |||||||| |||||| |||||||    ||||||| ||||||||| |||||||| ||||||||||||    
T  13253209 aaaatcaattttgattcaaactattcaaacaacatcaactcataagaatcacttttaaatgagtgtatccaaacataa-tcaattcatattcaactcact 13253111  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  13253110 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattc 13253063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 479 - 596
Target Start/End: Complemental strand, 39988064 - 39987947
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||||||| |||||| |||||||   |||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||    
T  39988064 aacatcaactcataagaatcacttttaaataagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 39987965  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  39987964 ttctatcaaaatcaattc 39987947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 425 - 596
Target Start/End: Complemental strand, 3060376 - 3060204
Alignment:
Q  425 aaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca--actcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    |||||||| |||| ||| || ||||| ||||| ||||||||||||||||||||||||| ||  ||||| |||||| ||||| ||| | || ||| |||||    
T  3060376 aaaggataatttggtcaatacacattcaaaatcaattttgattcaaactatccaaacaacataactcataagaatcactttaagtga-gtatatccaaac 3060278  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| |||||| ||  ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  3060277 ataaattaattcatataaaactcacttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattc 3060204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 433 - 596
Target Start/End: Complemental strand, 41740739 - 41740573
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||| ||||| |||||||||| ||||||||||||||   |||||||| || ||| |||||||   ||||||||||||||||||| |    
T  41740739 gtttggtcattttacattcaaaatcaattttgatttaaactatccaaacaacatcaactcataacaatcacttttaaacaagtgtattcaaacataaacc 41740640  T
Q  530 aattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||  |  ||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  41740639 aattcatctcaaactcacctataatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 41740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 479 - 596
Target Start/End: Complemental strand, 8049148 - 8049031
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||| ||||||| |||||| |||||||   |||||||| |||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||    
T  8049148 aacaacaactcataagaatcacttttaaataagtgtatccaaacataaatcaattaacctcaaactcacttttaaccaaaatcaattctctcaaactcaa 8049049  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  8049048 ttctatcaaaatcaattc 8049031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 449 - 596
Target Start/End: Complemental strand, 7386062 - 7385912
Alignment:
Q  449 tttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactc 545  Q
    |||||||  |||||||||| ||| ||||||||||   |||||||| |||||| |||||||   ||||||||| |||||||||||||||||| |  ||| |    
T  7386062 tttaaaagcaattttgatttaaattatccaaacaacatcaactcataagaatcacttttaaataagtgtatttaaacataaatcaattcacctcaaaccc 7385963  T
Q  546 acttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  7385962 acttttaaccaaaatcaattctctaaaacttaattctatcaaaatcaattc 7385912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 395 - 596
Target Start/End: Original strand, 24045759 - 24045962
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaa 491  Q
    |||| ||||||||| ||||||||  || |||||||||| |||  ||||| ||| || ||||| |||||| ||||||| ||||||||||   ||||| ||     
T  24045759 gaatgagatatttagttttaaatctaattaaaaggataatttagtcattgtacgttcaaaatcaattttaattcaaattatccaaacaacatcaacccat 24045858  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    || ||| | ||| ||| | | | || |||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24045859 aaaaatcattttaagtga-gagcatccaaacataaatcaattcacatcagactcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatc 24045957  T
Q  592 aattc 596  Q
    |||||    
T  24045958 aattc 24045962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 423 - 595
Target Start/End: Original strand, 7714896 - 7715071
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  ||||||||| || ||||| |||||| ||||||||||||||||||   |||||| | |||||| | ||| |    ||||| |  |    
T  7714896 taaaaggataatttagtcattatactttcaaaatcaattttaattcaaactatccaaacaacatcaacttataagaatcaatttcaagtgagtgtgtcaa 7714995  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7714996 aacatatatcaattcatatctaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 423 - 595
Target Start/End: Complemental strand, 16158621 - 16158446
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||| ||| ||||||||||| ||||| ||||| ||||||||||||||  |||||||   |||||| ||  |||||| |||||||  |||||| || ||    
T  16158621 taaaagaatattttgatcattacacattcaaaatcaattttgattcaaatcatccaaagaacatcaattcctaagaatcacttttaaaaaagtgcatcca 16158522  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    || |||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||| ||||  ||||||||||    
T  16158521 aatataaattaattcacatcaaactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatcaatt 16158446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 549
Target Start/End: Complemental strand, 28869688 - 28869530
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactc 489  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| |||||| ||| |  ||||  ||||| | ||||||||||||||||   |||||||    
T  28869688 aagaataagatatttagttttaaatacaattaaaaggataatttggtcattacacactcgaaatctatttt-actcaaactatccaaacaacatcaactc 28869590  T
Q  490 aaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcactt 549  Q
    | |||||| |||||||   |||||||||||||||||||||||| ||||| ||||| ||||    
T  28869589 ataagaatcacttttaagtaagtgtattcaaacataaatcaatccacatccaactaactt 28869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 441 - 595
Target Start/End: Complemental strand, 34107085 - 34106928
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    ||||| || |||||| |||||||||||||| |||| |||||| ||   | ||| ||||||||||||||    | |||||| |||||| ||||||||||||    
T  34107085 attatgcacttaaaagtaattttgattcaacctattcaaacaacattaattcataagaattacttttaaatgaatgtatttaaacattaatcaattcaca 34106986  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |  ||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||    
T  34106985 tctaactcacttttaaccaaaaacaattcttttaaactcaattctatcaaaatcaatt 34106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 592
Target Start/End: Original strand, 27021085 - 27021256
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaact-atccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||||| |||  |||||||||||| ||||| ||||||||||||| || |||||||||   ||||||   |||||| |||||||    ||| ||  ||    
T  27021085 aaaaggataatttcgtcattatacattcaaaatcaattttgattcaatcttatccaaacaacatcaacttctaagaatcacttttaagtgagtatac-ca 27021183  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatca 592  Q
    |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||| || ||||||||    
T  27021184 aacataaatcaattcacatttaactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatca 27021256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 453 - 596
Target Start/End: Complemental strand, 5710511 - 5710366
Alignment:
Q  453 aaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcactt 549  Q
    |||| |||||| ||||||||||||||||||   || ||||| || ||| |||| || ||| | |||| |||||||||| |||||||||   |||||||||    
T  5710511 aaatcaatttttattcaaactatccaaacaatatctactcataaaaatcacttgtaataa-gcgtatccaaacataaagcaattcacaccaaactcactt 5710413  T
Q  550 ttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||| |||||||| |||||| ||||||||||||    
T  5710412 ttaaccaaaatcaattctttcaaactccattctatcaaaatcaattc 5710366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 512 - 595
Target Start/End: Original strand, 7178826 - 7178908
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| |||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||||||||| |||| ||||||    
T  7178826 tgtatccaaacataaatcaatt-acattcaactcacttttagtcaaaattaattctctcaaactcaattctatcaaactcaatt 7178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 518 - 566
Target Start/End: Complemental strand, 2483772 - 2483724
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2483772 caaacataaatcaattcacattcaactcacttttaactaaaatcaattc 2483724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 511 - 595
Target Start/End: Complemental strand, 23914319 - 23914235
Alignment:
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||| ||||| |||||||||||| || ||||||| ||||||  | |||||||||||||||| ||||||||| |||||||||||    
T  23914319 gtgtatccaaacgtaaatcaattcatatccaactcaattttaagtataatcaattctctcaaaatcaattctatcaaaatcaatt 23914235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 35847925 - 35847870
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  35847925 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 35847870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 22811075 - 22811129
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||    
T  22811075 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct 22811129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 24036623 - 24036689
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||||||||| || ||||||||||||||||| | ||||||||||||| ||||| ||||||    
T  24036623 tattcaaacataaatcattttacattcaactcacttttcatcaaaatcaattctatcaaaatcaatt 24036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 583
Target Start/End: Original strand, 20068960 - 20069033
Alignment:
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||| ||||||||||| |||| | | ||||||||||||| ||||||||||||||  |||||||||||||||    
T  20068960 agtgtatccaaacataaataaatttaaactcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 20069033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 539 - 596
Target Start/End: Complemental strand, 2694797 - 2694740
Alignment:
Q  539 tcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||  ||||||||||||    
T  2694797 tcaactcacttttaaccaaaatcaattcaatcaaaatcaattctgacaaaatcaattc 2694740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 2868411 - 2868335
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| ||||||| || |||||||||||||||||||| ||||||||||||  |||| | |||||||| ||||||||||    
T  2868411 caaacttaaatcactttacattcaactcacttttaactaaaatcaattct-acaaaattaattctactaaaatcaatt 2868335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 19784867 - 19784944
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||| || || ||||||||||||||||||||||||||||||||    ||| ||||||| | |||||||||||    
T  19784867 caaacataaaccactttacattcaactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaatt 19784944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 534 - 598
Target Start/End: Original strand, 16843599 - 16843663
Alignment:
Q  534 cacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattcac 598  Q
    ||||| ||| |||||||||||||||||| ||||  |||||||||||| || ||||||||||||||    
T  16843599 cacatccaattcacttttaaccaaaatctattcgttcaaactcaattatatcaaaatcaattcac 16843663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 596
Target Start/End: Complemental strand, 33468055 - 33467972
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| |||||| ||||||||  ||| |||||||||||||||||||||||| |||| ||||| |||||| |   |||||||||||    
T  33468055 gtatccaaacacaaatcaatatacactcaactcacttttaaccaaaatcagttctatcaaaatcaattttgttaaaatcaattc 33467972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 567
Target Start/End: Complemental strand, 4569130 - 4569089
Alignment:
Q  526 aatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  4569130 aatcaattcacactcaactcacttttaatcaaaatcaattct 4569089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 5970005 - 5969956
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| || ||||||||||||||| || ||||||||||||||    
T  5970005 caaacataaatcactttacattcaactcacttatatccaaaatcaattct 5969956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 349 - 391
Target Start/End: Complemental strand, 2430538 - 2430496
Alignment:
Q  349 aattggtgaaccaatacaaatccatttatgattttggataagt 391  Q
    |||| ||||||||||| |||||||||||||||||| |||||||    
T  2430538 aatttgtgaaccaataaaaatccatttatgattttagataagt 2430496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 583
Target Start/End: Original strand, 2861694 - 2861759
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    |||||||||||||||| |||| ||| ||| |||||||  ||||||||| | ||||| |||||||||    
T  2861694 caaacataaatcaatttacatgcaagtcatttttaactcaaatcaattatatcaaaatcaattcta 2861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 29922990 - 29923043
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||| ||||||||||| | |||||||||||||||||| ||  |||||||||||    
T  29922990 tgtatccaaacataaattacttcacattcaactcacttatagtcaaaatcaatt 29923043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 36481744 - 36481813
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaa-ccaaaatcaattctctcaaactcaatt 580  Q
    |||||||||||||||||||| | || ||||||||| |||||| | ||||||||||||   ||||||||||    
T  36481744 tgtattcaaacataaatcaagttactttcaactcaattttaatcaaaaatcaattctacaaaactcaatt 36481813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 580
Target Start/End: Original strand, 15368563 - 15368630
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||||||||||||| ||| | ||||||||| ||| | ||| ||||||||| |||||| ||||||    
T  15368563 tgtattcaaacataaatcacttc-ccttcaactcaatttcagccagaatcaattcactcaaaatcaatt 15368630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 35569375 - 35569186
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||| ||||||||  |||||||||||| ||||| |||||||||||||||||||||||||   ||||| || | |||| |||||||     
T  35569375 ttttaaatacaattaaaatgatagtttagtcattatacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 35569276  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35569275 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattc 35569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 20800450 - 20800261
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| |||||||||| |||  |||||||||||| ||||| ||| |||||||||||||||||||||   ||||| || | |||| |||||||     
T  20800450 ttttaaatacaattaaaaggataatttagtcattatacattcaaaatcaatattgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 20800351  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  20800350 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattc 20800261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 394 - 596
Target Start/End: Original strand, 48510845 - 48511050
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| ||||||||||||||||||| ||  ||||||||||||||||||||| ||| ||||||| ||||||||| || ||||| ||||||   |||| |||    
T  48510845 agaatgagatatttacttttaaatataatcaaaaggatagtttgatcattacacacttaaaatcaattttgatacatactattcaaacaacatcaattca 48510944  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| |||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||    
T  48510945 taagaatcacttttaagcaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaat 48511044  T
Q  591 caattc 596  Q
    ||||||    
T  48511045 caattc 48511050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 31223340 - 31223516
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    ||||||||||||||| |||||| ||||| ||||| |||||| ||||||||||||||||||   |||||||| |||||| |||| || |||||||||| ||    
T  31223340 taaaaggatagtttggtcattacacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctattaaagtgtatcca 31223439  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  31223440 aacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattc 31223516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 414 - 596
Target Start/End: Original strand, 1199784 - 1199969
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||||||||| ||||||||  |||||| || || ||||| |||||||||||||||||||||||||   ||||  || |||||| |||| || ||||    
T  1199784 aaatacaactaaaaagatagtttagtcattacacgttcaaaatcaattttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaa 1199883  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  1199884 gtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 1199969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 394 - 596
Target Start/End: Original strand, 5410577 - 5410781
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| |||||| | ||| ||||| |||| ||||||||||||||||||||   |||| |||    
T  5410577 agaatgagatatttacttttaaatacaattaaaaggatagtttggtcattacatattcaaaatcaattatgattcaaactatccaaacaacatcaagtca 5410676  T
Q  491 aaagaattactttta-gtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
     |||||| ||||||| |||  ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||| |||||| || |||||    
T  5410677 taagaatcacttttaagta--gtgtattcaaacataaatcaatttacatccaactcacttttaatcaaaatcaattctttcaaattcaattatatcaaaa 5410774  T
Q  590 tcaattc 596  Q
    |||||||    
T  5410775 tcaattc 5410781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 426 - 595
Target Start/End: Original strand, 45710018 - 45710189
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||| |||||||||||||||||||    
T  45710018 aaggataatttagtcattagacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtattcaaac 45710117  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  45710118 ataa-tcaattcacatacaactcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatcaatt 45710189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 394 - 595
Target Start/End: Complemental strand, 40229659 - 40229455
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    ||||||||||||||||||| |||||| | ||||||||||||||| |||||| || || ||||| |||||||||||||| ||||||||||   ||||||||    
T  40229659 agaataagatatttactttcaaatactattaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaattatccaaacaacatcaactca 40229560  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| || | ||  ||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||   |||| ||||||||| ||||||    
T  40229559 gaagaatcacctgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattccaacaaaatcaattctatcaaaat 40229460  T
Q  591 caatt 595  Q
    |||||    
T  40229459 caatt 40229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 393 - 595
Target Start/End: Original strand, 13055934 - 13056138
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactc 489  Q
    |||||| ||||||||| ||||||| |||  ||||||| || |||  ||||||  |||| ||||| |||||| ||||||||||||||||||   |||||||    
T  13055934 aagaatgagatatttaattttaaacacagttaaaagggtaatttcgtcattacgcattcaaaatcaatttttattcaaactatccaaacaatatcaactc 13056033  T
Q  490 aaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
    | || ||| ||||||| ||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  13056034 ataaaaatcacttttaataa-gcgtattcaaacataaatcaattcacactcaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaa 13056132  T
Q  590 tcaatt 595  Q
    ||||||    
T  13056133 tcaatt 13056138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 42850388 - 42850203
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| |||||||||| |||| ||| || ||||| ||||| |||||||||  ||| ||||||||||   |||||||| |||||| |||||||   ||    
T  42850388 aaatacaattaaaaggataatttggtcaatacacattcaaaatcaattttgatgtaaaatatccaaacaacatcaactcataagaatcacttttaaggaa 42850289  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  42850288 gtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattc 42850203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 25229973 - 25230148
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||| |||||| ||| | ||||| |||||| ||||||||||||||||||   |||||| | |||||| |||| || |||||||||| ||    
T  25229973 taaaaggataatttggtcattacacactcaaaatcaattttcattcaaactatccaaacaacatcaactaataagaatcacttctattaaagtgtatcca 25230072  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  25230073 aacataa-tcaattcacattcaactcacttttaactaaaatcaattctctcaaactcagttctatcaaaatcaattc 25230148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 401 - 580
Target Start/End: Complemental strand, 4369984 - 4369803
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaat 497  Q
    ||||| || |||||||||||| |||||||||| |||| |||||| ||||||||||| ||||||||||||| |||||||   |||||||||||| ||||||    
T  4369984 gatatataattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaactcataagaat 4369885  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
     |||||||    || |||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  4369884 cacttttaagtgagggtacccaaacataaatcaattcaca-tcaactcacttttaaccaaaatcaattctctcaaaatcaatt 4369803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 413 - 596
Target Start/End: Complemental strand, 43729047 - 43728862
Alignment:
Q  413 taaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaa 509  Q
    ||||||||| ||||||| || |||| |||||  | ||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||   |    
T  43729047 taaatacaaataaaagggtaatttggtcatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaata 43728948  T
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| ||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  43728947 agtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 43728862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 401 - 595
Target Start/End: Complemental strand, 7826536 - 7826339
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaat 497  Q
    ||||| || |||||||||||| ||||||||||  ||| |||||| ||||||||||| ||||||||||||| |||||||||||   |||| ||| ||||||    
T  7826536 gatatctaattttaaatacaattaaaaggataacttggtcattacacatttaaaatcaattttgattcaacctatccaaacaacatcaattcataagaat 7826437  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     |||||||    || |||  |||||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  7826436 cacttttaagtgagggtacccaaacataaatcaattcacatcaagctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaatt 7826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 423 - 588
Target Start/End: Original strand, 12468179 - 12468346
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca--tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||| |||| ||||| |||||| ||||| |||||||||||||||||||||||||  |||||||| || ||| |||||||  ||||||||| |||    
T  12468179 taaaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaaatcaactcataaaaatcacttttaaaaaagtgtatccaa 12468278  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaa 588  Q
    | ||||||||||| ||||  ||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  12468279 atataaatcaatttacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaa 12468346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 426 - 596
Target Start/End: Original strand, 6464577 - 6464749
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||| |||||||||||||  ||||    
T  6464577 aaggataatttagtcattagacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttctagtaaagtgtataaaaac 6464676  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| |||||||||||| |||||||||||||||||||| || || ||||||||||||| || ||||||||||||    
T  6464677 ataa-tcaattcacattaaactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattc 6464749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 426 - 596
Target Start/End: Original strand, 10470559 - 10470731
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  ||| |||||||| ||||| |||||| ||||||||||||||||||   |||||||| |||||| |||| |  ||| |||||| |||||    
T  10470559 aaggataatttagtcactatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacttctgttaacgtgtatccaaac 10470658  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  10470659 ataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 10470731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 595
Target Start/End: Complemental strand, 11023498 - 11023315
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| ||||||| ||  ||| ||||||  |||||||||| ||||||||||||||||| |||||||   |||||||  || ||||||||||| |  |    
T  11023498 aaatacaattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattga 11023399  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     ||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11023398 atgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 11023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 393 - 596
Target Start/End: Complemental strand, 50977529 - 50977324
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactc 489  Q
    |||||| ||||||||| ||||||| |||  ||||||| || |||  |||||| ||||| ||||| |||||| ||||||||||||||||||   || ||||    
T  50977529 aagaatgagatatttaattttaaacacagttaaaagggtaatttagtcattacacattcaaaatcaatttttattcaaactatccaaacaatatctactc 50977430  T
Q  490 aaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaa 589  Q
    | || ||| |||| || ||| | |||| |||||||||| |||||||||   ||||||||||||||||||||||||||| |||||||| |||||| |||||    
T  50977429 ataaaaatcacttgtaataa-gcgtatccaaacataaaacaattcacaccaaactcacttttaaccaaaatcaattctttcaaactccattctatcaaaa 50977331  T
Q  590 tcaattc 596  Q
    |||||||    
T  50977330 tcaattc 50977324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 434 - 595
Target Start/End: Original strand, 47123363 - 47123527
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||||||||| |||||  |||||||||| ||  |||||||||| ||   ||| | |||||| |||||||   |||||||| |||||| ||||||    
T  47123363 tttgataattatacatctaaaagcaattttgatttaatgtatccaaacaacaccaacttataagaatcacttttaacgaagtgtatccaaacaaaaatca 47123462  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  47123463 attcacatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 47123527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 416 - 596
Target Start/End: Original strand, 6166069 - 6166251
Alignment:
Q  416 atacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagt 512  Q
    |||||| ||||||| ||  ||| ||||||  |||||||||| ||||||||||||||||| |||||||   |||||||  |||||| |||||||    |||    
T  6166069 atacaattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaacatcaactcctaagaatcacttttaaatgagt 6166168  T
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||| |||||||| ||  ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||    
T  6166169 gtatccaaacataa-tcaattcagatcaaactcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattc 6166251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 507 - 596
Target Start/End: Complemental strand, 49243055 - 49242966
Alignment:
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||    
T  49243055 taaaatgtattcaaacataaatcaattcacatccaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattc 49242966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 15884285 - 15884369
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  15884285 tgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaattc 15884369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 405 - 581
Target Start/End: Original strand, 36205139 - 36205318
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattact 501  Q
    |||||||| |||||||| ||||||| || |||| |||||| ||||| ||||| |||||||||||||||||||||   |||||  ||||  |||||| |||    
T  36205139 tttactttaaaatacaattaaaaggttaatttggtcattaaacattcaaaatcaattttgattcaaactatccaagcaacattcactcgtaagaatcact 36205238  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattc 581  Q
    ||||   |||| ||| ||| || ||| ||||||| ||  ||| ||||||||| |||||||||||||||||||||||||||    
T  36205239 tttaaataagtttatccaatcaaaaaccaattcatatctaacccacttttaatcaaaatcaattctctcaaactcaattc 36205318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 461 - 580
Target Start/End: Original strand, 11561826 - 11561948
Alignment:
Q  461 tttgattcaaactatccaaac---atcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaa 557  Q
    ||||| ||||||||||||||    || |||||| |||||| |||||||  | ||| |||||||| |||||||||||||||||||||||||||||||||||    
T  11561826 tttgagtcaaactatccaaattaaatgaactcataagaatcacttttaaaatagtatattcaaatataaatcaattcacattcaactcacttttaaccaa 11561925  T
Q  558 aatcaattctctcaaactcaatt 580  Q
    ||| |||||| ||||||||||||    
T  11561926 aattaattctttcaaactcaatt 11561948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 412 - 595
Target Start/End: Original strand, 12247375 - 12247560
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||||||| ||||||| || |||| |||||  |  || ||||| |||||||||||||| | ||||||||   |||||||| || ||| |||||||       
T  12247375 ttaaatacaattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaattctccaaacaacatcaactcataaaaatcacttttaaac 12247474  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| ||||||||| | |||| |||| ||||||||||||||||| |||||||||||| |||||||||||||  ||||||||||    
T  12247475 aagtgtatccaaacataatt-aatttacatccaactcacttttaaccagaatcaattctcttaaactcaattctattaaaatcaatt 12247560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 457 - 595
Target Start/End: Original strand, 34718451 - 34718592
Alignment:
Q  457 taattttgattcaaactatccaaacatc---aactcaaaagaattacttttagta-aagtgtattcaaacataaatcaattcacattcaactcactttta 552  Q
    ||||||| ||||||| |||||||||| |   || ||| |||||| |||||| ||| ||||||||||||||||||||||||| | ||  ||||||||||||    
T  34718451 taattttaattcaaagtatccaaacaactataattcataagaatcactttt-gtacaagtgtattcaaacataaatcaatttatatcaaactcactttta 34718549  T
Q  553 accaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| |||| ||||||||||||||||| |||||||||||    
T  34718550 accaaaattaattatctcaaactcaattctatcaaaatcaatt 34718592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 552
Target Start/End: Complemental strand, 11051502 - 11051339
Alignment:
Q  391 tcaagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatc--aact 488  Q
    |||||||| ||||||||  ||||||||| || |||||||||| |||| |||||| ||||| ||||| |||||| |||||||||||||||||| |  ||||    
T  11051502 tcaagaatgagatattttgttttaaatataattaaaaggataatttggtcattacacattcaaaatcaatttttattcaaactatccaaacaacataact 11051403  T
Q  489 caaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcactttta 552  Q
    |  |||||  | |||||     ||||||||||||||||||||||||||||  ||||||||||||    
T  11051402 cttaagaaccatttttaagtgtgtgtattcaaacataaatcaattcacatcaaactcactttta 11051339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 441 - 596
Target Start/End: Original strand, 50406114 - 50406272
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    |||||||||||||||  |||||||||||||  |||||||||| ||||   | | |||||| | |||||   ||||| || |||||| |||||||||||||    
T  50406114 attatacatttaaaaacaattttgattcaatgtatccaaacaacaacaacttataagaatcatttttaacgaagtgcatccaaacaaaaatcaattcaca 50406213  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |  ||||||||||||| ||||||||| ||| |||||||||||| || ||||||||||||    
T  50406214 tctaactcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatcaattc 50406272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 4347033 - 4347114
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||    
T  4347033 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattct-acaaaatcaattctaccaaaatcaatt 4347114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 479 - 596
Target Start/End: Complemental strand, 27801753 - 27801636
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||| ||| | ||||||||||||    |||| || |||||||||||||||| ||||  ||||||||||||| ||||||||||||||| ||| ||||    
T  27801753 aacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaactcacttttaatcaaaatcaattctcttaaaatcaa 27801654  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  27801653 ttctatcaaaatcaattc 27801636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 449 - 595
Target Start/End: Original strand, 25061218 - 25061367
Alignment:
Q  449 tttaaaattaattttgattcaaactatccaaacatcaac---tcaaaagaattactttta-gtaaagtgtattcaaacataaatcaattcacattcaact 544  Q
    |||||||| |||||||||||||| ||||||||||||| |   | | |||||| ||||||| || ||| |||| |||||||||||||||| |  |||||||    
T  25061218 tttaaaatcaattttgattcaaattatccaaacatcatcaattgataagaatcacttttatgttaag-gtatccaaacataaatcaatttatgttcaact 25061316  T
Q  545 cacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||||||   |||| |||||| || |||||||||||    
T  25061317 cacttttaaccaaaatcaattcaaccaaaatcaattttaacaaaatcaatt 25061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 479 - 596
Target Start/End: Original strand, 26058266 - 26058383
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||| ||| | ||||||||||||    |||| || |||||||||||||||| ||||  || |||||||||| ||||||||||||||| ||| ||||    
T  26058266 aacatcaattcatatgaattacttttaaatgagtgcatccaaacataaatcaatttacatctaattcacttttaatcaaaatcaattctcttaaaatcaa 26058365  T
Q  579 ttctaccaaaatcaattc 596  Q
    ||||| ||||||||||||    
T  26058366 ttctatcaaaatcaattc 26058383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 412 - 583
Target Start/End: Original strand, 35536027 - 35536200
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||||||| ||||||| || |||| |||||  |  || ||||| |||||||||||||| ||||||||||   |||||||| |||||| |||||||       
T  35536027 ttaaatacaattaaaagggtaatttggtcatttaatgttcaaaatcaattttgattcaaattatccaaacaacatcaactcataagaatcacttttaaac 35536126  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
     |||||||  ||||||||  |||||||| |  || |||||||||| |||||| ||||||||||||||||||||||    
T  35536127 gagtgtatctaaacataac-caattcacgtcaaagtcacttttaatcaaaattaattctctcaaactcaattcta 35536200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 434 - 580
Target Start/End: Complemental strand, 23628854 - 23628706
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||||||| || |||| |||||||||||||||| | ||||||| ||   | | | |||||| | ||||||   | ||||| |||||||||||||    
T  23628854 tttgataattatactttcaaaagtaattttgattcaaaccacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatca 23628755  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||| ||||||||||||||||||  ||||||||||| ||||||||||||||    
T  23628754 att-acattcaactcacttttagtcaaaatcaattatctcaaactcaatt 23628706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 519 - 582
Target Start/End: Original strand, 47085898 - 47085961
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||||||    
T  47085898 aaacataaatcaattcacattcaactcacttttaattaaaatcaattctatcaaaatcaattct 47085961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 596
Target Start/End: Original strand, 40352455 - 40352532
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||| | |||| ||||||||| ||||||||||||    
T  40352455 caaacataaatcactttacattaaactcacttttaaccaaaatcaattc-cacaaaatcaattctatcaaaatcaattc 40352532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 515 - 595
Target Start/End: Original strand, 41986 - 42066
Alignment:
Q  515 attcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||||||  |||| |||||| || |||||||||||    
T  41986 attcaaacataaatcaattcacgttcaactcaccttttactaaaatcaattctaacaaaatcaattttatcaaaatcaatt 42066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 536 - 596
Target Start/End: Original strand, 43134532 - 43134592
Alignment:
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| | |||| |||||    
T  43134532 cattcaactcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaattc 43134592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 29441271 - 29441326
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  29441271 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 29441326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 13344837 - 13344913
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||  |||| ||||||| | |||||||||||    
T  13344837 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattct-acaaaatcaattcaatcaaaatcaatt 13344913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 437 - 594
Target Start/End: Original strand, 13931603 - 13931762
Alignment:
Q  437 gatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaatt 533  Q
    |||||||| | ||| ||||| |||||||||||||||||||||||||   ||||||   |||||| |  ||||    ||| ||| ||||||||| ||||||    
T  13931603 gatcattacatattcaaaatcaattttgattcaaactatccaaacaacatcaacttgtaagaatcatgtttaagtgagtatatccaaacataa-tcaatt 13931701  T
Q  534 cacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaat 594  Q
    |||||  |||||| |||||| ||||||||||| |   ||||||||||||| ||||||||||    
T  13931702 cacatcaaactcatttttaaacaaaatcaatttttggaaactcaattctatcaaaatcaat 13931762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 516 - 565
Target Start/End: Original strand, 32365141 - 32365190
Alignment:
Q  516 ttcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  32365141 ttcaaacataaatcaatttacattcaactcacttttgactaaaatcaatt 32365190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 29759710 - 29759762
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| ||||||||||||| || |||||||||||||||||||||| ||||||||    
T  29759710 gtatccaaacataaatcattttacattcaactcacttttaaccataatcaatt 29759762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 565
Target Start/End: Complemental strand, 43730111 - 43730059
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| |||||| ||||||||| ||| |||||||||||||||||||||||||||    
T  43730111 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaatt 43730059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 47978419 - 47978359
Alignment:
Q  522 cataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| |||||| | ||||||    
T  47978419 cataaatcactttacattcaactcacttttacccaaaatcaattcactcaaaatgaattct 47978359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 477 - 568
Target Start/End: Complemental strand, 291820 - 291729
Alignment:
Q  477 caaacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 568  Q
    |||||| ||||||| || ||| |||||||   |||||||| |||||||||| |||||||  |  ||||||||||||| ||||||||||||||    
T  291820 caaacaacaactcataacaatcacttttaaacaagtgtatccaaacataaaccaattcatctcaaactcacttttaatcaaaatcaattctc 291729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 596
Target Start/End: Original strand, 9447534 - 9447673
Alignment:
Q  458 aattttgattcaaactatcca---aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaac 554  Q
    |||||| ||||||||||||||   ||||||||||| ||||||| |||||||    ||| |||  |||||| |||| ||||||||  ||||||||||||||    
T  9447534 aattttaattcaaactatccaaacaacatcaactcgaaagaatcacttttaaatgagtatatctaaacat-aatccattcacatcaaactcacttttaac 9447632  T
Q  555 caaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | ||| || |||||||||| |||||| ||  |||||||||||    
T  9447633 c-aaaccatttctctcaaattcaattttattaaaatcaattc 9447673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 552
Target Start/End: Original strand, 40821791 - 40821922
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  |||||  ||||| ||| | |||||||||||||| ||||||||   |||||||  | |||||| |||| |  |||||||||| |     
T  40821791 taaaaggataatttagtcattgcacattcaaactcaattttgattcaaattatccaaataacatcaacaaataagaatcacttatgttaaagtgtatcct 40821890  T
Q  520 aacataaatcaattcacattcaactcactttta 552  Q
    ||||||| ||||||||||||||||||| |||||    
T  40821891 aacataa-tcaattcacattcaactcattttta 40821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 5930824 - 5930873
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| || |||||||| | ||||||||||||||||||||||    
T  5930824 caaacataaatcactttacattcaatttacttttaaccaaaatcaattct 5930873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 560
Target Start/End: Complemental strand, 7335944 - 7335899
Alignment:
Q  515 attcaaacataaatcaattcacattcaactcacttttaaccaaaat 560  Q
    |||||||||||||||| || |||||||||||||||||||| |||||    
T  7335944 attcaaacataaatcactttacattcaactcacttttaactaaaat 7335899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 566
Target Start/End: Complemental strand, 8746183 - 8746128
Alignment:
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    ||||||||||| ||||||||||| || || ||| ||||||||| ||||||||||||    
T  8746183 gtgtattcaaatataaatcaatttacttttaacccacttttaatcaaaatcaattc 8746128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 567
Target Start/End: Original strand, 40709234 - 40709288
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||| |||||||||||||||| ||| |||||||||| |||| |||||||||||||    
T  40709234 tgtatccaaacataaatcaatt-acactcaactcactattaatcaaaatcaattct 40709288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 550
Target Start/End: Complemental strand, 441630 - 441592
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttt 550  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  441630 tgtattcaaacataaatcatttcacattcaaatcacttt 441592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 583
Target Start/End: Original strand, 43134454 - 43134488
Alignment:
Q  549 tttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||||||||||||| |||||||||||||||||    
T  43134454 tttaaccaaaatcaattatctcaaactcaattcta 43134488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 580
Target Start/End: Original strand, 49178235 - 49178301
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||||||||||||||||||| | |||| | ||| ||||||| |||||||||||  ||||| ||||||    
T  49178235 tattcaaacataaatcaatttatattcgagtcatttttaacaaaaatcaattcaatcaaaatcaatt 49178301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 580
Target Start/End: Original strand, 15576519 - 15576580
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    ||||||||| ||||| | ||  |||||||||||||  |||||||||||||| ||||||||||    
T  15576519 aaacataaaacaattaatatctaactcacttttaattaaaatcaattctcttaaactcaatt 15576580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 46581326 - 46581285
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||| |||| ||||||||||||||| ||||||||||    
T  46581326 attatacattcaaaaataattttgattcaaattatccaaaca 46581285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 518 - 582
Target Start/End: Original strand, 16556299 - 16556362
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||| ||||  | ||| |||||||||||||||||||||| | ||||| ||||||||    
T  16556299 caaacataaatcacttcatct-caattcacttttaaccaaaatcaattatgtcaaattcaattct 16556362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 596
Target Start/End: Original strand, 30557624 - 30557675
Alignment:
Q  544 tcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||  || | ||||||||| ||||||||||||    
T  30557624 tcacttttaaccaaaatcaattct-acagaatcaattctatcaaaatcaattc 30557675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 41571163 - 41571207
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatca 485  Q
    |||||| ||| ||||||||||| ||||||||||||| ||||||||    
T  41571163 attatatattcaaaattaatttcgattcaaactatctaaacatca 41571207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 565
Target Start/End: Complemental strand, 47981862 - 47981810
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| ||||||||||||| || | |||||||||| ||||||||||||| ||||    
T  47981862 gtatccaaacataaatcactttaaattcaactcaattttaaccaaaattaatt 47981810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 552
Target Start/End: Complemental strand, 50751296 - 50751256
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcactttta 552  Q
    ||||||||||||||||||| || ||||| ||||||||||||    
T  50751296 tgtattcaaacataaatcattttacatttaactcactttta 50751256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 4e-58; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 394 - 595
Target Start/End: Complemental strand, 28425660 - 28425456
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactca 490  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||| || || ||||| |||||||||||||||||||||||||   ||||||||    
T  28425660 agaataagatatttacttttaaatacaattaaaaggatagtttggtcattacacgttcaaaatcaattttgattcaaactatccaaacaacgtcaactca 28425561  T
Q  491 aaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaat 590  Q
     |||||| |||| ||  ||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||  |||| ||||||||| ||||||    
T  28425560 taagaatcacttgtaagaaagtgtatccaaacataaatcaattcacctcaaactcacttttaaccaaaatcaattctaacaaaatcaattctatcaaaat 28425461  T
Q  591 caatt 595  Q
    |||||    
T  28425460 caatt 28425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 22936961 - 22936776
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||||||||||||||||||  |||||||| ||| ||||  || ||||||||||||||||||||||   ||||  || |||||| |||| || ||||    
T  22936961 aaatacaactaaaaggatagtttagtcattatatattcaaaaccaaatttgattcaaactatccaaacaacatcaatccacaagaatcacttctaataaa 22936862  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  22936861 gtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattc 22936776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 402 - 596
Target Start/End: Original strand, 3467462 - 3467659
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaa---acatcaactcaaaagaatt 498  Q
    ||||||| || ||| || || ||||||||||||||| |||||  | ||||||||| ||||||||||||||||||||||   ||||||| ||| ||||||     
T  3467462 atatttatttctaattataattaaaaggatagtttggtcattccatatttaaaatcaattttgattcaaactatccaaccaacatcaattcataagaatc 3467561  T
Q  499 acttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||   || | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3467562 acttttaaataaatatatccaaacagaaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 3467659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 412 - 582
Target Start/End: Original strand, 40742063 - 40742236
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||||||| |||||||||| ||||||||||| ||||| ||||| || ||| |||||||  |||||||||   |||||||| |||||| | ||||| ||    
T  40742063 ttaaatacaattaaaaggataatttgatcattacacattcaaaatcaagtttcattcaaatcatccaaacaatatcaactcataagaatcaattttatta 40742162  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40742163 aagtgtatccaaacataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 410 - 570
Target Start/End: Original strand, 43550828 - 43550991
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  || ||| ||||| ||||| |||||||||||||| ||||||||||   ||||| || |||||| |||||||     
T  43550828 ttttaaatacaattaaaaggatagtttagtctttacacattcaaaatcaattttgattcaaattatccaaacaacatcaacccacaagaatcacttttaa 43550927  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctc 570  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43550928 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattttctc 43550991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 44926778 - 44926966
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttag 506  Q
    |||||| ||||| || || |||| |||| ||||| |||||| |||||||||||||||||||||||||||||   |||||||||| |||||| |||||||     
T  44926778 ttttaattacaattacaaagataatttggtcattttacattcaaaattaattttgattcaaactatccaaataacatcaactcataagaatcacttttaa 44926877  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
      |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  44926878 acaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactcaattc 44926966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 447 - 596
Target Start/End: Complemental strand, 41289193 - 41289041
Alignment:
Q  447 catttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaac 543  Q
    |||| ||||| |||||||||||||||||||||||||   |||||  | |||||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  41289193 cattcaaaatcaattttgattcaaactatccaaacaacatcaacctataagaatcacttttagtaaagtgtatccaaacataaatcaattcacaatcaac 41289094  T
Q  544 tcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||  |||||||||||||||||||||||||||  ||||||||||||    
T  41289093 tcacttttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattc 41289041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 410 - 595
Target Start/End: Complemental strand, 440361 - 440173
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatc---aactcaaaagaattacttttag 506  Q
    ||||||||||||| |||||||||  ||| |||||||||||| ||||| | ||||||||||| ||||||||||| |   |||||| |||||| | |||||     
T  440361 ttttaaatacaacaaaaaggataagttggtcattatacattcaaaatcagttttgattcaatctatccaaacaacgttaactcataagaatcatttttaa 440262  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
       | ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  440261 ctgaatgtatccaaacataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatcaatt 440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 413 - 596
Target Start/End: Complemental strand, 25698128 - 25697943
Alignment:
Q  413 taaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaa 509  Q
    ||||||||| ||||||| || |||| | |||  | ||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||   |    
T  25698128 taaatacaaataaaagggtaatttggttatttaatattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaata 25698029  T
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| ||| ||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  25698028 agtttatccaaacataa-tcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 25697943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 434 - 596
Target Start/End: Complemental strand, 33627182 - 33627017
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||| |||||| |||||  |||||||||||||||||||||||| ||   ||||| |||||| |||||||||||||||||| |||||||||||||    
T  33627182 tttgataattttacattcaaaatcgattttgattcaaactatccaaacaacattaactcataagaatcacttttagtaaagtgtatccaaacataaatca 33627083  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||  || ||||||| ||||||  |||||||||||| ||||||||||||||| ||||||||||||    
T  33627082 attcttatccaactcagttttaaataaaatcaattctttcaaactcaattctatcaaaatcaattc 33627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 396 - 595
Target Start/End: Complemental strand, 6399294 - 6399092
Alignment:
Q  396 aataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaa 492  Q
    |||| |||||||| ||| ||| |||| ||||| |||| |||| |||||  ||||| ||||| |||||||||| ||| ||||||||||   |||||||| |    
T  6399294 aatatgatatttagtttcaaaaacaattaaaaagataatttggtcattgcacattcaaaatcaattttgattaaaattatccaaacaacatcaactcata 6399195  T
Q  493 agaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatca 592  Q
    ||||| |||||||    |||||||  ||||||||||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||| |||||    
T  6399194 agaatcacttttaagtgagtgtatcgaaacataaatcaattcacatcaaactcacttttaaccataatcaattctatcaaactcaattctaccagaatca 6399095  T
Q  593 att 595  Q
    |||    
T  6399094 att 6399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 416 - 595
Target Start/End: Original strand, 8124914 - 8125095
Alignment:
Q  416 atacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagt 512  Q
    |||||| ||||||| ||  ||| ||||||| |||||||||| |||||||||||||||||||||||||   |||||||  |||||| |||||||    |||    
T  8124914 atacaattaaaagggtaagttggtcattatccatttaaaatcaattttgattcaaactatccaaacaacttcaactcctaagaatcacttttaaatgagt 8125013  T
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||    
T  8125014 gtatccaaacataa-tcaattcacatcaaactcacttctaaccaaaatcaattctctcaaactcgattcaaccaaaatcaatt 8125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 3097336 - 3097189
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||    ||| ||| |||||||||||||||||| ||  ||||||||    
T  3097336 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaagtgagtatatccaaacataaatcaattcatatcaaactcact 3097237  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||    
T  3097236 tttaaccaaaatcaattctctcaaactcaattctatcaaaattaattc 3097189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 596
Target Start/End: Complemental strand, 40742473 - 40742278
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaatt 498  Q
    ||||||| ||||||| |||| ||||||| || |||| ||| || ||||||||||| |||||||||| ||| |||||||||||||   ||||| ||||||     
T  40742473 atatttaattttaaacacaattaaaagggtaatttggtcactacacatttaaaatcaattttgatttaaaatatccaaacatcatcaactcataagaatc 40742374  T
Q  499 acttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||  | ||  |||||| |||||||||||||||||| ||  |||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||    
T  40742373 acttacatta--gtgtatccaaacataaatcaattcagatcaaactcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaattc 40742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 441 - 596
Target Start/End: Complemental strand, 36121674 - 36121528
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattc 540  Q
    |||| ||||| |||||||||||||||||||||||| ||||||| |        |||| |||| ||||||||||||| ||||||||| || ||||||||||    
T  36121674 attagacattcaaaattaattttgattcaaactattcaaacatga--------gaatcacttatagtaaagtgtatccaaacataa-tctattcacattc 36121584  T
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||    
T  36121583 aactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattc 36121528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 452 - 596
Target Start/End: Original strand, 27649725 - 27649871
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||    |||||||  |||||||  |||||||| || ||| |||||    
T  27649725 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaatgagtgtatctaaacatat-tcaattcatatccaaatcact 27649823  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27649824 tttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattc 27649871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 424 - 596
Target Start/End: Complemental strand, 4941939 - 4941764
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    ||||| ||| |||| ||||| |||||| ||||| |||||| ||||||| ||| ||||||   |||||||| ||||||  ||||||   || | ||| |||    
T  4941939 aaaagaataatttggtcattttacattcaaaatcaattttaattcaaattattcaaacaacatcaactcataagaatcgcttttaaataattttatccaa 4941840  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||| |  ||||||||||||| |||||||||||||||||||||||||| || || |||||||||    
T  4941839 acataaatcaattcacctcaaactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattc 4941764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 15206738 - 15206822
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||| |||||| |||||    
T  15206738 tgtatccaaacataaatcaattcacattcaactcacttttacccaaaatcaattttgtcaaactcaattctatcaaaattaattc 15206822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 521 - 596
Target Start/End: Complemental strand, 30759363 - 30759288
Alignment:
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  30759363 acataaatcaattcacatccaactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattc 30759288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 596
Target Start/End: Original strand, 38114485 - 38114570
Alignment:
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  38114485 agtgtatccaaacataa-tcaattcacatccaacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattc 38114570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 36114170 - 36114024
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||| ||||||||||   |||||||| |||||| |||||||    ||||||| |||||||||  ||||  ||||  |||| |||    
T  36114170 aaaatcaattttgattcaaattatccaaacaatatcaactcataagaatcacttttaaacgagtgtatccaaacataac-caatctacatcaaacttact 36114072  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  36114071 tttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 36114024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 460 - 596
Target Start/End: Complemental strand, 42143486 - 42143347
Alignment:
Q  460 ttttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaacca 556  Q
    ||||| |||||| ||||||||||   |||||||| |||||| |||||||   |||| ||| ||||||||||||||||||| |  |||||||||||||| |    
T  42143486 ttttgtttcaaattatccaaacaacgtcaactcataagaatcacttttaaataagtttatccaaacataaatcaattcacctcaaactcacttttaacta 42143387  T
Q  557 aaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||| || || |||||||||    
T  42143386 aaatcaattttctcaaactcaattatatcataatcaattc 42143347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 484 - 596
Target Start/End: Original strand, 26243138 - 26243250
Alignment:
Q  484 caactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||| |||||| |||||||   || | ||| |||||||||||||||||| ||  |||||||||||||| |||||||||||||| |||||||||||||    
T  26243138 caactcataagaatcacttttaaacaattatatccaaacataaatcaattcatatcaaactcacttttaacaaaaatcaattctcttaaactcaattcta 26243237  T
Q  584 ccaaaatcaattc 596  Q
     ||||||||||||    
T  26243238 tcaaaatcaattc 26243250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 414 - 596
Target Start/End: Complemental strand, 38152342 - 38152158
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattactttta-gtaa 509  Q
    |||||||| |||| ||||| |||| |||||| || || ||||| |||||||||| ||| |||||||||   ||||||||| |||||| | ||||| ||||    
T  38152342 aaatacaattaaagggatactttggtcattacacgttcaaaatcaattttgatttaaagtatccaaaccacatcaactcataagaatcatttttaagtaa 38152243  T
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | | | | |||||||||||||||| ||||  |||||||||| ||| |||||||||| ||||||||| ||||||| ||||||||||||    
T  38152242 a-tatttccaaacataaatcaatttacatcaaactcacttt-aactaaaatcaattttctcaaacttaattctatcaaaatcaattc 38152158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 509 - 596
Target Start/End: Original strand, 25497731 - 25497817
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||| || ||||||||||||    
T  25497731 aagtgtatccaaacataa-tcaattcacatccaactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaattc 25497817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 459 - 596
Target Start/End: Complemental strand, 24897710 - 24897571
Alignment:
Q  459 attttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaacc 555  Q
    ||||||||||||| ||||||||||   |||||||| |||||| | |||||   || ||||| ||||||||| ||| |||| || ||||||||||||||||    
T  24897710 attttgattcaaattatccaaacaacatcaactcataagaatcaattttaaataaatgtatccaaacataattca-ttcatatccaactcacttttaacc 24897612  T
Q  556 aaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||  |||||||||| || ||||||||||||    
T  24897611 aaaatcaattctcataaactcaattttatcaaaatcaattc 24897571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 31246381 - 31246299
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||||||||  |||||||||||    
T  31246381 gtatccaaacataaatcaattcacattcaactcacttttaacaaaaatcaattctaacaaaatcaattctgtcaaaatcaatt 31246299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 439 - 582
Target Start/End: Original strand, 42148971 - 42149117
Alignment:
Q  439 tcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattca 535  Q
    ||||| |||||| ||||| |||||||||||||| |||| |||||   |||||||| | |||| |||||||   |||| ||| ||||||||||||||||||    
T  42148971 tcattttacattcaaaatcaattttgattcaaattatctaaacaacatcaactcatacgaatcacttttaaataagtctatccaaacataaatcaattca 42149070  T
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    | |  ||||||||||||||||||||||||| | ||| | ||||||||    
T  42149071 cctcaaactcacttttaaccaaaatcaattatatcagaatcaattct 42149117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 595
Target Start/End: Complemental strand, 30081815 - 30081635
Alignment:
Q  417 tacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtg 513  Q
    ||||| |||||||||| |||| |||||| |||| |||||| ||||||||  |||||||||||||||   ||| | || ||||||| |||||     ||      
T  30081815 tacaattaaaaggataatttggtcattacacatctaaaatcaattttgaaacaaactatccaaacaacatcagcccataagaattgcttttgtgtcagct 30081716  T
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||| ||||||||||||||||||| || |||||||||||||| |||||||||| || |||| |||||| || |||||||||||    
T  30081715 tatccaaacataaatcaattcacttt-aactcacttttaactaaaatcaattttcacaaaatcaattttatcaaaatcaatt 30081635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 26243012 - 26243100
Alignment:
Q  394 agaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||| |||||||||||||||||||||| |||||| |||||||| |  |||  |||| ||||| |||||||||||||||||||||||||    
T  26243012 agaatgagatatttacttttaaatacaattaaaagaatagtttggtttttacgcattcaaaatcaattttgattcaaactatccaaaca 26243100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 519 - 596
Target Start/End: Original strand, 35615758 - 35615835
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||| |||||||||||||| |  |||||||||||  | ||||||||||||||| ||||||||||||    
T  35615758 aaacataaatcaattcccattcaactcacttctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaattc 35615835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 3465478 - 3465423
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  3465478 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 3465423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 441 - 595
Target Start/End: Complemental strand, 3619209 - 3619053
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||   | | | |||||| ||||| |    | ||||| |||||| |||||||||  ||    
T  3619209 attatacatttaaaatcaattttgattcaaactatccaaacaacatacattgataagaatcactttcatattaatgtatccaaacacaaatcaatt-tca 3619111  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     ||||||||||||| | || |||||||||  ||||| ||||||||| |||||||||||    
T  3619110 ctcaactcacttttgatcagaatcaattcattcaaaatcaattctatcaaaatcaatt 3619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 519 - 565
Target Start/End: Complemental strand, 10552969 - 10552923
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  10552969 aaacataaatcaatttacattcaactcacttttaaccaaaatcaatt 10552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 506
Target Start/End: Original strand, 41981086 - 41981193
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaatt 498  Q
    ||||||| || ||| ||||| ||||| ||||||||| |||||  | ||||||||| |||||||||||||| ||||||   |||||||||||| ||||||     
T  41981086 atatttatttctaattacaattaaaaagatagtttggtcattccatatttaaaatcaattttgattcaaagtatccaaacaacatcaactcataagaatc 41981185  T
Q  499 acttttag 506  Q
    ||||||||    
T  41981186 acttttag 41981193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 19649229 - 19649281
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||    
T  19649229 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaatt 19649281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 544 - 596
Target Start/End: Complemental strand, 30085674 - 30085622
Alignment:
Q  544 tcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattc 30085622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Original strand, 26490976 - 26491043
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||| ||||||    
T  26490976 gtatccaaacacaaatcaatttacactcaactcacttttaaccaaaatcaattctaccaaaatcaatt 26491043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 518 - 596
Target Start/End: Original strand, 36779439 - 36779516
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| | || ||||||||||||||||||| |||||||||||||  |||| |||||| || ||||||||||||    
T  36779439 caaacataaattactttacattcaactcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatcaattc 36779516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 518 - 580
Target Start/End: Original strand, 42600969 - 42601031
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||||||| | ||| ||||||    
T  42600969 caaaaataaatcaattcacattcaactcactttgaacaaaaatcaattctgttaaaatcaatt 42601031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 514 - 595
Target Start/End: Complemental strand, 40792268 - 40792188
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| |||||||||||  |||||||||||||||||| ||||||||||| | ||||| |||||| ||  ||||||||||    
T  40792268 tattcaaatataaatcaattg-cattcaactcacttttaatcaaaatcaattatatcaaaatcaattttattaaaatcaatt 40792188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 2071628 - 2071565
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||| |||||||| ||||||||||||||||||  ||||||||||||| ||||| ||||||||    
T  2071628 caaacatgaatcaatt-acattcaactcacttttagtcaaaatcaattctgtcaaaatcaattct 2071565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 583
Target Start/End: Original strand, 23018137 - 23018209
Alignment:
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    |||||| ||||||||||| |||| | | ||||||||||||| | ||||||||||||  |||||||||||||||    
T  23018137 gtgtatccaaacataaataaatttatactcaactcacttttgatcaaaatcaattcgatcaaactcaattcta 23018209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 26125504 - 26125634
Alignment:
Q  405 tttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattact 501  Q
    |||| |||||||||||| ||||| |||| |||  |||||| ||||| ||||| |||||||||| ||||  |||||||   ||||||||| |||||| | |    
T  26125504 tttaattttaaatacaattaaaaagatattttcgtcattacacattcaaaatcaattttgatttaaaccgtccaaacattatcaactcataagaatcatt 26125603  T
Q  502 tttagtaaagtgtattcaaacataaatcaat 532  Q
    ||||    ||||||| |||||||||||||||    
T  26125604 tttacattagtgtatccaaacataaatcaat 26125634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 555 - 595
Target Start/End: Original strand, 29023308 - 29023348
Alignment:
Q  555 caaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  29023308 caaaatcaattctctcaaactcaattctatcaaaatcaatt 29023348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 441 - 485
Target Start/End: Complemental strand, 37458444 - 37458400
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaacatca 485  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  37458444 attatacattcaaaatcaattttgattcaaactatccaaacatca 37458400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 509 - 596
Target Start/End: Original strand, 11126555 - 11126642
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||| |||||||||||||||  |   ||||||  |||||||| ||||||||||||||| || | ||||||| ||||||||||||    
T  11126555 aagtgtatccaaacataaatcaatctatgatcaactttcttttaactaaaatcaattctctcgaaataaattctaacaaaatcaattc 11126642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 535
Target Start/End: Original strand, 29023199 - 29023304
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||| ||||| |||||||||||||||||||||   |||||||||||| || ||| | |||||   |||||||| |||| ||||| |    
T  29023199 gtttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataacaatcaattttaaacaagtgtatccaaatataaacc 29023298  T
Q  530 aattca 535  Q
    ||||||    
T  29023299 aattca 29023304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 513 - 580
Target Start/End: Original strand, 35239541 - 35239608
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||||||||||||||| | || | |||||| |||||||||||||||||||||| | ||||| ||||||    
T  35239541 gtattcaaacataaattattttatattcaattcacttttaaccaaaatcaattttatcaaaatcaatt 35239608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 518 - 573
Target Start/End: Original strand, 39219769 - 39219824
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 573  Q
    ||||||||||||| |||| ||| |||||||||||||| |||||||||||| |||||    
T  39219769 caaacataaatcacttcatattaaactcacttttaacgaaaatcaattctatcaaa 39219824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 29970845 - 29970926
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| || | | |||||||||||||||| |||||||||| |  |||| ||||||||| |||||||||||    
T  29970845 gtatccaaacataaatcactttaaactcaactcacttttaactaaaatcaattat-acaaattcaattctatcaaaatcaatt 29970926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 1373081 - 1373134
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||| ||||||||||||| ||||  ||||||||||||||| ||||||||||||    
T  1373081 tgtatccaaacataaatcacttcaacttcaactcacttttatccaaaatcaatt 1373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 24297732 - 24297691
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  24297732 attatacatgtaaaatcaattttgattcaaactatccaaaca 24297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 582
Target Start/End: Original strand, 32767479 - 32767547
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||| |||||||||||||||| |||| |||||||||||||  || ||||||||| |||||| | ||||||    
T  32767479 tgtatccaaacataaatcaatttacatccaactcactttta--cataatcaattcactcaaaattaattct 32767547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 442 - 563
Target Start/End: Original strand, 14382162 - 14382285
Alignment:
Q  442 ttatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacat 538  Q
    |||||||| ||||| |||||||||  |||||||||||||   ||| || | | |||||| ||||| || | | ||||| |||||||||||||||| |  |    
T  14382162 ttatacatctaaaagtaattttgacccaaactatccaaataacatgaattgataagaatcactttaaggataatgtatccaaacataaatcaatt-atgt 14382260  T
Q  539 tcaactcacttttaaccaaaatcaa 563  Q
    |||| ||||||||||| ||||||||    
T  14382261 tcaaatcacttttaactaaaatcaa 14382285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 513 - 567
Target Start/End: Original strand, 33588763 - 33588817
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||| ||||||||||| | || ||||| ||||||||||||| |||||||||||||    
T  33588763 gtatccaaacataaataattttacattaaactcacttttaatcaaaatcaattct 33588817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 518 - 580
Target Start/End: Complemental strand, 37667118 - 37667057
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| ||||||||||||||||| |||| | ||||||| |||||||||||| ||||| ||||||    
T  37667118 caaatataaatcaattcacattaaactta-ttttaacgaaaatcaattctatcaaaatcaatt 37667057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 536 - 582
Target Start/End: Complemental strand, 45147293 - 45147247
Alignment:
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
    ||||||||||||||||||||||| || ||||| ||||| ||||||||    
T  45147293 cattcaactcacttttaaccaaattcgattctatcaaaatcaattct 45147247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 22552801 - 22552724
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||  |  |||||||||||||| |||||||||||||  | ||| |||||| |  |||||||||||    
T  22552801 caaacataaatcaattttccatcaactcacttttatccaaaatcaattcaattaaaatcaattatgtcaaaatcaatt 22552724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 555 - 596
Target Start/End: Original strand, 26125842 - 26125883
Alignment:
Q  555 caaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||| ||||||||||||| |||||| |||||    
T  26125842 caaaatcaattctcttaaactcaattctatcaaaattaattc 26125883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 567
Target Start/End: Original strand, 38516346 - 38516395
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| || |||||||||||||| ||| | ||||||||||||    
T  38516346 caaacataaatcactttacattcaactcactattatcgaaaatcaattct 38516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 444 - 595
Target Start/End: Complemental strand, 8702545 - 8702392
Alignment:
Q  444 atacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattc 540  Q
    |||||| ||||| |||||||||  ||| ||||||||||| ||   | | | |||||| ||||| || | | ||||| ||||||||||||||||  | |||    
T  8702545 atacatctaaaagtaattttgacccaagctatccaaacaacatgaattgataagaatcactttaaggataatgtatccaaacataaatcaattatc-ttc 8702447  T
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    || ||| ||||||| |||||||||| |   ||| ||||||||| |||||||||||    
T  8702446 aaatcatttttaactaaaatcaattttgctaaagtcaattctatcaaaatcaatt 8702392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 535 - 567
Target Start/End: Complemental strand, 9695424 - 9695392
Alignment:
Q  535 acattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||||||||| |||||||||||||    
T  9695424 acattcaactcacttttaaacaaaatcaattct 9695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 523 - 567
Target Start/End: Complemental strand, 31895809 - 31895765
Alignment:
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||    
T  31895809 ataaatcatttcacattcatctcacttttaactaaaattaattct 31895765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 567
Target Start/End: Complemental strand, 39211008 - 39210957
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    |||||||||||||||||| || | ||||||||   ||||||||||||||||||||    
T  39211008 gtattcaaacataaatcactttatattcaact---ttttaaccaaaatcaattct 39210957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 3e-56; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 5916411 - 5916223
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||||||| | |||| |||||||     
T  5916411 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaa 5916312  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  5916311 taaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattc 5916223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 36312215 - 36312403
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||||||| | |||| |||||||     
T  36312215 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaactcacatgaatcacttttaa 36312314  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  36312315 taaagtgtatccaaacataa-tcaattcacattcaactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattc 36312403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 453 - 596
Target Start/End: Complemental strand, 1945166 - 1945020
Alignment:
Q  453 aaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcactt 549  Q
    |||| |||||||||||||||||||||||||   ||||| || | |||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  1945166 aaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaataaagtgtatccaaacataaatcaattcacattcaactcactt 1945067  T
Q  550 ttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1945066 ttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 1945020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 7472843 - 7472655
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||| ||||| || ||||||| |||| ||||| |||||| ||||| |||||||||||||||||||||||||   |||||||| |||||| |||||||     
T  7472843 ttttaattacaattacaaggataatttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 7472744  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
      |||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7472743 ataagtgtatccaaacataa-tcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 7472655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 424 - 596
Target Start/End: Complemental strand, 9988657 - 9988482
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||| ||||||||| |||||| ||||| ||||| |||||| ||||||||||||||||||   |||||||| | |||| |||||||   |||||||| |||    
T  9988657 aaaatgatagtttggtcattacacattcaaaatcaattttcattcaaactatccaaacaacatcaactcatatgaatcacttttaaataagtgtatccaa 9988558  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  9988557 acataaatcaattcacatccaactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattc 9988482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 2213468 - 2213633
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||| | || ||| ||||||| |  ||||||| |||||||||||||    
T  2213468 tttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatca 2213567  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  2213568 attcacattcaactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattc 2213633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 433 - 596
Target Start/End: Complemental strand, 28127434 - 28127268
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||   |||||| | || ||| ||||||| |  ||||||| ||||||||||||    
T  28127434 gtttggtcattttacatttaaaatcaattttgattcaaactatccaaacaatatcaactaataaaaatcacttttaattgagtgtatccaaacataaatc 28127335  T
Q  530 aattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||| | ||||||||||||||||||||| ||||||| ||||||||||||    
T  28127334 aattcacattcaactcactttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattc 28127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 395 - 595
Target Start/End: Complemental strand, 26208114 - 26207911
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaa 491  Q
    |||| |||||||| |||||||||||||  |||||||||||||| ||||| |||||||||||| |||||||||||| |  |||||||||   ||||||       
T  26208114 gaatgagatatttgcttttaaatacaatcaaaaggatagtttggtcattgtacatttaaaatcaattttgattcatataatccaaacaacatcaacttgt 26208015  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    |||||| | ||||| | ||||||||  |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  26208014 aagaatcaattttaattaagtgtatcaaaacataaatcaattcacatccaactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatc 26207915  T
Q  592 aatt 595  Q
    ||||    
T  26207914 aatt 26207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 426 - 595
Target Start/End: Original strand, 14821117 - 14821288
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| |||||||||||||| ||||||||||   |||||||| |||||| |||| ||||||||||||| |||||    
T  14821117 aaggataatttagtcattagacattcaaaatcaattttgattcaaaatatccaaacaacatcaactcataagaatcacttctagtaaagtgtatccaaac 14821216  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||    
T  14821217 ataa-tcaattcacattaaactcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaatt 14821288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 424 - 580
Target Start/End: Original strand, 28261246 - 28261405
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||||||||| ||||||   |||||||| |||||| |||| ||    || |||| |||    
T  28261246 aaaaggataagttggtcattatacatttaaaattaattttgattcaaactattcaaacaacatcaactcataagaatcacttctatgtgagagtatccaa 28261345  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    | |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  28261346 atataaatcaattcacatccaactcacttttaagcaaaatcaattctctcaaactcaatt 28261405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 479 - 595
Target Start/End: Original strand, 31224690 - 31224806
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    |||||||||||| |||||| |||||||||||| | ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  31224690 aacatcaactcataagaatcacttttagtaaaatatatccaaacataaatcaattcacatccaactcacttttaactaaaatcaattctttcaaactcaa 31224789  T
Q  579 ttctaccaaaatcaatt 595  Q
    ||||| |||||||||||    
T  31224790 ttctatcaaaatcaatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 426 - 596
Target Start/End: Original strand, 8170267 - 8170439
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||||||||| ||||| |||||| ||||||||||||||||||   |||||||| |||||| || | |  ||| |||||| |||||    
T  8170267 aaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcataagaatcacatctgttaacgtgtatccaaac 8170366  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  8170367 ataa-tcaatttacattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattc 8170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 414 - 595
Target Start/End: Original strand, 32501928 - 32502111
Alignment:
Q  414 aaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaa 510  Q
    |||||||| ||||||| ||  ||| ||||||  |||||||||| ||||||||||||||||| |||||||   |||||||  || ||||||||||| |  |    
T  32501928 aaatacaattaaaagggtaagttggtcattacccatttaaaatcaattttgattcaaactacccaaacaatatcaactcgtaaaaattacttttaattga 32502027  T
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     ||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32502028 atgtatccaaacataa-tcaattcacctaaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 32502111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 433 - 596
Target Start/End: Complemental strand, 44619208 - 44619042
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||| |||||  ||||| ||||||||||||||||||   |||||||| || ||| | |||||   |||||||| ||||||||||||    
T  44619208 gtttggtcattttacattcaaaatcgattttaattcaaactatccaaacaacatcaactcataataatcatttttaaacaagtgtatccaaacataaatc 44619109  T
Q  530 aattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| | |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44619108 aattcccctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 44619042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 401 - 595
Target Start/End: Complemental strand, 42516154 - 42515958
Alignment:
Q  401 gatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaat 497  Q
    |||||||| ||| ||||| || ||||| |||| |||| | |||||||||| ||||| |||||| ||||||||||||||||||   ||||||| |||||||    
T  42516154 gatatttagtttcaaatagaattaaaaagataatttggttattatacattcaaaatcaattttaattcaaactatccaaacaacatcaactcgaaagaat 42516055  T
Q  498 tacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     | ||||     ||| ||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||| || |||||||||||    
T  42516054 cattttttaatgagtatattcaaacataa-tcaattcacatcaaactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaatt 42515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 395 - 595
Target Start/End: Original strand, 36548123 - 36548325
Alignment:
Q  395 gaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaa 491  Q
    |||||||||||||| ||||||||| || |||||||||| |||  ||||| ||| || ||||| |||||| ||| ||| ||||||||||   ||||| ||     
T  36548123 gaataagatatttagttttaaatataattaaaaggataatttagtcattgtacgttcaaaatcaattttaatttaaattatccaaacaacatcaacccat 36548222  T
Q  492 aagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatc 591  Q
    || ||| | ||| ||| | | |||| |||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  36548223 aaaaatcattttaagtga-gagtatccaaacataaatcaattcacatcagactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatc 36548321  T
Q  592 aatt 595  Q
    ||||    
T  36548322 aatt 36548325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 480 - 596
Target Start/End: Original strand, 2213658 - 2213774
Alignment:
Q  480 acatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaat 579  Q
    ||||||||||| |||||| |||||||   |||||||| |||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  2213658 acatcaactcataagaatcacttttaaataagtgtatccaaagacaaatcaattcacatcaaactcacttttaaccaaaatcaattctctcaaactcaat 2213757  T
Q  580 tctaccaaaatcaattc 596  Q
    |||| ||||||||||||    
T  2213758 tctatcaaaatcaattc 2213774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 30007612 - 30007534
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  30007612 caaacataaatcaattcacattcaactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattc 30007534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 433 - 596
Target Start/End: Original strand, 2215215 - 2215379
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||| ||||| |||| | ||| ||| ||||||||||   |||||||||||  |||| |||||   |||||||| ||||||||||||    
T  2215215 gtttggtcattttacattcaaaatcaattctaatttaaattatccaaacaacatcaactcaaaa--attatttttaaacaagtgtatccaaacataaatc 2215312  T
Q  530 aattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| |  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  2215313 aattcacctcaaactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattc 2215379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 452 - 596
Target Start/End: Complemental strand, 39141597 - 39141451
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||||||||||||||   |||||||| |||||| | |||||    ||||||| ||||||||| |||||||| || |||||||||    
T  39141597 aaaatcaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaatgagtgtatccaaacataa-tcaattcatatccaactcact 39141499  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||| |||||||||||| || ||||||||||||    
T  39141498 tttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattc 39141451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 512 - 596
Target Start/End: Complemental strand, 34433371 - 34433287
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||    
T  34433371 tgtatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattc 34433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 400 - 595
Target Start/End: Original strand, 28641570 - 28641768
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaa 496  Q
    |||||| || |||||||||||| |||||||||| |||| |||||| ||||||||||| |||||| ||||||  ||||||||||   |||||| | || ||    
T  28641570 agatatctaattttaaatacaattaaaaggataatttggtcattacacatttaaaatcaattttaattcaacatatccaaacaacatcaacttataataa 28641669  T
Q  497 ttacttttag-taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    | |||||||  | |||| ||  |||| |||||||||||||||| |||||||| ||||||||||||||||||||||| | ||||||| |  ||||||||||    
T  28641670 tcacttttaaatgaagt-tacccaaatataaatcaattcacatccaactcacatttaaccaaaatcaattctctcagaatcaattcaattaaaatcaatt 28641768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 424 - 595
Target Start/End: Original strand, 7296107 - 7296281
Alignment:
Q  424 aaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattcaa 520  Q
    ||||||||| || | |||||||| ||| ||||| |||||||| | ||||||||||||   |||||| |||  | ||| |||||||    ||||||| |||    
T  7296107 aaaaggataattcggtcattatatattcaaaatcaattttgacttaaactatccaaataacatcaagtcatgataatcacttttatatgagtgtatccaa 7296206  T
Q  521 acataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||| || |||| ||||||    
T  7296207 acataaatcaattcacatcaaactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaatt 7296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 434 - 595
Target Start/End: Complemental strand, 25748027 - 25747864
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| ||||||| || ||||  ||||||||||||||||| ||||||| ||   | | | |||||| | ||||||   | ||||| |||||||||||||    
T  25748027 tttgataattatactttcaaaagcaattttgattcaaactacccaaacaacataaattgataagaatcaattttaggttattgtatccaaacataaatca 25747928  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  25747927 att-acattcaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaactcaatt 25747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 38600511 - 38600424
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||| | |||||| |||||    
T  38600511 aagtgtattcaaacataaatcaatttacatcaaactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaattc 38600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 479 - 595
Target Start/End: Complemental strand, 42089630 - 42089510
Alignment:
Q  479 aacatcaactcaaaagaattacttttagtaaagtgtatt----caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaac 574  Q
    |||||||||||| |||||| |||||||   ||||||||     |||||||||||||||||||||||||||||||||||| |||||||||||||||  |||    
T  42089630 aacatcaactcataagaatcacttttaaataagtgtatctatccaaacataaatcaattcacattcaactcacttttaatcaaaatcaattctcttgaac 42089531  T
Q  575 tcaattctaccaaaatcaatt 595  Q
    | ||||||| |||||||||||    
T  42089530 ttaattctatcaaaatcaatt 42089510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 510 - 596
Target Start/End: Complemental strand, 45714735 - 45714649
Alignment:
Q  510 agtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||| |||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||| || ||||||||||||    
T  45714735 agtgtatccaaacataaatcaattcacatcgaactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattc 45714649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 412 - 595
Target Start/End: Complemental strand, 7295514 - 7295330
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||| ||| |||||||||| || | |||||||| ||| ||||| || ||||| | ||||||||||||||   ||||||||  | ||| |||||||       
T  7295514 ttaaatgcaattaaaaggataattcggtcattatatattcaaaatcaagtttgacttaaactatccaaacaacatcaactcatgataatcacttttat-- 7295417  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    | |||||| |||||||||||||||| || |  |||||| ||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  7295416 atgtgtatccaaacataaatcaatttacgtcaaactcatttttaaccagaatcaattctctcaaactcaattctatcaaaattaatt 7295330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 441 - 596
Target Start/End: Complemental strand, 31562823 - 31562668
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    |||| ||||| ||||| |||||||||||||| ||||||||||   | |||||| |||||| |||||||  || | || | ||||||||| |||||||||     
T  31562823 attacacattcaaaatcaattttgattcaaattatccaaacaatataaactcataagaatcactttta--aacgagtgtccaaacataa-tcaattcacc 31562727  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |  || ||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  31562726 tcaaattcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattc 31562668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 511 - 596
Target Start/End: Complemental strand, 41580776 - 41580691
Alignment:
Q  511 gtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| ||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  41580776 gtgtatccaaacataaattaatttacatcaaactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaattc 41580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 434 - 596
Target Start/End: Original strand, 3853862 - 3854027
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||||| |||| ||||| ||||  ||||||||||||||||||||||||| ||   | | | |||||| | |||||    | ||||| |||||||||||||    
T  3853862 tttgataattacacattcaaaagcaattttgattcaaactatccaaacaacatagattgataagaatcaattttacatgaatgtatccaaacataaatca 3853961  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||| ||||||||||||||||||| ||||||||||||| ||||| ||||||| | |||| |||||||    
T  3853962 atttacattcaactcacttttaatcaaaatcaattctatcaaaatcaattccatcaaactcaattc 3854027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 433 - 583
Target Start/End: Original strand, 23358219 - 23358372
Alignment:
Q  433 gtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattcaaacataaatc 529  Q
    ||||| ||||| |||||| ||||| ||||||||||||||||||||||||| ||   |||||  | ||| |||||||   |||||||| ||||||||||      
T  23358219 gtttggtcattttacattcaaaatcaattttgattcaaactatccaaacaacattaactcatcacaatcacttttaaacaagtgtatccaaacataaact 23358318  T
Q  530 aattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    | ||||  |  ||||||||||||| |||||||||||||||||||||||||||||    
T  23358319 atttcatctcaaactcacttttaatcaaaatcaattctctcaaactcaattcta 23358372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 441 - 596
Target Start/End: Original strand, 16467055 - 16467213
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaac---atcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    |||||||||  |||||||||||||||  |||||||||||||   |||||| || |||||| |||||||    |   ||| |||||||||||||||| |||    
T  16467055 attatacatcaaaaattaattttgatctaaactatccaaactacatcaacccataagaatcacttttacattatcatatccaaacataaatcaatttaca 16467154  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |  ||||||||||||||||||||||||| |  |||| ||||||||| ||||||||||||    
T  16467155 tctaactcacttttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaattc 16467213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 18511145 - 18511229
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||| |||||||||||||||| ||||| || |||||||||||||||||||||| | ||||| |||||| || ||||||||||||    
T  18511145 tgtatccaaacataaatcaattaacatttaaatcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattc 18511229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 412 - 554
Target Start/End: Complemental strand, 25940409 - 25940264
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattacttttagta 508  Q
    |||||| ||| || ||||||| |||| |||||||| ||| ||||| |||||||||||||||| ||||   ||||||| |||| || ||| |||| ||       
T  25940409 ttaaatgcaattagaaggataatttggtcattatatattcaaaatcaattttgattcaaactgtccaaacaacatcatctcataataatcacttctatac 25940310  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaac 554  Q
     |||||||||||| ||||||||||||||||  ||||||||||||||    
T  25940309 gagtgtattcaaatataaatcaattcacatcaaactcacttttaac 25940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 588
Target Start/End: Original strand, 8041328 - 8041397
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaa 588  Q
    |||||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||| ||||    
T  8041328 caaacataaatcaatt-acattcaattcacttttattcaaaatcaattctctcaaactcaattctatcaaa 8041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 514 - 595
Target Start/End: Complemental strand, 34997299 - 34997218
Alignment:
Q  514 tattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| |||||||||| | ||||||| |||| || |||||||||||    
T  34997299 tattcaaacataaatcaattcacatccaattcatttttaacaaaaatcaattttgtcaaactaaattttatcaaaatcaatt 34997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 441 - 580
Target Start/End: Original strand, 27911375 - 27911517
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaa---catcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcaca 537  Q
    |||| |||| |||||| |||||| ||| ||| ||||||||   ||||||||  ||| ||| |||||||    ||| ||| ||||||||||||||||||||    
T  27911375 attagacatctaaaatcaattttaatttaaagtatccaaataacatcaacttgaaataatcacttttaaatgagtatatccaaacataaatcaattcaca 27911474  T
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |  |||||||||||||||||| |||||||| ||||| ||||||    
T  27911475 tcaaactcacttttaaccaaactcaattctatcaaaatcaatt 27911517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 23267400 - 23267345
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  23267400 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 23267345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 23359994 - 23359927
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaatt 580  Q
    |||| ||||||||||||| || |||||||||||||||||||||||||||||||||  |||| ||||||    
T  23359994 gtatccaaacataaatcactttacattcaactcacttttaaccaaaatcaattctaccaaaatcaatt 23359927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 595
Target Start/End: Original strand, 12110918 - 12110999
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| || | ||||||||||||||||||||||||||||| |  |||| ||||||||| |||||||||||    
T  12110918 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 12110999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 444 - 506
Target Start/End: Original strand, 2234899 - 2234963
Alignment:
Q  444 atacatttaaaattaattttgattcaaactatccaaacatc--aactcaaaagaattacttttag 506  Q
    ||||||||||||||||||||||||||||||||||||||| |  |||||| |||||| ||||||||    
T  2234899 atacatttaaaattaattttgattcaaactatccaaacaacataactcataagaatcacttttag 2234963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 513 - 573
Target Start/End: Complemental strand, 30599968 - 30599908
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 573  Q
    |||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  30599968 gtatccaaacacaaatcaattgacactcaactcacttttaaccaaaatcaattctatcaaa 30599908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 39106855 - 39106766
Alignment:
Q  393 aagaataagatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||| ||||||||  |||| ||||||| | |||||||| |||| ||||| || ||||||||| |||||||||||||| |||| |||||    
T  39106855 aagaatgagatattttgtttttaatacaatttaaaggataatttggtcattgtatatttaaaatcaattttgattcaaattatctaaaca 39106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 518 - 566
Target Start/End: Original strand, 10918652 - 10918700
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattc 566  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||    
T  10918652 caaacataaatcactttacattcaactcacttttatccaaaatcaattc 10918700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 596
Target Start/End: Original strand, 11240714 - 11240797
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||||||||||||||||||| |||||  || ||||||||| | | |||| |||||  | ||||||||||||    
T  11240714 tgtattcaaacataaatcaattcacattcaactcgcttttttcc-aaatcaattttgttaaacccaattaaatcaaaatcaattc 11240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 513 - 565
Target Start/End: Original strand, 23377548 - 23377600
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||| |||||||||||||| | |||||||||||||||||||||||||| ||||    
T  23377548 gtatccaaacataaatcaacttacattcaactcacttttaaccaaaattaatt 23377600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 26806319 - 26806238
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| ||  || ||||||||||||||| ||||||||||||| | ||| | ||||| |||||||||||||    
T  26806319 gtatccaaacataaatcacttttcactcaactcacttttaatcaaaatcaattctgt-aaaattaattcaaccaaaatcaatt 26806238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 519 - 596
Target Start/End: Original strand, 1763270 - 1763346
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||| || | |||||||||| |||||||||||||||||| |  |||| |||||| || ||||||||||||    
T  1763270 aaacataaatcactttaaattcaactcaattttaaccaaaatcaatt-ttacaaaatcaattttatcaaaatcaattc 1763346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 2212749 - 2212814
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttga 465  Q
    ||||||||| ||||||||| || |||||||||| |||| |||||  ||||||||||| ||||||||    
T  2212749 agatatttaattttaaataaaattaaaaggataatttggtcattgcacatttaaaatcaattttga 2212814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 11759857 - 11759801
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||| |||||| ||| ||||| || |||||||||||||||| |||||||||||    
T  11759857 aagtgtatacaaacacaaaccaatttaccttcaactcacttttaatcaaaatcaatt 11759801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 557 - 596
Target Start/End: Complemental strand, 33597639 - 33597600
Alignment:
Q  557 aaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  33597639 aaatcaattctctcaaaatcaattctaccagaatcaattc 33597600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 565
Target Start/End: Complemental strand, 3654840 - 3654794
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||| ||| | ||||||||||||||||||||| ||||||||||    
T  3654840 aaacataagtcactgcacattcaactcacttttaactaaaatcaatt 3654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 40704670 - 40704723
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||  |||||||||| |||||||| | | ||||||||||||||||||    
T  40704670 tgtattcaaaattaaatcaatttacattcaaataaattttaaccaaaatcaatt 40704723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 42770455 - 42770379
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||| |||||||  |||||||||||||||||| |||||| |||| | | ||| ||||||| ||| |||||||||    
T  42770455 caaacatagatcaattttcattcaactcacttttaatcaaaatgaattatgt-aaaatcaattcaaccgaaatcaatt 42770379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 519 - 568
Target Start/End: Complemental strand, 43436339 - 43436290
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 568  Q
    ||||||||||||||| ||||  || |||||||||| ||||||||||||||    
T  43436339 aaacataaatcaatttacatctaattcacttttaatcaaaatcaattctc 43436290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 43858271 - 43858194
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||     |||||||||||||  |||||||||||||  | ||| ||||||||| |||||||||||    
T  43858271 caaacataaatcaattattcatcaactcacttttgcccaaaatcaattcaattaaaatcaattctatcaaaatcaatt 43858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 402 - 596
Target Start/End: Original strand, 10826012 - 10826209
Alignment:
Q  402 atatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaatt 498  Q
    ||||||| || ||| || || ||||||||||||||| |||||  | |||||||||||||||||||||||||||||||||||   |||||||| ||||||     
T  10826012 atatttatttctaattataattaaaaggatagtttggtcattccatatttaaaattaattttgattcaaactatccaaacaaaatcaactcataagaatc 10826111  T
Q  499 acttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||   |||| ||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||    
T  10826112 acttttaaataagtatatccaaacaaaaatcaattcaaattcaactcacttttaaccaaaatcaattctctcaaactcaattttatcaaaattaattc 10826209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 13739135 - 13739323
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||| ||||| || ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||   |||||||| |||||| |||||||     
T  13739135 ttttaattacaattacaaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaa 13739234  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
      |||||||| ||||||||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13739235 acaagtgtatccaaacataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 13739323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 410 - 568
Target Start/End: Original strand, 16548068 - 16548229
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| ||||||||||||||  |||||| ||||| ||||| |||||||||||||||||||||||||   ||||| || | |||| |||||||     
T  16548068 ttttaaatacaattaaaaggatagtttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacatgaatcacttttaa 16548167  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 568  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16548168 taaagtgtatccaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctc 16548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 6208218 - 6208047
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||||||||||||||||||||||| |||||   |||||||| |||||| |||||||||||||||||| |||||    
T  6208218 aaggataatttagtcattagacattcaaaattaattttgattcaaactatctaaacaacatcaactcataagaatcacttttagtaaagtgtatccaaac 6208119  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||    
T  6208118 ataa-tcaattcacattcaactcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaatt 6208047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 400 - 596
Target Start/End: Complemental strand, 33899187 - 33898988
Alignment:
Q  400 agatatttacttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaa 496  Q
    ||||||||| |||||||||||| |||||||||| |||| |||||| ||||| ||||| |||||||||| |||| |||||||||| |   ||||| |||||    
T  33899187 agatatttaattttaaatacaattaaaaggatattttggtcattacacattcaaaatcaattttgatttaaaccatccaaacattattaactcataagaa 33899088  T
Q  497 ttacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | |||||||    ||||||| |||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  33899087 tcacttttacattagtgtatccaaacataaatcaattcatatcaaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 33898988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 426 - 596
Target Start/End: Original strand, 13744651 - 13744823
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||| ||||| |||||| |||||||||||||||||||||||||||||||   |||||||| |||||| |||||||   |||||||| |||||    
T  13744651 aaggataatttggtcattttacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcacttttaaacaagtgtatccaaac 13744750  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13744751 ataa-tcaattcacctcaaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 13744823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 17830169 - 17829981
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||||| |||| | ||||||   |||||| ||||| ||||| |||||||||||||||||||||||||   ||||| || |||||  |||| ||     
T  17830169 ttttaaatacaattaaacg-atagttcagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaacccacaagaacgacttctaa 17830071  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||| ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17830070 taaactgtaactaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 17829981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 434 - 595
Target Start/End: Complemental strand, 29409399 - 29409235
Alignment:
Q  434 tttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatca 530  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||   |||||||| |||||| | |||||  ||| ||||| |||||||||||||    
T  29409399 tttggtcattatacattcaaaattaattttgattcaaactatccaaacaacatcaactcataagaatcatttttaaaaaactgtatccaaacataaatca 29409300  T
Q  531 attcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||  ||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||    
T  29409299 attcacatcaaactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatcaatt 29409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 410 - 582
Target Start/End: Complemental strand, 16442522 - 16442347
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttag 506  Q
    |||||||||  | ||||||||||||||| |||||| ||||| ||||| |||||| ||||||| ||||||||||   |||||||| | |||| |||||||     
T  16442522 ttttaaatattattaaaaggatagtttggtcattacacattcaaaatcaattttcattcaaattatccaaacaatatcaactcatatgaatcacttttaa 16442423  T
Q  507 taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattct 582  Q
      |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||    
T  16442422 ataagtgtatccaaacataaatcaattcacattcaactcacttgtaactaaaatcaattctctcaaaatcaattct 16442347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 459 - 596
Target Start/End: Original strand, 699536 - 699674
Alignment:
Q  459 attttgattcaaactatccaa--acatcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaacca 556  Q
    |||||||||||||||||||||  |||| |||| | |||||||||||||||||||||| || |||||||||||||||||  || |||||||| |||||| |    
T  699536 attttgattcaaactatccaacaacattaacttataagaattacttttagtaaagtgcatccaaacataaatcaattcttatccaactcac-tttaacta 699634  T
Q  557 aaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  699635 aaatcaattctttcaaactcaattctatcaaaatcaattc 699674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 411 - 596
Target Start/End: Original strand, 21455812 - 21455998
Alignment:
Q  411 tttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattacttttagt 507  Q
    ||||||||||| ||||| |||| ||| ||||||| |||||||||||||||||||||||||||||| ||   ||||| ||||||  ||||| ||||||| |    
T  21455812 tttaaatacaattaaaaagataatttaatcattacacatttaaaattaattttgattcaaactatgcaaacaacattaactcatgagaatcacttttaat 21455911  T
Q  508 aaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||| ||||||  |||  |||||||| ||||| ||||||||| ||||||||||||  ||||||||||| || ||||||||||||    
T  21455912 -aagtgtatacaaaca-caattgattcacatccaacttacttttaactaaaatcaattcttacaaactcaattatatcaaaatcaattc 21455998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 520 - 595
Target Start/End: Complemental strand, 1312498 - 1312423
Alignment:
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||    
T  1312498 aacataaatcaattcgcattcaactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaatt 1312423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 512 - 595
Target Start/End: Complemental strand, 21254945 - 21254863
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||||    
T  21254945 tgtatccaaacataaatcaatt-acattcaactcacttttaatcaaattcaattctctcaaactcaattctatcaaactcaatt 21254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 595
Target Start/End: Original strand, 31132435 - 31132580
Alignment:
Q  452 aaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaacataaatcaattcacattcaactcact 548  Q
    ||||| |||||||||||||||||||||||||   ||||| || |||||| |||||||   |||||||| |||| ||||   |||| |||| ||||||| |    
T  31132435 aaaatcaattttgattcaaactatccaaacaacatcaacccataagaatcacttttaaataagtgtatccaaaaataacg-aattaacatccaactcatt 31132533  T
Q  549 tttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||| |||| ||||||||||||||||| |||||||||||    
T  31132534 tttagccaaaataaattatctcaaactcaattctatcaaaatcaatt 31132580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 596
Target Start/End: Complemental strand, 5584109 - 5584032
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||| ||||| ||||||||||||  ||||||||||||| ||||| ||||||||| ||||||||||||    
T  5584109 caaacataaatcaatt-acattaaactcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaattc 5584032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 596
Target Start/End: Original strand, 7215505 - 7215691
Alignment:
Q  411 tttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatcca---aacatcaactcaaaagaattacttttagt 507  Q
    |||||||| || | |||||||| ||| ||||||| | |||||||||||||||||||||||  ||| ||   ||||| ||||||  ||||| ||||||| |    
T  7215505 tttaaataaaatttaaaggataatttaatcattacatatttaaaattaattttgattcaatttatgcaaacaacattaactcatgagaatcacttttaat 7215604  T
Q  508 aaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     |||||||| ||||||| |||  |||||| | ||| ||||||||||| |||||||| |||   |||||||||| || ||||||||||||    
T  7215605 -aagtgtatacaaacat-aattgattcacgtccaattcacttttaactaaaatcaagtcttaaaaactcaattatatcaaaatcaattc 7215691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 16122067 - 16121985
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||| ||||||| | ||| |||| |||||||||||||||||||||||| ||||| |||||| || |||||||||||    
T  16122067 gtattcaaacacaaatcaacttacactcaaatcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaatt 16121985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 536 - 596
Target Start/End: Complemental strand, 32599505 - 32599445
Alignment:
Q  536 cattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||||||    
T  32599505 cattcaactcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaattc 32599445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 541 - 596
Target Start/End: Complemental strand, 15151543 - 15151488
Alignment:
Q  541 aactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  15151543 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 15151488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 596
Target Start/End: Complemental strand, 29399846 - 29399776
Alignment:
Q  525 aaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||||| ||||||||| ||| || ||||||||||||||| ||||||||||||||| ||||||||||||    
T  29399846 aaatcaattc-cattcaacttactctttaccaaaatcaattctatcaaactcaattctatcaaaatcaattc 29399776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 565
Target Start/End: Original strand, 1499990 - 1500043
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  1499990 tgtattcaaacataaatcaatttacactcaactcgcttttagccaaaatcaatt 1500043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 578
Target Start/End: Original strand, 882776 - 882842
Alignment:
Q  512 tgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaa 578  Q
    ||||| ||||||||||||| || || ||||||||| ||||||| | ||||||||| |||||||||||    
T  882776 tgtatccaaacataaatcattttaccttcaactcaattttaactagaatcaattcactcaaactcaa 882842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 518 - 595
Target Start/End: Complemental strand, 3605812 - 3605736
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||| ||  || ||||||||||||||| |||||||||||||  |||| |||||| || |||||||||||    
T  3605812 caaacataaatcacttttcactcaactcacttttaatcaaaatcaattct-acaaaatcaattatatcaaaatcaatt 3605736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 535 - 596
Target Start/End: Complemental strand, 26274671 - 26274610
Alignment:
Q  535 acattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||||||||  || |||||||| | ||||| ||||||||| ||||||||||||    
T  26274671 acattcaactcacttttagtcagaatcaattatgtcaaaatcaattctatcaaaatcaattc 26274610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 573
Target Start/End: Original strand, 29682202 - 29682262
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaa 573  Q
    |||| |||||| ||||||||| |||  ||||||| |||||||||||||||||||| |||||    
T  29682202 gtatccaaacacaaatcaatttacacgcaactcaattttaaccaaaatcaattctatcaaa 29682262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 519 - 565
Target Start/End: Original strand, 25208723 - 25208769
Alignment:
Q  519 aaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||||||| || |||||||||||||||||||  ||||||||||    
T  25208723 aaacataaatcattttacattcaactcacttttaattaaaatcaatt 25208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Original strand, 27825574 - 27825615
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    ||||||||||||||| ||||||||||  ||||||||||||||    
T  27825574 attatacatttaaaagtaattttgatcaaaactatccaaaca 27825615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 423 - 595
Target Start/End: Original strand, 8391 - 8566
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||| ||||| |||||| ||||| |||||||||||||||||||||||||   |||||||| || ||| | |||||  ||||||||| ||    
T  8391 taaaaggataatttggtcattgtacattcaaaatcaattttgattcaaactatccaaacaacatcaactcataaaaatcatttttaaaaaagtgtatcca 8490  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||| |||||||||||    
T  8491 aacataaatcaattcacatcaaactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaatt 8566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 91; Significance: 9e-44; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 426 - 595
Target Start/End: Complemental strand, 29278 - 29107
Alignment:
Q  426 aaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattcaaac 522  Q
    ||||||| |||  |||||| ||||| ||||| |||||||||||||||||||||||||   |||| ||| |||||| |||| || |||||||||| |||||    
T  29278 aaggataatttagtcattacacattcaaaatcaattttgattcaaactatccaaacaacatcaattcataagaataacttctattaaagtgtatccaaac 29179  T
Q  523 ataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  29178 ataa-tcaattcacattcaactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaatt 29107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 253057 - 253246
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttag 506  Q
    ||||||||||||| |||||||||  ||| |||||||| ||| ||||| ||||||||||||| ||||||||||| ||   ||||| |||||| |||||||     
T  253057 ttttaaatacaacaaaaaggataagttggtcattatatattcaaaatcaattttgattcaatctatccaaacaacattaactcataagaatcacttttaa 253156  T
Q  507 -taaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
     | ||| |||| |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  253157 ctgaag-gtatccaaacataaatcaattcatatccaactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattc 253246  T

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Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 219693 - 219769
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||| ||  |||||||||||||||||| |||||| | || | | ||| ||||||| |||||||||||||    
T  219693 caaacataaatcacttttcattcaactcacttttaatcaaaattagttatgt-aaaatcaattcaaccaaaatcaatt 219769  T

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Target: scaffold0394 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 410 - 596
Target Start/End: Complemental strand, 6002 - 5813
Alignment:
Q  410 ttttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaa-----ctatccaaaca---tcaactcaaaagaattact 501  Q
    |||||||||||| |||| |||||||||  |||||| ||||| ||||| ||||||||||||||     |||||||||||   ||||| || |||||| |||    
T  6002 ttttaaatacaattaaa-ggatagtttagtcattacacattcaaaatcaattttgattcaaattaaactatccaaacaacatcaacccacaagaatcact 5904  T
Q  502 tttagtaaagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    | || ||||  ||| ||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  5903 tctaataaacggtaatcaaacat----caattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattc 5813  T

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Target: scaffold0381 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 423 - 596
Target Start/End: Original strand, 9053 - 9228
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaacatca---actcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||  |||||||||||| ||||| |||||| |||||||||||||||||| ||   ||||| |||||| ||||| |    ||||||| ||    
T  9053 taaaaggataatttagtcattatacattcaaaatcaattttaattcaaactatccaaacaacatctactcataagaatcactttcaagtgagtgtatcca 9152  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||| | ||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  9153 aacatata-caattcatatctaactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattc 9228  T

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Target: scaffold0983 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 423 - 595
Target Start/End: Complemental strand, 2427 - 2252
Alignment:
Q  423 taaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagtaaagtgtattca 519  Q
    |||||||||| |||| |||||| | ||  ||||| ||||||||||||||||||| |||||   ||||||   || ||  |||||||   |||||| | ||    
T  2427 taaaaggataatttggtcattacatatccaaaatcaattttgattcaaactatctaaacaacgtcaacttgtaaaaaccacttttaaacaagtgtgtcca 2328  T
Q  520 aacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||| | ||||||||||||||  |||||||||||    
T  2327 aacataaatcaattcacctcaaactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaatt 2252  T

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Target: scaffold0217 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 595
Target Start/End: Complemental strand, 2197 - 2011
Alignment:
Q  412 ttaaatacaactaaaaggatagtttgatcattatacatttaaaattaattttgattcaaactatccaaaca---tcaactcaaaagaattacttttagta 508  Q
    |||||| ||| |||||||||| || | || ||||| ||| ||||| |||||||| | ||||||||||||||   ||||  ||  | ||| |||||||       
T  2197 ttaaatccaattaaaaggataattcggtctttatatattcaaaatcaattttgacttaaactatccaaacaacatcaagccatgataatcacttttatat 2098  T
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
     |||| || |||||||||||||||||| ||  |||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||    
T  2097 gagtgcatccaaacataaatcaattcatatcaaactcattttgaaccaaaatcaattctttcaaactcaattctatcaaaatcaatt 2011  T

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Target: scaffold0014 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 596
Target Start/End: Complemental strand, 118480 - 118393
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    |||||||| |||||||||||||||| ||||  |||||||||||||| |||||| ||||| ||||||||||||| | ||||||||||||    
T  118480 aagtgtatccaaacataaatcaatttacatcaaactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatcaattc 118393  T

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Target: scaffold0172 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 513 - 595
Target Start/End: Complemental strand, 15323 - 15242
Alignment:
Q  513 gtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||| ||||||||||||| || | ||||||||||||||||||||||||||||| |  |||| ||||||||| |||||||||||    
T  15323 gtatccaaacataaatcactttatattcaactcacttttaaccaaaatcaatt-tgacaaaatcaattctatcaaaatcaatt 15242  T

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Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 199430 - 199381
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattct 567  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  199430 caaacataaatcactttacgttcaactcacttttaaccaaaatcaattct 199381  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 518 - 583
Target Start/End: Original strand, 301565 - 301630
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattcta 583  Q
    ||||||||||| |||| | | ||||||||||||| ||||||||||||||  |||||||||||||||    
T  301565 caaacataaataaatttatactcaactcacttttgaccaaaatcaattcgatcaaactcaattcta 301630  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 518 - 596
Target Start/End: Original strand, 65540 - 65617
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaattc 596  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||| || || | ||||||||| |||||| |||||    
T  65540 caaacataaatcactttacattaaactcatttttaaccaaaatcaatt-tcacagaatcaattctatcaaaattaattc 65617  T

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Target: scaffold0031 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 565
Target Start/End: Original strand, 99702 - 99749
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||| |||| |||||||||||||||||||  ||||||||||    
T  99702 caaacataaattaatttacattcaactcacttttaattaaaatcaatt 99749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 565
Target Start/End: Original strand, 99918 - 99965
Alignment:
Q  518 caaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    ||||||||||| |||| |||||||||||||||||||  ||||||||||    
T  99918 caaacataaattaatttacattcaactcacttttaattaaaatcaatt 99965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 482
Target Start/End: Complemental strand, 9299 - 9258
Alignment:
Q  441 attatacatttaaaattaattttgattcaaactatccaaaca 482  Q
    |||||||||||||||| |||||||||  ||||||||||||||    
T  9299 attatacatttaaaatcaattttgatcaaaactatccaaaca 9258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 595
Target Start/End: Original strand, 46822 - 46879
Alignment:
Q  538 ttcaactcacttttaaccaaaatcaattctctcaaactcaattctaccaaaatcaatt 595  Q
    |||||||||||||||  ||||||||||||| ||||| |||||| |  |||||||||||    
T  46822 ttcaactcacttttaggcaaaatcaattctatcaaaatcaattatgtcaaaatcaatt 46879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 565
Target Start/End: Complemental strand, 38425 - 38369
Alignment:
Q  509 aagtgtattcaaacataaatcaattcacattcaactcacttttaaccaaaatcaatt 565  Q
    |||||||| ||| |||||||||||| ||||| |||| | ||||||||||||| ||||    
T  38425 aagtgtatccaatcataaatcaatttacatttaacttaattttaaccaaaattaatt 38369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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