View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12468_low_2 (Length: 416)
Name: NF12468_low_2
Description: NF12468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12468_low_2 |
 |  |
|
| [»] scaffold0036 (1 HSPs) |
 |  |  |
|
| [»] scaffold0011 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 361; Significance: 0; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 25 - 397
Target Start/End: Original strand, 41108007 - 41108379
Alignment:
| Q |
25 |
gttgtggagtctgtaagagcaccatgcgaccaccccagacagcatgtgtctgagaacgatcatctacagcacaagattatgtctcaacatgagaatcatc |
124 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41108007 |
gttgttgagtctgtaagagcaccatgcgaccaccccagacagcgtgtgtctgagaacgatcatctacagcacaagattatgtctcaacatgagaatcatc |
41108106 |
T |
 |
| Q |
125 |
tcagccattaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctata |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41108107 |
tcagccattaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctata |
41108206 |
T |
 |
| Q |
225 |
gaacagatcctgttcaagtaaggtcgtgactattgctccacgcgtgtgttatataaacacttgagttcttctagtttcaaacgatgtgggactaaaagct |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41108207 |
gaacagatcctgttcaagtaaggtcgtgactattgctccacgcgtgtgttatataaacacttgagttcttctagtttcaaacgatgtgggactaaaagct |
41108306 |
T |
 |
| Q |
325 |
tttttctgttgtatacttgcttataaaaaatgcttttgactcttgaaagttccagctttataacaaagttagt |
397 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41108307 |
tctttctgttgtatacttgcttataaaaaatgcttttgactcttgaaagttccagctttataacaaagttagt |
41108379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 7600990 - 7600923
Alignment:
| Q |
178 |
tgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaa |
245 |
Q |
| |
|
||||| ||| ||| ||||||||||||||||| | |||| | ||||||||||| ||||||| ||||||| |
|
|
| T |
7600990 |
tgttcatgtttccctagaaatcaaggacacaattgtacaagcctatagaacaaatcctgtccaagtaa |
7600923 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 33 - 317
Target Start/End: Original strand, 34913795 - 34914079
Alignment:
| Q |
33 |
gtctgtaagagcaccatgcgaccaccccagacagcatgtgtctgagaacgatcatctacagcacaagattatgtctcaacatgagaatcatctcagccat |
132 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | |
|
|
| T |
34913795 |
gtctgtaagagcaccgtgcaaccaccccagacaacatgtgtctgagaacgatcatctacagcacaagatgatgtctcaacatgagaatcatctaagccgt |
34913894 |
T |
 |
| Q |
133 |
taatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagat |
232 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34913895 |
taatcacgctctgatcgcacggtcttcattcatcatccagacgtatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagat |
34913994 |
T |
 |
| Q |
233 |
cctgttcaagtaaggtcgtgactattgctccacgcgtgtgttatataaacacttgagttcttctagtttcaaacgatgtgggact |
317 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | | ||| ||| ||| ||||||||||| |
|
|
| T |
34913995 |
cctgttcaagtaaggtcgtgacaattgttccacgtgtgtgttatataaacacttgagctgtgctaattttaaatgatgtgggact |
34914079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 33 - 317
Target Start/End: Complemental strand, 34906533 - 34906246
Alignment:
| Q |
33 |
gtctgtaagagcaccatgcgaccaccccagaca---gcatgtgtctgagaacgatcatctacagcacaagattatgtctcaacatgagaatcatctcagc |
129 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
34906533 |
gtctgtaagagcaccgtgcaaccaccccagacacatgcatgtgtctgagaacgatcatctacagcacaagatgatgtctcaacatgagaatcatctaagc |
34906434 |
T |
 |
| Q |
130 |
cattaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaaca |
229 |
Q |
| |
|
| |||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34906433 |
cgttaatcacgctctgatcgcacggtcttcattcatcatccagacgtatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaaca |
34906334 |
T |
 |
| Q |
230 |
gatcctgttcaagtaaggtcgtgactattgctccacgcgtgtgttatataaacacttgagttcttctagtttcaaacgatgtgggact |
317 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||| | | ||| ||| ||| ||||||||||| |
|
|
| T |
34906333 |
gatcctgttcaagtaaggtcgtgacaattgttccacgtgtgtgttatataaacacttgagctgtgctaattttaaatgatgtgggact |
34906246 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 31 - 381
Target Start/End: Complemental strand, 35702636 - 35702299
Alignment:
| Q |
31 |
gagtctgtaagagcaccatgcgaccaccccagacagcatgtgtctgagaacgatcatctacagcacaagattatg---tctcaacatgagaa---tcatc |
124 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| |
|
|
| T |
35702636 |
gagtctgtaagaacaccatgcaaccaccccagacagcgtgtgtctgagaacgatcatctacagcacaagatgatgatgtctcaacatgagaagaatcatc |
35702537 |
T |
 |
| Q |
125 |
tcagccattaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctata |
224 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| | |||||||||| ||| || ||||| ||||||||||||| |||||||| |
|
|
| T |
35702536 |
tcagccgttaatcacgctctgatcgcacggttgtctttcatcatcc-----tat--------------aggaatcatagacacagtagtaccatcctata |
35702456 |
T |
 |
| Q |
225 |
gaacagatcctgttcaagtaaggtcgtgactattgctccacgcgtgtgttatataaacacttgagttcttctagtttcaaacgatgtgggactaaaagct |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||| | || | |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
35702455 |
gaacagatcctgttcaagtaaggtcgtgaccaatgattcacgcgtgtgctatataaacatttgagttctgctagtttcaaacgatgtgggactaaaagcc |
35702356 |
T |
 |
| Q |
325 |
tttttctgttgt-atacttgcttataaaaaatgcttttgactcttgaaagttccagct |
381 |
Q |
| |
|
| |||||||||| ||||||| |||| ||||| |||| |||||||||||| || ||||| |
|
|
| T |
35702355 |
tgtttctgttgtaatacttggttat-aaaaacgcttctgactcttgaaaattgcagct |
35702299 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 33032677 - 33032799
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||||||||||||| || |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33032677 |
ttaatcacgctctgatcacacggtcacaaatcctcatccagatttatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
33032776 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgtgac |
254 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
33032777 |
tcctgttcaagtaaggtcgtgac |
33032799 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 33120237 - 33120359
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||||||||||||| || |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33120237 |
ttaatcacgctctgatcacacggtcacaaatcctcatccagatttatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
33120336 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgtgac |
254 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
33120337 |
tcctgttcaagtaaggtcgtgac |
33120359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 251
Target Start/End: Original strand, 1470600 - 1470719
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||| ||||||||| || |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1470600 |
ttaatcatgctctgatcacacggtcatggttcatccaccagacgtatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaataga |
1470699 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgt |
251 |
Q |
| |
|
|| ||||||||||||||||| |
|
|
| T |
1470700 |
tcatgttcaagtaaggtcgt |
1470719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 35725737 - 35725680
Alignment:
| Q |
39 |
aagagcaccatgcgaccaccccagacagcatgtgt--ctgagaacgatcatctacagc |
94 |
Q |
| |
|
|||| |||| ||| ||||||||||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
35725737 |
aagaacaccgtgcaaccaccccagacagcgtgtgtgtctgagaacgatcatctacagc |
35725680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0036 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0036
Description:
Target: scaffold0036; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 19857 - 19702
Alignment:
| Q |
36 |
tgtaagagcaccatgcgaccaccccagacagcatgtgtctgagaacgatcatctacagcacaagattatgtctcaacatgagaatcatctcagccattaa |
135 |
Q |
| |
|
|||||||||||| |||| |||||||||| ||| | |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||| |
|
|
| T |
19857 |
tgtaagagcaccgtgcggccaccccagatagcgtttgtctgagaacgattatctacagcacaagatgatgtcttaacatgagaatcatctcagccgttaa |
19758 |
T |
 |
| Q |
136 |
tcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctcct |
191 |
Q |
| |
|
||||||||||||| || |||||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
19757 |
tcacgctctgatctcacggtcttcgttcatcatctagacatatgttcctgtctcct |
19702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 93; Significance: 4e-45; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 10101036 - 10101156
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||||||||||||| || |||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10101036 |
ttaatcacgctctgatcacacggtcatggttcatccaccagacgtatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
10101135 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgtg |
252 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10101136 |
tcctgttcaagtaaggtcgtg |
10101156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 252
Target Start/End: Complemental strand, 9678824 - 9678699
Alignment:
| Q |
127 |
agccattaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctataga |
226 |
Q |
| |
|
|||| ||||||||||||||||| || ||| | |||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
9678824 |
agccgttaatcacgctctgatcacacagtcatgattcatccaccagacgtatgttcctgtctcctttgaaatcaaggacacagtagtacgatcctataga |
9678725 |
T |
 |
| Q |
227 |
acagatcctgttcaagtaaggtcgtg |
252 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
9678724 |
acagatcctgttcaagtaaggtcgtg |
9678699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 10104839 - 10104959
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||||||||||||| || |||| | ||||||| |||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10104839 |
ttaatcacgctctgatcacacggtcatggttcatccaccagacgtatgctcctgtcttcttagaaatcaaggacacagtagtataatcctatagaacaga |
10104938 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgtg |
252 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10104939 |
tcctgttcaagtaaggtcgtg |
10104959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 132 - 252
Target Start/End: Complemental strand, 10214510 - 10214390
Alignment:
| Q |
132 |
ttaatcacgctctgatcgcatggtctttgttcatcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacaga |
231 |
Q |
| |
|
||||||||||||||||| || |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10214510 |
ttaatcacgctctgatcacacggtcacaactcatctaccagacatatgttcctatctccttagaaatcaaggacacagtagtacaatcctatagaacaga |
10214411 |
T |
 |
| Q |
232 |
tcctgttcaagtaaggtcgtg |
252 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
10214410 |
tcctgttcaagtaaggtcgtg |
10214390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 21036232 - 21036305
Alignment:
| Q |
178 |
tgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgt |
251 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21036232 |
tgtttctgtttccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgt |
21036305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 20982827 - 20982899
Alignment:
| Q |
178 |
tgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgt |
251 |
Q |
| |
|
||||| || |||||||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
20982827 |
tgttcgtgcctccttagaaatcaaggatacaatagtacgatcctatagatcagatcctgttc-agtaaggtcgt |
20982899 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 248
Target Start/End: Complemental strand, 26384491 - 26384421
Alignment:
| Q |
178 |
tgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggt |
248 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26384491 |
tgtttctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggt |
26384421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 22366743 - 22366684
Alignment:
| Q |
200 |
aaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgtgactattg |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22366743 |
aaggacacagtagtacgatcctatagaacagatcctgttcaaataaggtcgtgactattg |
22366684 |
T |
 |
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Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 5130675 - 5130615
Alignment:
| Q |
191 |
ttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgt |
251 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
5130675 |
ttagaaatcaaggacacagtaatacgatcctataaaagagatcttgttcaagtaaggtcgt |
5130615 |
T |
 |
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Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 1086910 - 1086970
Alignment:
| Q |
191 |
ttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtcgt |
251 |
Q |
| |
|
|||||||||||||||||| |||||||||| |||| || ||||| ||||||||||||||||| |
|
|
| T |
1086910 |
ttagaaatcaaggacacaatagtacgatcttataaaatagatcttgttcaagtaaggtcgt |
1086970 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 7224449 - 7224365
Alignment:
| Q |
165 |
tcatccagacatatgttcctgtctccttagaaatcaaggacacagtagtacgatcctatagaacagatcctgttcaagtaaggtc |
249 |
Q |
| |
|
||||||||| ||||||| |||||||||||||||||||||| || | ||||||||||||||||| ||| | || |||||||||| |
|
|
| T |
7224449 |
tcatccagatttatgttcatgtctccttagaaatcaaggacgcaatgttacgatcctatagaacaaatcatatttaagtaaggtc |
7224365 |
T |
 |
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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:
Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 17071 - 17017
Alignment:
| Q |
53 |
accaccccagacagcatgtgtctgagaacgatcatctacagcacaagattatgtc |
107 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||| |||| ||||||| ||||| |
|
|
| T |
17071 |
accacccccgacagtatgtgtctgagaacgatcatccacagtacaagatgatgtc |
17017 |
T |
 |
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