View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1246_low_91 (Length: 292)

Name: NF1246_low_91
Description: NF1246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1246_low_91
NF1246_low_91
[»] chr4 (56 HSPs)
chr4 (10-144)||(22558667-22558801)
chr4 (34-144)||(2520574-2520684)
chr4 (39-144)||(4142956-4143061)
chr4 (39-136)||(26633880-26633977)
chr4 (49-144)||(53810840-53810935)
chr4 (50-144)||(35348119-35348213)
chr4 (47-144)||(13633924-13634020)
chr4 (39-136)||(22610986-22611082)
chr4 (49-144)||(19853714-19853808)
chr4 (47-136)||(10496152-10496241)
chr4 (47-136)||(48257659-48257748)
chr4 (48-144)||(43510010-43510106)
chr4 (39-142)||(26091117-26091220)
chr4 (47-144)||(9165244-9165342)
chr4 (38-144)||(53443927-53444032)
chr4 (47-144)||(21686443-21686539)
chr4 (39-136)||(22300647-22300744)
chr4 (47-136)||(29961139-29961228)
chr4 (50-144)||(32766326-32766421)
chr4 (47-136)||(9178167-9178256)
chr4 (39-144)||(54021663-54021768)
chr4 (39-135)||(47320612-47320708)
chr4 (47-117)||(56156782-56156852)
chr4 (33-122)||(33920848-33920937)
chr4 (77-144)||(56040847-56040915)
chr4 (62-144)||(24099272-24099355)
chr4 (47-141)||(51888421-51888515)
chr4 (39-135)||(9643179-9643276)
chr4 (58-144)||(5119159-5119246)
chr4 (38-136)||(18935588-18935686)
chr4 (52-122)||(43126694-43126764)
chr4 (47-93)||(51024714-51024760)
chr4 (218-263)||(24099149-24099194)
chr4 (52-144)||(10259097-10259188)
chr4 (70-122)||(40066265-40066317)
chr4 (47-144)||(45418339-45418433)
chr4 (39-125)||(21662287-21662372)
chr4 (39-125)||(21671051-21671136)
chr4 (217-263)||(22558547-22558593)
chr4 (90-136)||(36161567-36161613)
chr4 (217-260)||(40066140-40066183)
chr4 (74-121)||(43095471-43095518)
chr4 (217-263)||(4142837-4142883)
chr4 (217-263)||(13634096-13634142)
chr4 (217-263)||(22611164-22611210)
chr4 (217-263)||(26633753-26633799)
chr4 (217-263)||(28857380-28857426)
chr4 (69-135)||(29121889-29121954)
chr4 (217-263)||(35348288-35348334)
chr4 (39-141)||(36204586-36204687)
chr4 (217-263)||(56040728-56040774)
chr4 (103-132)||(13863164-13863193)
chr4 (39-136)||(27651750-27651847)
chr4 (217-265)||(19853592-19853640)
chr4 (218-262)||(52061006-52061050)
chr4 (217-265)||(56156722-56156770)
[»] chr7 (45 HSPs)
chr7 (21-136)||(48061188-48061303)
chr7 (29-144)||(12141510-12141625)
chr7 (47-144)||(37837660-37837757)
chr7 (47-144)||(42978400-42978497)
chr7 (39-144)||(8013667-8013772)
chr7 (47-136)||(9450347-9450436)
chr7 (39-144)||(19404956-19405061)
chr7 (39-144)||(30757021-30757126)
chr7 (39-144)||(19296662-19296767)
chr7 (47-144)||(39171794-39171891)
chr7 (39-144)||(34899809-34899911)
chr7 (50-144)||(48317014-48317108)
chr7 (47-144)||(13797133-13797230)
chr7 (39-144)||(47590098-47590202)
chr7 (55-134)||(24770055-24770134)
chr7 (49-144)||(40992976-40993070)
chr7 (39-141)||(5078598-5078700)
chr7 (47-105)||(45350433-45350491)
chr7 (49-136)||(38798584-38798668)
chr7 (47-122)||(39329017-39329092)
chr7 (52-122)||(9915941-9916011)
chr7 (52-122)||(9923853-9923923)
chr7 (39-125)||(25287402-25287488)
chr7 (61-144)||(35132757-35132840)
chr7 (217-260)||(48061385-48061428)
chr7 (217-263)||(8001628-8001674)
chr7 (61-135)||(22087123-22087197)
chr7 (39-136)||(24351053-24351150)
chr7 (33-121)||(3224642-3224730)
chr7 (47-131)||(4529871-4529955)
chr7 (76-136)||(38051276-38051336)
chr7 (61-136)||(1749351-1749426)
chr7 (97-136)||(45350012-45350051)
chr7 (217-263)||(12141390-12141436)
chr7 (217-263)||(19296833-19296879)
chr7 (217-263)||(30756901-30756947)
chr7 (217-263)||(34899689-34899735)
chr7 (217-263)||(37837540-37837586)
chr7 (217-263)||(42978573-42978619)
chr7 (39-136)||(5348794-5348890)
chr7 (217-262)||(26623873-26623918)
chr7 (95-136)||(28476063-28476104)
chr7 (217-265)||(3394434-3394482)
chr7 (39-71)||(24350709-24350741)
chr7 (102-138)||(39228862-39228898)
[»] scaffold0884 (2 HSPs)
scaffold0884 (21-144)||(2174-2297)
scaffold0884 (217-265)||(2053-2101)
[»] chr1 (46 HSPs)
chr1 (23-144)||(29738838-29738959)
chr1 (24-135)||(5983606-5983717)
chr1 (47-135)||(34878482-34878570)
chr1 (39-144)||(31983965-31984070)
chr1 (33-144)||(45415338-45415449)
chr1 (31-141)||(11462653-11462763)
chr1 (47-125)||(35484599-35484677)
chr1 (39-136)||(10776670-10776767)
chr1 (49-119)||(41176977-41177047)
chr1 (33-144)||(14872418-14872529)
chr1 (50-144)||(7337865-7337959)
chr1 (73-134)||(32394818-32394879)
chr1 (39-135)||(51916863-51916959)
chr1 (53-136)||(7836976-7837059)
chr1 (33-122)||(35462262-35462351)
chr1 (33-141)||(1742060-1742168)
chr1 (41-141)||(18939109-18939209)
chr1 (47-144)||(15435074-15435171)
chr1 (35-118)||(4413085-4413168)
chr1 (58-144)||(44915449-44915536)
chr1 (39-144)||(21686658-21686762)
chr1 (52-136)||(3228068-3228152)
chr1 (33-141)||(45789344-45789452)
chr1 (39-134)||(32679311-32679406)
chr1 (47-141)||(49626703-49626797)
chr1 (33-114)||(26535179-26535260)
chr1 (49-144)||(36894443-36894535)
chr1 (33-121)||(21947843-21947930)
chr1 (69-136)||(23291852-23291922)
chr1 (62-136)||(15836001-15836075)
chr1 (100-137)||(9341571-9341608)
chr1 (39-111)||(27456325-27456397)
chr1 (74-134)||(50377148-50377207)
chr1 (61-144)||(8212112-8212195)
chr1 (39-134)||(44543058-44543153)
chr1 (217-263)||(5983800-5983846)
chr1 (217-263)||(7337745-7337791)
chr1 (217-263)||(7836878-7836924)
chr1 (217-263)||(45415522-45415568)
chr1 (221-261)||(34528695-34528735)
chr1 (62-141)||(16161640-16161719)
chr1 (217-263)||(1742245-1742291)
chr1 (217-263)||(11462530-11462576)
chr1 (39-136)||(12634952-12635049)
chr1 (53-138)||(31317550-31317635)
chr1 (217-265)||(19060871-19060919)
[»] chr5 (33 HSPs)
chr5 (39-144)||(6012340-6012445)
chr5 (39-144)||(13007010-13007115)
chr5 (47-144)||(38597587-38597684)
chr5 (47-144)||(38007147-38007244)
chr5 (59-144)||(31391959-31392044)
chr5 (49-144)||(9113927-9114022)
chr5 (40-136)||(34945204-34945300)
chr5 (51-125)||(25979951-25980025)
chr5 (49-144)||(26825220-26825317)
chr5 (47-144)||(26878281-26878377)
chr5 (47-135)||(7036017-7036105)
chr5 (46-136)||(35850573-35850662)
chr5 (47-143)||(11074103-11074199)
chr5 (47-112)||(11977171-11977236)
chr5 (50-142)||(8096701-8096792)
chr5 (40-134)||(6216676-6216771)
chr5 (47-136)||(7929988-7930073)
chr5 (62-136)||(14082581-14082655)
chr5 (47-112)||(4770927-4770992)
chr5 (47-136)||(13421733-13421821)
chr5 (47-134)||(15571275-15571363)
chr5 (47-114)||(24230018-24230086)
chr5 (39-135)||(39567077-39567173)
chr5 (217-266)||(24229863-24229912)
chr5 (39-114)||(8985169-8985244)
chr5 (217-263)||(6012220-6012266)
chr5 (217-263)||(6216859-6216905)
chr5 (217-263)||(9113807-9113853)
chr5 (217-263)||(13007189-13007235)
chr5 (39-141)||(14211015-14211116)
chr5 (217-263)||(38597757-38597803)
chr5 (217-262)||(14082456-14082501)
chr5 (89-136)||(10722604-10722652)
[»] chr8 (40 HSPs)
chr8 (47-144)||(31013771-31013868)
chr8 (33-144)||(17693814-17693924)
chr8 (25-144)||(23230414-23230532)
chr8 (49-131)||(10377491-10377573)
chr8 (39-136)||(25191274-25191371)
chr8 (47-144)||(45446011-45446108)
chr8 (47-144)||(7677480-7677577)
chr8 (47-144)||(29937907-29938003)
chr8 (47-136)||(20553453-20553542)
chr8 (47-144)||(20559944-20560041)
chr8 (47-144)||(20571506-20571603)
chr8 (47-124)||(27110684-27110761)
chr8 (33-144)||(40211505-40211617)
chr8 (47-122)||(8412571-8412646)
chr8 (47-144)||(37971087-37971181)
chr8 (47-134)||(33214840-33214928)
chr8 (39-125)||(1236912-1236998)
chr8 (39-136)||(8980981-8981078)
chr8 (50-144)||(3673241-3673334)
chr8 (38-125)||(15344089-15344176)
chr8 (38-125)||(15433154-15433241)
chr8 (38-125)||(15524458-15524545)
chr8 (40-121)||(7883463-7883544)
chr8 (47-144)||(28897503-28897600)
chr8 (47-141)||(1239606-1239700)
chr8 (50-136)||(8443729-8443814)
chr8 (49-144)||(14545102-14545198)
chr8 (47-114)||(27498565-27498632)
chr8 (217-263)||(7677363-7677409)
chr8 (217-263)||(37971246-37971292)
chr8 (217-266)||(40619150-40619199)
chr8 (39-122)||(36948658-36948742)
chr8 (217-260)||(20553324-20553367)
chr8 (47-142)||(41684225-41684320)
chr8 (90-136)||(8826043-8826089)
chr8 (217-263)||(23230606-23230652)
chr8 (39-141)||(24099465-24099565)
chr8 (95-136)||(14916345-14916385)
chr8 (39-136)||(29617665-29617762)
chr8 (74-122)||(3240194-3240242)
[»] chr2 (55 HSPs)
chr2 (49-144)||(7646274-7646369)
chr2 (39-144)||(4778545-4778650)
chr2 (26-130)||(5428084-5428188)
chr2 (47-144)||(7678080-7678177)
chr2 (47-144)||(43397321-43397418)
chr2 (49-144)||(7448050-7448145)
chr2 (50-136)||(27097615-27097701)
chr2 (32-144)||(1421456-1421569)
chr2 (47-144)||(12677498-12677595)
chr2 (47-144)||(36943326-36943423)
chr2 (47-144)||(31788256-31788353)
chr2 (49-144)||(9169460-9169554)
chr2 (45-136)||(37876808-37876899)
chr2 (39-136)||(4098895-4098992)
chr2 (47-144)||(18763268-18763365)
chr2 (47-144)||(11985432-11985529)
chr2 (34-120)||(31128974-31129060)
chr2 (39-136)||(4904346-4904443)
chr2 (47-136)||(12648134-12648223)
chr2 (47-141)||(35220131-35220222)
chr2 (48-139)||(18107943-18108034)
chr2 (62-144)||(38444982-38445063)
chr2 (51-135)||(24461243-24461327)
chr2 (50-141)||(17994921-17995012)
chr2 (39-141)||(32448826-32448928)
chr2 (49-144)||(8809084-8809178)
chr2 (47-112)||(36691666-36691732)
chr2 (47-123)||(29279794-29279869)
chr2 (39-99)||(42698922-42698982)
chr2 (39-136)||(29574843-29574938)
chr2 (56-141)||(37994084-37994168)
chr2 (217-265)||(5427949-5427997)
chr2 (33-121)||(37416488-37416576)
chr2 (38-134)||(41694406-41694502)
chr2 (47-94)||(4042229-4042276)
chr2 (98-141)||(6436459-6436502)
chr2 (71-122)||(25509291-25509342)
chr2 (47-134)||(28718160-28718245)
chr2 (49-136)||(39311059-39311145)
chr2 (217-263)||(7646444-7646490)
chr2 (217-263)||(7677956-7678002)
chr2 (217-263)||(12648006-12648052)
chr2 (217-263)||(18763439-18763485)
chr2 (33-122)||(28871987-28872074)
chr2 (217-263)||(36943204-36943250)
chr2 (217-263)||(37876689-37876735)
chr2 (95-136)||(3308787-3308828)
chr2 (47-80)||(8809003-8809036)
chr2 (101-134)||(11833338-11833371)
chr2 (61-122)||(13120022-13120083)
chr2 (39-136)||(20145914-20146011)
chr2 (218-263)||(27097489-27097534)
chr2 (78-135)||(30400250-30400307)
chr2 (88-144)||(19062554-19062609)
chr2 (217-265)||(43397200-43397248)
[»] chr6 (28 HSPs)
chr6 (47-144)||(12170286-12170383)
chr6 (49-144)||(33053370-33053465)
chr6 (27-144)||(7515403-7515521)
chr6 (49-144)||(23128411-23128506)
chr6 (47-136)||(3913784-3913872)
chr6 (49-144)||(605997-606092)
chr6 (55-144)||(29320064-29320153)
chr6 (47-144)||(30894428-30894524)
chr6 (49-136)||(68211-68297)
chr6 (47-136)||(32328793-32328882)
chr6 (69-144)||(34018373-34018448)
chr6 (50-122)||(9723602-9723675)
chr6 (39-141)||(4010705-4010807)
chr6 (47-122)||(9719613-9719691)
chr6 (47-93)||(9721763-9721809)
chr6 (47-124)||(29255664-29255741)
chr6 (217-265)||(23128580-23128628)
chr6 (47-114)||(127468-127534)
chr6 (39-136)||(30493317-30493413)
chr6 (47-144)||(30608715-30608811)
chr6 (39-124)||(32191954-32192038)
chr6 (217-261)||(7515286-7515330)
chr6 (51-122)||(24227936-24228007)
chr6 (32-122)||(27097834-27097924)
chr6 (217-263)||(32327299-32327345)
chr6 (217-263)||(33053250-33053296)
chr6 (217-266)||(127632-127681)
chr6 (218-266)||(3355080-3355128)
[»] chr3 (61 HSPs)
chr3 (23-144)||(12050850-12050971)
chr3 (49-144)||(10232862-10232957)
chr3 (50-144)||(6954898-6954992)
chr3 (47-144)||(47895941-47896038)
chr3 (49-144)||(9998258-9998354)
chr3 (47-135)||(40487115-40487203)
chr3 (47-134)||(38545625-38545712)
chr3 (50-144)||(32701291-32701385)
chr3 (47-124)||(45568666-45568743)
chr3 (49-144)||(21431417-21431511)
chr3 (49-136)||(40556503-40556590)
chr3 (50-136)||(48650945-48651031)
chr3 (49-144)||(10108030-10108123)
chr3 (47-144)||(9797732-9797826)
chr3 (50-144)||(47042254-47042348)
chr3 (50-144)||(52923318-52923411)
chr3 (47-144)||(33579658-33579755)
chr3 (34-144)||(21534012-21534120)
chr3 (49-144)||(10229266-10229363)
chr3 (47-121)||(35865158-35865232)
chr3 (47-133)||(7449115-7449200)
chr3 (47-133)||(7457257-7457342)
chr3 (62-144)||(54148793-54148875)
chr3 (47-134)||(26276005-26276092)
chr3 (49-144)||(36461633-36461728)
chr3 (39-144)||(12149984-12150089)
chr3 (47-136)||(43016645-43016736)
chr3 (47-134)||(31272018-31272106)
chr3 (39-141)||(50194488-50194590)
chr3 (39-144)||(43488792-43488904)
chr3 (39-134)||(629118-629213)
chr3 (47-122)||(953631-953706)
chr3 (47-122)||(36910879-36910954)
chr3 (45-110)||(37040570-37040635)
chr3 (39-112)||(53808096-53808169)
chr3 (50-121)||(46220471-46220543)
chr3 (39-122)||(14859279-14859362)
chr3 (47-141)||(20465173-20465265)
chr3 (39-141)||(21290024-21290126)
chr3 (74-135)||(4821624-4821685)
chr3 (217-265)||(45568525-45568573)
chr3 (73-144)||(20609099-20609170)
chr3 (39-141)||(29249025-29249128)
chr3 (39-141)||(29921834-29921937)
chr3 (39-141)||(29970987-29971090)
chr3 (47-141)||(7546400-7546494)
chr3 (217-263)||(9998427-9998473)
chr3 (217-263)||(10108196-10108242)
chr3 (217-263)||(10233030-10233076)
chr3 (217-263)||(12050730-12050776)
chr3 (39-81)||(20988020-20988062)
chr3 (217-263)||(21431585-21431631)
chr3 (217-263)||(29239300-29239346)
chr3 (217-263)||(36461513-36461559)
chr3 (217-263)||(38860202-38860248)
chr3 (217-263)||(40487285-40487331)
chr3 (217-263)||(40556672-40556718)
chr3 (217-259)||(54148951-54148993)
chr3 (218-263)||(9320018-9320063)
chr3 (217-265)||(35865012-35865060)
chr3 (94-142)||(51486939-51486987)
[»] scaffold0127 (1 HSPs)
scaffold0127 (47-144)||(15282-15379)
[»] scaffold0026 (1 HSPs)
scaffold0026 (49-136)||(72074-72161)
[»] scaffold0445 (2 HSPs)
scaffold0445 (39-143)||(1126-1230)
scaffold0445 (217-265)||(1305-1353)
[»] scaffold0088 (1 HSPs)
scaffold0088 (49-144)||(50578-50673)
[»] scaffold0017 (2 HSPs)
scaffold0017 (47-144)||(32950-33047)
scaffold0017 (217-263)||(32829-32875)
[»] scaffold0219 (1 HSPs)
scaffold0219 (47-144)||(15040-15137)
[»] scaffold0634 (1 HSPs)
scaffold0634 (39-144)||(8296-8401)
[»] scaffold0087 (1 HSPs)
scaffold0087 (78-144)||(25531-25597)
[»] scaffold0009 (1 HSPs)
scaffold0009 (39-141)||(58284-58386)
[»] scaffold0603 (1 HSPs)
scaffold0603 (38-135)||(7499-7595)
[»] scaffold0554 (1 HSPs)
scaffold0554 (50-120)||(10672-10742)
[»] scaffold0262 (1 HSPs)
scaffold0262 (42-122)||(2041-2121)
[»] scaffold0154 (1 HSPs)
scaffold0154 (48-135)||(25124-25209)
[»] scaffold0492 (1 HSPs)
scaffold0492 (62-136)||(12721-12795)
[»] scaffold0121 (1 HSPs)
scaffold0121 (52-118)||(31499-31565)
[»] scaffold0064 (1 HSPs)
scaffold0064 (39-121)||(19261-19342)
[»] scaffold0136 (1 HSPs)
scaffold0136 (50-121)||(10264-10333)
[»] scaffold0888 (1 HSPs)
scaffold0888 (95-141)||(1879-1925)
[»] scaffold0039 (1 HSPs)
scaffold0039 (96-134)||(92939-92977)
[»] scaffold0049 (1 HSPs)
scaffold0049 (79-144)||(71485-71549)


Alignment Details
Target: chr4 (Bit Score: 119; Significance: 8e-61; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 10 - 144
Target Start/End: Complemental strand, 22558801 - 22558667
Alignment:
Q  10 attattctctagtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttt 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  22558801 attattctctagtcaatgattctcttagatttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttt 22558702  T
Q  110 taggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||| ||||||||||||||||||    
T  22558701 taggtcattttttgacatagaatcacctctctaca 22558667  T

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Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 34 - 144
Target Start/End: Original strand, 2520574 - 2520684
Alignment:
Q  34 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 133  Q
    |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  2520574 ttagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatc 2520673  T
Q  134 acctctctaca 144  Q
    ||| |||||||    
T  2520674 acccctctaca 2520684  T

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Target: chr4; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 4143061 - 4142956
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4143061 tttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4142962  T
Q  139 tctaca 144  Q
    ||||||    
T  4142961 tctaca 4142956  T

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Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 26633977 - 26633880
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  26633977 tttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacc 26633880  T

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Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 53810840 - 53810935
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  53810840 gagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctctaca 53810935  T

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Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 35348119 - 35348213
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||| |||||||| ||||||||||| |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  35348119 agaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctctctaca 35348213  T

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Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 13633924 - 13634020
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||||||| |||||||| |||||||||| |||||||    
T  13633924 gagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtca-tttttgacatagaatcacccctctaca 13634020  T

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Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 22610986 - 22611082
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||    
T  22610986 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtca-tttttgacctagaatcacc 22611082  T

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Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 19853808 - 19853714
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  19853808 gagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctaca 19853714  T

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Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 10496152 - 10496241
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||| | ||||||||||| ||||||||||||| ||||||| |||||||||||||| |||||||| ||||||||||    
T  10496152 gagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatcacc 10496241  T

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Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 48257748 - 48257659
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  48257748 gagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacc 48257659  T

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Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 43510010 - 43510106
Alignment:
Q  48 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| |||||||||| ||||||||| ||||||||||||||| || || ||||||||||||||||||||||||| |||||||||  |||||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctaca 43510106  T

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Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 26091220 - 26091117
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||| | ||| |||||||| |||||||||| |||||||||| |    
T  26091220 tttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacccc 26091121  T
Q  139 tcta 142  Q
    ||||    
T  26091120 tcta 26091117  T

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Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 9165342 - 9165244
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat-tttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||| ||| || ||||| |||||| |||||||||||||||| ||||| || |||||||||| |||||||    
T  9165342 gagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctaca 9165244  T

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Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 144
Target Start/End: Original strand, 53443927 - 53444032
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacct 137  Q
    |||||||| |||| ||||| |||||||||| |||||||| |||||| |||||||||||||||| | ||||||||||||| |||||||| ||||| ||||     
T  53443927 gtttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtca-tttttgacctagaaacaccc 53444025  T
Q  138 ctctaca 144  Q
    |||||||    
T  53444026 ctctaca 53444032  T

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Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 21686539 - 21686443
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||  ||||||||| |||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| || ||||||| |||||||    
T  21686539 gagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtc-ttttttgacctaaaatcacccctctaca 21686443  T

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Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 22300647 - 22300744
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||| |||  || | ||||||| ||||||||||||||||||||||| || |||||||    
T  22300647 tttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacc 22300744  T

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Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 29961228 - 29961139
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||| |||||||||||| ||||| |||||| || ||||| || |||||||| |||||||||| ||||||||||    
T  29961228 gagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacc 29961139  T

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Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 32766326 - 32766421
Alignment:
Q  50 agaaactccaacttct--ctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||  ||| ||| ||| ||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||    
T  32766326 agaaactccaacttctttctaaaaaattt-tttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaatcacccctctaca 32766421  T

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Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 9178167 - 9178256
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||| ||  |||||| |||| |||||||||||||| |||||  |||||||||||| ||||||||||||||||| ||||||||||    
T  9178167 gagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaatcacc 9178256  T

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Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 54021663 - 54021768
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| ||| |||||| |||||||||||||| |||| ||||| ||||  | ||||||||||||||||||||||| || ||||| | |    
T  54021663 tttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccc 54021762  T
Q  139 tctaca 144  Q
    ||||||    
T  54021763 tctaca 54021768  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 47320708 - 47320612
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| |||| ||| |||||||||||||||||||| ||||||||| ||||||    
T  47320708 tttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttgacttaaaatcac 47320612  T

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Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 56156852 - 56156782
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcat 117  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||  |||| |||||||||||||||||    
T  56156852 gagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

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Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 33920848 - 33920937
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||| ||||||| |||||||||| |||||| ||  |||||||||||||| |||| ||||| ||| | ||||||||||||||||||||||    
T  33920848 cttagttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt 33920937  T

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Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 56040915 - 56040847
Alignment:
Q  77 ctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||| |||||||    
T  56040915 ctttctccttcgttcactgaggagaggtggttttaggtcatttttttgacctagaatcacccctctaca 56040847  T

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Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 24099355 - 24099272
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt-ttttgacttagaatcacctctctaca 144  Q
    |||||| |||||||||||||| || ||||||| |||||| ||||||||||||||||| ||||||| |||||||| | |||||||    
T  24099355 ttctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctaca 24099272  T

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Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 51888515 - 51888421
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||||| |||||| ||| ||   |||||||||| |||  |||| ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  51888515 gagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttgacattgaatcacccctct 51888421  T

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Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 9643179 - 9643276
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcac 135  Q
    ||||||| ||||||||||||||||||||| |||  ||||||| || || | |||| || |||||| |||||||| ||||||||||||| |||||||||    
T  9643179 tttttagtgagagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcac 9643276  T

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Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 5119159 - 5119246
Alignment:
Q  58 caacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctaca 144  Q
    |||||||| | |||||||| |||||||||| |||||  |||||||||||||||| |||| |||||| || |||||||||| |||||||    
T  5119159 caacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcattttttttacctagaatcacccctctaca 5119246  T

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Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 18935588 - 18935686
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||| |||||||||||   ||||||| |||  |||||| ||| |||| |||| ||||||||||| ||| |||||| |||||||| ||||||||||    
T  18935588 gtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgacctagaatcacc 18935686  T

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Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 43126694 - 43126764
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||||| |||||||||||| |  ||||||||| || |||||||| ||||||||| ||||||    
T  43126694 aaactccaacttctctctaaactttctttttttttcgttcatcgaagaggggtgattttaggtcttttttt 43126764  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 51024760 - 51024714
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcat 93  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||    
T  51024760 gagagaaactccaacttctctctatactttctttctccttcgttcat 51024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 24099194 - 24099149
Alignment:
Q  218 tgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  24099194 tgatttcgtcgtctaagtgcggcattttgttgttcgtcgtcttgtg 24099149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 144
Target Start/End: Complemental strand, 10259188 - 10259097
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| |  ||   ||||||||||||| |||||||| || ||||||| |||||||    
T  10259188 aaactccaacttctctctaaacattctttctccttcgtttattaaaaagaactggttttaggtca-tttttgacctaaaatcacccctctaca 10259097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 40066317 - 40066265
Alignment:
Q  70 aaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||| ||||||||||||   |||||||||||||||||||||||    
T  40066317 aaactttctttctcattcgttcattgaattggggtggttttaggtcatttttt 40066265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 45418339 - 45418433
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||| ||||| |||||||||| ||||  || |||||||| | ||||| ||||||   |||||||||||||||||||||| |||||||| | |||||||    
T  45418339 gagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacctagaatcatccctctaca 45418433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 21662287 - 21662372
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21662287 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21662372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 21671051 - 21671136
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||| || ||||  ||||| || ||| |||| ||||||||| |||| ||||  |||||||||||||||||||||||||||||||    
T  21671051 tttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattcac-gaggaggggtggttttaggtcattttttgac 21671136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 22558593 - 22558547
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  22558593 gtgattttatcgtctaagtgcggcattttgttgttcatcgtcttgtg 22558547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 36161567 - 36161613
Alignment:
Q  90 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||| |||||| |||||||||||||||||||||||| ||||||||||    
T  36161567 tcatcgaggagaggtggttttaggtcattttttgacctagaatcacc 36161613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 40066183 - 40066140
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtctt 260  Q
    ||||||||||||||||| |||||| || ||||||||||||||||    
T  40066183 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtctt 40066140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 43095471 - 43095518
Alignment:
Q  74 tttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    |||||||||||||| ||| ||||||| |||| ||||||||||||||||    
T  43095471 tttctttctccttcattcgttgaggaagggtagttttaggtcattttt 43095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 4142883 - 4142837
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  4142883 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 4142837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 13634096 - 13634142
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  13634096 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 13634142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 22611164 - 22611210
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  22611164 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 22611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 26633799 - 26633753
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  26633799 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 26633753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 28857380 - 28857426
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||| || |||||||||| ||||||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtg 28857426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 29121954 - 29121889
Alignment:
Q  69 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    |||| ||| |||||||||||||||| ||||| |  |||||||||||||||||||||| || ||||||    
T  29121954 taaattttatttctccttcgttcatcgaggatga-tggttttaggtcattttttgacctaaaatcac 29121889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 35348288 - 35348334
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  35348288 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 35348334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 36204687 - 36204586
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||| ||||||| ||||||| ||   |||||||||| |||  ||||  |||| || ||||||||||||||||||| || |||||||||| |    
T  36204687 tttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt-acctagaatcacccc 36204589  T
Q  139 tct 141  Q
    |||    
T  36204588 tct 36204586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 56040774 - 56040728
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  56040774 gtgatttcgtcgtttaagtgcggcgttttgttgttcgtcgtcttgtg 56040728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 132
Target Start/End: Original strand, 13863164 - 13863193
Alignment:
Q  103 gtggttttaggtcattttttgacttagaat 132  Q
    ||||||||||||||||||||||||||||||    
T  13863164 gtggttttaggtcattttttgacttagaat 13863193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 27651750 - 27651847
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||||||| ||   ||||||| |||| |||||| ||| |||  |||| ||||||||||| | |||||||| |||||||| ||| ||||||    
T  27651750 tttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctaggatcacc 27651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 19853640 - 19853592
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| |||||| || |||||||||||||||| ||||    
T  19853640 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtg 19853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 52061050 - 52061006
Alignment:
Q  218 tgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgt 262  Q
    |||||||||||||||| || |||||| || |||||||||||||||    
T  52061050 tgatttcatcgtctaagtgtggcattgtgatgttcgtcgtcttgt 52061006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 56156770 - 56156722
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| || ||| || |||||||||||||||||||||    
T  56156770 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtg 56156722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 21 - 136
Target Start/End: Original strand, 48061188 - 48061303
Alignment:
Q  21 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 120  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  48061188 gtcaatgattcttttaggtttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcatttt 48061287  T
Q  121 ttgacttagaatcacc 136  Q
    ||||||||||||||||    
T  48061288 ttgacttagaatcacc 48061303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 12141625 - 12141510
Alignment:
Q  29 ttctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgactta 128  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||    
T  12141625 ttcttttaggtttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacata 12141526  T
Q  129 gaatcacctctctaca 144  Q
    |||||||| |||||||    
T  12141525 gaatcacccctctaca 12141510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 37837757 - 37837660
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  37837757 gagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 37837660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 42978400 - 42978497
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  42978400 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctaca 42978497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 8013772 - 8013667
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| |||||||||| |||||||||||||| ||| |||||| |||||||||||||||||| |||||||||||| |||||||||| |    
T  8013772 tttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccc 8013673  T
Q  139 tctaca 144  Q
    ||||||    
T  8013672 tctaca 8013667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 9450436 - 9450347
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||    
T  9450436 gagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacc 9450347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 19405061 - 19404956
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||||||||||||| ||||  ||||||||||||  ||||||||| ||||||||||||||||||||||||||| |||||||||| |    
T  19405061 tttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccc 19404962  T
Q  139 tctaca 144  Q
    ||||||    
T  19404961 tctaca 19404956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 30757126 - 30757021
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | |||||||| |||||||||| |||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||||||||| |    
T  30757126 tttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccc 30757027  T
Q  139 tctaca 144  Q
    ||||||    
T  30757026 tctaca 30757021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 19296662 - 19296767
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | |||||||||||||||| || |||  ||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  19296662 tttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 19296761  T
Q  139 tctaca 144  Q
    ||||||    
T  19296762 tctaca 19296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 39171891 - 39171794
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||| |||||||||| | ||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| |||||||||| |||||||    
T  39171891 gagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctaca 39171794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 34899911 - 34899809
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||  || ||   ||||||||||||||||||||||| |||||||||| |    
T  34899911 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcaccgatga---gtggttttaggtcattttttgacctagaatcacccc 34899815  T
Q  139 tctaca 144  Q
    ||||||    
T  34899814 tctaca 34899809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 48317108 - 48317014
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||| ||||||||| |||| || |||||||||||||||||  |||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctaca 48317014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 13797230 - 13797133
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||||| |||| |||||||||| ||||||||| ||||| || ||||||||||||||||||| || |||||||||| |||||||    
T  13797230 gagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctctaca 13797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 47590098 - 47590202
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||| ||||||||| ||||||||||| |||||||||| |||||||  |||||||||| |    
T  47590098 tttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtca-tttttgaactagaatcacccc 47590196  T
Q  139 tctaca 144  Q
    ||||||    
T  47590197 tctaca 47590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 24770055 - 24770134
Alignment:
Q  55 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||  |||||| |||||||||||||| |||||||||||||    
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatca 24770134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 40992976 - 40993070
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||  |||| |||||||||| |||||  ||| |||||||||||||||||||| || ||||||  |||||||    
T  40992976 gagaaactccaacttctctctaaactttagttcttcttcgttcatcgagga-tggtagttttaggtcattttttgacctaaaatcactcctctaca 40993070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 5078700 - 5078598
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| |||||||||| |||  | ||||| || |||  ||||| |||| ||||| ||||||||||||||||||| |||||||||| |    
T  5078700 tttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaatcacccc 5078601  T
Q  139 tct 141  Q
    |||    
T  5078600 tct 5078598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 45350491 - 45350433
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtg 105  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||    
T  45350491 gagagaaacttcaacttctctctaaactttttttctccttcgttcatagaggaggggtg 45350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 38798584 - 38798668
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||| | | ||||||||||||| |||||||||    ||||| ||||||||||||||| |||||| ||||||||||    
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcat---cgagggatggttttaggtcattctttgacatagaatcacc 38798668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 39329092 - 39329017
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||| ||||| | | |||||||||||||||||| |||||| ||||||| |||| |||||||| ||||||    
T  39329092 gagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttt 39329017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9915941 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9916011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||||||||  ||||||||||||||||||||| || |||||||| |  ||||||||| ||||||    
T  9923853 aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt 9923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 25287488 - 25287402
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||| ||||||||||  |||||||||||||| |||||||||||||| ||| | || ||| |||||||||| || ||| ||||||    
T  25287488 tttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttgac 25287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 35132757 - 35132840
Alignment:
Q  61 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||| |||||||    
T  35132757 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctaca 35132840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 48061385 - 48061428
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtctt 260  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  48061385 gtgatttcgtcgtctaagtgcggcattttgttgttcgtcgtctt 48061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 8001674 - 8001628
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  8001674 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 8001628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 22087123 - 22087197
Alignment:
Q  61 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||| |||  |||||||||||||| || || || ||||| ||||||| |||||||||||||| |||||||||    
T  22087123 cttctctctaagttttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaatcac 22087197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 24351150 - 24351053
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||||||||||   ||||||| |||  |||||| |||  ||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  24351150 tttttagtgagagaaactctgtcttctctttaagttttcttcctctctcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 24351053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 3224730 - 3224642
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    ||||| ||||||| |||||||| |||||||| | | |||| |||||||||| |||  || | || || |||||||||||||||||||||    
T  3224730 cttagttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt 3224642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 4529871 - 4529955
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaa 131  Q
    |||||||||| || ||||||| |||   ||||||||||||| |||||  | ||| |||| ||||||||||||||||||| |||||    
T  4529871 gagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttgacatagaa 4529955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 38051336 - 38051276
Alignment:
Q  76 tctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||  ||||| |||||||||||||||||||||| |||| || ||||||||||    
T  38051336 tctttcttcttcactcattaaggaggggtggttttaggtcatattttaacctagaatcacc 38051276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 1749426 - 1749351
Alignment:
Q  61 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| ||||||||||    
T  1749426 cttctctctaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcacc 1749351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 45350051 - 45350012
Alignment:
Q  97 ggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  45350051 ggagggttggttttaggtcattttttgacctagaatcacc 45350012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 12141436 - 12141390
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| |||||||||| |||||||||||    
T  12141436 gtgatttcgtcgtctaagtgcggcgttttgttgtttgtcgtcttgtg 12141390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 19296833 - 19296879
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  19296833 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 19296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 30756947 - 30756901
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  30756947 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 30756901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 34899735 - 34899689
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  34899735 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 34899689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 37837586 - 37837540
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||| ||||| |||||| || |||||||||||||||||||    
T  37837586 gtgatttcatcatctaagtgcggcgttgtgttgttcgtcgtcttgtg 37837540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 42978573 - 42978619
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  42978573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 42978619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 5348890 - 5348794
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| || ||||||| || ||||| | |||  |||||||||||||  ||||| |||||| ||| ||||||||| | |||||||| ||||||||||    
T  5348890 tttttagtgaaagaaacttcatcttctttttaagttttctttctcctttattcatcgaggagaggt-gttttaggtaagtttttgacctagaatcacc 5348794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 26623918 - 26623873
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgt 262  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||    
T  26623918 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgt 26623873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 28476063 - 28476104
Alignment:
Q  95 gaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  28476063 gaggaggggtgattttaggtcaatttttgacctagaatcacc 28476104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 3394434 - 3394482
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    ||||||||||||||| | |||||  || |||||||||||||||||||||    
T  3394434 gtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtg 3394482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 24350709 - 24350741
Alignment:
Q  39 tttttagagagagaaactccaacttctctataa 71  Q
    ||||||| |||||||||||||||||||||||||    
T  24350709 tttttagtgagagaaactccaacttctctataa 24350741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 39228862 - 39228898
Alignment:
Q  102 ggtggttttaggtcattttttgacttagaatcacctc 138  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  39228862 ggtgattttaggtcattttttgacctagaatcacctc 39228898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 2297 - 2174
Alignment:
Q  21 gtcaatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||| ||||||||    
T  2297 gtcaatgattctcttaggtttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcatttt 2198  T
Q  121 ttgacttagaatcacctctctaca 144  Q
    ||||  |||||||||| |||||||    
T  2197 ttgatctagaatcacccctctaca 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 2101 - 2053
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2101 gtgatttcatcgtctaagtgcggcattttgttgttcgtcgtcttatgtg 2053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 2e-43; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 29738959 - 29738838
Alignment:
Q  23 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  29738959 caatgattctcttaggtctttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttt 29738860  T
Q  123 gacttagaatcacctctctaca 144  Q
     || |||||||||| |||||||    
T  29738859 tacctagaatcacccctctaca 29738838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 5983606 - 5983717
Alignment:
Q  24 aatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttg 123  Q
    |||||||||||||| ||||||||||||||||||  ||||||||| |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||    
T  5983606 aatgattctcttagatttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttg 5983705  T
Q  124 acttagaatcac 135  Q
    || |||||||||    
T  5983706 acctagaatcac 5983717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 34878570 - 34878482
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  34878570 gagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcac 34878482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 31983965 - 31984070
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||| ||||| ||||||    
T  31983965 tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctc 31984064  T
Q  139 tctaca 144  Q
    ||||||    
T  31984065 tctaca 31984070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 45415338 - 45415449
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 132  Q
    ||||| ||| ||| |||||||||| |||||||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||  ||||||    
T  45415338 cttagttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaat 45415437  T
Q  133 cacctctctaca 144  Q
    |||| |||||||    
T  45415438 cacccctctaca 45415449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 11462763 - 11462653
Alignment:
Q  31 ctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttaga 130  Q
    |||||| || |||| ||||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| ||||    
T  11462763 ctcttatgtctttatagagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctaga 11462664  T
Q  131 atcacctctct 141  Q
    |||||| ||||    
T  11462663 atcacccctct 11462653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 35484677 - 35484599
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  35484677 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgac 35484599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 10776767 - 10776670
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||| ||||||||||    
T  10776767 tttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacc 10776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 119
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattt 119  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt 41177047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 14872418 - 14872529
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 132  Q
    ||||| ||||||| ||||||||||||||||||| | | |||||||||||| |||| ||||| ||| ||| |||||||| |||||||||||||||||||||    
T  14872418 cttagttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaat 14872517  T
Q  133 cacctctctaca 144  Q
    |||  |||||||    
T  14872518 cactcctctaca 14872529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 7337959 - 7337865
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||  |||||||||| |||||||    
T  7337959 agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgatctagaatcacccctctaca 7337865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 134
Target Start/End: Original strand, 32394818 - 32394879
Alignment:
Q  73 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatca 32394879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 39 - 135
Target Start/End: Complemental strand, 51916959 - 51916863
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||| |||||||||| ||| || ||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| || ||||||    
T  51916959 tttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcac 51916863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 7837059 - 7836976
Alignment:
Q  53 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||| ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacc 7836976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 35462351 - 35462262
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||| ||||||| | ||||||||| ||||| ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  35462351 cttagttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcatttttt 35462262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 1742060 - 1742168
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 132  Q
    ||||| ||| ||| ||||||||||| ||||||| | ||||||| ||||||| |||||||||  ||||  |||||||||||||||||||||||| ||||||    
T  1742060 cttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttgacctagaat 1742159  T
Q  133 cacctctct 141  Q
    |||| ||||    
T  1742160 cacccctct 1742168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 141
Target Start/End: Original strand, 18939109 - 18939209
Alignment:
Q  41 tttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctc 140  Q
    ||||| |||||||||| || ||||||| |||  |||||||||||||| || || |||||| |||||||||||||||||||||||  ||||||||||||||    
T  18939109 tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctc 18939208  T
Q  141 t 141  Q
    |    
T  18939209 t 18939209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15435171 - 15435074
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||||||  |||| |||||||| |||| |||||  |||||||| ||||||||||||||||||||  |||||||| | |||||||    
T  15435171 gagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctaca 15435074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 4413085 - 4413168
Alignment:
Q  35 taggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt 118  Q
    ||||| ||||||||||||||||| ||||| ||| |||||||||||||| ||||||| || ||||||| || |||||||||||||    
T  4413085 taggtctttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt 4413168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 44915449 - 44915536
Alignment:
Q  58 caacttctctataaactttctttctccttcgttcattgaggagggg-tggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| ||||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||| ||||| | |||||||    
T  44915449 caacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttggcttaaaatcatcactctaca 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 21686658 - 21686762
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| |||||| | | |||| |||||||||| ||||||||| |||||| | || ||||||||||||||||||  |||||||| |||    
T  21686658 tttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaatca-ctc 21686756  T
Q  139 tctaca 144  Q
    ||||||    
T  21686757 tctaca 21686762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 3228068 - 3228152
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||||||||  |||| ||| |||||||||| |||||  ||||||||||||||||||||||||||| || || |||||||    
T  3228068 aaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcattttttaacctacaatcacc 3228152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 45789344 - 45789452
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 132  Q
    ||||| ||||||| ||||||||||| |  |||||| |||| ||| ||||| |||| ||||| |||||  | |||||||||||||||||||||| ||||||    
T  45789344 cttagttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaat 45789443  T
Q  133 cacctctct 141  Q
    |||| ||||    
T  45789444 cacccctct 45789452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 32679406 - 32679311
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||| |||||||| |||||||| ||| |||  |||||||||| |||  || | ||||||||||||||||| ||||||||||||| ||||||||    
T  32679406 tttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttgacatagaatca 32679311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 49626703 - 49626797
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    ||||||||||||||||||||| |||   ||| ||||| |||  |||| |||||||||||||||||||||||| |||||| || ||||||| ||||    
T  49626703 gagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatcacccctct 49626797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 114
Target Start/End: Original strand, 26535179 - 26535260
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 114  Q
    ||||| ||| ||| ||||||||||| ||||||||| |||||||||| ||||||||||||||  |||| | ||||||||||||    
T  26535179 cttagttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttaggt 26535260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 36894535 - 36894443
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||| |||||||||| |||| |||||||||||   |||||| || ||||||||||| || ||||||||||||| |||| ||||| |||||||    
T  36894535 gagaaacttcaacttctctttaaattttctttctcc---gttcatcgaagaggggtggttctaagtcattttttgacctagagtcacccctctaca 36894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 21947930 - 21947843
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    ||||| ||| ||| |||||||||| ||| || ||| ||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||    
T  21947930 cttagttttctagtgagagaaacttcaatttttctctaaactttctttctc-ttcgttcatcgaggatgggtggttttaggttattttt 21947843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 23291922 - 23291852
Alignment:
Q  69 taaactttctttctccttcgttcattgaggaggggtgg---ttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||||||| ||| | ||||||   ||||||||||||||||||| ||||||||||    
T  23291922 taaactttctttctccttcgttcatcgagaaagggtggttattttaggtcattttttgacctagaatcacc 23291852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 15836001 - 15836075
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| ||||||||||    
T  15836001 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcacc 15836075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 137
Target Start/End: Original strand, 9341571 - 9341608
Alignment:
Q  100 ggggtggttttaggtcattttttgacttagaatcacct 137  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9341571 ggggtggttttaggtcattttttgacttagaatcacct 9341608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 27456325 - 27456397
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggtttta 111  Q
    ||||||| |||| ||||| |||||||| | ||||||||||||||||||| ||| | |||||||| ||||||||    
T  27456325 tttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggtttta 27456397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 50377148 - 50377207
Alignment:
Q  74 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    |||||||||||||||||||| || ||||  |||||||||||||||||||||| ||||||||    
T  50377148 tttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaatca 50377207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 8212195 - 8212112
Alignment:
Q  61 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||| |||| ||| |||||||||| |||||  |||||||||| |||||| | |||||||||  || |||||||||||||||    
T  8212195 cttctctttaaaatttttttctccttcattcatcaaggaggggtgcttttagattattttttgatctacaatcacctctctaca 8212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 134
Target Start/End: Original strand, 44543058 - 44543153
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  |||| ||||| ||||| |||||||| ||| |||||| || |||||    
T  44543058 tttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttgacctaaaatca 44543153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 5983800 - 5983846
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  5983800 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 5983846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 7337791 - 7337745
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||    
T  7337791 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 7337745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 7836924 - 7836878
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||    
T  7836924 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 7836878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 45415522 - 45415568
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  45415522 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 45415568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 261
Target Start/End: Original strand, 34528695 - 34528735
Alignment:
Q  221 tttcatcgtctaactgcggcattttgttgttcgtcgtcttg 261  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  34528695 tttcatcgtctaagtgcggcattgtgttgttcgtcgtcttg 34528735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 141
Target Start/End: Original strand, 16161640 - 16161719
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||| |||| |||||| ||| |||   ||| ||||||||||  |||||||||| |||||||| |||||||||||||||    
T  16161640 ttctctctaaattttcttcctctttcacacatcgaggaggggtaattttaggtcaatttttgacctagaatcacctctct 16161719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 1742245 - 1742291
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  1742245 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 1742291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 11462576 - 11462530
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| || ||||| | |||||||||||||||||||||||||||    
T  11462576 gtgatttcgtcatctaagtccggcattttgttgttcgtcgtcttgtg 11462530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 12634952 - 12635049
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||| ||||||||| ||   ||| |||||| |||  || | ||||| | |||||||||||||||||| |||| || |||||||    
T  12634952 tttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcattttctgacctataatcacc 12635049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 138
Target Start/End: Original strand, 31317550 - 31317635
Alignment:
Q  53 aactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    |||||||  |||||| |||| |||||||||| ||| ||||| |||| |   ||||||||||| |||| ||||| ||||||||||||    
T  31317550 aactccacattctctctaaattttctttctctttcattcatcgaggcgttatggttttaggtaatttgttgacatagaatcacctc 31317635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 19060871 - 19060919
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| |||| | || |||||||||||||||||||||    
T  19060871 gtgatttcgtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtg 19060919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 4e-41; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 6012445 - 6012340
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  6012445 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccc 6012346  T
Q  139 tctaca 144  Q
    ||||||    
T  6012345 tctaca 6012340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 13007010 - 13007115
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  13007010 tttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 13007109  T
Q  139 tctaca 144  Q
    ||||||    
T  13007110 tctaca 13007115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 38597587 - 38597684
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||| |||||||    
T  38597587 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctctaca 38597684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 38007147 - 38007244
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  38007147 gagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctaca 38007244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 144
Target Start/End: Complemental strand, 31392044 - 31391959
Alignment:
Q  59 aacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  31392044 aacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 31391959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 9114022 - 9113927
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| || |||||||||| |||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctaca 9113927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 40 - 136
Target Start/End: Original strand, 34945204 - 34945300
Alignment:
Q  40 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||||||||| || || || |||||||||||||||||||||| ||||||||||    
T  34945204 ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcacc 34945300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 25979951 - 25980025
Alignment:
Q  51 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||    
T  25979951 gaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgac 25980025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 26825220 - 26825317
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctaca 144  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||    
T  26825220 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctaca 26825317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 26878377 - 26878281
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||||| ||||||||||||||||||| ||||| |||||| |||||||||| |||| |||||||  ||||||||||||||||||    
T  26878377 gagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaatcacctctctaca 26878281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 7036017 - 7036105
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||  ||| |||||||||||||||||||||||||| || ||||||    
T  7036017 gagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcac 7036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 35850573 - 35850662
Alignment:
Q  46 agagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||| ||||| |||||| |||||||| |||||| |||||| || ||||||||||||||||||||| ||||||||| ||||||||||    
T  35850573 agagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaatcacc 35850662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 143
Target Start/End: Complemental strand, 11074199 - 11074103
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggag-gggtggttttaggtcattttttgacttagaatcacctctctac 143  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||| |||||| |||||||||||||| | |||||||| |||||||| | ||||||    
T  11074199 gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggtta-tttttgacctagaatcatcactctac 11074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 11977236 - 11977171
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 112  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  11977236 gagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag 11977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 8096792 - 8096701
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 142  Q
    ||||| |||||||||||| |||||||| ||||| ||||||| ||||||||||  |||||||||||||| ||||||| |||||||||| |||||    
T  8096792 agaaattccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcat-ttttgacctagaatcacccctcta 8096701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 134
Target Start/End: Original strand, 6216676 - 6216771
Alignment:
Q  40 ttttagagagagaaactccaa-cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    |||||| ||||||||||| || ||||||| |||||||| |||||| ||||||||| ||||| |||||||||||||||||| |||||| || |||||    
T  6216676 ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatca 6216771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 7929988 - 7930073
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||||||| |||||| ||||||||||||||||    |||||  |||||||||| |||||||||| |||||||| ||||||||||    
T  7929988 gagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaatcacc 7930073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 14082655 - 14082581
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||| |||||||||||| ||||||| |||| ||||||  ||||||||| ||||||||||||||| ||||||||    
T  14082655 ttctctctaaactttctttatccttcgctcatcgaggagaagtggttttatgtcattttttgactttgaatcacc 14082581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 112  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||||||| ||||||    
T  4770927 gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 13421733 - 13421821
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||| |||||||||| |||||||||||||| |||| |||| |||| | |  || ||||||||||||||||||| ||||||||||    
T  13421733 gagagaaacttcaacttctctttaaactttctttcttcttcattca-tgagtatgaatgattttaggtcattttttgacatagaatcacc 13421821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 15571275 - 15571363
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatca 134  Q
    ||||||||||| |||||||||  || ||||||||||||||| ||||| ||||||   |||||||| |||| ||||||||| ||||||||    
T  15571275 gagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttttgacctagaatca 15571363  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 24230086 - 24230018
Alignment:
Q  47 gagagaaactccaacttctctataaa-ctttctttctccttcgttcattgaggaggggtggttttaggt 114  Q
    ||||||||||||||||||||| |||| |||||||| | |||||||||| |||||| || ||||||||||    
T  24230086 gagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggt 24230018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 135
Target Start/End: Original strand, 39567077 - 39567173
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||| ||||||||| ||  ||||||| |||  |||||| ||| |||  |||| ||||||||||| |||||||||| |||||||| |||||||||    
T  39567077 tttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaatcac 39567173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 24229912 - 24229863
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtga 266  Q
    |||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  24229912 gtgatttcgtcatctaagtgcggcgttttgttgttcgtcgtcttgtgtga 24229863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 8985244 - 8985169
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 114  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || || |||||||||| ||||||||    
T  8985244 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtttaggaggggtgattttaggt 8985169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 6012266 - 6012220
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||  || |||||||||||||||||||    
T  6012266 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtg 6012220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 6216859 - 6216905
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  6216859 gtgatttcgtcgtctaaatgcggcgttatgttgttcgtcgtcttgtg 6216905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 9113853 - 9113807
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  9113853 gtgatttcgtcgtctaagtgcggcgttctgttgttcgtcgtcttgtg 9113807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 13007189 - 13007235
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  13007189 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 13007235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 14211015 - 14211116
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| ||||| ||||| |||||||||| |||||||| |||||||||| |    
T  14211015 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgagga-gggtgattttaggtcaatttttgacctagaatcacccc 14211113  T
Q  139 tct 141  Q
    |||    
T  14211114 tct 14211116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 38597757 - 38597803
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  38597757 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 38597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 14082501 - 14082456
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgt 262  Q
    ||||||||||||||||| || ||| || ||||||||||||||||||    
T  14082501 gtgatttcatcgtctaagtgtggcgttgtgttgttcgtcgtcttgt 14082456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 10722604 - 10722652
Alignment:
Q  89 ttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacc 136  Q
    ||||| |||||| ||||||||||||||| ||||||||| ||||||||||    
T  10722604 ttcatcgaggagaggtggttttaggtcatttttttgacctagaatcacc 10722652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 31013868 - 31013771
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  31013868 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 31013771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 17693924 - 17693814
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaat 132  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  17693924 cttagttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcat-ttttgacctagaat 17693826  T
Q  133 cacctctctaca 144  Q
    || | |||||||    
T  17693825 catccctctaca 17693814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 23230414 - 23230532
Alignment:
Q  25 atgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 124  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||||    
T  23230414 atgattctcttaggtctttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttga 23230512  T
Q  125 cttagaatcacctctctaca 144  Q
    |  | ||||||| |||||||    
T  23230513 ccaaaaatcacccctctaca 23230532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 10377491 - 10377573
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaa 131  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  10377491 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa 10377573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 25191371 - 25191274
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||||||||    
T  25191371 tttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacc 25191274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 45446108 - 45446011
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||| |||||||| |||||||||    
T  45446108 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctctctaca 45446011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 7677577 - 7677480
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||| |||||| || |||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7677577 gagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 7677480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 29937907 - 29938003
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||| |||||||||| |||||||    
T  29937907 gagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatca-tttttgacctagaatcacccctctaca 29938003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 20553542 - 20553453
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||| |||||||| ||| ||||||||||    
T  20553542 gagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcacc 20553453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 20560041 - 20559944
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||    
T  20560041 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca 20559944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 20571603 - 20571506
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||||||||| |||||||| ||||| |||||||||| || ||||||||||||||| |||||||| ||| |||||||||| |||||||    
T  20571603 gagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca 20571506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 27110761 - 27110684
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 124  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||| || || ||||||||||||||||||||||||    
T  27110761 gagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttga 27110684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 33 - 144
Target Start/End: Complemental strand, 40211617 - 40211505
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaa 131  Q
    ||||| ||| ||| |||||||||||||| |||||| |||| ||||||||||||||||| || |||||||||||| ||||||| | ||||||||| |||||    
T  40211617 cttagttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaa 40211518  T
Q  132 tcacctctctaca 144  Q
    ||||| |||||||    
T  40211517 tcacccctctaca 40211505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 8412646 - 8412571
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||| ||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  8412646 gagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt 8412571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 37971087 - 37971181
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||||   |||||||||||||||||||||| |||||||||| |||||||    
T  37971087 gagagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag---tggttttaggtcattttttgacctagaatcacccctctaca 37971181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 33214928 - 33214840
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtc-attttttgacttagaatca 134  Q
    |||| ||||| ||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||    
T  33214928 gagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttttgacttagaatca 33214840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 1236998 - 1236912
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||| |||| ||||||||||||||||||||||||||||| ||||||    
T  1236998 tttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttgac 1236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 8980981 - 8981078
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||||||||||||||||||||||||||||||| || |||||||    
T  8980981 tttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacc 8981078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 3673241 - 3673334
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||| || ||||| ||||||||||||| |||||||| |||||||| | |||||||    
T  3673241 agaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtca-tttttgacctagaatcatccctctaca 3673334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 15344089 - 15344176
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15344089 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15344176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 15433154 - 15433241
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15433154 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 15524458 - 15524545
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    |||||||| ||||||||||||||||||||| |||  |||  ||||| |||  |||| |||||||||||||||||||||||| ||||||    
T  15524458 gtttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgac 15524545  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 7883544 - 7883463
Alignment:
Q  40 ttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    |||||| |||||||||| |||||||| | |||| |||||||||| ||||||||| || || | |||||||||||||||||||    
T  7883544 ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcattttt 7883463  T

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Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 28897503 - 28897600
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||| | |||||| || |||| |||| ||| | ||||||||||||||||| ||||||||||||  || ||||||| |||||||    
T  28897503 gagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctaca 28897600  T

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Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 1239700 - 1239606
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||||| |||||||||| |||  |||| ||||| | || |||| ||||||||||||||||||||| || |||||| || ||||||| ||||    
T  1239700 gagagaaacttcaacttctctctaagttttccttctcttccgctcatcgaggaggggtggttttaggtccttctttgacctaaaatcacccctct 1239606  T

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Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 8443814 - 8443729
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||| ||||| |||| | |||| |||||||||| ||| |||||  || |||||||||||||||||||||||| |||||||||||||    
T  8443814 agaaattccaatttctttttaaattttctttctctttcattcatcaag-aggggtggttttaggtcattttttaacttagaatcacc 8443729  T

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Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 14545198 - 14545102
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca-cctctctaca 144  Q
    ||||||||||||||||||| ||||     |||||||||| ||| || |||| | ||||||||||||||||||||||| || ||||| ||||||||||    
T  14545198 gagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttgacctaaaatcaccctctctaca 14545102  T

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Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 27498632 - 27498565
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 114  Q
    |||||||||| |||||| ||| ||| ||||||||||||||| ||||| || |||||| ||||||||||    
T  27498632 gagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt 27498565  T

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Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 7677409 - 7677363
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||    
T  7677409 gtgatttcatcgtctaattgcggcgttgtgttgttcgtcgtcttgtg 7677363  T

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Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 37971246 - 37971292
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  37971246 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 37971292  T

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Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 40619199 - 40619150
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtga 266  Q
    ||||||||||||||||| |||||| || ||||||| ||||||||||||||    
T  40619199 gtgatttcatcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtga 40619150  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 122
Target Start/End: Complemental strand, 36948742 - 36948658
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcatt-gaggaggggtggttttaggtcatttttt 122  Q
    ||||||| |||| ||||| |||||||||| ||||||||||||||||||  ||||||  ||  ||||| |||||||||| ||||||    
T  36948742 tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcattatagagggggtagttttaggtcgtttttt 36948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 20553367 - 20553324
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtctt 260  Q
    |||||||| |||||||| |||||| |||||||||||||||||||    
T  20553367 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtctt 20553324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 142
Target Start/End: Original strand, 41684225 - 41684320
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 142  Q
    |||||||||||||||||| || ||  ||||||||||||||| |||||  |||    |||||||||||||| ||||| || || ||||||| |||||    
T  41684225 gagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagtttttaacctaaaatcacccctcta 41684320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 8826043 - 8826089
Alignment:
Q  90 tcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||| ||||| ||||||||||||||||||||||||  ||||||||||    
T  8826043 tcatcgaggatgggtggttttaggtcattttttgatctagaatcacc 8826089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 23230606 - 23230652
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||||    
T  23230606 gtgatttcgtcgtctaagtgcggcgatttgttgttcgtcgtcttgtg 23230652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 24099565 - 24099465
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| |||||||||| ||   |||||||||| |||  |||| ||| |||| ||| |||||||||| ||||||| |||||||||| |    
T  24099565 tttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtaggg-tggctttaggtcat-ttttgacctagaatcacccc 24099468  T
Q  139 tct 141  Q
    |||    
T  24099467 tct 24099465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 14916385 - 14916345
Alignment:
Q  95 gaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  14916385 gaggaggggtggttttaggtcat-ttttgacctagaatcacc 14916345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 29617762 - 29617665
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||||||| | |||||||||| |||| ||| |||||| |||  | || || |||  || |||||||||||||||||||| || |||||||    
T  29617762 tttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttgacctacaatcacc 29617665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 3240194 - 3240242
Alignment:
Q  74 tttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||| | || || ||||||||||||| ||||||||||||||||    
T  3240194 tttctttctcttccggtcgttgaggaggggtgattttaggtcatttttt 3240242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 7646274 - 7646369
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  7646274 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 7646369  T

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Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 4778545 - 4778650
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| | ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |    
T  4778545 tttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccc 4778644  T
Q  139 tctaca 144  Q
    ||||||    
T  4778645 tctaca 4778650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 5428188 - 5428084
Alignment:
Q  26 tgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgac 125  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||| | ||||||||    
T  5428188 tgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgac 5428089  T
Q  126 ttaga 130  Q
     ||||    
T  5428088 ctaga 5428084  T

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Target: chr2; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 7678177 - 7678080
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||| |||||||||| |||||||    
T  7678177 gagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctaca 7678080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 43397418 - 43397321
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||| | |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43397418 gagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctctctaca 43397321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 7448050 - 7448145
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | |||||||||| |||||||    
T  7448050 gagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctaca 7448145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 27097701 - 27097615
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcacc 27097615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 1421456 - 1421569
Alignment:
Q  32 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttaga 130  Q
    |||||| ||| ||| ||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||||    
T  1421456 tcttagttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatataga 1421555  T
Q  131 atcacctctctaca 144  Q
    |||||| |||||||    
T  1421556 atcacccctctaca 1421569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 12677595 - 12677498
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||| |||| ||||||||||||||| |||||||||| |||||||    
T  12677595 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgacctagaatcacccctctaca 12677498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 36943423 - 36943326
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||| || ||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  36943423 gagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctaca 36943326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 31788256 - 31788353
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||| |||||| || |||||||||| |||||||||| |||||||||| |||||||    
T  31788256 gagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctctaca 31788353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 9169554 - 9169460
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||| |||||||||| |||||||    
T  9169554 gagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctaca 9169460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 37876899 - 37876808
Alignment:
Q  45 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||| |||||||| ||||||||||    
T  37876899 gagagggaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacc 37876808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 4098895 - 4098992
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| | ||||||||||||||||||| ||||||||||||||| ||| ||||| ||||| |||||| |||||||||||||||||| ||||||||||    
T  4098895 tttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcacc 4098992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 18763268 - 18763365
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||| ||||| | ||| |||||| |||||||||| ||||||||||||| |||||||||| |||||||    
T  18763268 gagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctaca 18763365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 11985529 - 11985432
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||| | |||||| |||||||||| |||||||||| || |||||||||| |||||||    
T  11985529 gagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaatcacccctctaca 11985432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 31129060 - 31128974
Alignment:
Q  34 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 120  Q
    |||| ||||||| |||| ||||| |||||||||| |||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  31129060 ttagttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt 31128974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 4904443 - 4904346
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||  ||||||||| |||||||||| ||||||||||||||| |||||| ||||| ||| |||||||||| ||||||||||||| || |||||||    
T  4904443 tttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcacc 4904346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 12648223 - 12648134
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||| |||  |||||||||| ||   || ||||||||||||||||||||||||||||||||| ||||||||||    
T  12648223 gagagaaactccaacttctctttaagttttctttctcttttactcgttgaggaggggtggttttaggtcattttttgacctagaatcacc 12648134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 35220131 - 35220222
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |||||    ||||||||||||||||| |||||||||| |||||||||| ||||    
T  35220131 gagagaaactccaacctctctctaaactttctttctccttcattcat---cgaggggtggttttaggttattttttgacctagaatcacccctct 35220222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 18108034 - 18107943
Alignment:
Q  48 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctct 139  Q
    ||||||| ||||  |||||| |||  |||||||||| ||| |||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  18108034 agagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaatcacctct 18107943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 38444982 - 38445063
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||||| |||||||  |||||||||| |||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctaca 38445063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 24461243 - 24461327
Alignment:
Q  51 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||||||||||||| |||  |||  ||||| |||  ||||| |||||||||||||||||||||||||||||| |||||||||    
T  24461243 gaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaatcac 24461327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 17995012 - 17994921
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    ||||||| || ||||||| ||||||||||||||| |||| || | || ||| |||||||||||||||||||||| | || ||||||||||||    
T  17995012 agaaacttcatcttctctctaaactttctttctcattcggtcgtcgaagagaggtggttttaggtcattttttgccctaaaatcacctctct 17994921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 32448928 - 32448826
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||| ||||||||| |||| |||  || || |||  |||| |||||||||||||||||||||||| |||||| || ||||||| |    
T  32448928 tttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttgacctaaaatcacccc 32448829  T
Q  139 tct 141  Q
    |||    
T  32448828 tct 32448826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 8809084 - 8809178
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||||||| ||||||||||||||||||| | | | |||||  ||||||||||| ||| |||||||| || ||||||| |||||||    
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatca-tttttgacctaaaatcacccctctaca 8809178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 112
Target Start/End: Original strand, 36691666 - 36691732
Alignment:
Q  47 gagagaaactccaactt-ctctataaactttctttctccttcgttcattgaggaggggtggttttag 112  Q
    ||||||||||||||||| || | ||||| ||||||||||||| || |||||||||||||||||||||    
T  36691666 gagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag 36691732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 123
Target Start/End: Complemental strand, 29279869 - 29279794
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttg 123  Q
    ||||||||||||||||||||| ||| |||||||||| |||| ||||| ||||| | | | |||||||||||||||||    
T  29279869 gagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttg 29279794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 42698982 - 42698922
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgagga 99  Q
    ||||||| |||||||||| |||||||| | ||||||||||||||||||  |||||||||||    
T  42698982 tttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcattgagga 42698922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 29574938 - 29574843
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||| ||||||| ||  |  ||| |||||| |||  || | |||||||||||||||||| |||||||||||| ||||||||||    
T  29574938 tttttagtgagagaaactctaacttcttta--agttttatttctctttcactcgtcgaggaggggtggttttagatcattttttgacctagaatcacc 29574843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 141
Target Start/End: Original strand, 37994084 - 37994168
Alignment:
Q  56 tccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||||||| ||   |||||||||| |||  |||| ||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  37994084 tccaacttctctctaggttttctttctctttcaatcatcgaggaagggtggttttaggtca-tttttgacctagaatcacccctct 37994168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 5427997 - 5427949
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| ||||| || |||||| ||||||||||||||||||||||||    
T  5427997 gtgatttcgtcgtccaagtgcggcgttttgttgttcgtcgtcttgtgtg 5427949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 37416488 - 37416576
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    ||||| ||||||  |||||||||| |||||||||| |||| ||| ||| || ||| ||| | || |||||||| |||||||||||||||    
T  37416488 cttagttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt 37416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 41694406 - 41694502
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||  ||||||||| || ||||||| ||| |||||| ||||||||  |||| ||| ||  || ||||||||||||||||||| ||| |||||    
T  41694406 gtttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgatttaaaatca 41694502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 4042276 - 4042229
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcatt 94  Q
    ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  4042276 gagagaaactccaacttctctctaaactttttttctcattccttcatt 4042229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 141
Target Start/End: Original strand, 6436459 - 6436502
Alignment:
Q  98 gaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||    
T  6436459 gaggggtgattttaggtcattttttgacatagaatcacccctct 6436502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 122
Target Start/End: Complemental strand, 25509342 - 25509291
Alignment:
Q  71 aactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||| |||||||||| |||||  |||||||||||||| ||||||    
T  25509342 aactttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt 25509291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 28718245 - 28718160
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    |||||||||||||||| |||| |||  ||||||| || ||   |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  28718245 gagagaaactccaact-ctctttaagttttctttatctttaactcattgagaaggggtggttttaggtcat-ttttgacatagaatca 28718160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 39311145 - 39311059
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||| |||||  || ||| |||||||||| |||| ||||| ||| | || || ||||||||||||||||||| ||||||||||    
T  39311145 gagaaactcgaactttgctctaagctttctttcttcttcattcatcgagaatgg-tgattttaggtcattttttgacctagaatcacc 39311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 7646444 - 7646490
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  7646444 gtgatttcgtcgtctaagtgcggcgttatgttgttcgtcgtcttgtg 7646490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 7678002 - 7677956
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  7678002 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 7677956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 12648052 - 12648006
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||  || |||||||||||||||||||    
T  12648052 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtg 12648006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 18763439 - 18763485
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||||| |||||  || |||||||||||||||||||    
T  18763439 gtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtg 18763485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 28872074 - 28871987
Alignment:
Q  33 cttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||| ||||||| |||||||||||||  |||||| |||  ||| |||||| ||| ||||| ||||| | ||||||||||||| ||||||    
T  28872074 cttagttttttagtgagagaaactccacattctctctaa--tttttttctcattcattcatcgaggatgagtggttttaggtcttttttt 28871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 36943250 - 36943204
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  36943250 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 36943204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 37876735 - 37876689
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||  |||||||| |||||| ||||||||||||||||||||||    
T  37876735 gtgatttggtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 37876689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 3308787 - 3308828
Alignment:
Q  95 gaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||| |||||||||| |||||||| ||||||||||    
T  3308787 gaggaggggtgattttaggtcaatttttgacctagaatcacc 3308828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 80
Target Start/End: Original strand, 8809003 - 8809036
Alignment:
Q  47 gagagaaactccaacttctctataaactttcttt 80  Q
    ||||||||||||||||||||| ||||||||||||    
T  8809003 gagagaaactccaacttctctctaaactttcttt 8809036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 11833338 - 11833371
Alignment:
Q  101 gggtggttttaggtcattttttgacttagaatca 134  Q
    |||||||||||||||||||||||||||| |||||    
T  11833338 gggtggttttaggtcattttttgacttaaaatca 11833371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 13120022 - 13120083
Alignment:
Q  61 cttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||| ||||||| |||| ||||| || || |||||||||||| || ||||||    
T  13120022 cttctctataaactctctttcttcttcattcatcgaagaagggtggttttagatcttttttt 13120083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 136
Target Start/End: Complemental strand, 20146011 - 20145914
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| |||||||||| ||  |||||| |||  | ||||||| ||||  ||||  ||||||||  |||||||||||||| ||||| ||||||||||    
T  20146011 tttttagtgagagaaacttcacattctctttaagttatctttcttcttcactcatcaaggaggggcagttttaggtcatttattgacatagaatcacc 20145914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 27097534 - 27097489
Alignment:
Q  218 tgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||| |||||||| |||||| || |||||||||||||||||||    
T  27097534 tgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 27097489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 30400307 - 30400250
Alignment:
Q  78 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    |||||||||| ||||| ||| || ||||||||||| |||||||||||| || ||||||    
T  30400307 tttctccttcattcatcgagaagaggtggttttagatcattttttgacctaaaatcac 30400250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 19062609 - 19062554
Alignment:
Q  88 gttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||| |||||||| ||||||||||| |||||||||  |||||||||| |||||||    
T  19062609 gttcatcgaggaggg-tggttttaggttattttttgaactagaatcacccctctaca 19062554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 43397248 - 43397200
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| || ||| || |||||||||||||||||||||    
T  43397248 gtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtg 43397200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 12170286 - 12170383
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  12170286 gagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 12170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 33053465 - 33053370
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||||||    
T  33053465 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctctaca 33053370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 7515521 - 7515403
Alignment:
Q  27 gattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgac 125  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||| | | |||||||||    
T  7515521 gattctcttaggtttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgac 7515422  T
Q  126 ttagaatcacctctctaca 144  Q
     |||||||||| |||||||    
T  7515421 ctagaatcacccctctaca 7515403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 23128411 - 23128506
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||    
T  23128411 gagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctaca 23128506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 3913872 - 3913784
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||    
T  3913872 gagagaaactccaacttctctctaaactttctttctcctttgttcatcgagga-gggtggttttaggtcattttttgacctagaatcacc 3913784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 605997 - 606092
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| ||| |||||| |||||||    
T  605997 gagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctctaca 606092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 29320153 - 29320064
Alignment:
Q  55 ctccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||| |||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctaca 29320064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 30894428 - 30894524
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||||| |||||||| ||||||||||||| || |||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  30894428 gagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctaca 30894524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 68297 - 68211
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| | |||||||| ||||||||||    
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggt-aatttttgacctagaatcacc 68211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 32328882 - 32328793
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||| |||| |||||||| || |||||||    
T  32328882 gagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcacc 32328793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 69 - 144
Target Start/End: Original strand, 34018373 - 34018448
Alignment:
Q  69 taaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||| |||||||||| |||||||    
T  34018373 taaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctaca 34018448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 9723675 - 9723602
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcat-tgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||||| ||||||    
T  9723675 agaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt 9723602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 4010807 - 4010705
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||| || ||||||| |||  |||||||||||||  || |||||||||| |||  ||||| |||||||||||| |||||||||| |    
T  4010807 tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaatcacccc 4010708  T
Q  139 tct 141  Q
    |||    
T  4010707 tct 4010705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 9719691 - 9719613
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcat-tgagga--ggggtggttttaggtcatttttt 122  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||  |||||  ||||| ||||||||||| |||||    
T  9719691 gagagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggggtagttttaggtcaattttt 9719613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 9721809 - 9721763
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcat 93  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  9721809 gagagaaactccaacttctctctaaactttctttctcgttcgttcat 9721763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 29255741 - 29255664
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 124  Q
    |||||||| ||||||||||||  ||||| |||||||||||||||||| || |||  ||||||||| |||||| |||||    
T  29255741 gagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttga 29255664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 23128580 - 23128628
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  23128580 gtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtg 23128628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 127468 - 127534
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggt 114  Q
    ||||||||  ||||||||||| ||||| || |||||| ||||||||||||||| ||||||||||||||    
T  127468 gagagaaatcccaacttctctctaaacgttttttctctttcgttcattgagga-gggtggttttaggt 127534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 30493317 - 30493413
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||| ||||||||||||||| ||||| |||  ||||||| || |||  || | || || |||||||||| |||||||||||||| ||||||||||    
T  30493317 tttttagtgagagaaactccaacctctctttaagttttctttttctttcactcgtcgaaga-gggtggttttcggtcattttttgacctagaatcacc 30493413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 30608811 - 30608715
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||| | ||| | | |||| ||| |||||||||| | |||| |||| || |||||||||||||| ||||||| |||||||||| |||||||    
T  30608811 gagagaaactcaaccttttgtttaaattttttttctccttcatccattaaggatggatggttttaggtcat-ttttgacctagaatcacccctctaca 30608715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 32192038 - 32191954
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 124  Q
    ||||||||||||||||||| || || | | |||  |||||||||| ||| |||||  |||||||||||||||||||| ||||||||    
T  32192038 tttttagagagagaaactctaattt-tgtctaagttttctttctctttcattcatcaaggaggggtggttttaggtccttttttga 32191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 7515330 - 7515286
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttg 261  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||    
T  7515330 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttg 7515286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 24228007 - 24227936
Alignment:
Q  51 gaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||||| |||  || |||| ||||| |||| |||||  |||||| ||||||||||||||||||||    
T  24228007 gaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttt 24227936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 27097924 - 27097834
Alignment:
Q  32 tcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||| ||||||| |||||||||| ||  |||||| |||  |||||||||| |||  ||||| |||| | ||||||||||||| ||||||    
T  27097924 tcttagttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt 27097834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 32327345 - 32327299
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||||| |||||| |||||| || |||||||||||||||||||    
T  32327345 gtgatttcatagtctaagtgcggcgttgtgttgttcgtcgtcttgtg 32327299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 33053296 - 33053250
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  33053296 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 33053250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 127632 - 127681
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtga 266  Q
    |||||||| |||||||| ||| || || ||||||||||||||||||||||    
T  127632 gtgatttcgtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgtga 127681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 3355080 - 3355128
Alignment:
Q  218 tgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtga 266  Q
    |||||||||||||||| |||||  || ||||||||||| ||||||||||    
T  3355080 tgatttcatcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtga 3355128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 144
Target Start/End: Complemental strand, 12050971 - 12050850
Alignment:
Q  23 caatgattctcttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||  |||| | ||||||||| || |||||||    
T  12050971 caatgattctcttaggtctttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttatttttt 12050872  T
Q  123 gacttagaatcacctctctaca 144  Q
    || ||||||||||| |||||||    
T  12050871 gatttagaatcacccctctaca 12050850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 10232862 - 10232957
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| |||||||    
T  10232862 gagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 10232957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 6954992 - 6954898
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctaca 6954898  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 47895941 - 47896038
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||| |||||||||| |||||||    
T  47895941 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctctaca 47896038  T

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Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 9998258 - 9998354
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca-ttttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  9998258 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctctaca 9998354  T

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Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 40487115 - 40487203
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||    
T  40487115 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcac 40487203  T

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Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 38545625 - 38545712
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  38545625 gagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatca 38545712  T

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Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 32701291 - 32701385
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| | |||||||    
T  32701291 agaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctctaca 32701385  T

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Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 45568743 - 45568666
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga 124  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45568743 gagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga 45568666  T

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Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 21431417 - 21431511
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||| |||||||    
T  21431417 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtca-tttttgacctaaaatcacccctctaca 21431511  T

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Target: chr3; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 136
Target Start/End: Original strand, 40556503 - 40556590
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    ||||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  40556503 gagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacc 40556590  T

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Target: chr3; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 48651031 - 48650945
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  48651031 agaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacc 48650945  T

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Target: chr3; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 10108030 - 10108123
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||  ||||||| |||||||||| |||||||    
T  10108030 gagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtca--ttttgacctagaatcacccctctaca 10108123  T

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Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 9797826 - 9797732
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| |||||||||| |||||||    
T  9797826 gagagaaactccaacttctctctaaactttatttctccttcgttcatt---gagaggtggttttaggtcattttttgacctagaatcacccctctaca 9797732  T

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Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 47042348 - 47042254
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||| |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||||||    
T  47042348 agaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctctaca 47042254  T

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Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 52923411 - 52923318
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||| |||||||||| |||||||    
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtca-tttttgacctagaatcacccctctaca 52923318  T

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Target: chr3; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 33579658 - 33579755
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||| || || ||||||||||| ||||||||||||| |||||||||| |||||||    
T  33579658 gagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctaca 33579755  T

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Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 144
Target Start/End: Complemental strand, 21534120 - 21534012
Alignment:
Q  34 ttaggtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 133  Q
    |||| ||||||| ||||||||||| || |||||| |||||||||||||||||||||| || ||||| |||||||||||||||  |||||||| |||||||    
T  21534120 ttagttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatc 21534023  T
Q  134 acctctctaca 144  Q
    ||| |||||||    
T  21534022 acccctctaca 21534012  T

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Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 10229266 - 10229363
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt--gacttagaatcacctctctaca 144  Q
    |||||||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||| |||||||||| |||||||    
T  10229266 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctaca 10229363  T

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Target: chr3; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 35865232 - 35865158
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  35865232 gagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcattttt 35865158  T

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Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 7449200 - 7449115
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 133  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  7449200 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatc 7449115  T

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Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 7457342 - 7457257
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatc 133  Q
    |||||||||||||||||||||  ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  7457342 gagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatc 7457257  T

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Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 54148793 - 54148875
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||| |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| || ||||||| |||||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctaca 54148875  T

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Target: chr3; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 26276092 - 26276005
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||||| || |||||| ||||||||||||||||||  |||||||||||| ||||||||||||| |||||||||| || |||||    
T  26276092 gagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttgacctaaaatca 26276005  T

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Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 49 - 144
Target Start/End: Complemental strand, 36461728 - 36461633
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||| ||  |||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | ||||| |||||||    
T  36461728 gagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgacctatattcacccctctaca 36461633  T

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Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 12150089 - 12149984
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  12150089 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 12149990  T
Q  139 tctaca 144  Q
    ||||||    
T  12149989 tctaca 12149984  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 43016645 - 43016736
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtca--ttttttgacttagaatcacc 136  Q
    ||||||||||| ||||||||| |||| |||||||||| ||||||||| ||||| ||||||||||||||||  | ||||||| ||||||||||    
T  43016645 gagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcacc 43016736  T

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Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 31272106 - 31272018
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggg-gtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||||||||||||||| |||  ||||||| |||||||||||| |||||||| ||| |||||||| ||||||| || ||||||||    
T  31272106 gagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaatca 31272018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 50194590 - 50194488
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||  || | ||| ||| |||||||||| |||||||||||| || |||||||||    
T  50194590 tttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcattttttgacctaaaatcacctc 50194491  T
Q  139 tct 141  Q
    |||    
T  50194490 tct 50194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 43488904 - 43488792
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcat--------tgaggaggggtggttttaggtcattttttgacttaga 130  Q
    ||||||| |||||||||| |||||||||| ||||||||||||||||||| |||||         |||| ||||||| |||||||| ||||||||| ||||    
T  43488904 tttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgggggggggagggggggtgggtttaggtc-ttttttgacctaga 43488806  T
Q  131 atcacctctctaca 144  Q
    |||||| |||||||    
T  43488805 atcacccctctaca 43488792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 134
Target Start/End: Complemental strand, 629213 - 629118
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||| ||||||||||| ||||||||| |||  |||| ||| | |||  |||| |||||||||||||||||||||||| |||||| || |||||    
T  629213 tttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaatca 629118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 953706 - 953631
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||  |||||| |||  |||||||||||||| ||||||||||||  ||||||||||||| ||||||    
T  953706 gagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt 953631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 36910954 - 36910879
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||||||||||||||||||||||||||||| |||||  | ||||||| |||||| ||| ||||| |||| ||||||    
T  36910954 gagagaaactccaacttctctataaactttttttcttttccgttcatcgaggagaggtcgttttgggtcttttttt 36910879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 37040570 - 37040635
Alignment:
Q  45 gagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggtttt 110  Q
    |||| |||||||| ||||||| | ||||||||||||||| |||||||||  |||||||||||||||    
T  37040570 gagaaagaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtggtttt 37040635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 53808169 - 53808096
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttag 112  Q
    ||||||| ||||||||||||||||||||| |||  |||| ||||| |||| |||| ||||||||||| ||||||    
T  53808169 tttttagtgagagaaactccaacttctctctaagttttccttctctttcgctcatcgaggaggggtgattttag 53808096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 46220471 - 46220543
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgagga-ggggtggttttaggtcattttt 121  Q
    |||||||  ||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||||||||||||    
T  46220471 agaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt 46220543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 14859279 - 14859362
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    ||||||| |||||||||| |||||||||| |||  |||| ||||  |||  | |||||||||||||| ||||||||||||||||    
T  14859279 tttttagcgagagaaacttcaacttctctctaagttttcattctttttcacttattgaggaggggtgattttaggtcatttttt 14859362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 20465265 - 20465173
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||||| |||||||  | |||| |||||||||||||| |||||  || ||||||||||||| |||| |||||||| |||||||||| ||||    
T  20465265 gagagaaacttcaacttccttttaaa-tttctttctccttcattcatcaagtaggggtggttttatgtca-tttttgacatagaatcacccctct 20465173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 21290126 - 21290024
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||||||||   ||||||| |||  |||||| ||| |||  |||| |||||| |||| |||||||||| |||||||| |||||||||| |    
T  21290126 tttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaatcacccc 21290027  T
Q  139 tct 141  Q
    |||    
T  21290026 tct 21290024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 4821624 - 4821685
Alignment:
Q  74 tttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    |||||||||| ||| ||| | ||| ||||||||||||||||||||||||||| || ||||||    
T  4821624 tttctttctctttcattcgtcgagaaggggtggttttaggtcattttttgacctataatcac 4821685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 45568573 - 45568525
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||||    
T  45568573 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtg 45568525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 144
Target Start/End: Complemental strand, 20609170 - 20609099
Alignment:
Q  73 ctttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||| ||| | ||||||||||| ||||| || |||||||||| || ||||| | |||||||    
T  20609170 ctttctttctccttcattcgtcgaggaggggtgattttaagttattttttgacctaaaatcaaccctctaca 20609099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 29249025 - 29249128
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttt-taggtcattttttgacttagaatcacct 137  Q
    ||||||| ||||||||||| ||||||||| |||  ||||||||||||||  |||| ||| || | || |||  |||||| |||||||| ||||||||| |    
T  29249025 tttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatcgagaagtgatgatttgaaggtcactttttgacctagaatcactt 29249124  T
Q  138 ctct 141  Q
    ||||    
T  29249125 ctct 29249128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 29921834 - 29921937
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 137  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29921834 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29921933  T
Q  138 ctct 141  Q
    ||||    
T  29921934 ctct 29921937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 29970987 - 29971090
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtgg-ttttaggtcattttttgacttagaatcacct 137  Q
    |||||||  ||||| |||| | ||||||| |||  |||||||||| ||| ||| | |||||||||||| ||||||||||||||||||  || |||||| |    
T  29970987 tttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttgagctaaaatcactt 29971086  T
Q  138 ctct 141  Q
    ||||    
T  29971087 ctct 29971090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 141
Target Start/End: Original strand, 7546400 - 7546494
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    |||||||| || | ||||||| |||  ||||||||||  ||  |||| ||||||||||| |||||||||| |||||||  |||||||||| ||||    
T  7546400 gagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaatcacccctct 7546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 9998427 - 9998473
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  9998427 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 9998473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 10108196 - 10108242
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  10108196 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 10108242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 10233030 - 10233076
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  10233030 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 10233076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 12050776 - 12050730
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| ||||||||  ||||| ||||||||||||||||||||||    
T  12050776 gtgatttcgtcgtctaagcgcggcgttttgttgttcgtcgtcttgtg 12050730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 20988062 - 20988020
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttc 81  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  20988062 tttttagtgagagaaactccaacttctctctaaacttcctttc 20988020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 21431585 - 21431631
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||  ||||||| ||||||||| |||||||||||||||||||    
T  21431585 gtgatttcgccgtctaagtgcggcattgtgttgttcgtcgtcttgtg 21431631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 29239300 - 29239346
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||||||||||| | |||||| || |||||||||||||||||||    
T  29239300 gtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtg 29239346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 36461559 - 36461513
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  36461559 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 36461513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 38860248 - 38860202
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||| | ||||||||||||||||||||||    
T  38860248 gtgatttcgtcgtctaagtgcgacgttttgttgttcgtcgtcttgtg 38860202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 40487285 - 40487331
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  40487285 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 40487331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 40556672 - 40556718
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||    
T  40556672 gtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg 40556718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 54148951 - 54148993
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtct 259  Q
    |||||||| |||||||| ||||||||| |||||||||||||||    
T  54148951 gtgatttcgtcgtctaagtgcggcattgtgttgttcgtcgtct 54148993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 9320018 - 9320063
Alignment:
Q  218 tgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    ||||||| | |||||| ||||||||| |||||||||||||||||||    
T  9320018 tgatttcgttgtctaaatgcggcattgtgttgttcgtcgtcttgtg 9320063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 35865060 - 35865012
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| |||||| || ||||||| |||||||||||||    
T  35865060 gtgatttcgtcgtctaattgcggcgttgtgttgttagtcgtcttgtgtg 35865012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 51486939 - 51486987
Alignment:
Q  94 tgaggaggggtggttttaggtcattttttgacttagaatcacctctcta 142  Q
    |||||||||||| |||||||||| |||||||| |||| ||| |||||||    
T  51486939 tgaggaggggtgattttaggtcaatttttgacgtagagtcatctctcta 51486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 15282 - 15379
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  15282 gagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca 15379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 72161 - 72074
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  72161 gagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacc 72074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 1126 - 1230
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||| |||||| |||||||||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |    
T  1126 tttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccc 1225  T
Q  139 tctac 143  Q
    |||||    
T  1226 tctac 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 1305 - 1353
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtgtg 265  Q
    |||||||| |||||||| |||||| || |||||||||||||||||||||    
T  1305 gtgatttcttcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtg 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 144
Target Start/End: Original strand, 50578 - 50673
Alignment:
Q  49 gagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| | |||||||    
T  50578 gagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctctaca 50673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 33047 - 32950
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||||| ||||||||| |||||||||||||| ||||||| || ||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  33047 gagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctaca 32950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 32875 - 32829
Alignment:
Q  217 gtgatttcatcgtctaactgcggcattttgttgttcgtcgtcttgtg 263  Q
    |||||||| |||||||| |||||| ||||||||||||||||||||||    
T  32875 gtgatttcgtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg 32829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 15137 - 15040
Alignment:
Q  47 gagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||| ||||| | ||||  |||||| |||||||||| |||||||||| |||||||    
T  15137 gagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactctaca 15040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 8296 - 8401
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||   |  |||||| ||||||||||||||||| || |||||||||| || ||||||| |    
T  8296 tttttagtgagagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccc 8395  T
Q  139 tctaca 144  Q
    ||||||    
T  8396 tctaca 8401  T

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Target: scaffold0087 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 25597 - 25531
Alignment:
Q  78 tttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||| |||||||    
T  25597 tttctccttcgttcatcgaggaggggtggttttatgtcattttttgacctataatcacccctctaca 25531  T

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Target: scaffold0009 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 58386 - 58284
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctc 138  Q
    ||||||| ||||||||||||||||||||| |||  |||| || || |||  || | ||||||||||||||||||||||||||||||| || ||||||| |    
T  58386 tttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccc 58287  T
Q  139 tct 141  Q
    |||    
T  58286 tct 58284  T

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Target: scaffold0603 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 135
Target Start/End: Original strand, 7499 - 7595
Alignment:
Q  38 gtttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    |||||||| ||| ||||||||  ||||||| |||  |||||||||||||  ||||| |||||||| |||||||||||||||||||||| |||||||||    
T  7499 gtttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcac 7595  T

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Target: scaffold0554 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 10672 - 10742
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttt 120  Q
    |||||||| ||||||||| ||||||| ||| ||||||| ||||| |||||| |||||||||||||||||||    
T  10672 agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtcatttt 10742  T

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Target: scaffold0262 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 2121 - 2041
Alignment:
Q  42 ttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatttttt 122  Q
    |||| ||||||||||||||||||| |  ||||||||||||| |||| ||||||||||||  ||| ||||||||| ||||||    
T  2121 ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt 2041  T

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Target: scaffold0154 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 25124 - 25209
Alignment:
Q  48 agagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcac 135  Q
    ||||||||| |||||| ||| ||||||||||||||| ||| ||||| |  |||||||||||||| |||| ||||||||||| ||||||    
T  25124 agagaaacttcaacttttctctaaactttctttctctttcattcatcg--gaggggtggttttaagtcactttttgacttaaaatcac 25209  T

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Target: scaffold0492 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 12721 - 12795
Alignment:
Q  62 ttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacc 136  Q
    |||||| | ||||||||||||| ||  |||||  ||||| |||||||||||||||||||||||| ||||||||||    
T  12721 ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaatcacc 12795  T

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Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 31565 - 31499
Alignment:
Q  52 aaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcatt 118  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| ||| ||| ||||| ||||||    
T  31565 aaactccaacttttctttaaactttctttctccttcgttcatcgagcaggagtgattttatgtcatt 31499  T

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Target: scaffold0064 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 19342 - 19261
Alignment:
Q  39 tttttagagagagaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    ||||||| ||||||||||||||||||||| | || |||||||||| |||  |||| ||||||||||||||||| ||| |||||    
T  19342 tttttagtgagagaaactccaacttctctct-aattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt 19261  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 10333 - 10264
Alignment:
Q  50 agaaactccaacttctctataaactttctttctccttcgttcattgaggaggggtggttttaggtcattttt 121  Q
    |||||||  ||||||||| |||||||| |||||||||||||||||||||| || || ||||| |||||||||    
T  10333 agaaactttaacttctct-taaacttt-tttctccttcgttcattgaggatggatgattttatgtcattttt 10264  T

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Target: scaffold0888 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 141
Target Start/End: Complemental strand, 1925 - 1879
Alignment:
Q  95 gaggaggggtggttttaggtcattttttgacttagaatcacctctct 141  Q
    ||||||||||| | |||||||| |||||||| |||||||||||||||    
T  1925 gaggaggggtgatattaggtcaatttttgacctagaatcacctctct 1879  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 92939 - 92977
Alignment:
Q  96 aggaggggtggttttaggtcattttttgacttagaatca 134  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  92939 aggaggggtggttttaggttattttttgacctagaatca 92977  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 71549 - 71485
Alignment:
Q  79 ttctccttcgttcattgaggaggggtggttttaggtcattttttgacttagaatcacctctctaca 144  Q
    ||||||||| ||||  ||| ||||||||||||||||||| ||||||| || ||||||| |||||||    
T  71549 ttctccttcattcacagagaaggggtggttttaggtcat-ttttgacctaaaatcacccctctaca 71485  T

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