View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12468_low_9 (Length: 225)
Name: NF12468_low_9
Description: NF12468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12468_low_9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 24572609 - 24572411
Alignment:
| Q |
25 |
atttatagtttacactatactatatttatgtagcacgtaccagctatcattttaattccagaaaattattgcttgcaactattcttaatctcttcaactg |
124 |
Q |
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| T |
24572609 |
atttatagtttacactatactatatttatgtagcacgtaccagctatcatttttattccagaaaattattgcttgcaactattcttaatttcttcaactg |
24572510 |
T |
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| Q |
125 |
tattccattttctaaaagaaattcatcaatggatgtgtagtgtatgtttatttgttattttatctttattaacaatgaatgaattagtctaagtcgtaag |
224 |
Q |
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| T |
24572509 |
tattccattttctaaaagaaattcatcaatgga--tgtagtgtatgtttatttgttattttacctttattaacaatgaatgaattagtgtaagtagtaag |
24572412 |
T |
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