View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1245_low_53 (Length: 306)

Name: NF1245_low_53
Description: NF1245
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1245_low_53
NF1245_low_53
[»] chr3 (67 HSPs)
chr3 (30-294)||(39429372-39429633)
chr3 (31-273)||(31270323-31270563)
chr3 (31-273)||(40013164-40013407)
chr3 (31-273)||(14585459-14585699)
chr3 (133-273)||(53402718-53402858)
chr3 (42-273)||(36624587-36624814)
chr3 (133-276)||(105924-106067)
chr3 (58-273)||(22484990-22485202)
chr3 (42-258)||(35174713-35174930)
chr3 (31-273)||(53155322-53155562)
chr3 (31-273)||(1074786-1075025)
chr3 (31-273)||(31462638-31462878)
chr3 (42-273)||(54238912-54239138)
chr3 (133-273)||(32080646-32080786)
chr3 (31-273)||(40883758-40884001)
chr3 (133-270)||(11819180-11819317)
chr3 (136-273)||(55454966-55455102)
chr3 (31-273)||(36691691-36691931)
chr3 (133-272)||(33637500-33637639)
chr3 (63-200)||(2147756-2147891)
chr3 (133-270)||(30156176-30156313)
chr3 (137-223)||(55090525-55090611)
chr3 (136-273)||(48854977-48855114)
chr3 (156-273)||(49627987-49628104)
chr3 (34-272)||(48652333-48652569)
chr3 (162-273)||(3457065-3457176)
chr3 (175-273)||(54706607-54706705)
chr3 (133-278)||(53962214-53962360)
chr3 (149-277)||(3961650-3961779)
chr3 (133-273)||(19861171-19861311)
chr3 (191-273)||(13701893-13701975)
chr3 (133-273)||(39610309-39610447)
chr3 (137-277)||(48212440-48212581)
chr3 (174-273)||(45047652-45047751)
chr3 (133-277)||(3312540-3312685)
chr3 (158-287)||(25135189-25135318)
chr3 (154-278)||(27189291-27189416)
chr3 (133-223)||(4206456-4206543)
chr3 (57-199)||(38527287-38527426)
chr3 (133-200)||(40716287-40716354)
chr3 (210-273)||(48401036-48401099)
chr3 (133-235)||(40702546-40702648)
chr3 (175-276)||(566287-566388)
chr3 (31-273)||(24483571-24483810)
chr3 (31-122)||(34960899-34960990)
chr3 (31-90)||(53402627-53402687)
chr3 (162-276)||(2147882-2147996)
chr3 (148-267)||(42167911-42168030)
chr3 (210-277)||(47733765-47733832)
chr3 (210-273)||(55446231-55446294)
chr3 (174-276)||(550344-550446)
chr3 (219-273)||(19645374-19645428)
chr3 (151-277)||(31730759-31730885)
chr3 (192-273)||(34103640-34103720)
chr3 (175-243)||(37451877-37451945)
chr3 (42-122)||(49628128-49628207)
chr3 (156-291)||(31348567-31348702)
chr3 (42-183)||(41868276-41868415)
chr3 (151-205)||(534092-534146)
chr3 (157-223)||(4817809-4817875)
chr3 (137-171)||(19645322-19645356)
chr3 (158-223)||(34960807-34960872)
chr3 (213-258)||(38528664-38528709)
chr3 (228-273)||(41868215-41868260)
chr3 (31-122)||(4219179-4219268)
chr3 (31-122)||(13702013-13702104)
chr3 (133-181)||(24520734-24520782)
[»] chr6 (36 HSPs)
chr6 (133-277)||(4921761-4921905)
chr6 (133-273)||(23654347-23654487)
chr6 (133-273)||(31937304-31937444)
chr6 (42-263)||(19402704-19402920)
chr6 (141-258)||(4393875-4393992)
chr6 (133-273)||(31705262-31705402)
chr6 (151-273)||(35219797-35219919)
chr6 (133-273)||(23638004-23638142)
chr6 (31-272)||(12481255-12481494)
chr6 (191-273)||(15589992-15590074)
chr6 (133-245)||(29284849-29284962)
chr6 (149-273)||(1106751-1106875)
chr6 (133-273)||(6296133-6296273)
chr6 (133-273)||(6302943-6303083)
chr6 (42-273)||(6419742-6419970)
chr6 (154-287)||(5527495-5527629)
chr6 (31-269)||(8693542-8693784)
chr6 (31-171)||(15590065-15590203)
chr6 (152-277)||(13871500-13871625)
chr6 (64-278)||(2488169-2488379)
chr6 (188-273)||(2304722-2304807)
chr6 (133-205)||(14783123-14783195)
chr6 (133-272)||(8978625-8978763)
chr6 (191-273)||(23101292-23101374)
chr6 (189-278)||(1915065-1915154)
chr6 (133-183)||(23101353-23101403)
chr6 (31-198)||(21507767-21507932)
chr6 (133-272)||(3610230-3610370)
chr6 (214-278)||(16328947-16329011)
chr6 (186-278)||(28943421-28943512)
chr6 (175-258)||(14783041-14783124)
chr6 (214-276)||(16338184-16338246)
chr6 (191-273)||(21507721-21507803)
chr6 (156-241)||(15175930-15176015)
chr6 (31-71)||(5527700-5527740)
chr6 (230-278)||(16339728-16339776)
[»] chr2 (65 HSPs)
chr2 (31-273)||(9978553-9978793)
chr2 (31-273)||(20561016-20561256)
chr2 (42-273)||(36868017-36868245)
chr2 (31-258)||(12704684-12704909)
chr2 (31-273)||(35333502-35333742)
chr2 (133-273)||(34962960-34963100)
chr2 (31-273)||(43474012-43474252)
chr2 (31-258)||(38535204-38535429)
chr2 (133-277)||(5754385-5754529)
chr2 (133-278)||(7581966-7582111)
chr2 (133-273)||(29542889-29543030)
chr2 (31-273)||(4604191-4604431)
chr2 (133-272)||(22597232-22597371)
chr2 (133-273)||(12891002-12891143)
chr2 (56-273)||(32314465-32314679)
chr2 (31-245)||(25067849-25068060)
chr2 (42-273)||(27095714-27095943)
chr2 (133-273)||(4426542-4426682)
chr2 (133-273)||(4732167-4732307)
chr2 (133-273)||(4739426-4739566)
chr2 (133-273)||(7072832-7072972)
chr2 (133-273)||(10286891-10287030)
chr2 (31-277)||(15919871-15920115)
chr2 (35-273)||(28230981-28231216)
chr2 (139-277)||(34471069-34471207)
chr2 (133-273)||(11937743-11937882)
chr2 (133-273)||(28261772-28261912)
chr2 (133-273)||(31908701-31908840)
chr2 (151-276)||(11798404-11798530)
chr2 (133-273)||(44942382-44942523)
chr2 (31-273)||(17268010-17268248)
chr2 (31-275)||(17767442-17767675)
chr2 (32-273)||(13740544-13740783)
chr2 (159-273)||(38384341-38384455)
chr2 (133-273)||(41797691-41797828)
chr2 (138-273)||(13878893-13879026)
chr2 (138-273)||(14019018-14019151)
chr2 (56-273)||(34416647-34416859)
chr2 (133-270)||(823845-823982)
chr2 (157-273)||(9689869-9689985)
chr2 (133-273)||(18089281-18089420)
chr2 (31-171)||(33012074-33012212)
chr2 (191-269)||(33012203-33012281)
chr2 (189-277)||(20124649-20124737)
chr2 (174-276)||(6431283-6431385)
chr2 (31-276)||(45694327-45694576)
chr2 (162-276)||(13548782-13548895)
chr2 (133-273)||(43695965-43696105)
chr2 (147-276)||(40039189-40039319)
chr2 (133-278)||(5171893-5172037)
chr2 (156-276)||(27666330-27666450)
chr2 (133-205)||(32015321-32015392)
chr2 (59-122)||(6431420-6431483)
chr2 (133-287)||(43711432-43711583)
chr2 (146-274)||(6510592-6510720)
chr2 (31-75)||(12994292-12994336)
chr2 (58-276)||(17792498-17792714)
chr2 (215-271)||(32015432-32015488)
chr2 (151-223)||(38450352-38450424)
chr2 (133-204)||(19382394-19382465)
chr2 (210-272)||(11581015-11581077)
chr2 (174-291)||(11426781-11426898)
chr2 (162-243)||(20607228-20607309)
chr2 (210-259)||(26254834-26254883)
chr2 (31-122)||(17116435-17116529)
[»] chr7 (64 HSPs)
chr7 (42-273)||(1281021-1281249)
chr7 (56-273)||(10094464-10094678)
chr7 (31-273)||(9785314-9785554)
chr7 (133-273)||(45482161-45482301)
chr7 (31-273)||(46025913-46026153)
chr7 (133-273)||(17509088-17509228)
chr7 (133-273)||(17543986-17544126)
chr7 (133-273)||(36253027-36253167)
chr7 (42-273)||(42644685-42644909)
chr7 (56-273)||(11833042-11833255)
chr7 (56-273)||(45457440-45457654)
chr7 (133-273)||(21990759-21990899)
chr7 (133-273)||(24320107-24320247)
chr7 (42-273)||(42603653-42603881)
chr7 (56-269)||(15674499-15674710)
chr7 (31-263)||(48304287-48304519)
chr7 (133-259)||(15017274-15017400)
chr7 (133-273)||(9719857-9719997)
chr7 (31-277)||(21954698-21954942)
chr7 (31-272)||(39532860-39533099)
chr7 (42-273)||(32740762-32740989)
chr7 (133-273)||(3266485-3266623)
chr7 (133-273)||(2622689-2622829)
chr7 (31-273)||(21603460-21603697)
chr7 (142-277)||(4621247-4621382)
chr7 (133-273)||(41288055-41288193)
chr7 (133-273)||(10574478-10574618)
chr7 (133-273)||(43847167-43847307)
chr7 (133-273)||(36719436-36719576)
chr7 (133-258)||(22747408-22747532)
chr7 (133-273)||(6667492-6667632)
chr7 (133-258)||(27050362-27050487)
chr7 (56-271)||(5684388-5684599)
chr7 (56-271)||(5709438-5709649)
chr7 (191-273)||(17473636-17473718)
chr7 (191-273)||(17579496-17579578)
chr7 (138-275)||(25531554-25531692)
chr7 (154-276)||(29352345-29352466)
chr7 (34-277)||(9136958-9137197)
chr7 (188-273)||(24988364-24988449)
chr7 (134-291)||(25112610-25112767)
chr7 (133-242)||(37375946-37376055)
chr7 (174-277)||(38276982-38277085)
chr7 (138-291)||(6495994-6496147)
chr7 (31-170)||(28664899-28665036)
chr7 (191-273)||(28664825-28664907)
chr7 (147-276)||(5238064-5238193)
chr7 (158-253)||(9137530-9137625)
chr7 (133-172)||(14657806-14657845)
chr7 (210-273)||(26161125-26161188)
chr7 (191-253)||(36579245-36579307)
chr7 (31-171)||(36579298-36579436)
chr7 (215-276)||(10623977-10624038)
chr7 (42-95)||(27535465-27535518)
chr7 (133-194)||(33476615-33476676)
chr7 (190-250)||(37593273-37593333)
chr7 (149-273)||(40761701-40761825)
chr7 (153-278)||(39707400-39707526)
chr7 (133-183)||(17473697-17473747)
chr7 (133-183)||(17579467-17579517)
chr7 (133-183)||(26161077-26161127)
chr7 (228-273)||(44482757-44482802)
chr7 (30-122)||(17221661-17221752)
chr7 (210-258)||(27535602-27535650)
[»] chr5 (52 HSPs)
chr5 (133-273)||(18653879-18654019)
chr5 (35-273)||(39179712-39179947)
chr5 (42-273)||(3740367-3740594)
chr5 (31-273)||(6281041-6281281)
chr5 (31-273)||(28040626-28040866)
chr5 (56-273)||(33164352-33164566)
chr5 (31-273)||(34431057-34431295)
chr5 (133-273)||(7771705-7771845)
chr5 (31-273)||(17331325-17331565)
chr5 (133-263)||(12891773-12891903)
chr5 (40-278)||(17687212-17687447)
chr5 (133-273)||(11734703-11734843)
chr5 (133-273)||(32347598-32347738)
chr5 (31-273)||(17699550-17699790)
chr5 (133-273)||(23428349-23428489)
chr5 (133-276)||(12215232-12215372)
chr5 (133-276)||(32309260-32309404)
chr5 (133-273)||(17096125-17096263)
chr5 (136-273)||(26294941-26295078)
chr5 (133-273)||(177988-178130)
chr5 (133-273)||(2555234-2555374)
chr5 (149-273)||(17732270-17732394)
chr5 (133-273)||(20483283-20483423)
chr5 (133-273)||(23882000-23882140)
chr5 (31-273)||(27241061-27241301)
chr5 (133-273)||(29097886-29098026)
chr5 (31-273)||(6635246-6635485)
chr5 (155-273)||(43493979-43494097)
chr5 (151-276)||(25962034-25962159)
chr5 (133-258)||(42396411-42396536)
chr5 (174-278)||(39915631-39915735)
chr5 (133-277)||(35275866-35276012)
chr5 (133-273)||(6681760-6681900)
chr5 (156-276)||(14535018-14535138)
chr5 (133-273)||(42609241-42609381)
chr5 (187-273)||(980913-980999)
chr5 (174-263)||(11858048-11858137)
chr5 (162-276)||(17523403-17523518)
chr5 (149-272)||(39531295-39531418)
chr5 (69-277)||(7150852-7151052)
chr5 (133-258)||(35402132-35402257)
chr5 (57-112)||(39915581-39915635)
chr5 (56-122)||(26905671-26905737)
chr5 (56-122)||(43493895-43493960)
chr5 (146-243)||(18573429-18573526)
chr5 (133-278)||(25487705-25487850)
chr5 (210-269)||(12439551-12439610)
chr5 (191-273)||(3079218-3079300)
chr5 (151-272)||(374397-374518)
chr5 (215-276)||(39415535-39415596)
chr5 (31-122)||(9196901-9196993)
chr5 (177-273)||(26240562-26240658)
[»] chr4 (67 HSPs)
chr4 (31-273)||(13965557-13965797)
chr4 (31-273)||(43244265-43244505)
chr4 (31-273)||(44756926-44757166)
chr4 (31-277)||(12716997-12717241)
chr4 (31-273)||(20399787-20400027)
chr4 (31-273)||(394158-394398)
chr4 (42-273)||(7060333-7060560)
chr4 (31-273)||(29268661-29268901)
chr4 (133-269)||(38944036-38944172)
chr4 (42-273)||(7083696-7083928)
chr4 (59-273)||(24825675-24825886)
chr4 (56-273)||(22757117-22757331)
chr4 (133-258)||(43493186-43493311)
chr4 (133-273)||(477896-478036)
chr4 (42-273)||(6881965-6882193)
chr4 (133-277)||(8712627-8712771)
chr4 (31-277)||(22049284-22049528)
chr4 (31-273)||(26742347-26742587)
chr4 (133-273)||(20887641-20887780)
chr4 (42-273)||(51152134-51152361)
chr4 (31-273)||(626434-626671)
chr4 (133-273)||(29922934-29923072)
chr4 (133-273)||(7861090-7861230)
chr4 (133-273)||(13586124-13586264)
chr4 (133-273)||(28837162-28837302)
chr4 (133-242)||(11210228-11210337)
chr4 (30-273)||(24568597-24568838)
chr4 (57-269)||(25658191-25658400)
chr4 (133-273)||(36124232-36124373)
chr4 (133-258)||(45350969-45351094)
chr4 (133-258)||(45360448-45360573)
chr4 (133-273)||(26674469-26674609)
chr4 (133-273)||(27394927-27395067)
chr4 (133-273)||(30202135-30202275)
chr4 (133-273)||(50801314-50801454)
chr4 (133-276)||(22121543-22121686)
chr4 (133-277)||(5814444-5814587)
chr4 (133-273)||(6911777-6911917)
chr4 (133-273)||(19745487-19745626)
chr4 (133-273)||(19794180-19794319)
chr4 (133-273)||(24611684-24611823)
chr4 (133-273)||(42197651-42197790)
chr4 (133-272)||(55600422-55600561)
chr4 (57-273)||(39523433-39523647)
chr4 (31-273)||(39837591-39837832)
chr4 (133-272)||(2447897-2448036)
chr4 (42-273)||(24100148-24100377)
chr4 (65-263)||(8517350-8517545)
chr4 (156-277)||(56236702-56236823)
chr4 (64-278)||(27090755-27090965)
chr4 (133-242)||(40198460-40198569)
chr4 (174-273)||(53647770-53647869)
chr4 (157-273)||(31522066-31522183)
chr4 (192-273)||(32616743-32616824)
chr4 (148-276)||(24789302-24789429)
chr4 (148-276)||(24818830-24818957)
chr4 (159-278)||(7454749-7454868)
chr4 (194-272)||(3159152-3159230)
chr4 (148-274)||(13169324-13169450)
chr4 (133-258)||(12754261-12754385)
chr4 (215-278)||(22621610-22621673)
chr4 (31-122)||(29235299-29235390)
chr4 (190-273)||(43278088-43278171)
chr4 (191-242)||(56171999-56172050)
chr4 (177-258)||(6082323-6082404)
chr4 (42-95)||(31521991-31522044)
chr4 (31-122)||(39797863-39797955)
[»] chr8 (52 HSPs)
chr8 (133-273)||(31407640-31407780)
chr8 (42-270)||(2234365-2234590)
chr8 (42-273)||(12329635-12329864)
chr8 (133-273)||(4757262-4757402)
chr8 (133-273)||(7579747-7579887)
chr8 (31-273)||(24791060-24791300)
chr8 (151-276)||(32778846-32778972)
chr8 (31-271)||(41361729-41361967)
chr8 (42-273)||(9501598-9501823)
chr8 (42-270)||(10338717-10338942)
chr8 (42-245)||(1039814-1040013)
chr8 (33-258)||(30026789-30027010)
chr8 (133-272)||(28297000-28297138)
chr8 (59-273)||(31308174-31308385)
chr8 (137-250)||(22787593-22787706)
chr8 (133-278)||(24699929-24700074)
chr8 (156-273)||(43937069-43937186)
chr8 (138-273)||(10148049-10148182)
chr8 (31-273)||(14600590-14600830)
chr8 (59-277)||(2968557-2968773)
chr8 (31-273)||(11161879-11162120)
chr8 (57-273)||(39067581-39067794)
chr8 (31-273)||(31202455-31202695)
chr8 (133-273)||(37612750-37612890)
chr8 (56-270)||(37128382-37128592)
chr8 (133-277)||(10334272-10334417)
chr8 (153-277)||(13576082-13576206)
chr8 (31-105)||(30039389-30039463)
chr8 (155-273)||(1810114-1810232)
chr8 (56-198)||(3204723-3204862)
chr8 (210-273)||(2025116-2025179)
chr8 (158-258)||(13570646-13570748)
chr8 (213-276)||(19489006-19489069)
chr8 (59-183)||(2025191-2025312)
chr8 (40-258)||(4927978-4928192)
chr8 (156-272)||(10633074-10633187)
chr8 (147-212)||(12832287-12832351)
chr8 (148-205)||(15288754-15288811)
chr8 (148-205)||(15469123-15469180)
chr8 (158-278)||(4429183-4429303)
chr8 (186-258)||(19720159-19720231)
chr8 (42-97)||(7281654-7281709)
chr8 (191-277)||(6219984-6220070)
chr8 (42-122)||(23971135-23971214)
chr8 (173-239)||(12111278-12111344)
chr8 (174-256)||(24210379-24210461)
chr8 (133-163)||(30039339-30039369)
chr8 (44-121)||(32778992-32779069)
chr8 (191-263)||(3204687-3204759)
chr8 (233-273)||(23971075-23971115)
chr8 (59-95)||(28297175-28297211)
chr8 (147-275)||(35778968-35779096)
[»] chr1 (57 HSPs)
chr1 (43-273)||(44517157-44517384)
chr1 (42-273)||(3232797-3233025)
chr1 (133-273)||(28678014-28678154)
chr1 (31-273)||(29205282-29205522)
chr1 (33-273)||(42276356-42276592)
chr1 (31-277)||(12871618-12871862)
chr1 (133-273)||(14265381-14265521)
chr1 (133-273)||(29726481-29726620)
chr1 (42-291)||(42490902-42491148)
chr1 (31-273)||(7995444-7995684)
chr1 (77-273)||(15391136-15391329)
chr1 (133-273)||(13488420-13488560)
chr1 (31-273)||(33486914-33487154)
chr1 (31-250)||(20411570-20411786)
chr1 (31-273)||(424175-424415)
chr1 (133-273)||(17347694-17347834)
chr1 (133-273)||(45750575-45750715)
chr1 (133-273)||(10627097-10627236)
chr1 (133-277)||(25032968-25033112)
chr1 (31-273)||(37822230-37822469)
chr1 (133-272)||(4882244-4882383)
chr1 (133-278)||(47551194-47551337)
chr1 (133-273)||(15791159-15791299)
chr1 (133-277)||(32878805-32878949)
chr1 (31-222)||(33125740-33125929)
chr1 (133-278)||(29069720-29069866)
chr1 (151-276)||(28399210-28399335)
chr1 (152-277)||(9298296-9298423)
chr1 (149-273)||(18343726-18343849)
chr1 (133-273)||(33938897-33939037)
chr1 (133-275)||(24114561-24114703)
chr1 (133-254)||(27534796-27534915)
chr1 (149-277)||(13999079-13999207)
chr1 (138-275)||(25689723-25689862)
chr1 (146-276)||(26097886-26098014)
chr1 (152-273)||(45193512-45193631)
chr1 (156-277)||(29938358-29938478)
chr1 (177-273)||(4870917-4871013)
chr1 (69-273)||(13869674-13869874)
chr1 (210-273)||(51418158-51418221)
chr1 (175-256)||(32301477-32301558)
chr1 (191-270)||(32784234-32784313)
chr1 (147-276)||(29551630-29551760)
chr1 (133-270)||(8737448-8737584)
chr1 (133-276)||(2513481-2513627)
chr1 (177-272)||(38783208-38783303)
chr1 (133-273)||(45425359-45425496)
chr1 (188-276)||(50107794-50107884)
chr1 (135-277)||(40862699-40862840)
chr1 (133-183)||(51418110-51418160)
chr1 (31-170)||(32784105-32784242)
chr1 (151-239)||(34335006-34335094)
chr1 (31-70)||(25033169-25033208)
chr1 (186-276)||(10304728-10304818)
chr1 (214-276)||(31427031-31427093)
chr1 (232-277)||(13152636-13152681)
chr1 (177-277)||(30678396-30678496)
[»] scaffold0121 (1 HSPs)
scaffold0121 (133-273)||(13129-13269)
[»] scaffold0056 (1 HSPs)
scaffold0056 (31-273)||(74161-74401)
[»] scaffold1379 (2 HSPs)
scaffold1379 (133-258)||(72-197)
scaffold1379 (31-277)||(963-1210)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-277)||(7004-7245)
[»] scaffold0294 (1 HSPs)
scaffold0294 (133-272)||(3952-4091)
[»] scaffold0312 (1 HSPs)
scaffold0312 (31-273)||(6134-6374)
[»] scaffold1350 (1 HSPs)
scaffold1350 (133-273)||(1671-1811)
[»] scaffold0536 (1 HSPs)
scaffold0536 (133-273)||(2999-3137)
[»] scaffold0155 (1 HSPs)
scaffold0155 (31-263)||(35079-35311)
[»] scaffold0001 (1 HSPs)
scaffold0001 (133-278)||(404134-404282)
[»] scaffold0886 (1 HSPs)
scaffold0886 (151-272)||(3626-3747)
[»] scaffold0999 (1 HSPs)
scaffold0999 (232-277)||(1900-1945)
[»] scaffold0007 (1 HSPs)
scaffold0007 (42-121)||(202084-202162)
[»] scaffold0238 (1 HSPs)
scaffold0238 (43-120)||(15713-15789)


Alignment Details
Target: chr3 (Bit Score: 172; Significance: 2e-92; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 30 - 294
Target Start/End: Complemental strand, 39429633 - 39429372
Alignment:
Q  30 gaattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgtttt-cagtcttctttcgtttgnnnnnn 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||          
T  39429633 gaattttgacccaaaatcacccatctgaattgtttttccttcttttctaattgaacaagtgctttccacatgtttttcagtcttctttcgtttgtttttt 39429534  T
Q  129 nnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcc 228  Q
        ||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| || || ||||||||||||||      
T  39429533 tg--atttcgtcgtctctgcacgactctgtttgttttaatttcttgtctttgtgca--gtgtttttgatttcccatcttagtgtggtgtttatttaattt 39429438  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttgaaaccgtcaatgtttca 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  39429437 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttgaaatcgtcaacgtttca 39429372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 31270323 - 31270563
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||| ||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||           
T  31270323 aattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttc-acatattttatgttttctttcgtttgtttttgt 31270421  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||  || ||    
T  31270422 a--atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttattcgattca 31270519  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||| | |||| |||||||||    
T  31270520 ggttgaaagattagctttgagcaagtgtagatccgatcaatgac 31270563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 40013407 - 40013164
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttct---aattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnn 126  Q
    ||||||||||||||| ||||||||| ||||||||||||||||| | ||   ||||||||||||| |||| |||| ||||| || ||||||||||||        
T  40013407 aattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttt 40013309  T
Q  127 nnnnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaat 226  Q
          ||||||||||||||| || |||| ||||||||||||||   ||||||| ||  |||||||||||||||||||| || |||||||||||||| ||    
T  40013308 tgtg--atttcgtcgtctctgaacaactccgtttgttttgatttaccgtctttgcgcggtgtgtttttgatttcccatcttagtgcggtgtttatttgat 40013211  T
Q  227 ccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     |||||||||||||||||| |||||||||||| || |||||||||||    
T  40013210 tcaggttgaaagattagctttgagcaagtgcagattcaatcaatgac 40013164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 14585459 - 14585699
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||| | | | |||||||||||||||| | ||||||||||||||| |||| |||| ||||| || |||||| |||||           
T  14585459 aattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttc-acatattttctgttttcttttgtttgtttttgt 14585557  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||| ||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  14585558 g--atttcctcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 14585655  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| |||| |||||||||||| |||| |||||||||    
T  14585656 ggttgaaagatcagctttgagcaagtgcagatccgatcaatgac 14585699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 53402718 - 53402858
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||||| ||||||||||||||||  |||||||||| |||||||||||||||||| || || |||| ||||||||| || |||||    
T  53402718 atttcatcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttcccgtcttagtgcgctgtttatttgattcaggt 53402817  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  53402818 tgaaagattagctttgagcaagtgcaaatccgatcaatgac 53402858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 36624814 - 36624587
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    ||||||||||||  ||||||||||||||||| | |||| | |||||||| |||| |||| ||||| || |||||| |||||          |||||||||    
T  36624814 aaaatcacccatccgaattgtttttccttctatcctaactaaataagtgatttc-acatattttctgttttcttttgtttgtttttgtg--atttcgtcg 36624718  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| ||||||||||| |||||||||||  ||||||||||| ||| ||||||||||||| || || |||||||||||||| || ||||||||||||||    
T  36624717 tctctgaacgactctgtt-gttttgatttcccgtctttgtgcagtgtctttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatt 36624619  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| | |||||||||| |||| |||||||||    
T  36624618 agctttaagcaagtgcagatccgatcaatgac 36624587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 133 - 276
Target Start/End: Complemental strand, 106067 - 105924
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||||||||||||||||||| |||||||||   |||||||||| |||||||||| ||||||| || || ||  |||||||||| || |||||    
T  106067 attttgtcgtctctgcacgactctgtttattttgattttccgtctttgtgcgatgtgttttttatttcccgtcttagtgtcgtgtttatttgattcaggt 105968  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  105967 tgaaagattagctttgagcaagtgcaaatccgatcaatgacttt 105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 58 - 273
Target Start/End: Original strand, 22484990 - 22485202
Alignment:
Q  58 attgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctg 157  Q
    ||||||||||||||| | ||||||||||||||| ||||  ||| ||||| || ||||||||||||          |||||||| ||| || |||||||||    
T  22484990 attgtttttccttctatcctaattgaataagtgatttcg-catattttctgttttctttcgtttgtttttgtg--atttcgtcatctttgaacgactctg 22485086  T
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgc 257  Q
    ||||||||||||||  ||||||||||  |||||||||||||| || || || |||||||||||||| || |||||||||||||||||| |||||||||||    
T  22485087 tttgttttgatttcccgtctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgc 22485186  T
Q  258 aaatccaatcaatgac 273  Q
    | ||||  ||||||||    
T  22485187 agatccggtcaatgac 22485202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 258
Target Start/End: Original strand, 35174713 - 35174930
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  35174713 aaaatcacccctttgaattgtttttccttctatcctaattgaataagtgatttc-acatattttttgttttctttcgtttgtttttgtg--atttcgtcg 35174809  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtcttt----gtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    |||||| |||||||||||||||||||||||   |||||    ||||  |||||||||| |||||| || || |||||||||||||| || ||||||||||    
T  35174810 tctctgaacgactctgtttgttttgatttcccatctttatttgtgcgttgtgtttttgctttcccgtcttagtgcggtgtttatttgattcaggttgaaa 35174909  T
Q  238 gattagctctgagcaagtgca 258  Q
    |||||||| ||||||||||||    
T  35174910 gattagctttgagcaagtgca 35174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 53155562 - 53155322
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||| ||||||||||||||| | | |||||| |||||||| |||| |||| ||||  || ||||||||||||           
T  53155562 aattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttc-acatattttatgttttctttcgtttgtttttgt 53155464  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||| | || ||||||||||||||||| |||||  |||||||||   || ||||||||||| || || || ||| |||||||||| || ||    
T  53155463 a--atttcgtcgtatttgaacgactctgtttgttttaatttcccgtctttgtgtggtgcgtttttgattttccgtcttagtgcagtgtttatttgattca 53155366  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  53155365 ggttgaaagattagctttgagcaagtgcaaatccgatcaatgac 53155322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 1075025 - 1074786
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  || |||||||||||| | ||||||||||||||||| ||  |||| |||||| || ||||||||||||           
T  1075025 aattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt--cacacgttttctgttttctttcgtttgttttcgt 1074928  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| |||||||||  |||||||||||| |||||||||   ||||||||||  ||||||||||||||||| || || ||  ||| |||||| || ||    
T  1074927 g--attttgtcgtctcttaacgactctgtttcttttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgtagtgattatttgattca 1074830  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     ||||||||||||||| ||||||||||||||||| |||||||||    
T  1074829 agttgaaagattagctttgagcaagtgcaaatccgatcaatgac 1074786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 31462878 - 31462638
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||||||||||||| | | ||||||||||||||| |||  |||| ||||| || |||||| |||||           
T  31462878 aattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttt-acatattttctgttttcttttgtttgtttttgt 31462780  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| ||||||||||||||||||||||   | ||||||||  ||||||||| |||| |  || || ||||| |||||||| || ||    
T  31462779 g--atttcgtcgtctctgaacgactctgtttgttttgattttccgactttgtgcggtgtgttttttatttacggtcttagtgcggcgtttatttgattca 31462682  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  31462681 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 31462638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 54239138 - 54238912
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||| |||  ||||||||||||||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||          |||||||||    
T  54239138 aaaatcacacatccgaattgtttttccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcg 54239042  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    ||  || |||||| ||||||||||||||||  || |||||||  ||||||||||||||||| || || |||||||  ||||| || ||||||||||||||    
T  54239041 tcgatgaacgactttgtttgttttgatttcccgtgtttgtgcggtgtgtttttgatttcccgtcttagtgcggtg--tatttgattcaggttgaaagatt 54238944  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    || | |||||||||||| |||| |||||||||    
T  54238943 agatttgagcaagtgcatatccgatcaatgac 54238912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 32080786 - 32080646
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||| | ||||| |||| ||||||||| || ||| |    
T  32080786 attttgtcgtctctgaacgactctgtttgttttgatttcacgtctttgtgcagtgtgtttttgatttctcgtcatagtgcgatgtttatttgattcagct 32080687  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||||||| ||| |||| ||| |||| |||||||||    
T  32080686 tgaatgattagctttgaacaagagcagatccgatcaatgac 32080646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 40884001 - 40883758
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgttttt-ccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnn 128  Q
    ||||||||||||||| ||| | ||| ||||||||||| |||| | | ||||||||||||||| |||| || | ||||| || ||||||||||||          
T  40884001 aattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttc-acttattttctgttttctttcgtttgtttttg 40883903  T
Q  129 nnnnatttcgtcgtctctgcacgactct--gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaat 226  Q
        |||||||||| |||| ||||||||  |||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||| ||| ||    
T  40883902 tg--atttcgtcgtttctgaacgactctctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttctttgat 40883805  T
Q  227 ccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     |||||||||||||||| | |||||||||||| |||| |||||||||    
T  40883804 tcaggttgaaagattagttttgagcaagtgcagatccgatcaatgac 40883758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 11819180 - 11819317
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||||   ||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  11819180 atttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 11819279  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaat 270  Q
    ||||||||||||| ||| || | ||| |||| ||||||    
T  11819280 tgaaagattagctttgaacaggagcatatccgatcaat 11819317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 55454966 - 55455102
Alignment:
Q  136 tcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttga 235  Q
    |||||||||||  |||||||||||||||||||||||   |||||||||  ||||||||| ||||||  || || |||||||||||||| || ||||||||    
T  55454966 tcgtcgtctctaaacgactctgtttgttttgatttcccttctttgtgcggtgtgttttttatttccg-tcttagtgcggtgtttatttgattcaggttga 55455064  T
Q  236 aagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| |||||||||||| |||| |||||||||    
T  55455065 aagattagctttgagcaagtgcagatccgatcaatgac 55455102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 36691931 - 36691691
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || || ||||||||||| | ||||||||||||||| |||| |||| ||||| || | ||||||||||           
T  36691931 aattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttc-acatattttctgtttcctttcgtttgtttttgt 36691833  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||| ||||||||||||||||  |||||| |||  ||||||||| |||| || || || | |||||||||||| |||||    
T  36691832 g--atttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcggtgtgttttttattttccgtcttagtacggtgtttatttgatcca 36691735  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || || ||||||||| || | |||||||||    
T  36691734 ggttgaaagattaactttgcgcaagtgcatattcgatcaatgac 36691691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 33637500 - 33637639
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  |||||| ||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| ||  ||||    
T  33637500 atttcgtcgtctctaaacgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgatttaggt 33637599  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||||| ||| |||  ||| |||| ||||||||    
T  33637600 tgaaagattagctttgaacaaaagcagatccgatcaatga 33637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 200
Target Start/End: Original strand, 2147756 - 2147891
Alignment:
Q  63 ttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgt 162  Q
    ||||| |||| | ||||||||||||||| ||||||||| |||||||| ||||||| ||||          ||||||||||||||||||||||||||||||    
T  2147756 ttttcgttctatcctaattgaataagtgatttccacatattttcagttttctttcatttgtttttgtg--atttcgtcgtctctgcacgactctgtttgt 2147853  T
Q  163 tttgatttcttgtctttgtgcaatgtgtttttgatttc 200  Q
    |||||||||| ||||||| ||| |||||||||||||||    
T  2147854 tttgatttctcgtctttgagcagtgtgtttttgatttc 2147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 30156313 - 30156176
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| |||||| ||||||||||||||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| || | |||    
T  30156313 atttcgtcttctctgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattctggt 30156214  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaat 270  Q
    ||||| ||||||| ||||||||| || |||| ||||||    
T  30156213 tgaaaaattagctttgagcaagttcagatccgatcaat 30156176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 223
Target Start/End: Complemental strand, 55090611 - 55090525
Alignment:
Q  137 cgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttattt 223  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||  |||||||||||||||||||| || ||||||||||||||    
T  55090611 cgtcgtctctgaacgactttgtttgttttgatttcctgtctttgtgcggtgtgtttttgatttcccatcttagtgcggtgtttattt 55090525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 273
Target Start/End: Original strand, 48854977 - 48855114
Alignment:
Q  136 tcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttga 235  Q
    |||||||||||| |||||||||| |||||||||||   ||||||||||  || |||||| |||| || || || || ||||||||||| || || |||||    
T  48854977 tcgtcgtctctgaacgactctgtatgttttgattttccgtctttgtgcggtgcgttttttattttccgtcttagtgtggtgtttatttgattcatgttga 48855076  T
Q  236 aagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| |||||||||||| |||| |||||||||    
T  48855077 aagattagctttgagcaagtgcagatccgatcaatgac 48855114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 49628104 - 49627987
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    |||||||||||||||   |||||| |||  ||||||||||||||||| || || |||||||||||||| || |||||||||||||||||| | |||||||    
T  49628104 tgtttgttttgattttccgtctttatgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagcttttagcaagt 49628005  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  49628004 gcagatccgatcaatgac 49627987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 34 - 272
Target Start/End: Complemental strand, 48652569 - 48652333
Alignment:
Q  34 tttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnn 132  Q
    |||||||||||| |||||| |  || ||||||||||||||    |||||||||||||| |||| |||| ||||| || ||||||||||||              
T  48652569 tttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg-- 48652473  T
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  |||||| |||||||||||||||   ||||||||||  ||||||||| ||||||| || || |||||||||||||| ||  ||||    
T  48652472 atttcgtcgtctctaaacgactttgtttgttttgattttccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgatttaggt 48652373  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    |||||||||| || ||| |||| ||| |||| ||||||||    
T  48652372 tgaaagattaactttgaacaagagcagatccgatcaatga 48652333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 273
Target Start/End: Original strand, 3457065 - 3457176
Alignment:
Q  162 ttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaat 261  Q
    ||||||||||  ||||||||||  ||||||||| ||||||| || || | |||||||||||| || || ||||||||||||||| |||||||||||||||    
T  3457065 ttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtacggtgtttatttgattcaagttgaaagattagctttgagcaagtgcaaat 3457164  T
Q  262 ccaatcaatgac 273  Q
    || |||||||||    
T  3457165 ccgatcaatgac 3457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 273
Target Start/End: Complemental strand, 54706705 - 54706607
Alignment:
Q  175 tctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||  ||||||||||||||||| || || |||||||||||||| || ||||||||||||||| || |||||||||||| |||| |||||||||    
T  54706705 tctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattacctttgagcaagtgcagatccgatcaatgac 54706607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 53962214 - 53962360
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||| ||| |||||||| || |||| ||||||||   ||||| ||||  | ||||| |||||||||| || || |||||||||||||| || ||||    
T  53962214 atttcgtcatctttgcacgaccctttttgatttgattttccgtcttcgtgcggtttgtttgttgatttcccgtcttagtgcggtgtttatttgattcagg 53962313  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    || ||||||||||| |||||||||||| ||||||||| ||| |||||    
T  53962314 ttaaaagattagctttgagcaagtgcagatccaatcattgattttga 53962360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 277
Target Start/End: Complemental strand, 3961779 - 3961650
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttc-ccatcataatgcggtgtttatttaatccaggttgaaagattagctct 247  Q
    |||||||||||||||||||||| | |||||||||  |||||||||| ||||  || || || |||||||||||||| || ||||||| ||||||| || |    
T  3961779 acgactctgtttgttttgatttatcgtctttgtgtgatgtgttttttatttttccgtcttagtgcggtgtttatttgattcaggttgtaagattaacttt 3961680  T
Q  248 gagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||| || | || |||||||||||||||    
T  3961679 gagcaaatgtagattcaatcaatgactttg 3961650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 19861311 - 19861171
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  ||||||||||||||||||||| || |||||||||   ||||||||| ||||||  || || |||  |||||| || || |||||    
T  19861311 atttcgtcgtctcttaacgactctgtttgttttgattcctcgtctttgtgtggtgtgttttttatttccagtcttagtgcaatgtttacttgattcaggt 19861212  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| |||| || |||||||||||| || | |||||||||    
T  19861211 tgaaatattaactttgagcaagtgcatattcgatcaatgac 19861171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 13701975 - 13701893
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || || |||||||||||||| || || ||||||||||||||| ||||||||||||||||  |||||||||    
T  13701975 ttttgatttcccgtcctagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcaaatctgatcaatgac 13701893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 39610309 - 39610447
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||| || | |||||||||||||||||||||  ||||||||||  |||||||  |||||| | || || | || ||||||||| ||  || |    
T  39610309 attttgtcgtctttgaatgactctgtttgttttgatttcccgtctttgtgcggtgtgttt--gatttctcgtcttagtacgttgtttatttgatttagat 39610406  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  39610407 tgaaagattagctttgagcaagtgcagatccgatcaatgac 39610447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 137 - 277
Target Start/End: Original strand, 48212440 - 48212581
Alignment:
Q  137 cgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttga-tttcccatcataatgcggtgtttatttaatccaggttga 235  Q
    |||||| | ||||||||| | ||||||||||||||   ||||| |||| |||||||||   |||| | || || ||| |||||||||  || ||| ||||    
T  48212440 cgtcgtttttgcacgactttatttgttttgatttcccttctttatgcagtgtgtttttttctttctcgtcttagtgcagtgtttattagattcagattga 48212539  T
Q  236 aagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    | ||||||||||||||||||||| ||||||||||||||||||    
T  48212540 aggattagctctgagcaagtgcagatccaatcaatgactttg 48212581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 45047652 - 45047751
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  ||||||||||||||| |||  || |||||||||||||| || ||| |||||||||||||| | |||||||||| || | |||||||||    
T  45047652 gtctttgtgcggtgtgtttttgatttctcattttagtgcggtgtttattttattcagattgaaagattagcttttagcaagtgcagattcgatcaatgac 45047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 3312540 - 3312685
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttga-tttcccatcataatgcggtgtttatttaatccagg 231  Q
    ||||| || |||||||||||||| |||| ||||||||||  |||||||||   ||| ||||| | |||| | || |  |||||||||||||| || ||||    
T  3312540 atttcatcatctctgcacgactcagtttcttttgatttccagtctttgtgtggtgttttttttaatttctcgtcttcttgcggtgtttatttgattcagg 3312639  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||| ||||||| |||||||||| | |||| || ||||||||||    
T  3312640 ttgaaatattagctttgagcaagtgtagatcctattaatgactttg 3312685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 287
Target Start/End: Complemental strand, 25135318 - 25135189
Alignment:
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgc 257  Q
    |||||||||||||||  ||||||||  |||||||||| ||||  |||| || ||| |||||||| | || || ||||||| ||||| | |||||||||||    
T  25135318 tttgttttgatttctcatctttgtgtgatgtgttttttatttttcatcttagtgcagtgtttatctgattcaagttgaaatattagatttgagcaagtgc 25135219  T
Q  258 aaatccaatcaatgactttgaaaccgtcaa 287  Q
    |||  |||||||||| ||||| | ||||||    
T  25135218 aaaatcaatcaatgattttgacatcgtcaa 25135189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 278
Target Start/End: Complemental strand, 27189416 - 27189291
Alignment:
Q  154 tctgtttgttttgatttcttgtctttgtgcaatgtgtt-tttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagca 252  Q
    ||||||| |||||||||   ||||||||||  |||||| ||| ||||||| || |  |||||||||||||| || |||||||||||||||||| ||||||    
T  27189416 tctgtttattttgattttccgtctttgtgcggtgtgttattttatttcccgtcttggtgcggtgtttattttattcaggttgaaagattagctttgagca 27189317  T
Q  253 agtgcaaatccaatcaatgactttga 278  Q
    |||| | |||  ||||||||| ||||    
T  27189316 agtgtagatctgatcaatgacattga 27189291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 4206543 - 4206456
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttattt 223  Q
    ||||||||||||||| ||||||  |||| |||| ||||| |||||||||||  ||||||||||||||| |||| || ||||||||||||||    
T  4206543 atttcgtcgtctctgaacgact--gtttttttt-atttcctgtctttgtgcggtgtgtttttgatttctcatcttagtgcggtgtttattt 4206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 38527287 - 38527426
Alignment:
Q  57 aattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactct 156  Q
    |||||||||||||||| |  ||||||||||| || |||| |||| ||||| || ||||||||||||          ||||||||||||||| | ||||||    
T  38527287 aattgtttttccttctatcttaattgaataaatgatttc-acatattttctgttttctttcgtttgtttttatg--atttcgtcgtctctgaatgactct 38527383  T
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgattt 199  Q
    |||||||||||||||  |||||||||| | || ||||||||||    
T  38527384 gtttgttttgatttcccgtctttgtgcgacgtatttttgattt 38527426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 40716287 - 40716354
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttc 200  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||||||| || |||| ||||||||||    
T  40716287 atttcgtcgtctttgcacgactctattagttttgatttcatgtctttgttcagtgtgattttgatttc 40716354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 48401036 - 48401099
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| || |||||| ||||||||||| |||||||||||| |||| |||||||||    
T  48401036 tgcggtgtttatttgattcaggttaaaagattagctttgagcaagtgcagatccgatcaatgac 48401099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 40702546 - 40702648
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| |||||| ||||||| ||| |||||||||| |||  |||||||||||||||| ||||||||| || |  || ||| |||||||||| || |||||    
T  40702546 atttcatcgtctttgcacgattctatttgttttgacttcacgtctttgtgcaatgtgattttgattttccgttttagtgcagtgtttatttgattcaggt 40702645  T
Q  233 tga 235  Q
    |||    
T  40702646 tga 40702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 566287 - 566388
Alignment:
Q  175 tctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgact 274  Q
    |||||||||| ||||||||| ||||  | || ||||||| ||||||||| || |||||||||||| ||||| | | ||| |||| || ||||||||||||    
T  566287 tctttgtgcattgtgttttttatttgtcttcttaatgcgttgtttatttgattcaggttgaaagactagcttttatcaattgcagattcaatcaatgact 566386  T
Q  275 tt 276  Q
    ||    
T  566387 tt 566388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 24483810 - 24483571
Alignment:
Q  31 aattttgaccca-aaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||| || ||||||||||| ||||||||||||| |||| |  |||||||||||||| ||| ||||| ||||| || ||| | | ||||           
T  24483810 aattttgacacacaaatcacccatctgaattgtttttcattctatcataattgaataagtgattt-cacatattttctgttttcatacatttg--ttttt 24483714  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| |||||||||| ||||||||||||| ||||||||    ||||||| |  ||||||||| |||| ||||| || ||||   |||| || ||  |    
T  24483713 gtgattttgtcgtctctgaacgactctgtttg-tttgattttccatctttgtacggtgtgttttttattttccatcttagtgcgacatttacttgattta 24483615  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||| ||||||| |||||||||||| |||| |||||||||    
T  24483614 ggttgaaatattagctttgagcaagtgcagatccgatcaatgac 24483571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 34960990 - 34960899
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||||||||| |||||| |  ||||||||||| ||||| ||||||||||||||||| ||| ||||| ||||  || ||||||||||||    
T  34960990 aattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgattt-cacatattttatgttttctttcgtttg 34960899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 53402627 - 53402687
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtg 90  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| |||||||| ||||||||    
T  53402627 aattttgacccaaaaatcacccatccgaattgtttttccttctattctaattcaataagtg 53402687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 276
Target Start/End: Original strand, 2147882 - 2147996
Alignment:
Q  162 ttttgatttcttgtctttgtgcaatgtgtttttgattt-cccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaa 260  Q
    ||||||||||| ||||||||||  |||||||||||||| ||| || || |||||||||||||| || |  |||| ||||||| || |||||||||| | |    
T  2147882 ttttgatttctcgtctttgtgcggtgtgtttttgatttccccgtcttagtgcggtgtttatttgattcgagttg-aagattatctttgagcaagtgtaga 2147980  T
Q  261 tccaatcaatgacttt 276  Q
    ||  ||||||||||||    
T  2147981 tctgatcaatgacttt 2147996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 267
Target Start/End: Complemental strand, 42168030 - 42167911
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctct 247  Q
    ||||||| ||||| ||||||||| | |||| ||||| ||| |||||| ||||| |||| || || ||||||||||| || ||| |||||||||| ||| |    
T  42168030 cacgactttgtttattttgatttttcgtctctgtgcgatgagttttttatttctcatcttagtgtggtgtttatttgattcagattgaaagatttgcttt 42167931  T
Q  248 gagcaagtgcaaatccaatc 267  Q
     | |||||||| || |||||    
T  42167930 aatcaagtgcagattcaatc 42167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 47733832 - 47733765
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||||||||| || |||||||||| ||||| | ||||||| |||| || |||||||||||||||    
T  47733832 tgcggtgtttatttgattcaggttgaaatattagttttgagcaaatgcatattcaatcaatgactttg 47733765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 55446231 - 55446294
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| |||||||| || ||| ||||| |||||||| |||||||||||| ||||||||||||||    
T  55446231 tgcggggtttatttgattcagattgaaggattagctttgagcaagtgcagatccaatcaatgac 55446294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 276
Target Start/End: Original strand, 550344 - 550446
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| ||| ||||||||||| | || ||||| | ||||||||| || ||| |||||| ||||||| | | ||| |||| || |||||||||||    
T  550344 gtctttgtgcactgtttttttgatttctcttcttaatgtgttgtttatttgattcagattgaaatattagctttcatcaattgcatattcaatcaatgac 550443  T
Q  274 ttt 276  Q
    |||    
T  550444 ttt 550446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 19645374 - 19645428
Alignment:
Q  219 tatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| || |||||||||||||||||| |||||||||||| |||| |||||||||    
T  19645374 tatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 19645428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 277
Target Start/End: Original strand, 31730759 - 31730885
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    |||| ||||||||||||||||| ||||| || | |||||| ||| || | |  || || |||  ||||||||| || || |||||||||||| || |||     
T  31730759 gactttgtttgttttgatttctcgtcttcgtacgatgtgtcttttatatactgtcttagtgcaatgtttatttgattcaagttgaaagattaactttgaa 31730858  T
Q  251 caagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||| |||||| ||||||    
T  31730859 caagtgcaaatccgatcaataactttg 31730885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 34103720 - 34103640
Alignment:
Q  192 tttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| |  || |||||||||||||| || ||||| |||||||||| | |||||||||||| |||| |||||||||    
T  34103720 tttgatttcccgttttagtgcggtgtttatttgattcaggtcgaaagattagat-tgagcaagtgcagatccgatcaatgac 34103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 243
Target Start/End: Original strand, 37451877 - 37451945
Alignment:
Q  175 tctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattag 243  Q
    |||||||||  |||| ||||||||| ||||| || |||||||||||||| || |||||||||| |||||    
T  37451877 tctttgtgcggtgtgcttttgattttccatcttagtgcggtgtttatttgattcaggttgaaaaattag 37451945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 49628207 - 49628128
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||| | |||||||||||||||||| | ||| ||||||||||| ||| ||||| ||||  || ||||||||||||    
T  49628207 aaaatcacccctctgaattgtttttccttctatcctagttgaataagtgattt-cacatattttttgttttctttcgtttg 49628128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 31348567 - 31348702
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    |||||||| |||||||| ||  ||||  | ||| || |||||||  |||| |||||| ||||||| || ||  ||||||||| ||||||| ||| |||||    
T  31348567 tgtttgttatgatttctcgttgttgtatagtgttttcttgatttttcatcttaatgcagtgtttaattgatttaggttgaaaaattagctttgatcaagt 31348666  T
Q  256 gcaaatccaatcaatgactttgaaaccgtcaatgtt 291  Q
     || ||| ||||||||||||||  ||| ||||||||    
T  31348667 ccagatctaatcaatgactttggcaccatcaatgtt 31348702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 41868415 - 41868276
Alignment:
Q  42 aaaatcacccatttgaattgttttt-ccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtc 140  Q
    |||||||| ||| ||| |||||||| |||||| | ||||||||||||||| ||| ||||| ||||| || ||||||||||||          ||||||||    
T  41868415 aaaatcactcatctgagttgttttttccttctatcctaattgaataagtgattt-cacatattttctgttttctttcgtttg--cttttgtgatttcgtc 41868319  T
Q  141 gtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    ||||||  |||||||| |||||||||||||   ||||||||||    
T  41868318 gtctctaaacgactctatttgttttgattttccgtctttgtgc 41868276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 205
Target Start/End: Original strand, 534092 - 534146
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc 205  Q
    |||||||||| ||||||||||| ||||||||||  ||||||||| ||||| ||||    
T  534092 gactctgtttattttgatttctcgtctttgtgcggtgtgttttttatttctcatc 534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 4817875 - 4817809
Alignment:
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttattt 223  Q
    |||||||||||||||  ||||||||||| ||||||||| ||||||  || || ||| ||||||||||    
T  4817875 gtttgttttgatttcccgtctttgtgcagtgtgttttttatttcctctcttagtgcagtgtttattt 4817809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 19645322 - 19645356
Alignment:
Q  137 cgtcgtctctgcacgactctgtttgttttgatttc 171  Q
    ||||||||||| |||||||||||||||||||||||    
T  19645322 cgtcgtctctgaacgactctgtttgttttgatttc 19645356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 34960872 - 34960807
Alignment:
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttattt 223  Q
    ||||||||||||||| ||||||||||  ||| | ||||||||||  || || ||||||||||||||    
T  34960872 tttgttttgatttctcgtctttgtgcggtgtttatttgatttcctgtcttagtgcggtgtttattt 34960807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 38528664 - 38528709
Alignment:
Q  213 ggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    ||||||||||  ||||||||||||||||||||| ||| ||||||||    
T  38528664 ggtgtttattagatccaggttgaaagattagctttgaacaagtgca 38528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 41868260 - 41868215
Alignment:
Q  228 caggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| | |||||||||||| |||| |||||||||    
T  41868260 caggttgaaagattagttttgagcaagtgcagatccgatcaatgac 41868215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 4219179 - 4219268
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||||  ||||||| |||  ||||||| |||||||| |||  | || |||||||| ||| ||||| |||||||| ||||||||||||    
T  4219179 aattttgacctgaaatcactcatccgaattgtatttccttccttt--agttaaataagtgattttcacatattttcagttttctttcgtttg 4219268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 13702104 - 13702013
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||||||||| |||||| || ||||| |||||| |||| |  |||||||||||||| ||| ||||| ||||| || ||||||| ||||    
T  13702104 aattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgattt-cacatattttctgttttctttcatttg 13702013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 24520734 - 24520782
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgt 181  Q
    |||||||||||| || |||||||| ||| |||||||||| |||||||||    
T  24520734 atttcgtcgtctttggacgactctatttattttgatttcatgtctttgt 24520782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 4921905 - 4921761
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||| || || |||||||||||||| ||||||||    
T  4921905 attttgtcgtctctgcacgactctatttgttttgatttcccgtctttgtgcgatgtgtttttgatttcccgtcttactgcggtgtttatttgatccaggt 4921806  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  4921805 tgaaagattagctttgagcaagtgcagatccgatcaatgactttg 4921761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 23654347 - 23654487
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||   ||||||||||||||||| || || |||||||||||||| || |||||    
T  23654347 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgtggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggt 23654446  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||| ||| |||| |||||||||    
T  23654447 tgaaagattagctttgaacaagagcagatccgatcaatgac 23654487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 31937444 - 31937304
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  ||||||||||||||||||| ||| |||||||||||  ||||||| ||||||||| || || |||||||||||||| || |||||    
T  31937444 atttcgtcgtctctaaacgactctgtttgttttgagttcctgtctttgtgcggtgtgtttatgatttcccgtcttagtgcggtgtttatttgattcaggt 31937345  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||||||| |||| |||||||||    
T  31937344 tgaaagattagctttgaacaagtgcagatccgatcaatgac 31937304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 263
Target Start/End: Complemental strand, 19402920 - 19402704
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| ||||| |||||||||||| | |  |||||||| ||||| |||| |||| ||||| || ||||||||||||          |||||||||    
T  19402920 aaaatcacccctttgagttgtttttccttgtatcataattgaacaagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcg 19402824  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||||||||||||||||||  |||||||| |  |||||||  |||||||| || || |||||||||||||| || ||||||||||||||    
T  19402823 tctctgaacgactctgtttgttttgatttcccgtctttgtacggtgtgttt--gatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatt 19402726  T
Q  242 agctctgagcaagtgcaaatcc 263  Q
    |||| |||||||||||| ||||    
T  19402725 agctttgagcaagtgcagatcc 19402704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 258
Target Start/End: Original strand, 4393875 - 4393992
Alignment:
Q  141 gtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagat 240  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||||| |||||||||| || |||||||||||||| |  |||||||||||||    
T  4393875 gtctctgcacgattctgtttgttttgatttctcgtctttgtgcagtgtgttttttatttcccatcttagtgcggtgtttatttgactcaggttgaaagat 4393974  T
Q  241 tagctctgagcaagtgca 258  Q
    || || ||| ||||||||    
T  4393975 taactttgatcaagtgca 4393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 31705262 - 31705402
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||||    ||||||| |  ||||||||||||||| | || || |||||||||||||| || |||||    
T  31705262 atttcgtcgtctctgaacgactctgtttgttttgattttccatctttgtacggtgtgtttttgatttctcgtcttagtgcggtgtttatttgattcaggt 31705361  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||||||| |||| |||||||||    
T  31705362 tgaaagattagctttgaacaagtgcagatccgatcaatgac 31705402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 151 - 273
Target Start/End: Complemental strand, 35219919 - 35219797
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    ||||||||||||||||||||| |||||||||| | ||  ||||| ||||||| || || |||||||||||||| || |||||||||| ||||||| ||||    
T  35219919 gactctgtttgttttgatttcctgtctttgtgtagtgcattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaaaattagctttgag 35219820  T
Q  251 caagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||    
T  35219819 caagtgcaaatccgatcaatgac 35219797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 23638142 - 23638004
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |  ||||||||||||||||||||  ||||||||||| |||||||  |||||||| || || |||||||||||||| || |||||    
T  23638142 atttcgtcgtctctgaagaactctgtttgttttgatttcccgtctttgtgcagtgtgttt--gatttcccgtcttagtgcggtgtttatttgattcaggt 23638045  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||| |||  ||||||| ||||||    
T  23638044 tgaaagattagctttgagcaaatgctgatccaataaatgac 23638004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 31 - 272
Target Start/End: Complemental strand, 12481494 - 12481255
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || ||||||||||||||    |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  12481494 aattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 12481396  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||  |||||| ||||||||||||||||  || |||||||  ||||||||||||||||| || || |||||||||||||| ||  |    
T  12481395 g--atttcgtcgtctctaaacgactttgtttgttttgatttcccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattta 12481298  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||||| || ||| |||| ||| |||| ||||||||    
T  12481297 ggttgaaagattaactttgaacaagagcagatccgatcaatga 12481255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 15590074 - 15589992
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||| |||||||||    
T  15590074 ttttgatttcccgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcaaatccgatcaatgac 15589992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 29284849 - 29284962
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtg-tttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||||| ||||| ||||| ||||| | || || |||||||||||||| || || |    
T  29284849 atttcgtcgtctttgcacgactttgtttgttttgattttttgtctttgtgcgatgtgtttttttatttctcgtcttagtgcggtgtttatttgattcaag 29284948  T
Q  232 ttgaaagattagct 245  Q
    ||||||||||||||    
T  29284949 ttgaaagattagct 29284962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 1106875 - 1106751
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    ||||||||| ||||||||||||| |||||||||||  ||| ||||||| ||||| || || | || ||||||||| || |||||||||||||||||| ||    
T  1106875 acgactctgattgttttgatttcctgtctttgtgcggtgtatttttgacttcccgtcttagtacgatgtttatttgattcaggttgaaagattagctttg 1106776  T
Q  249 agcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| |||  |||||||||    
T  1106775 agcaagtgcagatctgatcaatgac 1106751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 6296273 - 6296133
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||| || |||||||||||||  ||||||||||  ||||||||| |||| || || || ||| |||||||||| || |||||    
T  6296273 atttcgtcgtctctgaacgactttgcttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggt 6296174  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    | |||||||| || ||||||| |||| |||| |||||||||    
T  6296173 taaaagattaactttgagcaaatgcagatccgatcaatgac 6296133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 6303083 - 6302943
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||| || |||||||||||||  ||||||||||  ||||||||| |||| || || || ||| |||||||||| || |||||    
T  6303083 atttcgtcgtctctgaacgactttgcttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggt 6302984  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    | |||||||| || ||||||| |||| |||| |||||||||    
T  6302983 taaaagattaactttgagcaaatgcagatccgatcaatgac 6302943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 6419970 - 6419742
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| | ||| |||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||| ||||          |||||||||    
T  6419970 aaaatcacccctctgagttgtttttccttctatcctaattgaataagtgatttc-acatattttttgttttctttcatttgtttttgtg--atttcgtcg 6419874  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||   |||||||||||||||  ||||||||||  ||||||||| ||||||| || || |||  |||||||||  | ||||||||||||||    
T  6419873 tctctgaacgacaacgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcaatgtttatttggttcaggttgaaagatt 6419774  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||| ||||||| | |||||| |||||    
T  6419773 agctttgagtaagtgcagacccaatcgatgac 6419742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 5527629 - 5527495
Alignment:
Q  154 tctgtttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagca 252  Q
    ||||||||||||||||||| ||||||||||  ||||||| |||||||  |||| || |||| || ||||||||| |||||||||| ||||||| ||| ||    
T  5527629 tctgtttgttttgatttctcgtctttgtgcggtgtgtttattgatttttcatcttagtgcgatgattatttaattcaggttgaaatattagctttgaaca 5527530  T
Q  253 agtgcaaatccaatcaatgactttgaaaccgtcaa 287  Q
    |||| | ||||||||||||| |||||  |||||||    
T  5527529 agtgtagatccaatcaatgattttgacgccgtcaa 5527495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 269
Target Start/End: Complemental strand, 8693784 - 8693542
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttct---aattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnn 126  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| | ||   ||||||||||||| |||| |||| ||||| || ||||||||||||        
T  8693784 aattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttt 8693686  T
Q  127 nnnnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgt---ttttgatttcccatcataatgcggtgtttattt 223  Q
          |||| |||||||||| ||||||  |||||||||||||||  ||||||||||  | | |   |||| |||| || || || ||| ||||||||||    
T  8693685 tgtc--attttgtcgtctctgaacgacttcgtttgttttgatttcccgtctttgtgctgtttttatttttttattttccgtcttagtgcagtgtttattt 8693588  T
Q  224 aatccaggttgaaagattagctctgagcaagtgcaaatccaatcaa 269  Q
     || |||||||||||||||||| |||||||||||| |||| |||||    
T  8693587 gattcaggttgaaagattagctttgagcaagtgcagatccgatcaa 8693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 15590203 - 15590065
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| | |||||||||||| ||||| | ||||||||||||||| ||| ||||| ||||| || ||||||||||||           
T  15590203 aattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgattt-cacatattttctgttttctttcgtttg--ctttt 15590107  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttc 171  Q
       ||||||||||||||| |||||||||||||||||||||||    
T  15590106 gtgatttcgtcgtctctgaacgactctgtttgttttgatttc 15590065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 13871625 - 13871500
Alignment:
Q  152 actctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagc 251  Q
    ||||| |||||||||||||   ||||||||||  ||||||||| |||| || || || ||| |||||||||| || ||||||| |||||| ||| |||||    
T  13871625 actctatttgttttgattttccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggttggaagatttgctttgagc 13871526  T
Q  252 aagtgcaaatccaatcaatgactttg 277  Q
    |||||||||||  |||||||||||||    
T  13871525 aagtgcaaatctgatcaatgactttg 13871500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 278
Target Start/End: Original strand, 2488169 - 2488379
Alignment:
Q  64 tttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgtt 163  Q
    ||||||||| | ||||| ||||||||| ||||||| | |||||| | ||||||||||||          ||||||| |||||||||||||| ||||||||    
T  2488169 tttccttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttgttttgta---atttcgttgtctctgcacgactatgtttgtt 2488265  T
Q  164 ttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    |||||||   |||||||||   ||||||||| ||||    || || |||||||||||| | || ||||||||||||||| || |||||||||| | ||||    
T  2488266 ttgattttccgtctttgtgtggtgtgttttt-attttatgtcttagtgcggtgtttatcttattcaggttgaaagattaactttgagcaagtgtagatcc 2488364  T
Q  264 aatcaatgactttga 278  Q
     |||||||| |||||    
T  2488365 gatcaatgattttga 2488379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 2304807 - 2304722
Alignment:
Q  188 tgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||| ||||||| || || ||| |||||||||| || |||||||||||||||||| |||||||||||| |||| |||||||||    
T  2304807 tgttttttatttcccgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 2304722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 14783195 - 14783123
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc 205  Q
    ||||||||||||||| || ||||||||||||||||||||  ||||||||||  ||||||||| ||||||||||    
T  14783195 atttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttcatttcccatc 14783123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 8978763 - 8978625
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||  |||||||| ||||| ||||  ||| | |||||||||| |||||||||| |||| ||||| |||| |||  ||||||| ||| | ||    
T  8978763 atttcgtcgtcta-gcacgactttgtttattttagtttttcgtctttgtgcgatgtgttttttattttccatcttaatacggcatttatttgatcaaagt 8978665  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||| | ||| |||||||| || ||||||||||    
T  8978664 tgaaagattagttttgatcaagtgcatattcaatcaatga 8978625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 23101374 - 23101292
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || |  |||||| ||||||| || ||||||||||||||| || ||||||||||||||||| |||||||||    
T  23101374 ttttgatttcccgtctttgtgcggtatttatttgattcaggttgaaagattaactttgagcaagtgcaaatccgatcaatgac 23101292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 1915154 - 1915065
Alignment:
Q  189 gtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||||| |||||| || || | |||||||||||| || |||||||||||||||||| ||| ||||||||||| || | ||||| |||||    
T  1915154 gtttttgctttcccgtcttagtacggtgtttatttgattcaggttgaaagattagctatgaacaagtgcaaattcagttaatgattttga 1915065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 23101403 - 23101353
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    ||||| ||||||||| |||||||||||||||||||||||  ||||||||||    
T  23101403 atttcatcgtctctgaacgactctgtttgttttgatttcccgtctttgtgc 23101353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 21507932 - 21507767
Alignment:
Q  31 aattttgacccaaa-atcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    |||||||||||||| ||||||| |   |||||||||||||||| | ||| ||||||||||| |||| |||| ||||  || ||||||||||||           
T  21507932 aattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttc-acatattttttgttttctttcgtttgtttttgt 21507834  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatt 198  Q
       |||| |||||||||  |||||| ||||||||||||||||  ||||| ||||  |||||||||||||    
T  21507833 g--attttgtcgtctctaaacgactttgtttgttttgatttcccgtcttagtgcggtgtgtttttgatt 21507767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 3610370 - 3610230
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||| ||||| | |||||||||||  || |||||||||||| | |||||| ||||||  | |||| |||| ||| || |||||||||||| | || ||||    
T  3610370 attttgtcgtgtttgcacgactctacttattttgatttcttttatttgtgtaatgtgcgtgttgagttcctatcttagtgcggtgtttatctgattcagg 3610271  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||  |||||| ||  |||||||| || ||||||||||    
T  3610270 ttgaaaagttagctttggacaagtgcagattcaatcaatga 3610230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 16329011 - 16328947
Alignment:
Q  214 gtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||||||||| ||  ||||||||||||||| | |||| ||||||||||  |||||||||||||||    
T  16329011 gtgtttatttgatttaggttgaaagattagttttgagtaagtgcaaatttaatcaatgactttga 16328947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 28943421 - 28943512
Alignment:
Q  186 tgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||||||||||||| | || ||||| |||| ||||||  | || ||| |||||| |||| ||| ||||||||||| ||||||||||||||||    
T  28943421 tgtgtttttgatttctcgtcttaatgtggtgcttatttgtttcaagttaaaagat-agctttgaacaagtgcaaattcaatcaatgactttga 28943512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 14783124 - 14783041
Alignment:
Q  175 tctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||  ||||||||||||||||| || || || ||||| ||||| ||  || |||||||||||| | ||||||||||||    
T  14783124 tctttgtgcggtgtgtttttgatttcccgtcttagtgtggtgtatatttgatttagattgaaagattagttttgagcaagtgca 14783041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 16338246 - 16338184
Alignment:
Q  214 gtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    |||||||||| ||  ||||||||||||||| | |||| | |||||||| ||||||||||||||    
T  16338246 gtgtttatttgatttaggttgaaagattagttttgagtaggtgcaaattcaatcaatgacttt 16338184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 21507803 - 21507721
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || || |||||||| | ||| || ||||||||||||||| || ||||||||||   |||| |||||||||    
T  21507803 ttttgatttcccgtcttagtgcggtgtgtttttgattcaggttgaaagattaactttgagcaagtgtcgatccgatcaatgac 21507721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 15175930 - 15176015
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    ||||| ||||||||||  ||||||||||  ||||||||| ||||| | |  || |||||||||||||| || |||||| |||||||    
T  15175930 tgtttattttgatttcacgtctttgtgcggtgtgttttttatttctcgtgttagtgcggtgtttatttgattcaggttaaaagatt 15176015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 5527740 - 5527700
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttc 71  Q
    |||||||| |||| ||| |||||||||||||||||||||||    
T  5527740 aattttgatccaacatcccccatttgaattgtttttccttc 5527700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 16339776 - 16339728
Alignment:
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||||||||||||| | |||| |||||||||| |||||||||| |||||    
T  16339776 ggttgaaagattagttttgagtaagtgcaaattcaatcaatgattttga 16339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 9978793 - 9978553
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| ||  |||||||||||||| | |  ||||||||||| || |||| |||| ||||| || ||||||||||||           
T  9978793 aattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttc-acatattttctgttttctttcgtttgtttttgt 9978695  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  9978694 g--atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 9978597  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| ||||||||||||||    
T  9978596 ggttgaaagattagctttgagcaagtgcagatccaatcaatgac 9978553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 20561256 - 20561016
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| | | ||| ||||||||| |||| |||| ||||| || ||||||||||||           
T  20561256 aattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttc-acatattttctgttttctttcgtttgtttttgt 20561158  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||| |||||||||| || |||||||||||||| || ||    
T  20561157 g--atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccatcttagtgcggtgtttatttgattca 20561060  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||| | | |||| |||||||||    
T  20561059 ggttgaaagattagctttgagcaagagtagatccgatcaatgac 20561016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 36868017 - 36868245
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||| | |||| |||| |||||    ||||||||||||          |||||||||    
T  36868017 aaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttc-acatattttctactttctttcgtttgtttttgcg--atttcgtcg 36868113  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||| | || || |||||||||||||| || ||||||||||||||    
T  36868114 tctctgaacgactctgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatt 36868213  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    | || |||||||||||||||||  ||||||||    
T  36868214 aactttgagcaagtgcaaatccgttcaatgac 36868245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 258
Target Start/End: Original strand, 12704684 - 12704909
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||||||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  12704684 aattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 12704782  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| |||||||||| |||||| ||||||||||||||||  ||||||||||| ||||||||| ||||||| || || |||||||||||||| ||  |    
T  12704783 g--attttgtcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccgtcttagtgcggtgtttatttgattta 12704880  T
Q  230 ggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||||| ||||||||||||    
T  12704881 ggttgaaagattagctttgagcaagtgca 12704909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 35333502 - 35333742
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  |||||||||||||| || | ||||||||||||||| |||| |||| ||||| || |||||||||||            
T  35333502 aattttgacccaaaaatcacccctaagaattgtttttcctgctatcctaattgaataagtgatttc-acatattttctgttttctttcgttt--attttt 35333598  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||| |||| |||||||||||||||||||||||  ||||||||||| ||||||||| |||| || || || |||||||||||||| || ||    
T  35333599 gtgatttcgtcgtttctgaacgactctgtttgttttgatttcccgtctttgtgcagtgtgttttttattttccgtcttagtgcggtgtttatttgattca 35333698  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||| | |||| |||||||||    
T  35333699 ggttgaaagattagctttgagcaagtgtagatccgatcaatgac 35333742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 34963100 - 34962960
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || |||||    
T  34963100 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggt 34963001  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||||| |||| |||||||||    
T  34963000 tgaaagattagatttgagcaagtgcagatcctatcaatgac 34962960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 43474252 - 43474012
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| | ||||||||||||||| |||| |||  ||||| || ||||||||||||           
T  43474252 aattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttc-acaaattttctgttttctttcgtttgtttttgt 43474154  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| | |||||| |||||||||||||   |||||||| |  ||||||||||||||||| || || |||||||||||||| || ||    
T  43474153 g--atttcgtcgtctctgaatgactctatttgttttgatttaccgtctttgtacggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 43474056  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||  |||||||||    
T  43474055 ggttgaaagattagctttgagcaagtgcagatctgatcaatgac 43474012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 258
Target Start/End: Complemental strand, 38535429 - 38535204
Alignment:
Q  31 aattttgacccaaaat-cacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    |||||||||||||||  ||||| |||||||| ||||||||||| |  |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  38535429 aattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 38535331  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||| |||| |||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| || ||    
T  38535330 g--atttcgtcgtctctgaacgactctgtttatttttatttcccgtctttgtgcggtgtgttttttatttcccgtcctagtgcggtgtttatttgattca 38535233  T
Q  230 ggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||||| ||||||||||||    
T  38535232 ggttgaaagattagctttgagcaagtgca 38535204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 5754385 - 5754529
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||||||||||||||| ||||  ||||||||||  ||||||||||||||| | || || |||||||||||||| || |||||    
T  5754385 atttcgtcgtctatgaacgactctgtttgttttgttttcccgtctttgtgcggtgtgtttttgatttctcgtcttagtgcggtgtttatttgattcaggt 5754484  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  5754485 tgaaagattagctttgagcaagtgcagatccgatcaatgactttg 5754529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 7582111 - 7581966
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| ||| | || |||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||  ||||||||| || |||||    
T  7582111 atttcgtcatctttacatgactctgtttgttttgatttctcgtctttgtgcactgtgtttttgatttctcatcttaatgccatgtttatttgattcaggt 7582012  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||| |||| || ||||||||||||||| ||||||| ||||||||    
T  7582011 tgaaatattatctttgagcaagtgcaaattcaatcaacgactttga 7581966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 29542889 - 29543030
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtg-tttatttaatccagg 231  Q
    ||||||||||||||| |||||||||||||||||||||||  || |||||||  ||||||||||||||||| || || ||||||| ||||||| || ||||    
T  29542889 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcggtgttttatttgattcagg 29542988  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  29542989 ttgaaaaattagctttgagcaagtgcaaatccgatcaatgac 29543030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 4604431 - 4604191
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| | || |||| || |||||||||||||| ||||||||||||||||| |||| |||| ||||| |  |||||||| |||           
T  4604431 aattttgacccaaaaattactcattcgagttgtttttccttctattctaattgaataagtgatttc-acatattttctgctttctttcgattgtttttgt 4604333  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| | |||||||||||||||||||| |  ||||| |||| ||||||||| ||||||| || || || ||||||||||| || ||    
T  4604332 g--atttcgtcgtctctgaatgactctgtttgttttgatttttcatctttatgcagtgtgttttttatttcccgtcttagtgtggtgtttatttgattca 4604235  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| ||||| |||||||||||| |||| |||||||||    
T  4604234 ggttgaaagactagctttgagcaagtgcagatccgatcaatgac 4604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 22597232 - 22597371
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| ||||||||||||||||||||||  |||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  22597232 attttgtcgtctctgaacgactctgtttgttttgattttctgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 22597331  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||||| ||||||||||||  ||| ||||||||    
T  22597332 tgaaagattagctttgagcaagtgcaggtccgatcaatga 22597371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 12891143 - 12891002
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgt-gtttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    ||||||||||||| | |||||||||||||||||||||||  ||||||||||  ||| |||||||||||| | || || |||||||||||||| || ||||    
T  12891143 atttcgtcgtctcggaacgactctgtttgttttgatttcccgtctttgtgcggtgttgtttttgatttctcgtcctagtgcggtgtttatttgattcagg 12891044  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| |||||||||||| |||| |||||||||    
T  12891043 ttgaaagattagctttgagcaagtgcagatccgatcaatgac 12891002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 32314465 - 32314679
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacga-ct 154  Q
    ||||||||||| ||||| | |||||||||||| || |||| |||| ||||| || ||||||||||||          |||| |||||||||| |||| ||    
T  32314465 gaattgttttttcttctatcctaattgaataaatgatttc-acatattttctgttttctttcgtttgtttttgtg--attttgtcgtctctg-acgaact 32314560  T
Q  155 ctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaag 254  Q
    |||||||||||||||||| ||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||||||||||||||| ||||||||    
T  32314561 ctgtttgttttgatttctcgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaag 32314660  T
Q  255 tgcaaatccaatcaatgac 273  Q
    |||| |||  |||||||||    
T  32314661 tgcagatctgatcaatgac 32314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 245
Target Start/End: Original strand, 25067849 - 25068060
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || |||||||||||||| || |||||||||||||| |||| |||| ||||| || |||||||||||            
T  25067849 aattttgacccaaaaatcacccctccgatttgtttttccttctattttaattgaataagtgatttc-acatattttctgttttctttcgttt--cttttt 25067945  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| || || ||| |||||||||| || ||    
T  25067946 gtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgc-gtgtttatttgattca 25068044  T
Q  230 ggttgaaagattagct 245  Q
    ||||||||||||||||    
T  25068045 ggttgaaagattagct 25068060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 27095714 - 27095943
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  || |||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  27095714 aaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttc-acatattttttgttttctttcgtttgtttttgtg--atttcgtcg 27095810  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtg-tttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagat 240  Q
    ||||||||||||||||||||||||||||||   ||||||||| ||||| ||||| ||||||| || || |||| ||||||||| || || ||||||||||    
T  27095811 tctctgcacgactctgtttgttttgatttcccctctttgtgcgatgtgtttttttatttcccgtcgtagtgcgatgtttatttgattcaagttgaaagat 27095910  T
Q  241 tagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||||| |  |||| |||||||||    
T  27095911 tagctttgagcaagtactgatccgatcaatgac 27095943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 4426682 - 4426542
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  ||| ||||| ||||||||||||   ||||||||||  ||||||||||||||||| || || |||||||||||||| || |||||    
T  4426682 atttcgtcgtctctaaacgtctctgcttgttttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggt 4426583  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| || ||||||    
T  4426582 tgaaagattagctttgagcaagtgcagatccgataaatgac 4426542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 4732167 - 4732307
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||| ||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || || ||    
T  4732167 atttcatcgtctctgaacgaatctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaagt 4732266  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || |||||||||| | |||| |||||||||    
T  4732267 tgaaagattatctttgagcaagtgtagatccgatcaatgac 4732307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 4739426 - 4739566
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||  ||||||||| | || |  || || |||||||||||||| || |||||    
T  4739426 atttcgtcgtctctgaatgactctgtttgttttgatttctcgtctttgtgcggtgtgttttttactttcggtcttagtgcggtgtttatttgattcaggt 4739525  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||||| |||| |||||||||    
T  4739526 tgaaagattagttttgagcaagtgcagatccgatcaatgac 4739566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7072972 - 7072832
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||  || || |||||||||||||| || |||||    
T  7072972 atttcatcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcggtgtttatttgattcaggt 7072873  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     |||| ||||| | |||| ||||||||||||||||||||||    
T  7072872 cgaaatattagttttgaggaagtgcaaatccaatcaatgac 7072832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 10287030 - 10286891
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| ||||||||| ||||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  10287030 atttcgtcgtctttgaacgactttgtttgttt-gatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 10286932  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  10286931 tgaaagattagctttgagcaagtgcagatccgatcaatgac 10286891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 277
Target Start/End: Original strand, 15919871 - 15920115
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || |||||||||||||| | |||||||||||| || |||| |||| |||||| | ||||||||||||           
T  15919871 aattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttc-acatattttcaat-ttctttcgtttgtttttgt 15919968  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatg--tgtttttgatttcccatcataatgcggtgtttatttaatc 227  Q
       |||||||| ||||||||||||||||||||||||||||||  ||||||||||  ||  | ||||| ||||||| || |||||| |||||||||| ||     
T  15919969 g--atttcgtcatctctgcacgactctgtttgttttgatttcccgtctttgtgcggtgtattttttttatttcccgtcttaatgc-gtgtttatttgatt 15920065  T
Q  228 caggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||||| ||||||| || ||||||||| |||| |||||||||||||    
T  15920066 caggttgaaatattagctttgtgcaagtgcagatccgatcaatgactttg 15920115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 273
Target Start/End: Complemental strand, 28231216 - 28230981
Alignment:
Q  35 ttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnat 134  Q
    ||||||| |||||||||||  ||||||||||||||||| |  |  ||||||||||| |||| |||| ||||| || ||||||||||||          ||    
T  28231216 ttgaccctaaatcacccatccgaattgtttttccttctatcttggttgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--at 28231120  T
Q  135 ttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttg 234  Q
    | | ||||||||| || |||||||||||||| |||||  ||||||||||  ||||||||| || |||| || || |||||||||||||| || |||||||    
T  28231119 tccatcgtctctgaacaactctgtttgtttttatttcccgtctttgtgcggtgtgttttttatatcccgtcttagtgcggtgtttatttgattcaggttg 28231020  T
Q  235 aaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||| |||| |||||||||||| |||| |||||||||    
T  28231019 aaagatcagctttgagcaagtgcagatccgatcaatgac 28230981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 139 - 277
Target Start/End: Original strand, 34471069 - 34471207
Alignment:
Q  139 tcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaag 238  Q
    |||||| || |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| |  || |||||| ||||||| || || ||||||||    
T  34471069 tcgtctttgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttaatttcccgttttagtgcggtatttatttgattcatgttgaaag 34471168  T
Q  239 attagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||| || |||||||||||| ||||||||||||||||||    
T  34471169 attaactttgagcaagtgcagatccaatcaatgactttg 34471207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 11937882 - 11937743
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||| || || |||| ||||||||| ||  ||||    
T  11937882 atttcttcgtctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgttgtttatttgat-taggt 11937784  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||   |||||||||||| |||| |||| ||||    
T  11937783 tgaaagattagtattgagcaagtgcagatccgatcagtgac 11937743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 28261912 - 28261772
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||||||||||| ||||||||||   |||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  28261912 atttcttcgtctctgaacgactctgtttcttttgatttcccttctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 28261813  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||| ||| |||| |||||||||    
T  28261812 tgaaagattagttttgagcaagagcagatccgatcaatgac 28261772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 31908840 - 31908701
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| ||||||||||||||||  ||||||||||  ||| ||||||||||||  || || |||||||||||||| || |||||    
T  31908840 atttcgtcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtgtatttttgatttcctgtcttagtgcggtgtttatttgattcaggt 31908741  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||| |||||| |||||||||||| |||| |||||||||    
T  31908740 tgaaag-ttagctttgagcaagtgcagatccgatcaatgac 31908701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 11798530 - 11798404
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgttttt-gatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctga 249  Q
    ||||||||||||||||||||||  |||||||||| ||||||||| |||||||| || || |||| ||||||||| || |||||||||||||||||| |||    
T  11798530 gactctgtttgttttgatttctcatctttgtgcagtgtgttttttgatttcccgtcttagtgcgatgtttatttgattcaggttgaaagattagctttga 11798431  T
Q  250 gcaagtgcaaatccaatcaatgacttt 276  Q
    ||| ||| | |||| ||||||||||||    
T  11798430 gcaggtgtagatccgatcaatgacttt 11798404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 44942382 - 44942523
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttc-ccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||||||| || || ||||||||||| ||||||||  ||||||||||  ||||||||| ||||  || || || |||||||||||||| || |||     
T  44942382 atttcgtcgtctttgaactactctgtttgtcttgatttcccgtctttgtgcggtgtgttttttatttttccgtcttagtgcggtgtttatttgattcagc 44942481  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  44942482 ttgaaagattagctttgagcaagtgcaaatccgatcaatgac 44942523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 17268248 - 17268010
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||| || || || |||||||||||||| | ||||||||||||||| ||| ||||| ||||| || || ||| |||||           
T  17268248 aattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgattt-cacatattttctgt-tttttttgtttg---tttt 17268154  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||| ||||||||||||||||  ||||||||||  ||||||||||||||||| |  |  || |||| |||||| || ||    
T  17268153 gtgatttcgtcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcgttgtgtttttgatttcccgtttttgtgtggtgattatttgattca 17268054  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||| ||||||| |||||||||||| |||| |||||||||    
T  17268053 ggttaaaaaattagctttgagcaagtgcagatccgatcaatgac 17268010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 275
Target Start/End: Complemental strand, 17767675 - 17767442
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    |||||||||||| |||||||| || || |||||||||||| | | |||||| |||||||| ||||||||| |||||||| ||||||| ||||            
T  17767675 aattttgacccagaatcaccccttcgagttgtttttccttatatcctaattaaataagtgatttccacatattttcagttttctttcatttgattttgtg 17767576  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
      ||||||||||        |||| ||||||||||||||||| ||||||||||  |||| ||||||||||||||| || | ||||| |||||| ||  ||    
T  17767575 --atttcgtcgt--------gact-tgtttgttttgatttctcgtctttgtgcggtgtgcttttgatttcccatcttagtacggtgcttatttgatttag 17767487  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgactt 275  Q
    ||| |||||||| || |||||||||||| |||| |||||||||||    
T  17767486 gttaaaagattaactttgagcaagtgcagatccgatcaatgactt 17767442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 273
Target Start/End: Complemental strand, 13740783 - 13740544
Alignment:
Q  32 attttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    |||||||||||||| |||||  |  ||||||||||||||||| | ||||||||||||||| |||| | || ||||| || ||||||||||||            
T  13740783 attttgacccaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttc-atatattttctgttttctttcgtttgtttttgtg 13740685  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
      |||||||| |||| | |||||| |||||||||||||||   ||||||||||  |||||||||| |||  | || || |||| ||||||||| || |||    
T  13740684 --atttcgtcatctccgaacgactttgtttgttttgattttccgtctttgtgcggtgtgtttttgctttttcgtcttagtgcgatgtttatttgattcag 13740587  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||||| ||| ||||| || ||||||||||||||    
T  13740586 gttgaaagattagctttgaacaagtacagatccaatcaatgac 13740544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 38384455 - 38384341
Alignment:
Q  159 ttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||  ||||||||||  ||||||||| |||| || || || |||||||||||||| || |||||||||||||||||| ||||||||||||    
T  38384455 ttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgca 38384356  T
Q  259 aatccaatcaatgac 273  Q
     |||| |||||||||    
T  38384355 gatccgatcaatgac 38384341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 41797691 - 41797828
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||  | |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || || ||||||||||| || |||||    
T  41797691 atttcgtcgtcttagaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgtggtgtttatttgattcaggt 41797790  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
       |||||||||| |||||||||||| ||||  ||||||||    
T  41797791 ---aagattagctttgagcaagtgcagatccgttcaatgac 41797828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 273
Target Start/End: Complemental strand, 13879026 - 13878893
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||  |||||||  |||||||| |  || |  ||||||||||| || ||||||||||    
T  13879026 gtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttt--gatttcccgttttagtagggtgtttatttgattcaggttgaaa 13878929  T
Q  238 gattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| || |||||||||||| |||| |||||||||    
T  13878928 gattaactttgagcaagtgcagatccgatcaatgac 13878893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 138 - 273
Target Start/End: Complemental strand, 14019151 - 14019018
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||  |||||||  |||||||| |  || |  ||||||||||| || ||||||||||    
T  14019151 gtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttt--gatttcccgttttagtagggtgtttatttgattcaggttgaaa 14019054  T
Q  238 gattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| || |||||||||||| |||| |||||||||    
T  14019053 gattaactttgagcaagtgcagatccgatcaatgac 14019018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 56 - 273
Target Start/End: Complemental strand, 34416859 - 34416647
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||| | | ||||||||||||||| |||| |||| |||||||| || ||| |||||          |||||||||||| || ||||||     
T  34416859 gaattgtttttccttatatcctaattgaataagtgatttc-acatattttcagtttttttttgtttgtttttgtg--atttcgtcgtct-tgaacgactt 34416764  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  ||||||||||  ||||||||| ||| | | || |||||  ||| |||||| || |||||||||||||||||| |||||||||    
T  34416763 tgtttgttttgatttcccgtctttgtgcggtgtgttttt-attcctcgtcttaatgttgtgcttatttgattcaggttgaaagattagctttgagcaagt 34416665  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  34416664 gcagatccgatcaatgac 34416647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 270
Target Start/End: Complemental strand, 823982 - 823845
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||| |||||||| || || |||||||||||||||||||||||  ||| ||||| |||| || || || |||||||||||||| || ||| |    
T  823982 attttgtcgtctttgcacgaccctattagttttgatttcttgtctttgtgcggtgtattttttattttccgtcttagtgcggtgtttatttgattcagat 823883  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaat 270  Q
    ||||| ||||||| ||||||||| || || ||||||||    
T  823882 tgaaaaattagctttgagcaagttcagattcaatcaat 823845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 9689985 - 9689869
Alignment:
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    |||| ||||||||||  ||| ||||||| ||||||||| ||||||| ||  | |||||||||||||| || ||||||||||||||| || ||||||||||    
T  9689985 gtttattttgatttcccgtcattgtgcagtgtgttttttatttcccgtctcagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtg 9689886  T
Q  257 caaatccaatcaatgac 273  Q
    || |||| |||||||||    
T  9689885 catatccgatcaatgac 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 18089420 - 18089281
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  || ||||| ||||||||||||||  |||||| |||  ||| ||||| ||||||  || || |||||||||||||| || || ||    
T  18089420 atttcgtcgtctcttaacaactctttttgttttgatttcccgtctttatgcggtgtattttttatttccg-tcttagtgcggtgtttatttgattcaagt 18089322  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  18089321 tgaaagattagctttgagcaagtgcagatccgatcaatgac 18089281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 171
Target Start/End: Original strand, 33012074 - 33012212
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||| |||  ||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||| || |||||||||           
T  33012074 aattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgattt-cacatattttcagttttgtttcgtttg--ttttt 33012170  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttc 171  Q
       ||||||||||||||| || ||||||||||||||||||||    
T  33012171 gtgatttcgtcgtctctgaacaactctgtttgttttgatttc 33012212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 191 - 269
Target Start/End: Original strand, 33012203 - 33012281
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaa 269  Q
    |||||||||||| || || ||||||||||||||||| |||||||||||||||||| ||| ||||||||||||| |||||    
T  33012203 ttttgatttcccgtcttagtgcggtgtttatttaattcaggttgaaagattagctttgatcaagtgcaaatccgatcaa 33012281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 277
Target Start/End: Complemental strand, 20124737 - 20124649
Alignment:
Q  189 gtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||| |||| ||||| || || ||||||||||| || |||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  20124737 gttttttattttccatcttagtgtggtgtttatttcattcaggttgaaagattagctttgagcaagtgcaaattcgatcaatgactttg 20124649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 174 - 276
Target Start/End: Complemental strand, 6431385 - 6431283
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  |||||||||||||||| ||| || ||||||||| |||| || ||||||||||||||| || |||||||| ||| |||  |||||||||    
T  6431385 gtctttgtgcggtgtgtttttgatttccgatcttagtgcggtgttgatttgattcaggttgaaagattaactttgagcaagcgcagatctgatcaatgac 6431286  T
Q  274 ttt 276  Q
    |||    
T  6431285 ttt 6431283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 45694576 - 45694327
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    ||||||||| ||||||||| |||  |||||||||| | || ||||||||||||||||||| |||||| || || | ||||||||||  |||             
T  45694576 aattttgactcaaaatcactcatccgaattgtttt-cattattttctaattgaataagtgatttccatatattgttagtcttcttttattt-attttttg 45694479  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtg------tttttgatttcccatcataatgcggtgtttattta 224  Q
      ||||| |||| | |||||||||||||||||||||||||   |||||||||| |||||      ||||| ||||| |||| || | ||||||||||||     
T  45694478 tgatttcatcgtatttgcacgactctgtttgttttgattttccgtctttgtgcgatgtgttttttttttttatttctcatcttagtacggtgtttatttg 45694379  T
Q  225 atccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    |  || |||||||||||| || ||||||| |||| ||| |||||||||||||    
T  45694378 actcatgttgaaagattatctttgagcaaatgcagatctaatcaatgacttt 45694327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 13548895 - 13548782
Alignment:
Q  162 ttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaat 261  Q
    ||||||||||| ||||||||||  ||||||||| ||| |   || ||||||||| ||||||| || |||||||||||||||||| ||| ||| |||| ||    
T  13548895 ttttgatttctcgtctttgtgcggtgtgttttttatt-catgtcttaatgcggtttttatttgattcaggttgaaagattagctttgatcaaatgcagat 13548797  T
Q  262 ccaatcaatgacttt 276  Q
     ||||||||||||||    
T  13548796 tcaatcaatgacttt 13548782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 43695965 - 43696105
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||  |||||| ||||  ||||||||||||||||    | |||||||  ||||||||| ||||||  || || |||||||||||||| || |||||    
T  43695965 atttcgttttctctgaacgatcctgtttgttttgattttccatttttgtgcggtgtgtttttaatttcctgtcttagtgcggtgtttatttgattcaggt 43696064  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| ||| |||||||| |||  |||||||||    
T  43696065 tgaaaaattagctttgaacaagtgcagatctgatcaatgac 43696105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 40039319 - 40039189
Alignment:
Q  147 gcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttg-atttcccatcataatgcggtgtttatttaatccaggttgaaagattagct 245  Q
    |||||| | ||||| |||||||||   |||||||| ||||||||||||  |||| || || || |||||||||||||| || |||||||||| |||||      
T  40039319 gcacgattttgtttattttgattttccgtctttgtacaatgtgtttttttattttccgtcttagtgcggtgtttattttattcaggttgaaaaattagta 40039220  T
Q  246 ctgagcaagtgcaaatccaatcaatgacttt 276  Q
     ||| |||||||| || ||||||||||||||    
T  40039219 ttgatcaagtgcagattcaatcaatgacttt 40039189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 5171893 - 5172037
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||  |||||||  ||||||||||||||||  ||||||||||  ||||||||||||||    |  || || ||||||||||| || |||||    
T  5171893 atttcgtcctcttagcacgacattgtttgttttgatttcccgtctttgtgcggtgtgtttttgattttatgttttattgtggtgtttattttattcaggt 5171992  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    || |||||||||| ||| ||| |||| || || |||||||||||||    
T  5171993 tg-aagattagctttgatcaaatgcagattcattcaatgactttga 5172037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 27666330 - 27666450
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||| ||||||||||  || |||  ||| ||||||||| ||||||| || || |||||||||||||| || |||||| ||||||||  | |||  ||||    
T  27666330 tgtttattttgatttcccgtttttaagcagtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttaaaagattaattttgatgaagt 27666429  T
Q  256 gcaaatccaatcaatgacttt 276  Q
    ||| || ||||||||||||||    
T  27666430 gcatattcaatcaatgacttt 27666450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 32015321 - 32015392
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc 205  Q
    ||||||||||||| | || ||||||||||||||||||||  |||||||||   ||||||||||||||||||||    
T  32015321 atttcgtcgtctc-gaacaactctgtttgttttgatttcccgtctttgtgtggtgtgtttttgatttcccatc 32015392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 122
Target Start/End: Complemental strand, 6431483 - 6431420
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||||| | |||||||| |||||||| ||||||||| |||||||| |||||| |||||    
T  6431483 ttgtttttccttatattctaattaaataagtgatttccacatattttcagttttcttttgtttg 6431420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 287
Target Start/End: Original strand, 43711432 - 43711583
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttat-ttaatccagg 231  Q
    |||||||||| |  |||||||| |||||||||||||||   ||||||||||||||| ||||| |||||| |||    || |||||||||   | | || |    
T  43711432 atttcgtcgttttagcacgactttgtttgttttgattttccgtctttgtgcaatgtattttttatttcctatc----tgtggtgtttatacgatttcatg 43711527  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttgaaaccgtcaa 287  Q
    || ||||||||| | ||| |||||||| || |||||||||||||||| | ||||||    
T  43711528 ttaaaagattagttttgatcaagtgcagattcaatcaatgactttgatatcgtcaa 43711583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 6510592 - 6510720
Alignment:
Q  146 tgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagct 245  Q
    ||||||| |||||||||||||||||   || |||||||   |||||||| |||| || || || |||  ||||||||| || || ||||||| |||||||    
T  6510592 tgcacgattctgtttgttttgattttccgtttttgtgcggcgtgttttttattttccgtcttagtgcaatgtttatttgattcaagttgaaaaattagct 6510691  T
Q  246 ctgagcaagtgcaaatccaatcaatgact 274  Q
     |||  ||||||| || ||||||||||||    
T  6510692 ttgaataagtgcatattcaatcaatgact 6510720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 12994336 - 12994292
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttctttt 75  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||||    
T  12994336 aattttgactcaaaatcactcatctgaattgtttttccttctttt 12994292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 276
Target Start/End: Original strand, 17792498 - 17792714
Alignment:
Q  58 attgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctg 157  Q
    |||||||||| |||| ||||| || |||||| | ||| ||||| |||||||| ||||||||||||          |||||||| |||  |||||||| ||    
T  17792498 attgtttttctttctcttctagttaaataagcgattttcacatattttcagttttctttcgtttgtttttgtg--atttcgtcatcta-gcacgactttg 17792594  T
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttga-tttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    ||| ||||||||||  |||||||| |  ||||||||| | ||||   || |||| | |||||||||| || || ||||||||||||| | ||| ||| ||    
T  17792595 tttattttgatttcccgtctttgttcggtgtgttttttaatttcatgtcttaatacagtgtttatttgattcatgttgaaagattagttttgatcaaatg 17792694  T
Q  257 caaatccaatcaatgacttt 276  Q
    || || ||||||||||||||    
T  17792695 cagattcaatcaatgacttt 17792714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 32015432 - 32015488
Alignment:
Q  215 tgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatg 271  Q
    ||||||||| || |||||||||||||||| | |||||||||||| |||| |||||||    
T  32015432 tgtttatttgattcaggttgaaagattagttttgagcaagtgcagatccgatcaatg 32015488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 38450352 - 38450424
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttattt 223  Q
    |||| ||||| ||||||||| | ||||||||||  ||||||||| ||||| ||||  ||||||||||||||||    
T  38450352 gactttgtttattttgatttatcgtctttgtgcggtgtgtttttaatttctcatctgaatgcggtgtttattt 38450424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Complemental strand, 19382465 - 19382394
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccat 204  Q
    ||||||| ||||||||| |||| |||||||||||||||   ||||||||||  ||||||||| |||| ||||    
T  19382465 atttcgttgtctctgcatgactttgtttgttttgattttccgtctttgtgcggtgtgttttttatttaccat 19382394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 272
Target Start/End: Complemental strand, 11581077 - 11581015
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    |||||| ||||||| || |||||||||||||||| | | | ||||||||||| ||||||||||    
T  11581077 tgcggtatttatttgattcaggttgaaagattaggtttcatcaagtgcaaattcaatcaatga 11581015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 291
Target Start/End: Original strand, 11426781 - 11426898
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  ||||||||| |||| || |  || |||| | ||||||| || || ||||||||||||||| ||||||| |||| ||| |||| || ||    
T  11426781 gtctttgtgcggtgtgttttttattttccgttctagtgcgatatttatttcattcaagttgaaagattagctttgagcaattgcagatctaatcgatcac 11426880  T
Q  274 tttgaaaccgtcaatgtt 291  Q
    |||||   ||||||||||    
T  11426881 tttgacgtcgtcaatgtt 11426898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 20607309 - 20607228
Alignment:
Q  162 ttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattag 243  Q
    ||||||||||   ||||||||| ||||||| || |||| || || || | |||||||||||| || ||||||||||||||||    
T  20607309 ttttgatttcccatctttgtgcgatgtgttcttaattttccttcttagttcggtgtttatttgattcaggttgaaagattag 20607228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 26254883 - 26254834
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaa 259  Q
    |||||||||||||| ||  |||||||||||||| || |||||||||||||    
T  26254883 tgcggtgtttatttgatttaggttgaaagattaactttgagcaagtgcaa 26254834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 17116529 - 17116435
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttct---aattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||| ||||||| || |  ||||||||||||||| |||| |   | || ||| |||| ||| ||||| |||||||||||||||||||||    
T  17116529 aattttgacctaaaatcatccgtccgaattgtttttccttttttttttttatttaaattagtgattttcacatattttcagtcttctttcgtttg 17116435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 3e-45; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 1281249 - 1281021
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    ||||||||||||  |||||||||||| || | ||||||||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  1281249 aaaatcacccatccgaattgtttttcattatattctaattgaataagtgatttc-acatattttttgttttctttcgtttgtttttgtg--atttcgtcg 1281153  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||||||||||||||||||| ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||||||||||||||    
T  1281152 tctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatt 1281053  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    | || |||||||||||| |||| | |||||||    
T  1281052 acctttgagcaagtgcagatccgaacaatgac 1281021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 10094464 - 10094678
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||          |||||||||||| || ||||||     
T  10094464 gaattgtttttccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcgtctttgaacgactt 10094560  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || |||||||||||||||||| |||||||||    
T  10094561 tgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagt 10094660  T
Q  256 gcaaatccaatcaatgac 273  Q
    |||||||| |||||||||    
T  10094661 gcaaatccgatcaatgac 10094678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 9785314 - 9785554
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||||||||||||||| |  |||||||||||||| |||| |||| ||||  || |||||| ||||            
T  9785314 aattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttc-acatattttttgttttcttttgttt--attttt 9785410  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||| ||||||||||||||  ||||||||||  ||||||||||||||| |||| || |||||||||||||| || ||    
T  9785411 gtgatttcgtcgtctctgaacgactctatttgttttgatttcccgtctttgtgcggtgtgtttttgatttctcatcttagtgcggtgtttatttgattca 9785510  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  9785511 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 9785554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 45482161 - 45482301
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||| ||||||| || || |||| ||||||||| || |||||    
T  45482161 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcgatgtgttttttatttcccgtcttagtgcgatgtttatttgattcaggt 45482260  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  45482261 tgaaagattagctttgagcaagtgcagatccgatcaatgac 45482301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 46026153 - 46025913
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||| |||  ||||||||||||||||| | ||||||||||||||  |||  |||| ||||  || ||||||||||||           
T  46026153 aattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttattta-acatattttttgttttctttcgtttgtttttgt 46026055  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| ||  |    
T  46026054 t--atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattta 46025957  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  46025956 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 46025913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 17509228 - 17509088
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| | |||||||||||||||||||||  ||||||||||| |||||||||||||| || || || ||||||||||||||||| |||||    
T  17509228 attttgtcgtctctgaatgactctgtttgttttgatttcccgtctttgtgcagtgtgtttttgattttccgtcttagtgcggtgtttatttaattcaggt 17509129  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||||| |||| |||||||||    
T  17509128 tgaaagattagttttgagcaagtgcagatccgatcaatgac 17509088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 17543986 - 17544126
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| | |||||||||||||||||||||  ||||||||||| |||||||||||||| || || || ||||||||||||||||| |||||    
T  17543986 attttgtcgtctctgaatgactctgtttgttttgatttcccgtctttgtgcagtgtgtttttgattttccgtcttagtgcggtgtttatttaattcaggt 17544085  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||||| |||| |||||||||    
T  17544086 tgaaagattagttttgagcaagtgcagatccgatcaatgac 17544126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 36253027 - 36253167
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||| |||||  ||||||||||  |||||||||||||||||||| ||   |||||||||||| || |||||    
T  36253027 atttcgtcgtctctgaacgactctgtttgttttaatttcccgtctttgtgcggtgtgtttttgatttcccatcttaggacggtgtttatttgattcaggt 36253126  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| |||||||||||| |||| |||||||||    
T  36253127 tgaaaaattagctttgagcaagtgcagatccgatcaatgac 36253167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 42644685 - 42644909
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||| || || || ||||||||||||          ||||||       
T  42644685 aaaatcactcatttgaattgtttttccttctatcctaattgaataagtgatttc-acatattctctgttttctttcgtttgtttttgtg--atttcg--- 42644778  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
     ||||| |||||||||||||||||||||||  ||||||||||  ||||||||| |||| || || || ||||||||||||||||| |||||||||| |||    
T  42644779 -ctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttatttaattcaggttgaaatatt 42644877  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||||||||| || |||| |||||||||    
T  42644878 agctttgagcaagtacagatccgatcaatgac 42644909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 11833042 - 11833255
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||| ||||| || ||||||||||||          ||||||||||||||| || || |    
T  11833042 gaattgtttttccttctttcctaattgaataagtgatttc-acatattttctgtattctttcgtttgtttttgtg--atttcgtcgtctctgtacaaccc 11833138  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  || |||||||  ||||||| | ||||| | || || |||||||||||||| || |||||||||||||||||| |||||||||    
T  11833139 tgtttgttttgatttcccgtttttgtgcggtgtgtttat-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagt 11833237  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  11833238 gcagatccgatcaatgac 11833255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 56 - 273
Target Start/End: Complemental strand, 45457654 - 45457440
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||||| |  |||||||||||||| |||| |||| ||||  || ||||||||||||          ||||| ||||||||| ||||||     
T  45457654 gaattgtttttccttctatcttaattgaataagtgatttc-acatattttatgttttctttcgtttgttttcgtg--atttcatcgtctctgaacgactt 45457558  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||| | || || | |||||||||||| || |||||||||||||||||| |||||||||    
T  45457557 tgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagattagctttgagcaagt 45457458  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  45457457 gcagatccgatcaatgac 45457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 21990759 - 21990899
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||| |||| |||||||| ||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||| |    
T  21990759 atttcgtcgtttctgaacgactctttttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcagct 21990858  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||  |||| |||||||||    
T  21990859 tgaaagattagctttgagcaagtgctgatccgatcaatgac 21990899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 24320247 - 24320107
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| |||||||||||||||||||||||||||||||||  |||||| |||  ||||||||| |||| || || || |||||||||||||| || |||||    
T  24320247 atttcatcgtctctgcacgactctgtttgttttgatttcccgtctttctgcggtgtgttttttattttccgtcttagtgcggtgtttatttgattcaggt 24320148  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| ||| |||||    
T  24320147 tgaaagattagctttgagcaagtgcagatccgatctatgac 24320107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 42603881 - 42603653
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  |||||||||||| |||| |  |||||||||||||| |||| |||| ||||| || ||||||||||||          |||||||||    
T  42603881 aaaatcacccctccgaattgtttttcattctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcg 42603785  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    ||| |  |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||  || || |||||||||||||| || ||||||||||||||    
T  42603784 tctataaacgactctgtttgttttgatttcccgtctttgtgcgctgtgttttttatttcctgtcctagtgcggtgtttatttgattcaggttgaaagatt 42603685  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| | |||||||||| |||| |||||||||    
T  42603684 agctttaagcaagtgcatatccgatcaatgac 42603653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 56 - 269
Target Start/End: Complemental strand, 15674710 - 15674499
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    |||||||||||||| || | ||||||||||||||| |||| |||| ||||| || ||||||||||||          |||||||| |||||| ||||| |    
T  15674710 gaattgtttttcctcctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcatctctgaacgaccc 15674614  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgattt-cccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaag 254  Q
    ||||||||||||||||  ||||||||||  |||||||||||||| ||| || || || ||||||||||| || |||||||||||||||||| | ||||||    
T  15674613 tgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttccccgtcttagtgtggtgtttattttattcaggttgaaagattagcttttagcaag 15674514  T
Q  255 tgcaaatccaatcaa 269  Q
    ||||||| |||||||    
T  15674513 tgcaaattcaatcaa 15674499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 31 - 263
Target Start/End: Complemental strand, 48304519 - 48304287
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  |||||| ||||||| || | ||||||||||||||| |||| | |  ||||| || |||||| |||||           
T  48304519 aattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttc-atagattttctgttttctttagtttgttttttt 48304421  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || |||||||||||||||||||||||  |||||||| |  ||||||||| ||||| | || || |||||||||||||| || ||    
T  48304420 gtgatttcgtcgtctttgaacgactctgtttgttttgatttcccgtctttgtacggtgtgttttttatttctcgtcttagtgcggtgtttatttgattca 48304321  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    |||||||||||||||| |||||||||||| ||||    
T  48304320 ggttgaaagattagctttgagcaagtgcagatcc 48304287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 15017400 - 15017274
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||| || | |||||||||||| || |||||    
T  15017400 atttcgttgtctctgaacgactctgtttgttttgatttcttgtctttgtgcggtgtgttttttattttccatcttagtccggtgtttatttgattcaggt 15017301  T
Q  233 tgaaagattagctctgagcaagtgcaa 259  Q
    ||||| ||||||| |||| ||||||||    
T  15017300 tgaaatattagctttgagtaagtgcaa 15017274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 9719997 - 9719857
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| |||||||||||||||||||||||  ||||| |||   ||||| |||||||| || || || |||||||||||||| || |||||    
T  9719997 atttcgtcatctctgaacgactctgtttgttttgatttcccgtcttcgtgttgtgtgtgtttgattttccgtcttagtgcggtgtttatttgattcaggt 9719898  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  9719897 tgaaagattagctttgagcaagtgcagatccgatcaatgac 9719857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 21954942 - 21954698
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    |||||| |||||||||||| |||  || ||||||||| |||| | |||||| ||||| || ||||||||| || ||||| ||||||||| ||            
T  21954942 aattttaacccaaaatcactcatccgagttgtttttcattctatcctaattaaataaatgatttccacatattgtcagttttctttcgtctgtttttgtg 21954843  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
      |||||||||||||||||||| | ||||||||||||||||  || ||| ||   ||||||||| ||||  | || || ||  |||||||||| || |||    
T  21954842 --atttcgtcgtctctgcacgattgtgtttgttttgatttcaagtttttatgtggtgtgttttttatttttcgtcttagtgtcgtgtttatttgattcag 21954745  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21954744 gttgaaagattagctttgagcaagtgcaaatccgatcaatgactttg 21954698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 272
Target Start/End: Complemental strand, 39533099 - 39532860
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||| |  | |||||||||||||||||| |  |||||||||||||| |||| |||| ||||| || |||||| |||||           
T  39533099 aattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttc-acatattttctgttttcttttgtttgttttcgt 39533001  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || ||||||||||| |||||||||||   |||||||||  ||||||||| |||||||  | || |||||||||||||| || ||    
T  39533000 g--atttcgtcgtctttgaacgactctgttagttttgatttcccatctttgtgcggtgtgttttttatttcccgccttagtgcggtgtttatttgattca 39532903  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
     ||||||||||||||| |||||||||||| |||| ||||||||    
T  39532902 agttgaaagattagctttgagcaagtgcagatccgatcaatga 39532860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 32740762 - 32740989
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    ||||||||||  | ||||||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||            |||||||||    
T  32740762 aaaatcaccccctcgaattgtttttccttctatcctaattgaataagtgatttc-acatattttttgttttctttcgtt--gatttttgtgatttcgtcg 32740858  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||| | ||||||||||||||||||||||| ||||||||||   | ||||||| ||||||| || || || ||||| ||||| || ||||||||||||||    
T  32740859 tctcagaacgactctgtttgttttgatttcctgtctttgtgtg-tatgttttttatttcccgtcttagtgtggtgtctatttgattcaggttgaaagatt 32740957  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    || | ||||||||||||||||| |||||||||    
T  32740958 agttttgagcaagtgcaaatccgatcaatgac 32740989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 3266485 - 3266623
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| |||||||||||||||||||||||  ||||||||||  |||||||  |||||| | || || | |||||||||||| || |||||    
T  3266485 attttgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttt--gatttctcgtcttagtacggtgtttatttgattcaggt 3266582  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  3266583 tgaaagattagctttgagcaagtgcagatccgatcaatgac 3266623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 2622689 - 2622829
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || | | |||||||||||||||||||| || |||||||  ||||||||| |||||||||| |  |||||||||||||| || ||  |    
T  2622689 atttcgtcgtctttgaatggctctgtttgttttgatttctcgtttttgtgcggtgtgttttttatttcccatctttgtgcggtgtttatttgattcaaat 2622788  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || |||||||||||| ||||||||||||||    
T  2622789 tgaaagattaactttgagcaagtgcagatccaatcaatgac 2622829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 21603460 - 21603697
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    |||||||||| |||| ||||| | |||||||||||||||||| | ||||||||||||||| |||| |||| || || || ||||||| ||||            
T  21603460 aattttgaccaaaaagcacccctctgaattgtttttccttctatcctaattgaataagtgatttc-acatattctctgttttctttcctttgtttttgtg 21603558  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
      |||| |||||||||| ||   ||| ||||||||||||||  ||| ||||||  ||||||||||||||||| || || |||||||||||||| || |||    
T  21603559 --attttgtcgtctctgaaca--tctatttgttttgatttcccgtcattgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcag 21603654  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || |||| ||||||| |||| |||||||||    
T  21603655 gttgaaagattaactttgagaaagtgcagatccgatcaatgac 21603697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 142 - 277
Target Start/End: Complemental strand, 4621382 - 4621247
Alignment:
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||||||||||||||||||||||||||   |||||||||   ||||||||||||||| | |  || |||||||||||||| || ||||||||||||||    
T  4621382 tctctgcacgactctgtttgttttgattttccgtctttgtgtggtgtgtttttgatttcacgttttagtgcggtgtttatttgattcaggttgaaagatt 4621283  T
Q  242 agctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    || | ||| |||||||| |||| |||||||||||||    
T  4621282 agttttgaacaagtgcagatccgatcaatgactttg 4621247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 41288055 - 41288193
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| ||||| |||||||||||||||||  ||||||||||  |||||||  ||||| || || || | |||||||||||| || |||||    
T  41288055 attttgtcgtctctgaacgacactgtttgttttgatttcccgtctttgtgcggtgtgttt--gattttccgtcttagtacggtgtttatttgattcaggt 41288152  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  41288153 tgaaagattagctttgagcaagtgcagatccgatcaatgac 41288193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 10574478 - 10574618
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| ||||||||||||||||  ||||||||||  ||||||||| |||| || || || | |||||||||||| || || ||    
T  10574478 atttcgtcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttaattttccgtcttagttcggtgtttatttgattcatgt 10574577  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||||| |||| |||||||||    
T  10574578 tgaaagattagttttgagcaagtgcagatccgatcaatgac 10574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 43847167 - 43847307
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||| ||||||||||   |||||||||  ||||||||| |||| ||||| || ||  |||||||||| || |||||    
T  43847167 atttcgtcgtctctgaacgactctgtttattttgatttcccatctttgtgcggtgtgttttttattttccatcttagtgttgtgtttatttgattcaggt 43847266  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||||||||| | |||| |||||||||    
T  43847267 tgaaagattagatttgagcaagtgtagatccgatcaatgac 43847307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 36719576 - 36719436
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||||   |||||||||||  |||||||| |||| || || || || |||| |||||| || |||||    
T  36719576 atttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcagcgtgttttttattttccgtcttagtggggtgcttatttgattcaggt 36719477  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || ||||||||| || |||  |||||||||    
T  36719476 tgaaagattaactttgagcaagtacagatctgatcaatgac 36719436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 22747532 - 22747408
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||| ||||||||||||||||| |||||||||||| |  ||||||||||   |||||||||| ||||| || ||  |||||||||| || ||  ||||    
T  22747532 atttcgccgtctctgcacgactctttttgttttgattccc-gtctttgtgcggcgtgtttttgagttcccgtcttagggcggtgtttaattgattaaggt 22747434  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||||||||||||||||    
T  22747433 tgaaagattagctctgagcaagtgca 22747408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 6667492 - 6667632
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| || ||||||||||||||||||||  ||||||||||  ||||||||| |||| || || || ||||||||||| || |  || ||    
T  6667492 atttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttaattgactcaagt 6667591  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||| ||| ||| |||||||| |||  |||||||||    
T  6667592 tgaaagattggctttgatcaagtgcatatctgatcaatgac 6667632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 27050487 - 27050362
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||| |||| ||||||||||||||| |||||| |||||||||||  || ||||| ||||| | || || |||||||||||||| || || ||    
T  27050487 attttgtcgtctttgcatgactctgtttgttttaatttctagtctttgtgcatcgtattttttatttctcgtcttagtgcggtgtttatttgattcatgt 27050388  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
     |||||||||||| ||||||| ||||    
T  27050387 cgaaagattagctttgagcaaatgca 27050362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 5684388 - 5684599
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    |||||||||||| |||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||          ||||||| ||||||| |||| ||    
T  5684388 gaattgtttttcattctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgcttttgtg--atttcgttgtctctgaacgattc 5684484  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    |||||||||| |||||   ||||| |||   ||||||||||||| || || || |  ||||||| ||| || |||||||||||||||||| |||||||||    
T  5684485 tgtttgtttttatttcccatcttt-tgcggcgtgtttttgattttccgtcttagtatggtgtttgtttgattcaggttgaaagattagctttgagcaagt 5684583  T
Q  256 gcaaatccaatcaatg 271  Q
    ||| |||| |||||||    
T  5684584 gcagatccgatcaatg 5684599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 56 - 271
Target Start/End: Original strand, 5709438 - 5709649
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    |||||||||||| |||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||          ||||||| ||||||| |||| ||    
T  5709438 gaattgtttttcattctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgcttttgtg--atttcgttgtctctgaacgattc 5709534  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    |||||||||| |||||   ||||| |||   ||||||||||||| || || || |  ||||||| ||| || |||||||||||||||||| |||||||||    
T  5709535 tgtttgtttttatttcccatcttt-tgcggcgtgtttttgattttccgtcttagtatggtgtttgtttgattcaggttgaaagattagctttgagcaagt 5709633  T
Q  256 gcaaatccaatcaatg 271  Q
    ||| |||| |||||||    
T  5709634 gcagatccgatcaatg 5709649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 17473718 - 17473636
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || |  ||||||||||||||||| |||||||||||||||| | |||||||||||| |||| |||||||||    
T  17473718 ttttgatttcccgtctttgtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgac 17473636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 17579496 - 17579578
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||| || |  ||||||||||||||||| |||||||||||||||| | |||||||||||| |||| |||||||||    
T  17579496 ttttgatttcccgtctttgtgcggtgtttatttaattcaggttgaaagattagttttgagcaagtgcagatccgatcaatgac 17579578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 138 - 275
Target Start/End: Original strand, 25531554 - 25531692
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    ||||||| |||| ||| ||||||||||||||||   |||||||||||| |  |||||| |||   ||| || |||||||||||||| ||  ||||||||     
T  25531554 gtcgtctttgcatgacactgtttgttttgattttccgtctttgtgcaacgcatttttgtttttatatcttagtgcggtgtttatttgattaaggttgaat 25531653  T
Q  238 gattagctctgagcaagtgcaaatccaa-tcaatgactt 275  Q
    |||||||| |||||||||||||||| || ||||||||||    
T  25531654 gattagctttgagcaagtgcaaatcaaattcaatgactt 25531692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 154 - 276
Target Start/End: Original strand, 29352345 - 29352466
Alignment:
Q  154 tctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaa 253  Q
    ||||||||||| ||||||| ||||||||||  ||||||||| ||| ||| || || |||| ||||||||| || |||||||||||||||||| || ||||    
T  29352345 tctgtttgtttagatttctcgtctttgtgcggtgtgttttttatt-cccgtcttagtgcgatgtttatttgattcaggttgaaagattagctttgtgcaa 29352443  T
Q  254 gtgcaaatccaatcaatgacttt 276  Q
    ||| | || | ||||||||||||    
T  29352444 gtgtagattcgatcaatgacttt 29352466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 277
Target Start/End: Original strand, 9136958 - 9137197
Alignment:
Q  34 tttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnna 133  Q
    ||||||| ||||| |||  || ||||||||||||||||||||  ||||| | ||||| ||| ||||| ||| | ||||||||||||||           |    
T  9136958 tttgaccaaaaattaccacttcgaattgtttttccttctttttcaattggaaaagtgattttcacatatttcccgtcttctttcgttt--ctttttgtga 9137055  T
Q  134 tttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggtt 233  Q
    || |||||||||||||||| |||||||||||| |||||  ||||||||||  ||||||||| |||||  | | || || ||||||||||| ||  |||||    
T  9137056 ttccgtcgtctctgcacgattctgtttgtttttatttc-cgtctttgtgcggtgtgttttttatttcata-cttagtgtggtgtttatttgattaaggtt 9137153  T
Q  234 gaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
     ||||||||||| |||| ||||||| || | |||| ||||||||    
T  9137154 aaaagattagctttgagaaagtgcatattcgatcattgactttg 9137197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 273
Target Start/End: Complemental strand, 24988449 - 24988364
Alignment:
Q  188 tgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||| |||||| || || |||||||||||||| || |||||||||||||||||| |||||||||| | |||| |||||||||    
T  24988449 tgtttttggtttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgtagatccgatcaatgac 24988364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 291
Target Start/End: Original strand, 25112610 - 25112767
Alignment:
Q  134 tttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggtt 233  Q
    |||| ||||||||  | ||||||||||||||| |||| |  |||||||||  ||||||||| ||||| | || || | || ||||||||| ||  | |||    
T  25112610 tttcatcgtctctagaagactctgtttgtttttatttttcttctttgtgcggtgtgttttttatttcacgtcttagtacgatgtttatttgatttaagtt 25112709  T
Q  234 gaaagattagctctgagcaagtgcaaatccaatcaatgactttgaaaccgtcaatgtt 291  Q
    ||||||||| || |||||||||||| |||| |||||| ||||||| | ||||||||||    
T  25112710 gaaagattaactttgagcaagtgcatatccgatcaataactttgatatcgtcaatgtt 25112767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 37376055 - 37375946
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||| | | |||||||||||||||||||||| ||||||||||  ||||||||| |||| || || || ||||  |||||||| || |||||    
T  37376055 attttgtcgtctcagaatgactctgtttgttttgatttctcgtctttgtgcggtgtgttttttattttccgtcttagtgcgtagtttatttgattcaggt 37375956  T
Q  233 tgaaagatta 242  Q
    ||||||||||    
T  37375955 tgaaagatta 37375946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 277
Target Start/End: Original strand, 38276982 - 38277085
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||| |||| ||||||||| ||||||| || || |||  ||||||||| || || ||||||| ||||||| ||||||||| ||||||| |||||||||    
T  38276982 gtctttctgcagtgtgttttttatttcccgtcttagtgcaatgtttatttgattcatgttgaaatattagctttgagcaagttcaaatccgatcaatgac 38277081  T
Q  274 tttg 277  Q
    ||||    
T  38277082 tttg 38277085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 138 - 291
Target Start/End: Original strand, 6495994 - 6496147
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    ||||||| || |||||| ||||||||||||||||| ||||| || | |||| ||||| || |    || || |||  ||||||||| || ||||||||||    
T  6495994 gtcgtctttgtacgactttgtttgttttgatttctcgtcttcgtacgatgtattttttatatattgtcttagtgcaatgtttatttgattcaggttgaaa 6496093  T
Q  238 gattagctctgagcaagtgcaaatccaatcaatgactttgaaaccgtcaatgtt 291  Q
    ||||| || ||| |||||||| |||| |||||| ||||||| | ||||||||||    
T  6496094 gattaactttgaacaagtgcagatccgatcaataactttgacatcgtcaatgtt 6496147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 28665036 - 28664899
Alignment:
Q  31 aattttgaccc-aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||| |||||||||| |  || |||||||||||||| | ||||||||||||||| ||| ||||| ||||| || ||||||||||||           
T  28665036 aattttgaccctaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgattt-cacatattttctgttttctttcgtttg--ttttt 28664940  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgattt 170  Q
       |||| |||||||||| ||||||||||||||||||||||    
T  28664939 gtgattttgtcgtctctgaacgactctgtttgttttgattt 28664899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 28664907 - 28664825
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||| || || || ||| |||||||||| || |||||||||||||||||| |||||||||||| |||  |||||||||    
T  28664907 ttttgattttccgtcttagtgcagtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatctgatcaatgac 28664825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 5238064 - 5238193
Alignment:
Q  147 gcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctc 246  Q
    |||||||| ||||| ||||||||||| || |||||    ||||||| ||||||||| || |  |||||| ||||||| || ||||||||||||||| ||     
T  5238064 gcacgactttgtttattttgatttctcgtatttgtatggtgtgtttgtgatttcccgtcttggtgcggtatttatttgattcaggttgaaagattaactt 5238163  T
Q  247 tgagcaagtgcaaatccaatcaatgacttt 276  Q
    | | ||| |||| || ||||||||||||||    
T  5238164 taaccaaatgcagattcaatcaatgacttt 5238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 9137530 - 9137625
Alignment:
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaa 253  Q
    ||||||||||||||| ||||||||||  ||||||||| ||||||| || ||  ||  ||||||||| || ||| |||||||||||| | |||||||    
T  9137530 tttgttttgatttctcgtctttgtgcgttgtgttttttatttcccgtcttagcgcaatgtttatttgattcagtttgaaagattagttttgagcaa 9137625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 14657845 - 14657806
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttct 172  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  14657845 atttcgtcgtctctgcacgactctgtttcttttgatttct 14657806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 26161125 - 26161188
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||| |||| || |||||||||||||||||| |||||||||||| |||| |||||||||    
T  26161125 tgcggggttcatttgattcaggttgaaagattagctttgagcaagtgcagatccgatcaatgac 26161188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 36579307 - 36579245
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaa 253  Q
    |||||||||||| || || |||||||||||||| || ||| |||||||||||||| |||||||    
T  36579307 ttttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagattagctttgagcaa 36579245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 36579436 - 36579298
Alignment:
Q  31 aattttgaccc-aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||| |||||||||| |  ||||||||||||||||| | ||| ||||||||||| || |||||| ||||  || |||||| |||||           
T  36579436 aattttgacccgaaaatcacccctccgaattgtttttccttctatcctagttgaataagtgatt-ccacatattttttgttttcttttgtttgtttttgt 36579338  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttc 171  Q
       ||||||||||||||| |||||||| ||||||||||||||    
T  36579337 g--atttcgtcgtctctgaacgactctatttgttttgatttc 36579298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 215 - 276
Target Start/End: Original strand, 10623977 - 10624038
Alignment:
Q  215 tgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||| || || ||||||||||||||| ||| ||||| ||||| ||||||||||||||    
T  10623977 tgtttatttgattcaagttgaaagattagctttgatcaagtacaaattcaatcaatgacttt 10624038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 27535465 - 27535518
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttc 95  Q
    ||||||||||||  ||||||||||||||||| ||||||||| ||||||| ||||    
T  27535465 aaaatcacccatccgaattgtttttccttctattctaattgtataagtgatttc 27535518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 33476676 - 33476615
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttttt 194  Q
    |||||||||||| ||||||||| | ||||||||||||||| || |||||||| ||| |||||    
T  33476676 atttcgtcgtctttgcacgactttttttgttttgatttctcgtatttgtgcagtgtattttt 33476615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 37593273 - 37593333
Alignment:
Q  190 tttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    ||||| ||||||| || ||||||||||||||||| || |||||||||| ||||||| ||||    
T  37593273 ttttttatttcccgtcttaatgcggtgtttatttgattcaggttgaaatattagctttgag 37593333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 40761701 - 40761825
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    ||||||||||||||||||||||     | || |||  ||||||||| ||||| | |  || |||||||||||||| ||  ||||||||| ||||||| ||    
T  40761701 acgactctgtttgttttgatttacctacattatgcggtgtgttttttatttctcgtattagtgcggtgtttatttgattaaggttgaaatattagctttg 40761800  T
Q  249 agcaagtgcaaatccaatcaatgac 273  Q
    | |||||||| |||| |||||||||    
T  40761801 aacaagtgcagatccgatcaatgac 40761825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 278
Target Start/End: Original strand, 39707400 - 39707526
Alignment:
Q  153 ctctgtttgttttgatttcttgtctttgtgcaatgtgtttttg-atttccca-tcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    ||||||||||||||||||   ||||||||||  |||||||||  ||||  || || || ||| ||||||||||| || || |||||  |||| || ||||    
T  39707400 ctctgtttgttttgattttccgtctttgtgcggtgtgtttttttatttttcagtcttagtgcagtgtttatttattcaag-ttgaagtattaactttgag 39707498  T
Q  251 caagtgcaaatccaatcaatgactttga 278  Q
    |||||||| |||||||||||||||||||    
T  39707499 caagtgcagatccaatcaatgactttga 39707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 17473747 - 17473697
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    |||| |||||||||| | |||||||||||||||||||||  ||||||||||    
T  17473747 attttgtcgtctctgaatgactctgtttgttttgatttcccgtctttgtgc 17473697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 17579467 - 17579517
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    |||| |||||||||| | |||||||||||||||||||||  ||||||||||    
T  17579467 attttgtcgtctctgaatgactctgtttgttttgatttcccgtctttgtgc 17579517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 26161077 - 26161127
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    ||||| ||||||||| ||||||||||||||||||||||  |||||| ||||    
T  26161077 atttcatcgtctctgaacgactctgtttgttttgattttctgtcttagtgc 26161127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 44482802 - 44482757
Alignment:
Q  228 caggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| ||||||| |||||||||||| |||| |||||||||    
T  44482802 caggttgaaatattagctttgagcaagtgcagatccgatcaatgac 44482757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 17221661 - 17221752
Alignment:
Q  30 gaattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||||| |||||||||| | ||||||| ||||| || |  ||||||||||||  || ||| ||||| |||||||  ||||||||||||    
T  17221661 gaattttgaccaaaaatcacccctctgaattg-ttttcattatactctaattgaatatatgattttcacatattttcaggtttctttcgtttg 17221752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 27535602 - 27535650
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||| |  || ||||||||||||||| ||||||||||||    
T  27535602 tgcggtgtttatttgactcaagttgaaagattagctttgagcaagtgca 27535650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 18653879 - 18654019
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||||||||||||||| |||||||||||||| || |||||    
T  18653879 atttcgtcgtctctgcacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcatagtgcggtgtttatttgattcaggt 18653978  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||| | |||||||||||| |||| |||||||||    
T  18653979 tgaaaaattaggtttgagcaagtgcagatccgatcaatgac 18654019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 273
Target Start/End: Complemental strand, 39179947 - 39179712
Alignment:
Q  35 ttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnat 134  Q
    ||||||| ||||||||| |  ||||| ||||||||||| ||||||||||||||||| |||| |||| ||||| || ||||||||||||          ||    
T  39179947 ttgaccctaaatcacccctccgaattatttttccttctattctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--at 39179851  T
Q  135 ttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttg 234  Q
    ||||||||||||| |||||||||||||||||||||||   |||||||||   |||||||| |||||||||| || |||||||||||||| || |||||||    
T  39179850 ttcgtcgtctctgaacgactctgtttgttttgatttcccatctttgtgcggagtgttttttatttcccatcctagtgcggtgtttatttgattcaggttg 39179751  T
Q  235 aaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||| |||||||||| | |||| |||||||||    
T  39179750 aaagactagctttgagcaagtgtagatccgatcaatgac 39179712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 3740367 - 3740594
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    ||||||| |||| ||||||||||| |||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||          |||||||||    
T  3740367 aaaatcatccatctgaattgtttt-ccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttgtgtg--atttcgtcg 3740462  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||  |||||||||||||||||||||||  ||||||||||  |||||||||| |||||| ||  | ||||||||||||||||| ||||||||||||||    
T  3740463 tctctaaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgttttcccgtctgagtgcggtgtttatttaattcaggttgaaagatt 3740562  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||||||| |||| |||| |||||||||    
T  3740563 agctttgagcaactgcagatccgatcaatgac 3740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 6281041 - 6281281
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| | |||||| ||||||||||| ||||||||||||||||| |||  |||| |||||  | ||||||||||||           
T  6281041 aattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgatttt-acatattttctattttctttcgtttgtttttgt 6281139  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||  ||||||||||||||||||||||   || |||||||  ||||||||||||||||| || || |||| ||||||||| || ||    
T  6281140 g--atttcgtcgtctctagacgactctgtttgttttgatttaccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattca 6281237  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  6281238 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 6281281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 28040626 - 28040866
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |   ||| |||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  28040626 aattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 28040724  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| ||||||||||||||||| ||||   ||||||||||| |||||||||||||||| ||| || || ||||||||||| || ||    
T  28040725 g--atttcgtcgtctctgaacgactctgtttgttttaattttccgtctttgtgcattgtgtttttgatttcctatcttagtgtggtgtttatttgattca 28040822  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||| ||||||||||||||||||||||||| |||||||||    
T  28040823 ggtttaaatattagctctgagcaagtgcaaatccgatcaatgac 28040866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 56 - 273
Target Start/End: Complemental strand, 33164566 - 33164352
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    |||||||||||||||||    |||||||||||||| |||| |||| ||||| || ||||||||||||          ||||||||||||||| |||||||    
T  33164566 gaattgtttttccttctaccttaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcgtctctgaacgactc 33164470  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  |||||||||||  |||||||||||||||| || || |||||||||||||| || |||||||||||||||||| ||| ||||     
T  33164469 tgtttgttttgatttcccgtctttgtgcagcgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgaacaaga 33164370  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  33164369 gcagatccgatcaatgac 33164352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 34431057 - 34431295
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||| || |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  34431057 aattttgacccaaaaatcacccattcgaattgttttttcttctattttaattgaataagtgatttc-acatattttctgttttctttcgtttgattttgt 34431155  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||  || || |||||||||||||| || ||    
T  34431156 g--atttcgtcgtctttgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcggtgtttatttgattca 34431253  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||  |||||| || |||||||||||| |||| |||||||||    
T  34431254 ggttg--agattaactttgagcaagtgcagatccgatcaatgac 34431295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7771845 - 7771705
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  |||||||||||||| ||||| || |||||||||||||| || || ||    
T  7771845 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgctgtgtgtttttgattttccatcttagtgcggtgtttatttgattcaagt 7771746  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || |||||||||||| |||| |||||||||    
T  7771745 tgaaagattaactttgagcaagtgcagatccgatcaatgac 7771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 17331325 - 17331565
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || |||||||||||||| |  |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  17331325 aattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 17331423  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  17331424 g--atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 17331521  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| | ||| |||| ||| |||| | |||||||    
T  17331522 ggttgaaagattagttttgaacaagagcagatccgaccaatgac 17331565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 133 - 263
Target Start/End: Original strand, 12891773 - 12891903
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||| |||||||||||||||||||||| ||||||||  ||||||||||  ||||||||| |||| ||||| || |||||||||||||| ||||||||    
T  12891773 atttcgttgtctctgcacgactctgtttgtattgatttcacgtctttgtgcggtgtgtttttaattttccatcttagtgcggtgtttatttgatccaggt 12891872  T
Q  233 tgaaagattagctctgagcaagtgcaaatcc 263  Q
    ||||||||||||| |||||||||||| ||||    
T  12891873 tgaaagattagctttgagcaagtgcagatcc 12891903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 40 - 278
Target Start/End: Original strand, 17687212 - 17687447
Alignment:
Q  40 ccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgt 139  Q
    ||||||||||| ||  || |||||||||||||| |  |||||||||||||  |||| |||| |||||||| |||||| |||||          |||||||    
T  17687212 ccaaaatcaccaatccgagttgtttttccttctatcttaattgaataagttatttc-acatattttcagttttcttttgtttgtttttgtg--atttcgt 17687308  T
Q  140 cgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaaga 239  Q
     |||||||||||||||||||| ||||||||||  || |||||||| |||||||||||||||||||| || | |||||||||||| || ||| ||||||||    
T  17687309 tgtctctgcacgactctgtttcttttgatttcccgtttttgtgcagtgtgtttttgatttcccatcttagtacggtgtttatttgattcagattgaaaga 17687408  T
Q  240 ttagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||  | ||||||| |||| |||| ||||||||||||||    
T  17687409 ttaaatttgagcaaatgcatatccgatcaatgactttga 17687447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 11734843 - 11734703
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||| ||||||||| || ||| |    
T  11734843 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcagat 11734744  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || |||| |||| |||| |||||||||    
T  11734743 tgaaagattagctttgcgcaactgcagatccgatcaatgac 11734703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 32347738 - 32347598
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||| |||| ||||||||||| |||||||||||  ||||||||||  ||||||||||||||||| || || | ||||||||||||||| || ||    
T  32347738 atttcgtcgtttctgaacgactctgttggttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtacggtgtttatttaattcaagt 32347639  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| ||| |||||    
T  32347638 tgaaagattagctttgagcaagtgcagatccgatcgatgac 32347598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 17699550 - 17699790
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  17699550 aattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttc-acatcttttctgttttctttcgtttgtttttgt 17699648  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| | |||| | |||||||||||||| |||||||| ||  ||||||||| ||||||| || || |||   |||||||| || ||    
T  17699649 g--atttcgtcgtctctgaatgactatatttgttttgatttcctgtctttgcgcggtgtgttttttatttcccgtcttagtgcatcgtttatttgattca 17699746  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| ||||||||| || |||  |||||||||    
T  17699747 ggttgaaagattagctttgagcaagtacagatctgatcaatgac 17699790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 23428349 - 23428489
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | |||| ||||||||||||||||  ||||||||||  ||||||||||||||| | || || |||||||||||||| || |||||    
T  23428349 atttcgtcgtctctgaatgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttctcgtcttagtgcggtgtttatttgattcaggt 23428448  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     |||||||||||| |||||||||| | |||| |||||||||    
T  23428449 agaaagattagctttgagcaagtgtagatccgatcaatgac 23428489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 12215232 - 12215372
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||||  |||||||||||||||||||||||  |||||||| ||   |||||||||||||| |||| ||||||||||||||||| ||  | ||    
T  12215232 atttcgtcgtctc--cacgactctgtttgttttgattttctgtctttgagcggggtgtttttgatttctcatcttaatgcggtgtttatttgattta-gt 12215328  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||||| | |||||||||||| |||| ||||||||||||    
T  12215329 tgaaagattagttttgagcaagtgcatatccgatcaatgacttt 12215372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 32309260 - 32309404
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||||||| |||||||||| |||||||||||||||| || ||||||| |||||||| ||||||| || || || | || | ||||||| || ||||    
T  32309260 atttcgtcgtctttgcacgactcagtttgttttgatttctcgtatttgtgcgatgtgtttgttgattttccgtcttagtacgatatttatttgattcagg 32309359  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||| ||||||| || |||||||||||||||| |||||||||||||    
T  32309360 ttgtaagattaactttgagcaagtgcaaatcgaatcaatgacttt 32309404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 17096263 - 17096125
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| ||||||||||||||||||||||   ||||||||||  |||||||  |||||||| || || | |||||||||||| || |||||    
T  17096263 attttgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcggtgtgttt--gatttcccgtcttagtacggtgtttatttgattcaggt 17096166  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||| |||| |||| |||||||||    
T  17096165 tgaaagattagctttgagcaaatgcagatccgatcaatgac 17096125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 136 - 273
Target Start/End: Complemental strand, 26295078 - 26294941
Alignment:
Q  136 tcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttga 235  Q
    |||||||||||| ||||||||||||||||||| |||  |||||| ||| |||||| |||||||| || || || |||||||||||||| || ||||||||    
T  26295078 tcgtcgtctctgaacgactctgtttgttttgacttcccgtctttttgcgatgtgtctttgattttccgtcttagtgcggtgtttatttgattcaggttga 26294979  T
Q  236 aagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    || ||||| | |||||||||||| |||  |||||||||    
T  26294978 aatattagttttgagcaagtgcagatctgatcaatgac 26294941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 178130 - 177988
Alignment:
Q  133 atttcgtcgtctctgc--acgactctgtttgttttgatttcttgtctttgtgcaatgtgttttt-gatttcccatcataatgcggtgtttatttaatcca 229  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||||||||  ||||||||| |||||||| || |  |||||||||||||| || ||    
T  178130 atttcgtcgtctctgcgcacgactctgtttgttttgatttcctggctttgtgcggtgtgttttttgatttcccgtcgtggtgcggtgtttatttgattca 178031  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||| | |||  |||||||||    
T  178030 ggttgaaagattagct-tgagcaagtgtagatctgatcaatgac 177988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 2555374 - 2555234
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  || |||||||  ||| ||||| |||| || || || || ||||||||||| || |||||    
T  2555374 atttcgtcgtctctgaacgactctgtttgttttgatttccagtatttgtgcggtgtattttttattttccgtcttagtgtggtgtttatttgattcaggt 2555275  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| |||| ||||||| |||| |||||||||    
T  2555274 tgaaatattagctttgagaaagtgcagatccgatcaatgac 2555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 149 - 273
Target Start/End: Complemental strand, 17732394 - 17732270
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    |||||| |||||||||| ||||   ||||||||||  ||||||||| |||||||||| || |||||||||||||| || || ||||||||||||||| ||    
T  17732394 acgactttgtttgtttttattttccgtctttgtgcggtgtgttttttatttcccatcttagtgcggtgtttatttgattcaagttgaaagattagctttg 17732295  T
Q  249 agcaagtgcaaatccaatcaatgac 273  Q
    |||||||| |||||| |||||||||    
T  17732294 agcaagtgtaaatccgatcaatgac 17732270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 20483283 - 20483423
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || || ||||||||||||||||||| | |||||||||   ||||||||||||||||| || || | |||||||||||| |  || ||    
T  20483283 atttcgtcgtctttgaacaactctgtttgttttgatttatcgtctttgtgtggtgtgtttttgatttcccgtcttagtacggtgtttatttgactcaagt 20483382  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||||||| |||| |||||||||    
T  20483383 tgaaagattagctttgatcaagtgcagatccgatcaatgac 20483423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 23882140 - 23882000
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||| ||||||||||| |||||| |||||| |||  ||| |||||||||| |  || || |||||||||||||| || |||||    
T  23882140 atttcgtcgtctctgaacgaccctgtttgtttttatttctcgtctttatgcggtgtttttttgattttcagtcttagtgcggtgtttatttgattcaggt 23882041  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || ||||||||| || |||| |||||||||    
T  23882040 tgaaagattaactttgagcaagtacagatccgatcaatgac 23882000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 27241061 - 27241301
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| | |||||||||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  27241061 aattttgacccaaaaatcacccctctgaattgtttttccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 27241159  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || |||||  ||||| ||||||||||  ||||||||||  ||||||| ||||||||| |  || |  ||||||| ||| || ||    
T  27241160 a--atttcgtcgtctttgaacgaccttgtttattttgatttcccgtctttgtgcggtgtgtttctgatttcccgttttagtatggtgtttgtttgattca 27241257  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||||||||||| ||| |||||||| |||| |||||||||    
T  27241258 ggttcaaagattagctttgatcaagtgcagatccgatcaatgac 27241301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 29097886 - 29098026
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||||||||||||||||||||   |||||||||  ||| ||||| ||||||| || || |||||||||||||| || |||||    
T  29097886 atttcgtcgtctttgaacgactctgtttgttttgatttcccatctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggt 29097985  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| ||| |||| ||| |||| |||||||||    
T  29097986 tgaaaaattagctttgaacaagagcagatccgatcaatgac 29098026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 6635246 - 6635485
Alignment:
Q  31 aattttgacccaaaa-tcacccatt-tgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnn 128  Q
    ||||||||||||||| ||||||  | ||| |||||||||||||| |  |||||||||||||| |||| |||| ||||| || |||||| |||||          
T  6635246 aattttgacccaaaaatcaccctctctgagttgtttttccttctatcataattgaataagtgatttc-acatattttctgttttctttagtttgtttttg 6635344  T
Q  129 nnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcc 228  Q
        ||||||||||||||| ||||||||||||||||||||||    |||||||  || |||| |||||||| || || || |||||||||||||| || |    
T  6635345 tg--atttcgtcgtctctgaacgactctgtttgttttgattttccttctttgt--aaggtgtgtttgattttccgtcttagtgcggtgtttatttgattc 6635440  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    | ||||||||||||||| ||||||| |||| |||| |||||||||    
T  6635441 aagttgaaagattagctttgagcaaatgcagatccgatcaatgac 6635485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 273
Target Start/End: Original strand, 43493979 - 43494097
Alignment:
Q  155 ctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaag 254  Q
    ||||||||||||||||| ||||||||| |  |||||||||||||| || |  || |||||||||||||| || |||||||||||| || || ||||||||    
T  43493979 ctgtttgttttgatttcctgtctttgtacggtgtgtttttgattttccgttttagtgcggtgtttatttgattcaggttgaaagactaactttgagcaag 43494078  T
Q  255 tgcaaatccaatcaatgac 273  Q
    |||| ||||||||||||||    
T  43494079 tgcatatccaatcaatgac 43494097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 276
Target Start/End: Original strand, 25962034 - 25962159
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||| ||||| | || || ||| |||||||||| || |||||||||||||||| | ||||    
T  25962034 gactctgattgttttgatttctcgtctttgtgcgctgtgtttttaatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgag 25962133  T
Q  251 caagtgcaaatccaatcaatgacttt 276  Q
    |||||||| |||  ||||||||||||    
T  25962134 caagtgcagatctgatcaatgacttt 25962159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 42396536 - 42396411
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||| ||||||||||||||||| | |||||||||  |||||||||||||||||| || || |||| ||||||||| || || |     
T  42396536 atttcgtcgtctctgaacgaatctgtttgttttgatttttcgtctttgtgtgatgtgtttttgatttcccgtcttagtgcgatgtttatttgattcatgc 42396437  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    | ||| ||||||| ||||||||||||    
T  42396436 tcaaatattagctttgagcaagtgca 42396411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 174 - 278
Target Start/End: Original strand, 39915631 - 39915735
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  | ||||||| ||||||  ||||| |||||||||||||| || |||||||||||||||||| |||||||||||| ||||||||||| ||    
T  39915631 gtctttgtgcggtatgttttttatttcctgtcatagtgcggtgtttattttattcaggttgaaagattagctttgagcaagtgcatatccaatcaataac 39915730  T
Q  274 tttga 278  Q
    |||||    
T  39915731 tttga 39915735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 35276012 - 35275866
Alignment:
Q  133 atttcgtcgtctctgcacgactctg-tttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccag 230  Q
    |||| ||||||| |||||||||||  |||||||||||||   ||||||||||| ||||||| |||||||||| || | ||||| ||||||||| || | |    
T  35276012 attttgtcgtctttgcacgactctaatttgttttgatttaccgtctttgtgcagtgtgtttgttgatttcccgtctttatgcgatgtttatttgattccg 35275913  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||| |||||| ||||||||| || ||||||||||| ||||||    
T  35275912 gttgaaaggttagctttgagcaagtacagatccaatcaataactttg 35275866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 6681900 - 6681760
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||| |||||| |||| ||||||||||||||||||   ||||||||||  ||| ||||| ||||| | || || |||| |||||||||  |||||||    
T  6681900 atttcgttgtctctacacggctctgtttgttttgatttaccgtctttgtgcggtgtattttttatttctcgtcttagtgcgatgtttatttgttccaggt 6681801  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| | |||| ||| |||||||| |||||||||    
T  6681800 tgaaagattagttttgagtaagcgcaaatccgatcaatgac 6681760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 276
Target Start/End: Original strand, 14535018 - 14535138
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||| ||||||||||  ||||||||||  ||||||||| ||||| |||| ||||||||||||||||| || | | |||||||||| ||| ||| |||||    
T  14535018 tgtttattttgatttcccgtctttgtgcggtgtgttttttatttctcatcttaatgcggtgtttatttgattcggattgaaagattggctttgatcaagt 14535117  T
Q  256 gcaaatccaatcaatgacttt 276  Q
    | | || ||||||||||||||    
T  14535118 gtagattcaatcaatgacttt 14535138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 42609241 - 42609381
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| || ||| || |||||||||||||  ||||||||||  ||||||||||||||| | || || |  | ||||||||| || || ||    
T  42609241 attttgtcgtctctgaacaactttgattgttttgatttcccgtctttgtgcggtgtgtttttgatttcacgtcttagtatgatgtttatttgattcatgt 42609340  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| || | |||||||||    
T  42609341 tgaaagattagctttgagcaagtgcatattcgatcaatgac 42609381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 980999 - 980913
Alignment:
Q  187 gtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||||| ||||| || || |||||||||||||| || |||||||||||||||||| |||||||||||| |||| | |||||||    
T  980999 gtgtgtttgacttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaagtgcagatccgagcaatgac 980913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 11858048 - 11858137
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    ||||||||||  ||| ||||| ||||||| || || |||||||||||||| || ||||||||||||||| || |||||||||||| ||||    
T  11858048 gtctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagtgcagatcc 11858137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 276
Target Start/End: Complemental strand, 17523518 - 17523403
Alignment:
Q  162 ttttgatttcttgtctttgtgcaatgtgt-ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaa 260  Q
    |||| ||||| ||||||||||   ||||| |||| ||||||| || || |||||||||||||| || ||||| |||||||||| | ||| ||||||||||    
T  17523518 ttttaatttcctgtctttgtgaggtgtgtatttttatttcccgtcttattgcggtgtttatttgattcaggtcgaaagattagttttgatcaagtgcaaa 17523419  T
Q  261 tccaatcaatgacttt 276  Q
    | |||| |||||||||    
T  17523418 ttcaattaatgacttt 17523403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 272
Target Start/End: Complemental strand, 39531418 - 39531295
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    ||||||||| |||||||||||||  |||||||  |  ||||||||| ||||||  || || | || ||||||||| || | |||||||||||||||| ||    
T  39531418 acgactctgattgttttgatttcccgtctttggacggtgtgttttttatttccactcttagtacgatgtttatttgattcgggttgaaagattagctttg 39531319  T
Q  249 agcaagtgcaaatccaatcaatga 272  Q
    || ||||||| |||| ||||||||    
T  39531318 agaaagtgcagatccgatcaatga 39531295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 277
Target Start/End: Original strand, 7150852 - 7151052
Alignment:
Q  69 ttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgttttgat 168  Q
    ||||||| |||||||||||||  |||| |||| |||||||||||| ||||||||          | |||| ||||| | ||| |||||||||||||||||    
T  7150852 ttcttttttaattgaataagtaatttctacatattttcagtcttccttcgtttgtttttgtg--aattcgacgtctttacacaactctgtttgttttgat 7150949  T
Q  169 ttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatca 268  Q
    |||| ||||||||||  ||||||||| |||||      |  |||| ||||||||| || |||||||||||| | | | |||| |||| ||||| | ||||    
T  7150950 ttctcgtctttgtgctgtgtgttttttatttc------tcgtgcgatgtttatttgattcaggttgaaagactggttttgagtaagtacaaattcgatca 7151043  T
Q  269 atgactttg 277  Q
    |||||||||    
T  7151044 atgactttg 7151052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 35402132 - 35402257
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||| | ||||| ||||||||| |||||||||  ||||||||||   || |||||||||||  |||| | ||||  ||||||||| || |||||    
T  35402132 attttgtcgtgtttgcactactctgtttattttgattttatgtctttgtgtggtgcgtttttgatttttcatcctcatgcaatgtttatttgattcaggt 35402231  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    |||||||||| || ||| ||||||||    
T  35402232 tgaaagattaactttgaacaagtgca 35402257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 39915581 - 39915635
Alignment:
Q  57 aattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtctt 112  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||||    
T  39915581 aattgtttttccttcttt-ctacttgaataagtgatttccacatattttcagtctt 39915635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 26905737 - 26905671
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||| | |||||||  | || |||||||| ||||||||| |||||||||||||||||||||    
T  26905737 gaattgttttcctttctttttcagttaaataagtgatttccacatattttcagtcttctttcgtttg 26905671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 43493895 - 43493960
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||| ||||  || ||||||||||||    
T  43493895 gaattgtttttccttctattctaattgaataagtgattt-cacatattttttgttttctttcgtttg 43493960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 243
Target Start/End: Original strand, 18573429 - 18573526
Alignment:
Q  146 tgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattag 243  Q
    ||||||||| |||||||| |  ||||||||||||||||  |||| ||||| |||| | |  || |||||||||||||| || |||||||||| |||||    
T  18573429 tgcacgactttgtttgttatagtttcttgtctttgtgcggtgtgcttttgctttctcgttttagtgcggtgtttatttgattcaggttgaaaaattag 18573526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 25487705 - 25487850
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| |  ||||||||||||   |||| |||||||| | ||||| ||||||| || || |||  ||||||||| || |||||    
T  25487705 atttcgtcgtctttgtacgactttacttgttttgattttccgtctctgtgcaatttcttttttatttcccgtcttagtgcattgtttatttgattcaggt 25487804  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||||||| | || | | |||||||   | ||||||||||||||||    
T  25487805 tgaaagatcaactttaaacaagtgcgtctacaatcaatgactttga 25487850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 12439610 - 12439551
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaa 269  Q
    |||||||||||||| ||  ||||||||||||||||| |||||||||| | |||| |||||    
T  12439610 tgcggtgtttatttgatttaggttgaaagattagctttgagcaagtgaagatccgatcaa 12439551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 273
Target Start/End: Complemental strand, 3079300 - 3079218
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| ||||||| || || |||| ||||||||| || |  ||||||||||| ||| |||||||||||| |||| |||||||||    
T  3079300 ttttcatttcccgtcttagtgcgatgtttatttgattcgagttgaaagatttgctttgagcaagtgcagatccgatcaatgac 3079218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 374397 - 374518
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    |||| ||||| ||||||||||| |||||| |||  ||| ||||| |||| |  || || |||||||||| ||| || || ||||||||| || || |||     
T  374397 gactttgtttattttgatttctagtctttatgcggtgtattttttattttctgtcttagtgcggtgtttgtttgattcaagttgaaagagtaactttgat 374496  T
Q  251 caagtgcaaatccaatcaatga 272  Q
    |||||||| ||||| |||||||    
T  374497 caagtgcatatccagtcaatga 374518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 276
Target Start/End: Complemental strand, 39415596 - 39415535
Alignment:
Q  215 tgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||| || |||||||||||||||||| | | |||||||||||  ||| |||||||||    
T  39415596 tgtttatttgatgcaggttgaaagattagctttaatcaagtgcaaatttaataaatgacttt 39415535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 9196993 - 9196901
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttc-ttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||||||||| |||  ||| ||||||||||| ||| |||| ||||| | |||||| ||| ||||| |||| | |||| |||||||||    
T  9196993 aattttgacccaaaattacctttttaaattgtttttctttctttttttaattaagtaagtgattttcacatatttttaatcttatttcgtttg 9196901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 26240658 - 26240562
Alignment:
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||||| |||| || || || || | ||||||||| || ||||||||| ||||| || |||  || |||| || |||||||||||    
T  26240658 tttgtgcaatgtgttttttattttccgtcttagtgtgatgtttatttgattcaggttgaacgattaactttgatgaaatgcatattcaatcaatgac 26240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 13965557 - 13965797
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||||||||||||||| | ||||||||||||||| |||| |||| || |  || ||||||||||||           
T  13965557 aattttgacccaaaaatcaccccttcgaattgtttttccttctatcctaattgaataagtgatttc-acatattctatgttttctttcgtttgtttttgt 13965655  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| ||||||||| |||||||||||||  |||||||||| |||||||||| ||||||| || || |||||||||||||| ||  |    
T  13965656 g--atttcgtcgtctctgaacgactctgattgttttgatttcccgtctttgtgcgatgtgttttttatttcccgtcttagtgcggtgtttatttgattta 13965753  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  13965754 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 13965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 43244505 - 43244265
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| | |||||||||||||||||| | ||||||||||||||| |||| |||| |||||  | ||||||||||||           
T  43244505 aattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttc-acatattttcgattttctttcgtttgtttttgt 43244407  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| |||||||||| ||||||||||||||||| |||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  43244406 g--attttgtcgtctctgaacgactctgtttgttttaatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttcattca 43244309  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     ||||||||||||||| |||||||||||| |||| |||||||||    
T  43244308 agttgaaagattagctttgagcaagtgcatatccgatcaatgac 43244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 44757166 - 44756926
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||| || |||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||           
T  44757166 aattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttc-acatattttatgttttctttcgtttgtttttat 44757068  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||||| |||| ||||||||||||||||| ||||||||||  |||||||||||||| ||||| || |||||||||||||| || ||    
T  44757067 g--atttcgtcgtctctgcatgactttgtttgttttgatttctcgtctttgtgcggtgtgtttttgattttccatcttagtgcggtgtttatttgattca 44756970  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| |||  |||||||||||| |||| || ||||||    
T  44756969 ggttgaaagatcagcattgagcaagtgcagatccgattaatgac 44756926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 12717241 - 12716997
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    |||||||||||||||||| || |  || |||||||| ||||| | |||||| |||||||| ||||||||| |||||||| ||||||||||||            
T  12717241 aattttgacccaaaatcatccgtccgacttgttttttcttctatcctaattaaataagtgatttccacatattttcagttttctttcgtttgtttttgtg 12717142  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
      ||||| ||||||| |||||||||| ||||||||||||||| ||||||||||  |||||||||||||| || || || |||||||||||||| || |||    
T  12717141 --atttcttcgtctcagcacgactctatttgttttgatttctcgtctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcag 12717044  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||| |||||||| |||  ||||||| |||  || ||||||||||    
T  12717043 gttgaaggattagctttgattaagtgcagatctgattaatgactttg 12716997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 20400027 - 20399787
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||||   |||||| |||| ||||| | ||||||||||||||| |||| | || ||||| || |||||||||||            
T  20400027 aattttgacccaaaaatcacccacccgaattgctttttcttctatcctaattgaataagtgatttc-atatattttctgttttctttcgttt--attttt 20399931  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| ||||||||  |||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  20399930 gtgatttcgtcgtctctgaacgactcttcttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 20399831  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    | |||||||||||||| ||||||||||||||||| |||||||||    
T  20399830 gtttgaaagattagctttgagcaagtgcaaatccgatcaatgac 20399787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 394398 - 394158
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| | |||||| |||||||| |||| |||| ||||| |  ||||||||||||           
T  394398 aattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttc-acatcttttctgctttctttcgtttgtttctat 394300  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  | |||||||  |||||||||| ||||||| || || |||||||||||||| || ||    
T  394299 g--atttcgtcgtctctgaacgactctgtttgttttgatttcccgcctttgtgtgatgtgttttttatttcccgtcttagtgcggtgtttatttgattca 394202  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || |||||||||| | |||| |||||||||    
T  394201 ggttgaaagattaactttgagcaagtgtagatccgatcaatgac 394158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 7060333 - 7060560
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  ||||||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  7060333 aaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttc-acatattttatgttttctttcgtttgtttttgtg--atttcgtcg 7060429  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    ||| || |||||||||||| ||||||||||| ||||  ||||  ||||||||| ||||||| || ||||||||||||||||| || ||||||||||||||    
T  7060430 tctttgaacgactctgtttcttttgatttctcgtctc-gtgcggtgtgttttttatttcccgtcttaatgcggtgtttatttgattcaggttgaaagatt 7060528  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||||||||||| |||| |||||||||    
T  7060529 agctttgagcaagtgcagatccgatcaatgac 7060560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 29268901 - 29268661
Alignment:
Q  31 aattttgaccc-aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||| |||||||||| |  || |||||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  29268901 aattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 29268803  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| || ||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  29268802 g--atttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 29268705  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||  || |||| ||||||| |||||| |||||||    
T  29268704 ggttgaaagattgactttgaggaagtgcagatccaaccaatgac 29268661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 38944172 - 38944036
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || |||||    
T  38944172 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggt 38944073  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaa 269  Q
    ||||||| ||||| |||||||||||| |||| |||||    
T  38944072 tgaaagaatagctttgagcaagtgcagatccgatcaa 38944036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 273
Target Start/End: Complemental strand, 7083928 - 7083696
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| | |||||||||||||||||| |  |||||||||||||| |||| |||| |||||  | ||||||||||||          |||||||||    
T  7083928 aaaatcacccctatgaattgtttttccttctatcataattgaataagtgatttc-acatattttctattttctttcgtttgtttttgtg--atttcgtcg 7083832  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtt----tatttaatccaggttgaaa 237  Q
    |||||| |||||||||||||||||||||||  |||||||| |  ||||||||||||||||| || || |||||||||    ||||| || ||||||||||    
T  7083831 tctctgaacgactctgtttgttttgatttcccgtctttgtacggtgtgtttttgatttcccgtcctagtgcggtgtttatatatttgattcaggttgaaa 7083732  T
Q  238 gattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||| |||||||||||| |||| |||||||||    
T  7083731 gattagctttgagcaagtgcagatccgatcaatgac 7083696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 24825675 - 24825886
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgt 158  Q
    |||||||||||||| | ||||||||||||||| |||| |||| |||||  | ||||||||||||          |||||||||||| |||||||||||||    
T  24825675 ttgtttttccttctatcctaattgaataagtgatttc-acatattttctattttctttcgtttgtttttgtg--atttcgtcgtctttgcacgactctgt 24825771  T
Q  159 ttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||  ||||||||||  ||||| |||||||| || || || |||||| ||||||| || |||||||||||||||||| ||||||||||||    
T  24825772 ttgttttgatttcccgtctttgtgcggtgtgtatttgattttccgtcttagtgcggtctttatttgattcaggttgaaagattagctttgagcaagtgca 24825871  T
Q  259 aatccaatcaatgac 273  Q
     |||| |||||||||    
T  24825872 gatccgatcaatgac 24825886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 22757117 - 22757331
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||||| | ||||||||||||||| |||| |||| ||||  || || |||||||||          |||||||||||| || |||||||    
T  22757117 gaattgtttttccttctatcctaattgaataagtgatttc-acatattttatgttttttttcgtttgtttttgtg--atttcgtcgtctatgaacgactc 22757213  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||||  || || |||||||||||||| || |||||||||||||||||| ||||||| |    
T  22757214 tgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcctgtcttagtgcggtgtttatttgattcaggttgaaagattagctttgagcaaat 22757313  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  22757314 gcagatccgatcaatgac 22757331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 43493311 - 43493186
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  || ||||||||||||||||| || ||| |||||||||| || |||||    
T  43493311 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgcgtttttgatttcccatcttagtgctgtgtttatttgattcaggt 43493212  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||| ||||||||||||    
T  43493211 tgaaagattagctttgagcaagtgca 43493186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 478036 - 477896
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||  |||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  478036 atttcgttttctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 477937  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| |||||||||||| ||||||||||||||    
T  477936 tgaaaaattagctttgagcaagtgcagatccaatcaatgac 477896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 6881965 - 6882193
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| || || || ||||||||||| | |||||| |||||||| |||| |||| ||||| || ||||||||||||          |||||||||    
T  6881965 aaaatcaccccttcgagttatttttccttctatcctaattaaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcg 6882061  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| ||  |||||||||||||||||||  |||||| |||  ||||||||| |||| || || ||||||||||||||||| || ||||||||||||||    
T  6882062 tctctgaacatctctgtttgttttgatttcccgtctttttgcgttgtgttttttattttccgtcttaatgcggtgtttatttgattcaggttgaaagatt 6882161  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||||||||||| |||| |||||||||    
T  6882162 agctatgagcaagtgcagatccgatcaatgac 6882193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 8712627 - 8712771
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| | |||||||||||||||||||||  ||||||||||  ||||||||||| ||||| || || |||| ||||||||| || |||||    
T  8712627 atttcgtcatctctgaatgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgagttcccgtcttagtgcgatgtttatttgattcaggt 8712726  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  8712727 tgaaagattagctttgagcaagtgcagatccgatcaatgactttg 8712771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 22049528 - 22049284
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    ||||||||||||||||||||| || ||||||||||||||||| | ||||||||||||||| ||||||||| |||||||| ||||||| |||             
T  22049528 aattttgacccaaaatcaccctttcgaattgtttttccttctatcctaattgaataagtgatttccacatattttcagttttctttcattt--attttta 22049431  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccag 230  Q
       |||||| |||||||||| ||| ||||||||||||||||| | |||||| |  ||||||||| ||||| | || || |||||||||||||| ||  ||    
T  22049430 tggtttcgttgtctctgcacaactgtgtttgttttgatttctcgcctttgtccggtgtgttttttatttcacgtcttagtgcggtgtttattttatttag 22049331  T
Q  231 gttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    | |  ||||||| || | |||||||||| |||| |||||||||||||    
T  22049330 gattgaagattaactttaagcaagtgcagatccgatcaatgactttg 22049284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 26742587 - 26742347
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  |||||||||||| |||| |  |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  26742587 aattttgacccaaaaatcacccatccgaattgtttttctttctatcttaattgaataagtgatttc-acatattttctgttttctttcgtttgttttcgt 26742489  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| ||||||| || |||||||||| ||||||||||||  ||||||||||  |||| |||||||||||| || || |||||||||||||| || ||    
T  26742488 g--attttgtcgtctttgaacgactctgtatgttttgatttcccgtctttgtgcggtgtgattttgatttcccgtcttagtgcggtgtttatttgattca 26742391  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    | |||||||||||||| |||||||||| | |||| |||||||||    
T  26742390 gattgaaagattagctttgagcaagtgtagatccgatcaatgac 26742347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 20887780 - 20887641
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||| ||||||||| ||||||| || || |||| |||||| || || ||| |    
T  20887780 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccgtcttagtgcgatgttta-ttgattcagat 20887682  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||| ||||||||| |||||||||    
T  20887681 tgaaagattagctttgagcaaatgcaaatccgatcaatgac 20887641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 51152134 - 51152361
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  ||||||||||||||||| | |||||| |||||||| |||| |||| ||||| |  ||||||||||||          ||||||||     
T  51152134 aaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttc-acatattttctgctttctttcgtttgttttgtg---atttcgtca 51152229  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| ||||||| |||||||||||||||  ||||||||||  ||||||||||||||||| |  || | |||||||||||| || |||||||||| |||    
T  51152230 tctctgaacgactccgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgttttagtacggtgtttatttgattcaggttgaaaaatt 51152329  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||||||||||| |||| |||||||||    
T  51152330 agctttgagcaagtgcagatccgatcaatgac 51152361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 626671 - 626434
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||||| |||||| |||||| |||| |  |||||||||||||| ||  ||||| ||||| || ||||||||||||           
T  626671 aattttgacccaaaaatcacccatctgaattatttttc-ttctatcataattgaataagtgatt--cacatattttctgttttctttcgtttgtttttgt 626575  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||| ||| || ||||||||| |||||||||||||| ||||||||||  ||||||||| ||||||| |  || |||||||||||||| || ||    
T  626574 g--atttcgtcctctgtgaacgactctgattgttttgatttctcgtctttgtgcggtgtgttttt-atttcccgtactagtgcggtgtttatttgattca 626478  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| | |||||||    
T  626477 ggttgaaagattagctttgagcaagtgcagatccgaccaatgac 626434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 29922934 - 29923072
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||||||  |||||||  ||||| || || || | |||||||||||| || |||||    
T  29922934 attttgtcgtctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgttt--gattttccgtcttagtacggtgtttatttgattcaggt 29923031  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  29923032 tgaaagattagctatgagcaagtgcagatccgatcaatgac 29923072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7861230 - 7861090
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||  ||||||| |||||  ||||| |||| |||||||||||||||||| || || |||||||||||||| || |||||    
T  7861230 atttcgtcgtctctgaacgactctacttgttttaatttcccgtcttcgtgcgatgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggt 7861131  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || | |||||||||| |||| |||||||||    
T  7861130 tgaaagattaactttaagcaagtgcagatccgatcaatgac 7861090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 13586264 - 13586124
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| |||||||||||||||||||||||  ||||| |||   ||||| |||||||| || || || |||||||||||||| || |||||    
T  13586264 atttcgtcatctctgaacgactctgtttgttttgatttcccgtcttcgtgttgtgtgtgtttgattttccgtcttagtgcggtgtttatttgattcaggt 13586165  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  13586164 tgaaagattagctttgagcaagtgcagatccgatcaatgac 13586124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 28837162 - 28837302
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||||   |||||||||||||| |  || || ||||||||||||||||| || ||    
T  28837162 atttcgtcgtctctgcacgacgctgtttgttttgatttcccgtctttgtgtggtgtgtttttgattttctgtcttagtgcggtgtttatttaattcacgt 28837261  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||| | |||| | |||||||    
T  28837262 tgaaagattagctttgagcaagtgaagatccgaacaatgac 28837302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 11210337 - 11210228
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||||   ||||||||||| ||||||||||| ||||| || || |||||||||||||| || |||||    
T  11210337 atttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcagtgtgtttttgagttcccgtcttagtgcggtgtttatttgattcaggt 11210238  T
Q  233 tgaaagatta 242  Q
    ||||||||||    
T  11210237 tgaaagatta 11210228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 273
Target Start/End: Complemental strand, 24568838 - 24568597
Alignment:
Q  30 gaattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnn 128  Q
    |||||||||||||||| |||||| |  ||||| ||||||||||| | ||||||||||||||| |||  |||| || || || || |||||||||          
T  24568838 gaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgatttt-acatattatctgttttatttcgtttgtttttg 24568740  T
Q  129 nnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcc 228  Q
        |||||||||| |||| ||||||| |||||||||||||||  ||||||||||  ||||||||| |||| || || || || ||||||||||| || |    
T  24568739 tg--atttcgtcgtatctgaacgactccgtttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtggggtgtttatttgattc 24568642  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||||||| |||| ||||||| |||| |||||||||    
T  24568641 aggttgaaagattagctttgagaaagtgcagatccgatcaatgac 24568597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 269
Target Start/End: Original strand, 25658191 - 25658400
Alignment:
Q  57 aattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactct 156  Q
    |||||||||||||||||| |||||| |||||||| |||| |||| ||||| || ||||||||| ||          ||||||||||||||| |||||| |    
T  25658191 aattgtttttccttctttcctaatttaataagtgatttc-acatattttctgttttctttcgtatgtttttgtg--atttcgtcgtctctgaacgacttt 25658287  T
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    |||||||||||||||  ||||||||||  ||||||||| |||| || || || |||| ||||||||| ||  | ||||||||||||||| ||||||||||    
T  25658288 gtttgttttgatttcacgtctttgtgcggtgtgttttttatttgccgtcttagtgcgatgtttatttgatttatgttgaaagattagctttgagcaagtg 25658387  T
Q  257 caaatccaatcaa 269  Q
    || |||| |||||    
T  25658388 cagatccgatcaa 25658400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 36124373 - 36124232
Alignment:
Q  133 atttcgtcgtctctgcacgactctgttt-gttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    ||||||||||||||| ||||||| |||| ||||||||||   || |||||||| ||| ||||| ||||||| || || |||||||||||||| || ||||    
T  36124373 atttcgtcgtctctgaacgactcagttttgttttgattttccgtttttgtgcagtgtattttttatttcccgtcttagtgcggtgtttatttgattcagg 36124274  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| ||||||||||||||| | |||||||||    
T  36124273 ttgaaagattagctttgagcaagtgcaaattcgatcaatgac 36124232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 45351094 - 45350969
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| || ||||||||||||||||||||  ||||||||||  |||||||||||||||||||| || || ||||||||||| |  || ||    
T  45351094 atttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcttagtgtggtgtttatttgactcaagt 45350995  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||| ||| ||||||||    
T  45350994 tgaaagattagctttgatcaagtgca 45350969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 258
Target Start/End: Complemental strand, 45360573 - 45360448
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| || ||||||||||||||||||||  ||||||||||  |||||||||||||||||||| || || ||||||||||| |  || ||    
T  45360573 atttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcttagtgtggtgtttatttgactcaagt 45360474  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||| ||| ||||||||    
T  45360473 tgaaagattagctttgatcaagtgca 45360448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 26674469 - 26674609
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| |||||| ||||||||||||||||  |||||||||   ||||||||||||||||| || || ||  ||| |||||| || |||||    
T  26674469 atttcgtcatctctgaacgactttgtttgttttgatttcccgtctttgtgtggtgtgtttttgatttcccgtcttagtgtcgtgcttatttgattcaggt 26674568  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  26674569 tgaaagattagctttgagcaagtgcagatccgatcaatgac 26674609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 27394927 - 27395067
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||| || |||||||||||||   |||| ||||  ||||||||||||| ||| || || |||||||||||||| || |||||    
T  27394927 atttcgtcgtctctgaacgactttgattgttttgatttcccttcttcgtgcggtgtgtttttgattccccgtcttagtgcggtgtttatttgattcaggt 27395026  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| | |||||||||| |||| |||||||||    
T  27395027 tgaaagattagctttaagcaagtgcagatccgatcaatgac 27395067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 30202135 - 30202275
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||| |  ||||||||||||||||| |  || ||| ||| |||||| || || ||    
T  30202135 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtacggtgtgtttttgatttcccgttttagtgcagtggttatttgattcaagt 30202234  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| |||| |||||||||||| |||||||||    
T  30202235 tgaaaaattagctttgaggaagtgcaaatccgatcaatgac 30202275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 50801314 - 50801454
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||||||||||| | |||||||| |||||| || || ||| |||||||||| || |||||    
T  50801314 atttcgtcgtctctgaacgactctgtttgttttgattccccgtctttgtgcagtttgtttttggtttcccgtcttagtgctgtgtttatttgattcaggt 50801413  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  | |||||||||||| |||  |||||||||    
T  50801414 tgaaagattaattttgagcaagtgcagatctgatcaatgac 50801454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 276
Target Start/End: Original strand, 22121543 - 22121686
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| || ||| ||||| ||| | ||||||||||||||| ||||||||||||||||||||||||| | | || ||||| ||||||||||| || || ||    
T  22121543 atttcatcatctttgcaccactttatttgttttgatttctcgtctttgtgcaatgtgtttttgattacacgtcttaatgtggtgtttatttgattcaagt 22121642  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||| ||||||| |||||||||||| ||  |||||||||||||    
T  22121643 tgaaatattagctttgagcaagtgcatatttaatcaatgacttt 22121686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 5814444 - 5814587
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtc-tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||||||||||||||||||||||||||||||||||  ||| ||||||   ||||||||| ||||  | || || ||| |||||||||| || ||||    
T  5814444 atttcgtcgtctctgcacgactctgtttgttttgatttcccgtcctttgtgg--tgtgttttttatttttcgtcttagtgcagtgtttatttgattcagg 5814541  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||||||||| |||||||||||| || | |||||||||||||    
T  5814542 ttgaaagattagctttgagcaagtgcagattcgatcaatgactttg 5814587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 6911777 - 6911917
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||  |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||  || || ||| |||||||||| || |||||    
T  6911777 atttcttcgtctctaaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcagtgtttatttgattcaggt 6911876  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||| ||| |||| |||||||||    
T  6911877 tgaaagattagctttgaacaagagcagatccgatcaatgac 6911917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 19745487 - 19745626
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| ||||||||||||||||||||||   ||||||||||  ||||||||| ||||||| || || || ||||||| ||| || |||||    
T  19745487 atttagtcgtctctgaacgactctgtttgttttgatttgc-gtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttgtttgattcaggt 19745585  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| || ||||||    
T  19745586 tgaaagattagctttgagcaagtgcagatccgattaatgac 19745626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 19794319 - 19794180
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| |||||||||| ||||||||||||||||||||||   ||||||||||  ||||||||| ||||||| || || || ||||||| ||| || |||||    
T  19794319 atttagtcgtctctgaacgactctgtttgttttgatttgc-gtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttgtttgattcaggt 19794221  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| || ||||||    
T  19794220 tgaaagattagctttgagcaagtgcagatccgattaatgac 19794180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 24611823 - 24611684
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||| |||||||| |||||||||||||||||||||| | ||||||||||  ||||||||| ||||| | || || ||||||| |||||| || |||||    
T  24611823 atttcgacgtctctgaacgactctgtttgttttgatttttcgtctttgtgcgttgtgtttttcatttctcgtcttagtgcggtg-ttatttgattcaggt 24611725  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || |||||||||||| |||  |||||||||    
T  24611724 tgaaagattaactttgagcaagtgcagatctgatcaatgac 24611684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 42197651 - 42197790
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | |||||||||||||||||||||  ||||||||||  ||| |||||  |||||| || || |||||||||||||| || |||||    
T  42197651 atttcgtcgtctctgaatgactctgtttgttttgatttcc-gtctttgtgcggtgtatttttattttcccgtcttagtgcggtgtttatttgattcaggt 42197749  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || |||||||||||| |||| ||| |||||    
T  42197750 tgaaagattatctttgagcaagtgcagatccgatcgatgac 42197790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 55600561 - 55600422
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||||| ||| ||| |||||||||||||||||  || ||||||| ||||||||| ||||| |||| || | |||||||||||| || | | |    
T  55600561 attttgtcgtctctacacaactttgtttgttttgatttctcatcgttgtgcagtgtgttttttatttctcatcttagtacggtgtttatttgattccgct 55600462  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||||| |||||||| ||| |||||||||||||    
T  55600461 tgaaagattagctttgagcaagcgcagatccaatcaatga 55600422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 57 - 273
Target Start/End: Original strand, 39523433 - 39523647
Alignment:
Q  57 aattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactct 156  Q
    |||||||||||||| | | ||||||||||||||| |||| |||||||||| || ||||||||||||          |||||||| |||||| || | |||    
T  39523433 aattgtttttccttttatcctaattgaataagtgatttc-acatgttttctgttttctttcgtttgtttttatg--atttcgtcatctctgaacaaatct 39523529  T
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattag-ctctgagcaagt 255  Q
     |||||||||||||   ||||||||||  ||||||||| ||||| | || || |||||||||||||| || ||||||||||||||||  | |||||||||    
T  39523530 atttgttttgattttccgtctttgtgcggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagt 39523629  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  39523630 gcagatccgatcaatgac 39523647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 39837591 - 39837832
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttc-taattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnn 128  Q
    ||||||||||||||| |||||| || || || ||||||| | || || |||||||||||||| |||| |||| ||||| || ||||||||||||          
T  39837591 aattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttt 39837689  T
Q  129 nnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcc 228  Q
        |||||||| ||| || |||||| |||||||||||||||   ||||||||||  ||||| ||| ||||||| || || |||||||||||||| || |    
T  39837690 tg--atttcgtcatctttgaacgactttgtttgttttgattttccgtctttgtgcggtgtgtgttttatttcccgtcttagtgcggtgtttatttgattc 39837787  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||| ||| ||| |||||||||||| |||| |||||||||    
T  39837788 aggttgaaatatttgctttgagcaagtgcagatccgatcaatgac 39837832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 133 - 272
Target Start/End: Original strand, 2447897 - 2448036
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| |||||| || |||||||||||||||||||||||  || |||||||  ||||||||| || |||| || || |||||||||||||| ||  | ||    
T  2447897 atttcttcgtctttgaacgactctgtttgttttgatttcccgtttttgtgcggtgtgttttttatatcccgtcttagtgcggtgtttatttgatttatgt 2447996  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    |||||||||| || |||||||||||| || ||||||||||    
T  2447997 tgaaagattaactttgagcaagtgcagattcaatcaatga 2448036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 24100148 - 24100377
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttc-cacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtc 140  Q
    ||||| ||||||  ||||||||||||||||| |  |||||||||||||| |||| || || || || || ||||||||||||          ||||||||    
T  24100148 aaaattacccatccgaattgtttttccttctatcgtaattgaataagtgatttcacatattttctctgttttctttcgtttgtttttgca--atttcgtc 24100245  T
Q  141 gtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagat 240  Q
    |||| || ||||||||||||||||| |||||| ||||||||    ||||||||| ||||  | || || || ||||||||||| || |||||||||||||    
T  24100246 gtctgtgaacgactctgtttgttttaatttctcgtctttgtatggtgtgttttt-atttttcgtcttagtgtggtgtttatttgattcaggttgaaagat 24100344  T
Q  241 tagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| |||||||||| | |||| |||||||||    
T  24100345 tagctttgagcaagtgtagatccgatcaatgac 24100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 263
Target Start/End: Complemental strand, 8517545 - 8517350
Alignment:
Q  65 ttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgttt 164  Q
    |||||||| ||||||||||||||||| |||  |||| ||||| || ||||||||||||          |||||| |||||||| |||||| |||||||||    
T  8517545 ttccttctattctaattgaataagtgatttt-acatattttctgttttctttcgtttgtttttgtg--atttcgccgtctctgaacgactttgtttgttt 8517449  T
Q  165 tgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    |||||||| |||||| ||   ||||| ||| ||||||| || || || ||||||||||| ||  ||||||||||||||| | |||||||||||| ||||    
T  8517448 tgatttctcgtctttatgaggtgtgtgttttatttcccgtcttagtgtggtgtttatttgatttaggttgaaagattagttttgagcaagtgcagatcc 8517350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 277
Target Start/End: Complemental strand, 56236823 - 56236702
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    |||||||||||||||   ||| ||||||  ||||||||||||||||| || |||| |||| ||||||| || || |||||||||||| || ||||||||     
T  56236823 tgtttgttttgattttccgtcgttgtgcggtgtgtttttgatttcccgtcttaatacggtatttatttgattcaagttgaaagattaactttgagcaagc 56236724  T
Q  256 gcaaatccaatcaatgactttg 277  Q
    ||| |||| |||||||||||||    
T  56236723 gcagatccgatcaatgactttg 56236702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 278
Target Start/End: Original strand, 27090755 - 27090965
Alignment:
Q  64 tttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgtt 163  Q
    ||||||||| | ||||| ||||||||| ||||||| | |||||| | ||||||||||||          ||||||| |||||||||||||| ||||||||    
T  27090755 tttccttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttgttttgta---atttcgttgtctctgcacgactatgtttgtt 27090851  T
Q  164 ttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    |||||||   |||||||||   ||||||||| ||||    || || |||||||||||| | || ||||||||||||||| || |||||||||| | ||||    
T  27090852 ttgattttccgtctttgtgtggtgtgttttt-attttatgtcttagtgcggtgtttatcttattcaggttgaaagattaactttgagcaagtgtagatcc 27090950  T
Q  264 aatcaatgactttga 278  Q
     |||||||| |||||    
T  27090951 gatcaatgattttga 27090965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 133 - 242
Target Start/End: Complemental strand, 40198569 - 40198460
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| ||||||| ||||||||||||||||||   |||||||||  |||  |||||||||| | || || || ||||||||||| || |||||    
T  40198569 atttcgtcgtctttgcacgattctgtttgttttgatttcccatctttgtgcgttgtcattttgatttctcgtcttagtgtggtgtttatttgattcaggt 40198470  T
Q  233 tgaaagatta 242  Q
    ||||||||||    
T  40198469 tgaaagatta 40198460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 273
Target Start/End: Original strand, 53647770 - 53647869
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||  ||||||||| |||| || || || |||||||||||||| || |||||||||| |||| || |||||||||||| |||| |||||||||    
T  53647770 gtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttatttgattcaggttgaaaaattaactttgagcaagtgcagatccgatcaatgac 53647869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 273
Target Start/End: Original strand, 31522066 - 31522183
Alignment:
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttg-atttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||   ||||||||||  |||||||||  ||||| | || || ||| |||||||||| || |||||||||||||||| | |||||||||    
T  31522066 gtttgttttgattttccgtctttgtgcggtgtgtttttttatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattagttttgagcaagt 31522165  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  31522166 gcagatccgatcaatgac 31522183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 192 - 273
Target Start/End: Complemental strand, 32616824 - 32616743
Alignment:
Q  192 tttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||| || || |||||||||||||| || || ||||||||||||||| |||||||||||| |||  |||||||||    
T  32616824 tttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagattagctttgagcaagtgcagatctgatcaatgac 32616743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 276
Target Start/End: Original strand, 24789302 - 24789429
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctct 247  Q
    ||||||| ||||| |||||| |||  ||||||||||  || ||||| |||||| | || || ||| |||||||||| || |||||||||||||||||| |    
T  24789302 cacgactttgtttattttgaattcccgtctttgtgcggtgagtttt-gatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattagcttt 24789400  T
Q  248 gagcaagtgcaaatccaatcaatgacttt 276  Q
    || ||| |||| || ||| ||||||||||    
T  24789401 gatcaaatgcagattcaaccaatgacttt 24789429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 276
Target Start/End: Complemental strand, 24818957 - 24818830
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctct 247  Q
    ||||||| ||||| |||||| |||  ||||||||||  || ||||| |||||| | || || ||| |||||||||| || |||||||||||||||||| |    
T  24818957 cacgactttgtttattttgaattcccgtctttgtgcggtgagtttt-gatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattagcttt 24818859  T
Q  248 gagcaagtgcaaatccaatcaatgacttt 276  Q
    || ||| |||| || ||| ||||||||||    
T  24818858 gatcaaatgcagattcaaccaatgacttt 24818830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 278
Target Start/End: Original strand, 7454749 - 7454868
Alignment:
Q  159 ttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||| | ||||||||||| ||||||||| |||| || || || ||| ||||||||||  |  ||||| ||| ||||||| | | ||||||||    
T  7454749 ttgttttgatttttcgtctttgtgcagtgtgttttttattttccttcttagtgcagtgtttatttgttttaggttaaaaaattagctttaaacaagtgca 7454848  T
Q  259 aatccaatcaatgactttga 278  Q
     ||  |||||||||||||||    
T  7454849 gattgaatcaatgactttga 7454868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 272
Target Start/End: Original strand, 3159152 - 3159230
Alignment:
Q  194 tgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||| || || |||| ||||||||| |  ||||||||||| |||||| |||||||||||| |||| ||||||||    
T  3159152 tgatttcccgtcttagtgcgatgtttatttgaatcaggttgaaaggttagctttgagcaagtgcatatccgatcaatga 3159230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 274
Target Start/End: Complemental strand, 13169450 - 13169324
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctct 247  Q
    ||||||| ||||||||||||||||| |||| ||||    |||||||| |||||||  | || |   |||||||||| || ||| |||||||||||| | |    
T  13169450 cacgactttgtttgttttgatttctcgtctatgtgattcgtgttttttatttcccgacttacttttgtgtttatttgattcagattgaaagattagtttt 13169351  T
Q  248 gagcaagtgcaaatccaatcaatgact 274  Q
    || ||||||||||| ||||||| ||||    
T  13169350 gatcaagtgcaaattcaatcaacgact 13169324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 12754261 - 12754385
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| || ||| ||||| ||| |||||||||||||||| ||| ||||||| |||  ||||| ||| ||| || ||||| ||||||||||| || || ||    
T  12754261 atttcatcatctttgcaccactttgtttgttttgatttcctgtatttgtgcgatgcattttt-attacccgtcttaatgtggtgtttatttgattcaagt 12754359  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||| |||| || ||| ||||||||    
T  12754360 tgaaacattaactttgaccaagtgca 12754385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 22621610 - 22621673
Alignment:
Q  215 tgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||||||| || |||||||||||||||| | | | |||||||||||| |||||| ||||||||    
T  22621610 tgtttatttgattcaggttgaaagattagtttttaacaagtgcaaatctaatcaaagactttga 22621673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 29235390 - 29235299
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    ||||||||| |||||||| || |   ||||||||||||||| | || ||||||| ||||| ||| ||||| |||| |||||||||| |||||    
T  29235390 aattttgactcaaaatcaaccctcctaattgtttttccttcatgtccaattgaacaagtgattttcacatatttttagtcttcttttgtttg 29235299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 273
Target Start/End: Original strand, 43278088 - 43278171
Alignment:
Q  190 tttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||| || || || |||||||||||||| || ||||||| ||||||| || |||||||||| | |||| ||| |||||    
T  43278088 tttttgattttccgtcttagtgcggtgtttatttgattcaggttggaagattaactttgagcaagtgtatatccgatccatgac 43278171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 56171999 - 56172050
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatta 242  Q
    ||||||||| ||||| || |||||||||||||||||  ||||||||||||||    
T  56171999 ttttgattttccatcttagtgcggtgtttatttaattaaggttgaaagatta 56172050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 258
Target Start/End: Complemental strand, 6082404 - 6082323
Alignment:
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    ||||||| |||||||| |||||||  ||| || |  | ||||||||| ||  ||||||||||||||||| ||||||||||||    
T  6082404 tttgtgcgatgtgtttctgatttcttatcttagtatgatgtttatttgatttaggttgaaagattagctttgagcaagtgca 6082323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 31521991 - 31522044
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttc 95  Q
    |||||||||| |  ||||||||||||||||| | ||||||||||||||| ||||    
T  31521991 aaaatcacccctccgaattgtttttccttctatcctaattgaataagtgatttc 31522044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 39797863 - 39797955
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttcctt-cttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||||| ||||| | || ||||||||||||||| ||  |||| || || |||||||| ||| || || |||||| ||||||||||||||    
T  39797863 aattttgacctaaaatgatccctttgaattgtttttctttatttttttagttaaataagtgattttcatatattttcaatcttctttcgtttg 39797955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 31407780 - 31407640
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||||||  || || |||||||||||||| || |||||    
T  31407780 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttcctgtcttagtgcggtgtttatttgattcaggt 31407681  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  31407680 tgaaagattagctttgagcaagtgcagatccgatcaatgac 31407640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 2234590 - 2234365
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| || ||||||||||||||||| | ||| ||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  2234590 aaaatcaccccttcgaattgtttttccttctatcctagttgaataagtgatttc-acatattttttgttttctttcgtttgtttttgtg--atttcgtcg 2234494  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||||||||||||||||||   |||||||||  |||||||||||||| || || || |||||||||||||| || |||||||||| |||    
T  2234493 tctctgaacgactctgtttgttttgatttcccatctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaatatt 2234394  T
Q  242 agctctgagcaagtgcaaatccaatcaat 270  Q
    |||| |||||||||||| |||| ||||||    
T  2234393 agctttgagcaagtgcagatccgatcaat 2234365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 12329635 - 12329864
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||  || ||||||||||||||| | | ||||||||||||||| |||| |||| ||||| || |||||||||||           |||||||||    
T  12329635 aaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgttt-tgtttttgtgatttcgtcg 12329732  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||| ||||||||||||||||  ||||||||||  ||||||||| ||||||| || ||||||||||||||||| ||  ||||||||| |||    
T  12329733 tctctgaacgactatgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttaatgcggtgtttatttgatttaggttgaaaaatt 12329832  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||||||||||| |||| |||||||||    
T  12329833 agctttgagcaagtgcagatccgatcaatgac 12329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 4757262 - 4757402
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||  |||| |||||||||||  ||||||||||||||||| || || |||| ||||||||| || |||||    
T  4757262 atttcgtcgtctctgaacgactctgtttgttttattttcctgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcaggt 4757361  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  4757362 tgaaagattagctttgagcaagtgcagatccgatcaatgac 4757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 7579887 - 7579747
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  7579887 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcgttgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 7579788  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| || ||||||    
T  7579787 tgaaagattagctttgagcaagtgcagatccgattaatgac 7579747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 24791300 - 24791060
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||| ||||  ||||||||||||||| | | |||||| |||||||| |||  |||| ||||| || ||||||||||||           
T  24791300 aattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgattta-acatattttctgttttctttcgtttgtttttgt 24791202  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||| ||||||| || || |  ||||||||||| |  ||    
T  24791201 g--atttcgtcgtctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgtttttaatttcccgtcttagtttggtgtttatttgaatca 24791104  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| | ||||||||||||||||| |||||||||    
T  24791103 ggttgaaagattagttttgagcaagtgcaaatccgatcaatgac 24791060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 32778972 - 32778846
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgattt-cccatcataatgcggtgtttatttaatccaggttgaaagattagctctga 249  Q
    ||||||||||||||||||||   |||||||||| ||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||| || |||    
T  32778972 gactctgtttgttttgattttccgtctttgtgcgatgtgtttttgattttcccatcttaatgcggtgtttatttgattcaggttgaaagattaactttga 32778873  T
Q  250 gcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||| |||| ||||||||||||    
T  32778872 gcaagtgcagatccgatcaatgacttt 32778846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 271
Target Start/End: Original strand, 41361729 - 41361967
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || ||||||||||||||    |||||||||||||| |||| |||| ||||| || ||||||||||||           
T  41361729 aattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 41361827  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||| |||||||||  |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| |  || |||||||||||||| || ||    
T  41361828 g--atttggtcgtctctaaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgttttagtgcggtgtttatttgattca 41361925  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatg 271  Q
    |||||||||||||||| |||||||||||| |||| |||||||    
T  41361926 ggttgaaagattagctttgagcaagtgcagatccgatcaatg 41361967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 9501598 - 9501823
Alignment:
Q  42 aaaatcacccatttgaattgttttt-ccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtc 140  Q
    |||||||||||| |||||||||||| |||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||          ||||||||    
T  9501598 aaaatcacccatctgaattgttttttccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtc 9501694  T
Q  141 gtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagat 240  Q
    ||||||| |||||||||||    ||||||||  |||||||| |  | ||||||| ||||||| || |  |||||||||||||| || |||||||||||||    
T  9501695 gtctctgaacgactctgtt----ttgatttcccgtctttgtacggtttgttttttatttcccgtctttgtgcggtgtttatttgattcaggttgaaagat 9501790  T
Q  241 tagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||||||||||||| |||||||||    
T  9501791 tagctttgagcaagtgcaaatccgatcaatgac 9501823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 270
Target Start/End: Complemental strand, 10338942 - 10338717
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  ||||||||||||||| | | ||||||||||||||| |||| |||| ||||  || ||||||||||||          |||||||||    
T  10338942 aaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttc-acatattttttgttttctttcgtttgtttttgtg--atttcgtcg 10338846  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    ||| || |||||| ||||||||||||||||  |||||||||  |||||||||| ||||||| || || |||||||||||||| || || ||||||| |||    
T  10338845 tctttgaacgactttgtttgttttgatttcccgtctttgtgtgatgtgttttttatttcccgtcttagtgcggtgtttatttgattcaagttgaaaaatt 10338746  T
Q  242 agctctgagcaagtgcaaatccaatcaat 270  Q
    |||| |||||||||||| |||| ||||||    
T  10338745 agctttgagcaagtgcagatccgatcaat 10338717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 245
Target Start/End: Complemental strand, 1040013 - 1039814
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    ||||||||||||  |||||| |||||||||| |||||||| |||||||| |||| |||| ||||| |  ||||||| ||||          |||| ||||    
T  1040013 aaaatcacccatccgaattggttttccttctattctaattcaataagtgatttc-acatattttctgctttctttcatttgttttgtg---attttgtcg 1039918  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||| ||||||||||||||| ||||||||||  ||| ||||| ||||||| || || |||||||||||||| |||||||||||||||||    
T  1039917 tctctgaacgactctatttgttttgatttctcgtctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgatccaggttgaaagatt 1039818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 33 - 258
Target Start/End: Complemental strand, 30027010 - 30026789
Alignment:
Q  33 ttttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnn 131  Q
    ||||||||||||| ||||||||  || |||||||| ||||| |  |||||||||||||| |||| |||| ||||| || ||||||||||||             
T  30027010 ttttgacccaaaaatcacccatccgagttgttttttcttctatcataattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg- 30026913  T
Q  132 natttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
     ||||||||||||||| |||||||||||||||||||||||  |||||| |||  |||||||  |||||||| || || |||||||||||||| || || |    
T  30026912 -atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttctgcggtgtgttt--gatttcccgtcttagtgcggtgtttatttgattcatg 30026816  T
Q  232 ttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||| ||||||||||||    
T  30026815 ttgaaagattagctttgagcaagtgca 30026789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 28297138 - 28297000
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | ||| ||||| |||||||||| | ||||||||||  |||||||||||||||||||| || |||||||||||||| || |||||    
T  28297138 atttcgtcgtctctgaatgacactgtt-gttttgatttttcgtctttgtgcggtgtgtttttgatttcccatcttagtgcggtgtttatttgattcaggt 28297040  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||| | ||||||| |||| |||| ||||||||    
T  28297039 tgaaagattagatttgagcaactgcagatccgatcaatga 28297000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 273
Target Start/End: Original strand, 31308174 - 31308385
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgt 158  Q
    |||||||||||||| | ||||||||||||||| |||| |||| ||||  || ||||||||||||          ||||||||||||||  ||||||||||    
T  31308174 ttgtttttccttctatcctaattgaataagtgatttc-acatattttatgttttctttcgtttgtttttgtg--atttcgtcgtctctaaacgactctgt 31308270  T
Q  159 ttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    |||||||||||||  ||||||||||  ||||||||||||||||| |  || | || |||||||||||| |||||||||||| ||| | ||| ||||||||    
T  31308271 ttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgttttagtacgatgtttatttaattcaggttgaaagaatagttttgaacaagtgca 31308370  T
Q  259 aatccaatcaatgac 273  Q
     |||| |||||||||    
T  31308371 gatccgatcaatgac 31308385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 137 - 250
Target Start/End: Original strand, 22787593 - 22787706
Alignment:
Q  137 cgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaa 236  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||  |||||||||||||| || || || |||||||||||||| || |||||||||    
T  22787593 cgtcgtttctgaacgactctgtttgttttgatttcttatctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaa 22787692  T
Q  237 agattagctctgag 250  Q
    ||||||||| ||||    
T  22787693 agattagctttgag 22787706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 24699929 - 24700074
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||| ||||  | |||||||||  ||||||||| ||||||| |  || |||||||||||||| || |||||    
T  24699929 atttcgtcgtctctgaacgactctgtttgttttaattttctttctttgtgcggtgtgttttttatttcccgtgttagtgcggtgtttatttgattcaggt 24700028  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||||||||| || ||||||| |||| |||| ||||||||| ||||    
T  24700029 tgaaagattaactttgagcaaatgcagatccgatcaatgacattga 24700074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 273
Target Start/End: Complemental strand, 43937186 - 43937069
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||||||||||||||| || |||||||||    
T  43937186 tgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattaactttgagcaagt 43937087  T
Q  256 gcaaatccaatcaatgac 273  Q
    ||| |||| |||||||||    
T  43937086 gcagatccgatcaatgac 43937069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 273
Target Start/End: Original strand, 10148049 - 10148182
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaa 237  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||  |||||||  |||||| |||| || | |||||||||||| || ||||||||||    
T  10148049 gtcgtctctaaacgactctgtttgttttgatttctcgtctttgtgcggtgtgttt--gatttctcatcttagtacggtgtttatttgattcaggttgaaa 10148146  T
Q  238 gattagctctgagcaagtgcaaatccaatcaatgac 273  Q
     ||||||| |||||||||||| |||| |||||||||    
T  10148147 aattagctttgagcaagtgcagatccgatcaatgac 10148182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 14600830 - 14600590
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||| ||||  || |||||||| ||||| | |||||||||||| || |||| |||| ||||| || ||||||||||||           
T  14600830 aattttgacccaaaaatcatccatccgagttgttttttcttctatcctaattgaataactgatttc-acatattttctgttttctttcgtttgtttttgt 14600732  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || |||||||||||||||||||||||  |||||||||   | | ||||| || || | || || |||||||||||||| || ||    
T  14600731 g--atttcgtcgtctttgaacgactctgtttgttttgatttcccgtctttgtgtggtttattttttatctctcgtcttagtgcggtgtttatttgattca 14600634  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  14600633 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 14600590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 59 - 277
Target Start/End: Original strand, 2968557 - 2968773
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgt 158  Q
    ||||||||| || | |||||||| |||||||| ||| ||||| |||| ||| ||||||||||||          |||| ||||||||||||| ||| |||    
T  2968557 ttgtttttctttatattctaattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtg--attttgtcgtctctgcacaactttgt 2968654  T
Q  159 ttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||   || |||||||  ||||||||| |||| || || || |||||| ||||||| || |||||||||||||  ||| ||||||||||||    
T  2968655 ttgttttgattttccgtttttgtgcggtgtgttttttattttccgtcttagtgcggtatttatttgattcaggttgaaagatccgctttgagcaagtgca 2968754  T
Q  259 aatccaatcaatgactttg 277  Q
    ||||| |||||||||||||    
T  2968755 aatccgatcaatgactttg 2968773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 11161879 - 11162120
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| ||  | ||||||||| || | | ||||||||||||||  |||| |||| |||||||| ||||||||||||           
T  11161879 aattttgacccaaaaatcaccccttcaagttgtttttctttatatcctaattgaataagtcatttc-acatcttttcagttttctttcgtttgtttttgt 11161977  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttg-atttcccatcataatgcggtgtttatttaatcc 228  Q
       ||||||||||||| ||||||||||| || |||| |||||  ||||||||||  |||||||||  ||||||| ||  | |||||||||||||| || |    
T  11161978 g--atttcgtcgtctccgcacgactctgcttttttttatttcccgtctttgtgcggtgtgtttttttatttcccgtcgcagtgcggtgtttatttgattc 11162075  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||||||| |||||||||||| |||  |||||||||    
T  11162076 aggttgaaagattagctttgagcaagtgcatatctgatcaatgac 11162120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 273
Target Start/End: Complemental strand, 39067794 - 39067581
Alignment:
Q  57 aattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactct 156  Q
    |||||||||||||||| | |||||| |||||||| |||| |||| ||||| || ||||||||||||          |||||||||||| || |||||| |    
T  39067794 aattgtttttccttctatcctaatttaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcgtctttgaacgactat 39067698  T
Q  157 gtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    |||||||||||||||  |||||| |||  ||||||||| |||| || || || |||||||||||||  || || ||||||||||||||| ||||||||||    
T  39067697 gtttgttttgatttcccgtctttatgcgttgtgttttttattttccgtcttagtgcggtgtttattagattcatgttgaaagattagctttgagcaagtg 39067598  T
Q  257 caaatccaatcaatgac 273  Q
    || |||| ||| |||||    
T  39067597 cagatccgatcgatgac 39067581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 31202455 - 31202695
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||| ||||   ||||||||||| |||| || |||||||||||||| |||| |||| ||||| || || |||||||||           
T  31202455 aattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttc-acatattttctgttttgtttcgtttgtttttgt 31202553  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| || ||||| ||||||||||||||  |||||||| |  ||||||||||||||||  || || ||| |||||||||| || ||    
T  31202554 g--atttcgtcgtctctgaacaactctatttgttttgatttcccgtctttgtacggtgtgtttttgatttccagtcttagtgcagtgtttatttgattca 31202651  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || ||| |||||||| |||  |||||||||    
T  31202652 ggttgaaagattaactttgatcaagtgcagatctgatcaatgac 31202695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 37612750 - 37612890
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||| ||||||||| |||   |||||| ||   ||||||||||||||||| || || |||||||||||||| || || ||    
T  37612750 atttcgtcgtctctgaacgactctatttgttttgtttttccgtctttatgtggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaagt 37612849  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||| |||| |||| |||||||||    
T  37612850 tgaaagattagctttgagcaattgcagatccgatcaatgac 37612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 270
Target Start/End: Complemental strand, 37128592 - 37128382
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||||||| | ||| ||||||||||| |||| |||| ||||  || ||||||||||||          ||||||||||||||  |||||||    
T  37128592 gaattgtttttccttctatcctagttgaataagtgatttc-acatattttttgttttctttcgtttgtttttgta--atttcgtcgtctctcaacgactc 37128496  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    | |||||||||||||    |||||||||  |||||||| ||||| || || || |||||||||||||| || |||||||||||||||| | |||||||||    
T  37128495 tatttgttttgattttccatctttgtgcggtgtgtttt-gattttccgtcttagtgcggtgtttatttgattcaggttgaaagattagttttgagcaagt 37128397  T
Q  256 gcaaatccaatcaat 270  Q
    ||| |||| ||||||    
T  37128396 gcagatccgatcaat 37128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 10334272 - 10334417
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttttt-gatttcccatcataatgcggtgtttatttaatccagg 231  Q
    |||||||| ||| |||||||||||||| |||||||||| | |||| |||||  ||||||||| ||| || | || || |||||||||||||| || |||     
T  10334272 atttcgtcatctttgcacgactctgttggttttgatttttcgtctgtgtgcggtgtgttttttgatctctcgtcttagtgcggtgtttatttgattcaga 10334371  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||| ||||||| ||||||| |||| |||| |||||||||||||    
T  10334372 ttgaaatattagctttgagcaaatgcagatccgatcaatgactttg 10334417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 13576206 - 13576082
Alignment:
Q  153 ctctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagca 252  Q
    |||| ||||||||||||||  ||||||||||| ||||||||| |||| || || || |||||||||||||  || ||| ||||||||||| || ||||||    
T  13576206 ctctatttgttttgatttcccgtctttgtgcagtgtgttttttattttccgtcttagtgcggtgtttattagattcagattgaaagattaactttgagca 13576107  T
Q  253 agtgcaaatccaatcaatgactttg 277  Q
    |||||| |||| ||||| |||||||    
T  13576106 agtgcagatccgatcaacgactttg 13576082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30039463 - 30039389
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgtttt 105  Q
    ||||||||||||||||||| |||  ||||||||||||||||||||||||||||||| ||| ||||||||| ||||    
T  30039463 aattttgacccaaaatcactcatccgaattgtttttccttcttttctaattgaatatgtgatttccacatatttt 30039389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 273
Target Start/End: Complemental strand, 1810232 - 1810114
Alignment:
Q  155 ctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaag 254  Q
    |||||||||||| ||||  |||||| |||  |||||||||||| |||| || ||  ||| ||||||||| || |||||||||||||||| | ||||||||    
T  1810232 ctgtttgttttggtttcccgtctttatgcggtgtgtttttgatgtcccgtcttagcgcgatgtttatttgattcaggttgaaagattagttttgagcaag 1810133  T
Q  255 tgcaaatccaatcaatgac 273  Q
    || |||||| |||||||||    
T  1810132 tgtaaatccgatcaatgac 1810114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 3204862 - 3204723
Alignment:
Q  56 gaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactc 155  Q
    ||||||||||||| ||| |||||||| ||| |||| |||| |||| ||||| || ||||||||||||          ||||||||||||||| |||||||    
T  3204862 gaattgtttttccatctattctaatttaatgagtgatttc-acatattttctgttttctttcgtttgtttatgtg--atttcgtcgtctctgaacgactc 3204766  T
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatt 198  Q
    ||||||||||||||||| ||||| ||||| ||| | |||||||    
T  3204765 tgtttgttttgatttctcgtcttagtgcagtgtttatttgatt 3204723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 2025179 - 2025116
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| || ||| |||||||||||||| |||||||||||| |||| |||||||||    
T  2025179 tgcggtgtttatttgattcagattgaaagattagctttgagcaagtgcagatccgatcaatgac 2025116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 13570748 - 13570646
Alignment:
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccat--cataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||||||||||  ||||||||||  ||| ||||||||||||| |  | || || ||||||||||| || || ||||||||||||||| |||||||||    
T  13570748 tttgttttgatttcccgtctttgtgcggtgtatttttgatttcccgtgtcttagtgtggtgtttatttgattcaagttgaaagattagctttgagcaagt 13570649  T
Q  256 gca 258  Q
    |||    
T  13570648 gca 13570646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 276
Target Start/End: Original strand, 19489006 - 19489069
Alignment:
Q  213 ggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||||| || ||||||||||||||| || ||| ||||||||||| ||||||||||||||    
T  19489006 ggtgtttatttgattcaggttgaaagattaactttgatcaagtgcaaattcaatcaatgacttt 19489069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 183
Target Start/End: Complemental strand, 2025312 - 2025191
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgt 158  Q
    |||||||||||| | ||||||||||||||||| |||| |||||||||| || || ||||||||           ||||||||||||||| |||| |||||    
T  2025312 ttgtttttccttttattctaattgaataagtgatttc-acatgttttctgttttatttcgttt--atttttgtgatttcgtcgtctctgaacgattctgt 2025216  T
Q  159 ttgttttgatttcttgtctttgtgc 183  Q
    |||||||||||| | ||||||||||    
T  2025215 ttgttttgatttttcgtctttgtgc 2025191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 258
Target Start/End: Original strand, 4927978 - 4928192
Alignment:
Q  40 ccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgt 139  Q
    |||||||||||||| ||||||||||||||||||||| |  || ||||||   || |||||| |||| ||||||||||||||||          ||||  |    
T  4927978 ccaaaatcacccatgtgaattgtttttccttcttttttggttaaataagcaattcccacatatttttagtcttctttcgtttgtttttatgaaattt--t 4928075  T
Q  140 cgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaaga 239  Q
      ||| |||||| ||||||||||||  |||||| || |||||||  ||||||||| ||||| | |  || || ||||||| ||| || |||||||| | |    
T  4928076 tatctttgcacgtctctgtttgttt--atttctcgtatttgtgcggtgtgttttttatttctcgttctagtgtggtgtttgtttgattcaggttgagata 4928173  T
Q  240 ttagctctgagcaagtgca 258  Q
    |||||| ||||||||||||    
T  4928174 ttagctttgagcaagtgca 4928192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 272
Target Start/End: Complemental strand, 10633187 - 10633074
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||| |||| | |||| ||||||||||| ||||||   ||||| || || || |||||||||||||| || |||||||||||||||||| ||| |||||    
T  10633187 tgtttattttaagttctcgtctttgtgcattgtgtt---gattttccgtcttagtgcggtgtttattttattcaggttgaaagattagctttgatcaagt 10633091  T
Q  256 gcaaatccaatcaatga 272  Q
    | | || ||||||||||    
T  10633090 gtagattcaatcaatga 10633074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 212
Target Start/End: Complemental strand, 12832351 - 12832287
Alignment:
Q  147 gcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgc 212  Q
    ||||||||||||||||||  ||||| |||||| ||||||||| ||||||||||||| |||||||||    
T  12832351 gcacgactctgtttgttta-atttcctgtcttcgtgcaatgtatttttgatttcccttcataatgc 12832287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 15288811 - 15288754
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc 205  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||| ||||| ||||    
T  15288811 cacgactctgtttgttttgatttcctgtctttgtgcggtgtgttttttatttctcatc 15288754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 15469180 - 15469123
Alignment:
Q  148 cacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc 205  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||| ||||| ||||    
T  15469180 cacgactctgtttgttttgatttcctgtctttgtgcggtgtgttttttatttctcatc 15469123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 4429183 - 4429303
Alignment:
Q  158 tttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgc 257  Q
    |||||||||||||   ||||||||||||||| ||||| ||||| | |  || || ||||||||||| ||   ||||||||||||| || |||| ||||||    
T  4429183 tttgttttgattttccgtctttgtgcaatgtattttttatttctcgtgttactgtggtgtttatttgatttgggttgaaagattaactttgagaaagtgc 4429282  T
Q  258 aaatccaatcaatgactttga 278  Q
    | || ||||| ||||||||||    
T  4429283 atattcaatcgatgactttga 4429303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 19720159 - 19720231
Alignment:
Q  186 tgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgca 258  Q
    ||||||||| ||||| | || |||||||||  |||||| || |||||||||||||||||| ||||||||||||    
T  19720159 tgtgttttttatttctcgtcttaatgcggtaattatttgattcaggttgaaagattagctttgagcaagtgca 19720231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 97
Target Start/End: Original strand, 7281654 - 7281709
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttcca 97  Q
    ||||||||||||  |||||||||||| |||||||||| ||||||||||| ||||||    
T  7281654 aaaatcacccatccgaattgtttttctttcttttctagttgaataagtgatttcca 7281709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 6220070 - 6219984
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||| ||||| |||| | ||||| ||||||||| || ||||||||||||||||   |||||||||||| || |||||||||| ||||    
T  6220070 ttttaatttctcatctttatgcgatgtttatttcattcaggttgaaagattagtcttgagcaagtgcagattcaatcaatgattttg 6219984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 23971214 - 23971135
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttg 122  Q
    |||||||| |||  || |||||||||||||| ||||||||||||||||| ||| ||||| ||||  || ||||||||||||    
T  23971214 aaaatcactcatccgagttgtttttccttctattctaattgaataagtgattt-cacatattttatgttttctttcgtttg 23971135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 12111344 - 12111278
Alignment:
Q  173 tgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaaga 239  Q
    ||||||| |||  ||||||| ||||||||| |  ||||||||||||||||| |||| ||||||||||    
T  12111344 tgtctttctgcggtgtgtttctgatttcccgttttaatgcggtgtttatttgatcctggttgaaaga 12111278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 24210379 - 24210461
Alignment:
Q  174 gtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    ||||||||||  ||||||||| |||||   || || |||||| ||||||| || |||||||||||||||||| ||| ||||||    
T  24210379 gtctttgtgcggtgtgtttttaatttctggtcttagtgcggtatttatttgattcaggttgaaagattagctttgaacaagtg 24210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 163
Target Start/End: Complemental strand, 30039369 - 30039339
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgtt 163  Q
    |||||||||||||||||||||||||||||||    
T  30039369 atttcgtcgtctctgcacgactctgtttgtt 30039339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 32779069 - 32778992
Alignment:
Q  44 aatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgttt 121  Q
    |||||||| || || |||||||||||| | |  ||||| |||||| | ||||||||| |||||||| |||||||||||    
T  32779069 aatcaccccttcgagttgtttttccttatatcataattaaataagagatttccacatattttcagttttctttcgttt 32778992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 3204759 - 3204687
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    |||||||||| | || || ||| |||||||||| || || |||||||||||| || |||||||||||| ||||    
T  3204759 ttttgatttctcgtcttagtgcagtgtttatttgattcaagttgaaagattaactttgagcaagtgcatatcc 3204687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 23971115 - 23971075
Alignment:
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  23971115 tgaaagattagctttgagcaagtgcagatccgatcaatgac 23971075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 95
Target Start/End: Complemental strand, 28297211 - 28297175
Alignment:
Q  59 ttgtttttccttcttttctaattgaataagtgctttc 95  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  28297211 ttgtttttccttcttttctaattgaattagtgatttc 28297175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 275
Target Start/End: Complemental strand, 35779096 - 35778968
Alignment:
Q  147 gcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctc 246  Q
    |||||||| ||||| |||||||||   ||||||||||  ||| ||||| ||||  |||| || | |||||||||||| ||  ||||||||| | ||| |     
T  35779096 gcacgactttgtttattttgattttccgtctttgtgcggtgtattttttattttacatcttagttcggtgtttattttatttaggttgaaaaaatagttt 35778997  T
Q  247 tgagcaagtgcaaatccaatcaatgactt 275  Q
    ||| |||||||| || ||||||| |||||    
T  35778996 tgatcaagtgcatattcaatcaacgactt 35778968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 273
Target Start/End: Original strand, 44517157 - 44517384
Alignment:
Q  43 aaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgt 142  Q
    ||||||||| |  ||||||||||||||||| | |||||| |||||||| |||| |||| ||||| |  ||||||||||||          ||||||||||    
T  44517157 aaatcacccttccgaattgtttttccttctatcctaattcaataagtgatttc-acatattttctgctttctttcgtttgtttttgtg--atttcgtcgt 44517253  T
Q  143 ctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatta 242  Q
    ||||| |||||||||||||||||||||||   |||||||||  ||||||||||||||||| || || |||||||||||||| || |||||||||||||||    
T  44517254 ctctgaacgactctgtttgttttgatttcccttctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta 44517353  T
Q  243 gctctgagcaagtgcaaatccaatcaatgac 273  Q
     || ||||||||||||||||| |||||||||    
T  44517354 actttgagcaagtgcaaatccgatcaatgac 44517384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 273
Target Start/End: Original strand, 3232797 - 3233025
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  ||||||||||||||||| | |||||||||||| || |||| |||| ||||| || ||||||||||||          |||||||||    
T  3232797 aaaatcacccctccgaattgtttttccttctatcctaattgaataaatgatttc-acatattttctgttttctttcgtttgtttttgtg--atttcgtcg 3232893  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    | |||| ||||||||||||||||||||||| ||||||||||| |||||||||| |||| || || || |||| ||||||||| || ||||||||||||||    
T  3232894 tttctgaacgactctgtttgttttgatttcctgtctttgtgctatgtgttttttattttccgtcttagtgcgatgtttatttgattcaggttgaaagatt 3232993  T
Q  242 agctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||| |||| ||||||| |||| |||||||||    
T  3232994 agctttgagaaagtgcagatccgatcaatgac 3233025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 28678154 - 28678014
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || || |||||||||||||| || |||||    
T  28678154 atttcgtcgtatttgaacgactctgtttgttttgatttctcgtctttgtgcagtgtgtttttgatttcccgtcctagtgcggtgtttatttgattcaggt 28678055  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| ||||||| |||||||||||| |||| |||||||||    
T  28678054 tgaaaaattagctttgagcaagtgcagatccgatcaatgac 28678014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 29205282 - 29205522
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| || ||||||||||||||||| |  |||||||||||||| |||| | || ||||| || |||||| |||||           
T  29205282 aattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttc-atatattttctgttttcttttgtttgtttttgt 29205380  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||||||||||| || || |||||||||||||| || ||    
T  29205381 g--atttcgtcgtctctgaacgactctgtttgttttgatttcacgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 29205478  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||| ||| |||| |||||||||| | |||| |||||||||    
T  29205479 ggttgaatgatcagctttgagcaagtgtagatccgatcaatgac 29205522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 273
Target Start/End: Original strand, 42276356 - 42276592
Alignment:
Q  33 ttttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnn 132  Q
    ||||||| ||||||||||| |  ||||||||||| ||||| |  ||||| ||||| || |||| |||| |||||||| ||||||||||||              
T  42276356 ttttgacacaaaatcacccctccgaattgttttttcttctatcataattaaataactgatttc-acatattttcagttttctttcgtttgatttgtg--- 42276451  T
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||| ||||||||||| |||||||||||||||||||||||  |||||| | |  |||||||||||||||||||| || |||||||||||||| || |||||    
T  42276452 attacgtcgtctctgaacgactctgtttgttttgatttcccgtctttatccggtgtgtttttgatttcccatcttagtgcggtgtttatttgattcaggt 42276551  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| | |||||||||| |||| |||||||||    
T  42276552 tgaaagattagctttaagcaagtgcagatccgatcaatgac 42276592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 277
Target Start/End: Original strand, 12871618 - 12871862
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || ||||||||| || | | ||||| ||||||||| |||| |||| |||||||| ||||||||||||           
T  12871618 aattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttc-acatattttcagttttctttcgtttgtttttgt 12871716  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| ||||||||||||||||||||||||||  ||||||||||  ||||||||| ||||| |||| || |||| ||||||||| ||  |    
T  12871717 g--atttcgtcgtctttgcacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttctcatcttagtgcgttgtttatttgattta 12871814  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||||||||||| |||||||||||| || | |||||||||||||    
T  12871815 ggttgaaagattagctttgagcaagtgcagattcgatcaatgactttg 12871862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 14265381 - 14265521
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||||||||||||||||||   ||||||||||  ||||||||||||||||| || || |||| ||||||||| || |||||    
T  14265381 atttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcaggt 14265480  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||||||||||| |||| |||||||||    
T  14265481 tgaaagattagctttgagcaagtgcagatccgatcaatgac 14265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 29726620 - 29726481
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||| ||||||||| ||||||||||||| |  ||||||||||  ||||||||||||||||| || |||||||||||||| || || |||||    
T  29726620 atttcgtcgtctccgcacgactcggtttgttttgattacc-gtctttgtgcggtgtgtttttgatttcccgtcttaatgcggtgtttaattgattcaggt 29726522  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  29726521 tgaaagattagctctgagcaagtgcagatccgatcaatgac 29726481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 291
Target Start/End: Original strand, 42490902 - 42491148
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcg 141  Q
    |||||||||| |  |||||||||||| |||| |  |||||||||||||| |||| |||| | |||||| ||||||||||||          |||||||||    
T  42490902 aaaatcacccctccgaattgtttttcgttctatcttaattgaataagtgatttc-acatatcttcagttttctttcgtttgtttttgtg--atttcgtcg 42490998  T
Q  142 tctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatt 241  Q
    |||||| |||||||||||||||||||||||  ||||||||||   |||||||||||||| | || || |||||||||||||| || ||| ||||||||||    
T  42490999 tctctgtacgactctgtttgttttgatttcccgtctttgtgcggggtgtttttgatttctcgtcttagtgcggtgtttatttgattcagattgaaagatt 42491098  T
Q  242 agctctgagcaagtgcaaatccaatcaatgactttgaaaccgtcaatgtt 291  Q
    |||| |||||||||||| |||  ||||||||| ||||   ||||||||||    
T  42491099 agctttgagcaagtgcagatcagatcaatgacgttgacgtcgtcaatgtt 42491148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 7995684 - 7995444
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||  |  ||||||||||||||||| | ||||||||||||||| ||| ||||| ||||| || ||||| | |||            
T  7995684 aattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgattt-cacatattttctgttttcttcctttt--tttttt 7995588  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       || |||||||||||| | |||||||||||||||||||| | ||||||||||  ||||||||||||||||| || || || ||||||||||| || ||    
T  7995587 gtgatatcgtcgtctctgaatgactctgtttgttttgatttttcgtctttgtgcggtgtgtttttgatttcccgtcttagtgtggtgtttatttgattca 7995488  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  7995487 ggttgaaagattagctttgagcaagtgcatatccgatcaatgac 7995444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 273
Target Start/End: Complemental strand, 15391329 - 15391136
Alignment:
Q  77 taattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtc 176  Q
    |||||||||||||| |||| |||||||||| || ||||||||||||          ||||||||||||||| ||||||  |||||||||||||||  |||    
T  15391329 taattgaataagtgatttc-acatgttttctgttttctttcgtttgtttttgtg--atttcgtcgtctctggacgacttcgtttgttttgatttcccgtc 15391233  T
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||  ||||||||||||||||| || || |||||||||||||| || ||||||||||||||| || |||||||||||| |||| |||||||||    
T  15391232 tttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattatctttgagcaagtgcatatccgatcaatgac 15391136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 13488560 - 13488420
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||| |||||||| |||||||||||||||||||||||  ||||||||||| ||| ||||| ||||||| || || ||||||||||||||||| |||||    
T  13488560 atttcgccgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagtgttttttttatttcccgtcttagtgcggtgtttatttaattcaggt 13488461  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||| ||| |||| |||||||||    
T  13488460 tgaaagattagctttgaacaagagcagatccgatcaatgac 13488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 33487154 - 33486914
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| | ||||||||||| ||| ||| || || ||||  |  ||||||||||||           
T  33487154 aattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgattt-catatattttatgctttctttcgtttg--ttttt 33487058  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       |||||||||||| || |||||||||||||||||||||||| || ||||| || ||||||||||||||||| || || |||||||||||||| || ||    
T  33487057 gtgatttcgtcgtctttgaacgactctgtttgttttgatttctcgtatttgtacagtgtgtttttgatttcccgtcttagtgcggtgtttatttgattca 33486958  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||| |||| || ||||||| ||||||||| |||||||||    
T  33486957 ggttgaaaaattaactttgagcaaatgcaaatccgatcaatgac 33486914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 20411570 - 20411786
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  |||||||||||| || | ||| ||||||||||||| |||| |||| ||||| || ||||||||||||           
T  20411570 aattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgg 20411668  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||| ||||||||  |||||||||||||||||||||||| ||||||||||  |||| |||||||||||| || || |||||||||||||| || ||    
T  20411669 g--atttcatcgtctctaaacgactctgtttgttttgatttctcgtctttgtgcggtgtg-ttttgatttcccgtcttagtgcggtgtttatttgattca 20411765  T
Q  230 ggttgaaagattagctctgag 250  Q
    |||||||||||||||| ||||    
T  20411766 ggttgaaagattagctttgag 20411786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 424415 - 424175
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || |||||||||||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  424415 aattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 424317  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||| ||||||||||||||||  |||||| ||| |||||||||| |||| || || || | |||||||||||| ||| |    
T  424316 g--atttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcgatgtgttttttattttccgtcttagtacggtgtttatttgatcta 424219  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || ||  |||||||| || | |||||||||    
T  424218 ggttgaaagattaactttgcacaagtgcagattcgatcaatgac 424175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 17347694 - 17347834
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||||||||||||||| ||||||||||||||  || | ||||| |||||||||||||||||| || || ||| |||||||||| ||  ||||    
T  17347694 atttcgtcgtctctgcacgactctctttgttttgatttcccgtatgtgtgcgatgtgtttttgatttcccgtcttagtgcagtgtttatttgattaaggt 17347793  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||| ||||||| || | |||||||||    
T  17347794 tgaaagattagctttgagtaagtgcagattcgatcaatgac 17347834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 45750575 - 45750715
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| ||||||||||||||| | ||||||||||  ||| ||||| ||||||| || || |||||||||||||| || |||||    
T  45750575 atttcgtcgtctttgaacgactttgtttgttttgatttatcgtctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggt 45750674  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| | |||||||||| |||| |||||||||    
T  45750675 tgaaagattagcttttagcaagtgcagatccgatcaatgac 45750715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 10627097 - 10627236
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | |||||||||||||||  ||||  ||||||||||  ||||||||| |||| || ||||| |||||||||||||| || |||||    
T  10627097 atttcgtcgtctctgaatgactctgtttgttttagtttcccgtctttgtgcggtgtgttttttattttccgtcatagtgcggtgtttatttgattcaggt 10627196  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    || |||||||||| |||||||||||| |||| |||||||||    
T  10627197 tg-aagattagctttgagcaagtgcagatccgatcaatgac 10627236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 277
Target Start/End: Complemental strand, 25033112 - 25032968
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| | | ||||||||||| ||| |||||||||||  |||||||| | |||| ||||| ||||||||| ||||| ||||||||||| || |||||    
T  25033112 atttcgtcatgtttgcacgactctatttattttgatttctcatctttgtgtagtgtggttttgttttcccatcttaatgtggtgtttatttgattcaggt 25033013  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||  |||||| || ||||||||||||||| |||||||||||||||    
T  25033012 tgtgagattaactttgagcaagtgcaaattcaatcaatgactttg 25032968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 37822469 - 37822230
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| | |||| | |||||||||||||||||| | ||||||||||||||| |||| |||| |||||  | ||||||| ||||           
T  37822469 aattttgacccaaaaattacccttctgaattgtttttccttctatcctaattgaataagtgatttc-acatattttctattttctttcatttgtttttgt 37822371  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||| ||||||||||| |||| ||||||| |||  | ||||||| ||||||| || || ||| || ||||||| || ||    
T  37822370 g--atttcgtcgtctctgaacgactttgtttgttttgttttcctgtctttatgcggtatgttttttatttcccgtcttagtgcagtatttatttgattca 37822273  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || |||||||||||| |||| |||||||||    
T  37822272 ggttgaaagatta-ctttgagcaagtgcagatccgatcaatgac 37822230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 4882383 - 4882244
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||  ||||||  |||||||||||||||  ||||||||||  |||||||||||||| |  || || |||||||||||||| || || ||    
T  4882383 atttcgtcgtctcttaacgacttcgtttgttttgatttcccgtctttgtgcggtgtgtttttgattttctgtcttagtgcggtgtttatttgattcaagt 4882284  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||||||||||| |||||||||||| |||| ||||||||    
T  4882283 tgaaagattagctttgagcaagtgcagatccgatcaatga 4882244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 278
Target Start/End: Original strand, 47551194 - 47551337
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||||||||||||  |||||||||||| | | | ||||||  ||||||||| ||||||| ||  | ||| ||||||| || ||  ||||    
T  47551194 atttcgtcgtctctgcacgactct--ttgttttgatttttcggccttgtgcggtgtgttttttatttcccgtctcagtgctgtgtttaattgatttaggt 47551291  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||    
T  47551292 tgaaagattagctttgagcaagtgcagatccaatcaatgactttga 47551337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 15791299 - 15791159
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| ||||||||| |||||||||||||||||||||||  |||||||||   ||||||||| ||||| || | || |||||||||||||| || |||||    
T  15791299 atttcatcgtctctgaacgactctgtttgttttgatttcgagtctttgtgtggtgtgttttttatttctcaccttagtgcggtgtttatttgattcaggt 15791200  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| |||  || ||||||||  |||||||||    
T  15791199 tgaaagattagctttgaagaaatgcaaatcttatcaatgac 15791159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 277
Target Start/End: Original strand, 32878805 - 32878949
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||  ||||||||| | ||||||||||||||  ||  |||| |  |||||||||||||| || || || | |||||||||||| || |||||    
T  32878805 atttcgtcgtcattgcacgactttatttgttttgatttcccgttcttgtacggtgtgtttttgattttccgtcttagtacggtgtttatttgattcaggt 32878904  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||    
T  32878905 tgaaagattagctttgagcaagtgcagatccgatcaatgactttg 32878949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 222
Target Start/End: Complemental strand, 33125929 - 33125740
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnn 130  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||| |||||||||  ||| ||| ||||||  ||||            
T  33125929 aattttgacccaaaatcactcatctaaattgtttttccttcttttataattgaataagtgatttccacataattttagtattcttttctttg--tttttg 33125832  T
Q  131 nnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatt 222  Q
      ||||||| |||||||||| |||||||||||||||||||  |  |||||| | |||||||||| ||||| | || ||||| ||||||||||    
T  33125831 tgatttcgttgtctctgcacaactctgtttgttttgattttgtacctttgtacgatgtgttttttatttctcgtcttaatgtggtgtttatt 33125740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 29069866 - 29069720
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataat-gcggtgtttatttaatccagg 231  Q
    |||||||||||| | |||||||||||||||||||||||  ||||||||||| |||||||||||||||| | |  || | | ||||||||||| || |||     
T  29069866 atttcgtcgtctttacacgactctgtttgttttgattttatgtctttgtgcgatgtgtttttgatttctcgttttagtgggggtgtttatttgattcaga 29069767  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    |||||||||||  | ||| |||||||| || ||||||||||||||||    
T  29069766 ttgaaagattaattttgatcaagtgcatattcaatcaatgactttga 29069720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 276
Target Start/End: Complemental strand, 28399335 - 28399210
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    |||||||||| ||||||||||  | ||||||||  ||||||||| ||||||  || ||||||||| ||||||| || || ||||||| ||||||| ||||    
T  28399335 gactctgtttattttgatttcccgactttgtgcggtgtgttttttatttcctgtcttaatgcggtatttatttgattcatgttgaaatattagctttgag 28399236  T
Q  251 caagtgcaaatccaatcaatgacttt 276  Q
    |||||||| |||||||||||||||||    
T  28399235 caagtgcagatccaatcaatgacttt 28399210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 277
Target Start/End: Complemental strand, 9298423 - 9298296
Alignment:
Q  152 actctgtttgttttgatttcttgtctttgtgcaatgt--gtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctga 249  Q
    |||||| |||||||||||||  ||||||| || | ||  |||||| |||||||||| || |||||||||||||| || ||||||||||||||| || |||    
T  9298423 actctgcttgttttgatttcccgtctttgagctaggtttgttttttatttcccatcttagtgcggtgtttatttgattcaggttgaaagattaactttga 9298324  T
Q  250 gcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||| |||| |||||||||||||    
T  9298323 gcaagtgcagatccgatcaatgactttg 9298296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 149 - 273
Target Start/End: Original strand, 18343726 - 18343849
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    ||||||||||||||| |||||||| ||||||||||  | ||||||||||||||| || || ||||||||||| || || |||||||||||||||||| ||    
T  18343726 acgactctgtttgttctgatttctcgtctttgtgcggtatgtttttgatttcccgtcttagtgcggtgttta-ttgattcaggttgaaagattagctttg 18343824  T
Q  249 agcaagtgcaaatccaatcaatgac 273  Q
    | |||| ||| |||| |||||||||    
T  18343825 aacaagagcagatccgatcaatgac 18343849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 33939037 - 33938897
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||| |||||| ||||||||||||||||||||||   ||||||||||   |||||||| |||| || || || ||||||| ||||||  |  ||||    
T  33939037 atttcgtcatctctgaacgactctgtttgttttgattttccgtctttgtgcggcgtgttttttattttccgtcttagtgcggtgcttatttggtttaggt 33938938  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||||| || ||||||||||||||    
T  33938937 tgaaagattagctttgagcaagtacagatccaatcaatgac 33938897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 275
Target Start/End: Complemental strand, 24114703 - 24114561
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||| |||| | ||||||| ||||||||||||||||| ||||||||||  ||||||||| ||||   ||| ||||||| ||||||||| || || ||    
T  24114703 atttcgttgtctttacacgactttgtttgttttgatttctcgtctttgtgcggtgtgtttttaatttaatatcttaatgcgatgtttatttgattcaagt 24114604  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactt 275  Q
    |||||||||||   | |||||||||| || |||||||||||||    
T  24114603 tgaaagattagtgtttagcaagtgcagattcaatcaatgactt 24114561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 254
Target Start/End: Original strand, 27534796 - 27534915
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| ||||||  |||||||||||||||  ||||||||||  ||||||||||||||||| || || || | ||||||||| || |||||    
T  27534796 atttcgtcgtctctgaacgact--gtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgtgatgtttatttgattcaggt 27534893  T
Q  233 tgaaagattagctctgagcaag 254  Q
    ||||||||||||| ||| ||||    
T  27534894 tgaaagattagctttgaacaag 27534915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 277
Target Start/End: Original strand, 13999079 - 13999207
Alignment:
Q  149 acgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctg 248  Q
    |||||||||||||||||||||| | |||||||||  |||||||||| ||||  | || || | || ||||||||| || ||||||| ||||||| || ||    
T  13999079 acgactctgtttgttttgatttatcgtctttgtgtgatgtgttttttatttttcgtcttagtacgatgtttatttgattcaggttgtaagattaactttg 13999178  T
Q  249 agcaagtgcaaatccaatcaatgactttg 277  Q
    ||||| |||| || |||||||||||||||    
T  13999179 agcaaatgcagattcaatcaatgactttg 13999207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 25689862 - 25689723
Alignment:
Q  138 gtcgtctctgcacgactctgtttgttttgatttctt-gtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccaggttga 235  Q
    ||||||| |||| |||||||||||||||||||| || ||||||||||  ||||||| ||||||| || |  ||||| ||||||||||| || ||||||||    
T  25689862 gtcgtctttgcatgactctgtttgttttgattttttcgtctttgtgcgttgtgtttgttgattttccgttttaatgtggtgtttattttattcaggttga 25689763  T
Q  236 aagattagctctgagcaagtgcaaatccaatcaatgactt 275  Q
     ||||||||| || | ||| ||| || |||||||||||||    
T  25689762 tagattagctttgggaaagcgcatattcaatcaatgactt 25689723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 276
Target Start/End: Complemental strand, 26098014 - 26097886
Alignment:
Q  146 tgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagct 245  Q
    ||||||||| || |||||||||||||||||||||||| |  |||||||||||||  | || || | |||| ||||||| || |||||||||| |||||||    
T  26098014 tgcacgactttgattgttttgatttcttgtctttgtgta--gtgtttttgatttttcgtcttagtacggtatttatttgattcaggttgaaaaattagct 26097917  T
Q  246 ctgagcaagtgcaaatccaatcaatgacttt 276  Q
     |||||||||||| || | || |||||||||    
T  26097916 ttgagcaagtgcagattccattaatgacttt 26097886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 152 - 273
Target Start/End: Complemental strand, 45193631 - 45193512
Alignment:
Q  152 actctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagc 251  Q
    ||||| ||||||||||||||| |||||||| |  |||||||  |||||||| || || | |||||||||||| |  |||||||||||||||||| |||||    
T  45193631 actctatttgttttgatttctcgtctttgtacggtgtgttt--gatttcccgtcttagtacggtgtttatttgaatcaggttgaaagattagctttgagc 45193534  T
Q  252 aagtgcaaatccaatcaatgac 273  Q
    ||||||  |||| |||||||||    
T  45193533 aagtgctgatccgatcaatgac 45193512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 29938358 - 29938478
Alignment:
Q  156 tgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagt 255  Q
    ||||||| |||||||   |||||||| | |||||||||||||||| | || || |||||||||||||| ||  | ||||||||| ||||| ||| |||||    
T  29938358 tgtttgtgttgattttccgtctttgttcgatgtgtttttgatttctcgtcctagtgcggtgtttatttgatttatgttgaaagaatagct-tgatcaagt 29938456  T
Q  256 gcaaatccaatcaatgactttg 277  Q
    ||| ||||||||||||||||||    
T  29938457 gcagatccaatcaatgactttg 29938478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 273
Target Start/End: Complemental strand, 4871013 - 4870917
Alignment:
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||| || ||||||||| ||||| |||| || |||||||||||||| || ||| |||||| ||||||| |||||||||||| |||| |||||||||    
T  4871013 tttgtacagtgtgttttttatttctcatcttagtgcggtgtttatttgattcagattgaaaaattagctttgagcaagtgcagatccgatcaatgac 4870917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 273
Target Start/End: Original strand, 13869674 - 13869874
Alignment:
Q  69 ttcttttctaattgaataagtgctttccacatgttttcagtc-ttctttcgtttgnnnnnnnnnnatttcgtcgtctctgcacgactctgtttgttttga 167  Q
    |||||||||||||||||||||| |||||||||||||| |||| || |||||||||          ||||  | || ||||||||||||| ||||||||||    
T  13869674 ttcttttctaattgaataagtgatttccacatgtttttagtctttttttcgtttg--ttattgtgattttattgtatctgcacgactctatttgttttga 13869771  T
Q  168 tttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatc 267  Q
    |||  | |||||||| |   ||||||| |||| || || || |||||||||||||| ||  ||||||||||||||| | ||| |||||| | ||||||||    
T  13869772 tttactatctttgtgta--ttgttttttattt-ccgtcttagtgcggtgtttatttgatttaggttgaaagattagttttgaacaagtgtagatccaatc 13869868  T
Q  268 aatgac 273  Q
    ||||||    
T  13869869 aatgac 13869874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 51418158 - 51418221
Alignment:
Q  210 tgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||| || ||||| |||||||||||| ||||||||||||||||| |||||||||    
T  51418158 tgcggtgtttatttgattcaggtggaaagattagctttgagcaagtgcaaatccgatcaatgac 51418221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 175 - 256
Target Start/End: Original strand, 32301477 - 32301558
Alignment:
Q  175 tctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtg 256  Q
    |||||||||  ||||||||| ||||| | || ||||||||||||||||| || |||||||||||||||||| ||| ||||||    
T  32301477 tctttgtgcggtgtgttttttatttctcgtcttaatgcggtgtttatttgattcaggttgaaagattagctttgatcaagtg 32301558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 32784234 - 32784313
Alignment:
Q  191 ttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaat 270  Q
    ||||||||| || || || |||||||||||||| || |||| ||||||||||||| ||||||||||||||| | ||||||    
T  32784234 ttttgattttccgtcttagtgcggtgtttatttgattcaggctgaaagattagctttgagcaagtgcaaattcgatcaat 32784313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 29551760 - 29551630
Alignment:
Q  147 gcacgactctgtttgttttgatttcttgtctttgtgcaatgtgttt-ttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagct 245  Q
    |||||||| ||||| ||||||||| | ||||||| || |||||||| || ||||||| || || || ||||||||||| ||  ||||||||| ||||| |    
T  29551760 gcacgactttgtttattttgatttttcgtctttgagcgatgtgtttctttatttcccttcttagtgtggtgtttatttgattaaggttgaaatattagtt 29551661  T
Q  246 ctgagcaagtgcaaatccaatcaatgacttt 276  Q
     ||| |||||||| || ||||||| ||||||    
T  29551660 ttgatcaagtgcatattcaatcaaagacttt 29551630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 270
Target Start/End: Original strand, 8737448 - 8737584
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||| || ||| ||| ||| ||| |||||||||||||   ||||||||||||||| ||  |||| ||   || || ||| |||||||||| || |||||    
T  8737448 atttcatcatctttgcgcgattctatttgttttgatttaccgtctttgtgcaatgt-ttgctgatatctagtcttagtgcagtgtttatttgattcaggt 8737546  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaat 270  Q
    ||||||||||||| |||| ||||||| |||||||||||    
T  8737547 tgaaagattagctttgagtaagtgcagatccaatcaat 8737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 276
Target Start/End: Complemental strand, 2513627 - 2513481
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtg---tttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
    |||||||||||| | ||||||||| |||||||||||||   ||||||||||  ||||   ||||| |||||   || || |||||||||| ||| || ||    
T  2513627 atttcgtcgtcttttcacgactctatttgttttgattttccgtctttgtgcggtgtgtttttttttatttcatgtcttagtgcggtgtttgtttgattca 2513528  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    |  |||||||||| || |||||  ||||| |||||||||||||||||    
T  2513527 gactgaaagattaactttgagcgggtgcatatccaatcaatgacttt 2513481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 38783208 - 38783303
Alignment:
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    |||||||| ||||||||| ||||| | || || || | ||||||||| |||||| ||||||||||| || ||| |||||||| || ||||||||||    
T  38783208 tttgtgcagtgtgttttttatttctcgtcttagtgtgatgtttatttgatccagtttgaaagattaactttgatcaagtgcagatgcaatcaatga 38783303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 45425496 - 45425359
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgt-ttttgatttcccatcataatgcggtgtttatttaatccagg 231  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||| |  |||||| |||| |||  ||| | || |||||||||||||| || || |    
T  45425496 atttcgtcgtcttagcacgactctgtt--ttttgatttcttgtctttgagatatgtgtatttttatt--ccagcttagtgcggtgtttattttattcatg 45425401  T
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||   ||| ||| |||| ||| ||||||||||    
T  45425400 ttgaaagattagtcttgatcaattgcatatcgaatcaatgac 45425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 276
Target Start/End: Complemental strand, 50107884 - 50107794
Alignment:
Q  188 tgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagatta--gctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||||||||||||| || || |||||||||||||| ||  | ||||||| ||||  ||| ||| ||||||||||| ||||||||||||||    
T  50107884 tgtttttgatttcccgtcttagtgcggtgtttatttgatttatgttgaaaaattatagctttgatcaagtgcaaattcaatcaatgacttt 50107794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 277
Target Start/End: Complemental strand, 40862840 - 40862699
Alignment:
Q  135 ttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttg 234  Q
    |||||| ||| |||| |||||| ||||||||||||| |  |||||||||  ||||||||| ||||  |||| ||  ||| ||||||||| || ||| |||    
T  40862840 ttcgtcatctttgcatgactctttttgttttgatttttcatctttgtgcg-tgtgttttttatttttcatcttagagcgatgtttatttgattcagattg 40862742  T
Q  235 aaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||| | ||| || ||| |||| |||||||||| ||||    
T  40862741 aaagattagttttgatcaggtgtaaatgcaatcaatgattttg 40862699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 51418110 - 51418160
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgc 183  Q
    ||||||||||||||| ||||||||||||||||||||||   ||||||||||    
T  51418110 atttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgc 51418160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 170
Target Start/End: Original strand, 32784105 - 32784242
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  ||||||||||||||||| | || |||||||||||| ||| ||||| ||||| || |||||| |||||           
T  32784105 aattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgattt-cacatattttctgttttcttttgtttg--ttttt 32784201  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgattt 170  Q
       ||||||||||||||| |||||| ||||| |||||||||    
T  32784202 gtgatttcgtcgtctctgaacgactatgtttcttttgattt 32784242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 239
Target Start/End: Complemental strand, 34335094 - 34335006
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaaga 239  Q
    ||||||||||||||| ||||||  |||||||||  ||||||||| |||| ||||| || ||   ||||||||| || ||||||||||||    
T  34335094 gactctgtttgttttaatttctcatctttgtgcgttgtgtttttcattttccatcttagtgtattgtttatttgattcaggttgaaaga 34335006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 25033208 - 25033169
Alignment:
Q  31 aattttgacccaaaatcacccatttgaattgtttttcctt 70  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  25033208 aattttgatccaaaatcacccatctgaattgtttttcctt 25033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 276
Target Start/End: Original strand, 10304728 - 10304818
Alignment:
Q  186 tgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||| ||||||||| | || || || ||||||||||| || || ||||||| ||||||| |||| ||||| | || ||||||||||||||    
T  10304728 tgtgtatttgatttctcgtcttagtgtggtgtttatttgattcaagttgaaatattagctttgagaaagtggagattcaatcaatgacttt 10304818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Complemental strand, 31427093 - 31427031
Alignment:
Q  214 gtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    |||||||||| || ||||||||||||||| || ||| ||||||||| | |||||||| |||||    
T  31427093 gtgtttatttgattcaggttgaaagattaactttgatcaagtgcaacttcaatcaataacttt 31427031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 13152636 - 13152681
Alignment:
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    ||||||||||| || |||||||||||| |||| |||||||||||||    
T  13152636 ttgaaagattaactttgagcaagtgcagatccgatcaatgactttg 13152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 277
Target Start/End: Original strand, 30678396 - 30678496
Alignment:
Q  177 tttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgacttt 276  Q
    ||||| |||| |||| ||||||| ||||| || || | |||||||| |||  ||||||||||||||| | ||| ||| || | ||||||||||||| |||    
T  30678396 tttgtacaatatgttgttgatttaccatcttagtgtgatgtttattaaatttaggttgaaagattagttttgatcaaatgtagatccaatcaatgatttt 30678495  T
Q  277 g 277  Q
    |    
T  30678496 g 30678496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 13269 - 13129
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||| || || || ||||||||||| || |||||    
T  13269 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttatttgattcaggt 13170  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  13169 tgaaagattagctttgagcaagtgcaaatccgatcaatgac 13129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 74161 - 74401
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  74161 aattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 74259  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||  |||||| || |||||| ||||||||||||||||  ||||||||||  ||||||||| ||||| |||| || | ||| |||||||| || ||    
T  74260 g--attttttcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttaatttcacatcttagtacggagtttatttgattca 74357  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    |||||||||||||||| |||||||||||| |||| |||||||||    
T  74358 ggttgaaagattagctttgagcaagtgcagatccgatcaatgac 74401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 133 - 258
Target Start/End: Original strand, 72 - 197
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||  || ||||||||||||||||| || ||| |||||||||| || |||||    
T  72 atttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgcgtttttgatttcccatcttagtgctgtgtttatttgattcaggt 171  T
Q  233 tgaaagattagctctgagcaagtgca 258  Q
    ||||||||||||| ||||||||||||    
T  172 tgaaagattagctttgagcaagtgca 197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 277
Target Start/End: Complemental strand, 1210 - 963
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  |||||||||||||||||   ||||||||||||||| |||| |||| |||||||| ||||||||||||           
T  1210 aattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttc-acatattttcagttttctttcgtttgtttttgt 1112  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatc---ataatgcggtgtttatttaat 226  Q
       |||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||| ||||||  ||    || |||||||| ||||| ||    
T  1111 g--atttcgtcgtctctgcacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtctaattagtgcggtgtatatttgat 1014  T
Q  227 ccaggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
     |||||||||||||||||| |||| || |||| || | |||||||||||||    
T  1013 tcaggttgaaagattagctttgagaaactgcagattcgatcaatgactttg 963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 34 - 277
Target Start/End: Complemental strand, 7245 - 7004
Alignment:
Q  34 tttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnnnnn 132  Q
    |||||||||||| |||||| |  ||||||||||||||| | | ||||||||||||||| |||| |||| ||||| || ||||||||||||              
T  7245 tttgacccaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgtg-- 7149  T
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| |  ||||||| |||||||||||||||| ||||||||||  ||||||||||||||||| ||  | ||| ||||||||||||| | |||    
T  7148 atttcgtcgtctataaacgactcggtttgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtctaagtgcagtgtttatttaattcgggt 7049  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    | |||||||||||  ||||||||||| |||| |||||||||||||    
T  7048 taaaagattagcttggagcaagtgcagatccgatcaatgactttg 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 133 - 272
Target Start/End: Complemental strand, 4091 - 3952
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||||||||||| || |||||| ||||||||||||||||  ||||||||||  | ||||||||||||||| || || ||||||||||||||||| |||||    
T  4091 atttcgtcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtatgtttttgatttcccgtcttagtgcggtgtttatttaattcaggt 3992  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatga 272  Q
    ||||| ||||||| |||||||||||| |||  ||||||||    
T  3991 tgaaatattagctttgagcaagtgcagatctgatcaatga 3952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 31 - 273
Target Start/End: Original strand, 6134 - 6374
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtttgnnnnnnn 129  Q
    ||||||||||||||| |||||| |  || |||||||||||||| | ||||||||||||||| |||| |||| ||||| || ||||||||||||           
T  6134 aattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttc-acatattttctgttttctttcgtttgtttttgt 6232  T
Q  130 nnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcca 229  Q
       ||||||||||||||| |||||| ||||||||||||||||  |||||| ||| |||||||||| |||| || || || | |||||||||||| ||| |    
T  6233 g--atttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcgatgtgttttttattttccgtcttagtacggtgtttatttgatcta 6330  T
Q  230 ggttgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| || ||  |||||||| || | |||||||||    
T  6331 ggttgaaagattaactttgcacaagtgcagattcgatcaatgac 6374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 1671 - 1811
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    ||||||||||||||| | |||| ||||||||| ||||||  ||||| ||||  ||||||||| ||||||| || || |||||||||||||| || |||||    
T  1671 atttcgtcgtctctgaaagactttgtttgtttcgatttcccgtcttagtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggt 1770  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||||||||| || |||| |||||||||    
T  1771 tgaaagattagctttgagcaagtacagatccgatcaatgac 1811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 133 - 273
Target Start/End: Original strand, 2999 - 3137
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggt 232  Q
    |||| ||||||| || | |||||||||||||||||||||  |||||||||| ||||||||  |||||||| |  || | |||||||||||| || |||||    
T  2999 attttgtcgtctatgaatgactctgtttgttttgatttcccgtctttgtgcgatgtgttt--gatttcccgttttagtacggtgtttatttgattcaggt 3096  T
Q  233 tgaaagattagctctgagcaagtgcaaatccaatcaatgac 273  Q
    ||||||||||||| ||| |||||||| |||| |||||||||    
T  3097 tgaaagattagctttgaacaagtgcagatccgatcaatgac 3137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 263
Target Start/End: Original strand, 35079 - 35311
Alignment:
Q  31 aattttgacccaaaa-tcacccatttgaattgtttttccttcttttctaattgaataagtgctttc-cacatgttttcagtcttctttcgtttgnnnnnn 128  Q
    ||||||||||||||| ||||||||  || |||||||||||||| | ||||||||||||||| |||| || || ||||| || ||||||||||||          
T  35079 aattttgacccaaaaatcacccatccgagttgtttttccttctatcctaattgaataagtgatttcacatatattttctgttttctttcgtttgtttttg 35178  T
Q  129 nnnnatttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatcc 228  Q
        ||||| || |||||  || | ||||||||||||||||||   |||||||||  ||| ||||| ||||| | || || |||||||||||||| ||      
T  35179 cg--atttcatcatctctaaacaaatctgtttgttttgatttcccatctttgtgcggtgtattttttatttctcgtcttagtgcggtgtttatttgattt 35276  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatcc 263  Q
    ||||||||| ||||||| |||||||||||||||||    
T  35277 aggttgaaatattagctttgagcaagtgcaaatcc 35311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 133 - 278
Target Start/End: Complemental strand, 404282 - 404134
Alignment:
Q  133 atttcgtcgtctctgcacgactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataa----tgcggtgtttatttaatcc 228  Q
    ||||||||||||||   ||||||||||||||||||||||  ||||||||||  ||||||||| |||| |  || |||    || ||||||||||| || |    
T  404282 atttcgtcgtctctaatcgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttattttcagtcttaattagtgtggtgtttatttgattc 404183  T
Q  229 aggttgaaagattagctctgagcaagtgcaaatccaatcaatgactttga 278  Q
    ||||||||||| ||||| |||||| ||||| || | ||||||||||||||    
T  404182 aggttgaaaga-tagctttgagcatgtgcagattcgatcaatgactttga 404134  T

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Target: scaffold0886 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 272
Target Start/End: Complemental strand, 3747 - 3626
Alignment:
Q  151 gactctgtttgttttgatttcttgtctttgtgcaatgtgtttttgatttcccatcataatgcggtgtttatttaatccaggttgaaagattagctctgag 250  Q
    |||| ||||| ||||||||| ||||||||||||| ||||||||||||||  | |  || || ||||| ||||| || |||||||||| ||||| | |||     
T  3747 gactttgtttattttgattttttgtctttgtgcagtgtgtttttgatttaacgttttagtgtggtgtctatttgattcaggttgaaatattagttttgat 3648  T
Q  251 caagtgcaaatccaatcaatga 272  Q
    ||||| || || ||||||||||    
T  3647 caagtacagattcaatcaatga 3626  T

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Target: scaffold0999 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 277
Target Start/End: Original strand, 1900 - 1945
Alignment:
Q  232 ttgaaagattagctctgagcaagtgcaaatccaatcaatgactttg 277  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||    
T  1900 ttgaaagattagctttgagcaagtgcagatccgatcaatgactttg 1945  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 202162 - 202084
Alignment:
Q  42 aaaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgttt 121  Q
    |||||||||| | | |||| ||||||||| |||| | ||| |||||||| ||||||||| |||||||| |||||||||||    
T  202162 aaaatcacccctctaaattatttttccttttttt-tcattaaataagtgatttccacatattttcagtattctttcgttt 202084  T

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Target: scaffold0238 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 15789 - 15713
Alignment:
Q  43 aaatcacccatttgaattgtttttccttcttttctaattgaataagtgctttccacatgttttcagtcttctttcgtt 120  Q
    |||||||| || | ||||||||||| |||| || ||||| |||||||| ||||||||| |||||||  ||||||||||    
T  15789 aaatcaccaatctaaattgtttttctttctcttttaattaaataagtgatttccacat-ttttcagctttctttcgtt 15713  T

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