View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12471_low_1 (Length: 1083)

Name: NF12471_low_1
Description: NF12471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12471_low_1
NF12471_low_1
[»] chr2 (73 HSPs)
chr2 (541-1067)||(34761045-34761572)
chr2 (15-519)||(34760506-34761020)
chr2 (413-520)||(37431610-37431717)
chr2 (414-520)||(44617879-44617985)
chr2 (348-507)||(2609242-2609400)
chr2 (413-606)||(5470392-5470584)
chr2 (349-520)||(34679100-34679271)
chr2 (359-520)||(39918447-39918608)
chr2 (414-506)||(25411609-25411701)
chr2 (414-520)||(14489281-14489387)
chr2 (413-520)||(4925506-4925613)
chr2 (541-680)||(6592918-6593055)
chr2 (36-182)||(34748020-34748171)
chr2 (340-510)||(25333493-25333662)
chr2 (349-510)||(43028797-43028957)
chr2 (344-519)||(31827523-31827699)
chr2 (413-520)||(27489499-27489606)
chr2 (413-492)||(32969624-32969703)
chr2 (413-520)||(37803190-37803296)
chr2 (349-519)||(14943686-14943854)
chr2 (335-519)||(6592713-6592899)
chr2 (414-520)||(6510068-6510173)
chr2 (541-606)||(43028977-43029043)
chr2 (429-510)||(19895764-19895845)
chr2 (541-593)||(31827717-31827769)
chr2 (428-519)||(5008429-5008520)
chr2 (413-520)||(8553684-8553790)
chr2 (559-606)||(34679295-34679342)
chr2 (541-606)||(39918625-39918691)
chr2 (559-600)||(6510202-6510243)
chr2 (541-606)||(35718840-35718905)
chr2 (413-469)||(25452-25508)
chr2 (413-520)||(5362315-5362423)
chr2 (424-520)||(24472587-24472683)
chr2 (413-472)||(4576610-4576669)
chr2 (413-520)||(18969234-18969341)
chr2 (549-600)||(32969717-32969768)
chr2 (563-606)||(34100805-34100848)
chr2 (429-520)||(41196370-41196461)
chr2 (545-600)||(44617927-44617982)
chr2 (414-520)||(8857114-8857220)
chr2 (413-475)||(16043207-16043269)
chr2 (541-606)||(19206205-19206271)
chr2 (414-472)||(31827721-31827779)
chr2 (541-606)||(4576608-4576673)
chr2 (549-678)||(14489404-14489531)
chr2 (545-606)||(34760912-34760973)
chr2 (545-606)||(37431608-37431669)
chr2 (344-468)||(14489404-14489526)
chr2 (541-589)||(18969177-18969225)
chr2 (466-510)||(25092415-25092459)
chr2 (413-520)||(4576683-4576790)
chr2 (413-472)||(5470394-5470453)
chr2 (545-600)||(8857117-8857172)
chr2 (429-520)||(24306159-24306250)
chr2 (559-606)||(36195655-36195701)
chr2 (559-606)||(37431740-37431787)
chr2 (425-492)||(43741670-43741737)
chr2 (559-606)||(44297626-44297673)
chr2 (548-606)||(25450-25508)
chr2 (632-669)||(2609080-2609117)
chr2 (559-592)||(4925649-4925682)
chr2 (545-606)||(5470525-5470586)
chr2 (413-473)||(6510186-6510247)
chr2 (545-598)||(16043210-16043263)
chr2 (447-492)||(16143826-16143871)
chr2 (542-606)||(18709309-18709374)
chr2 (541-606)||(19895679-19895743)
chr2 (545-606)||(25333563-25333624)
chr2 (545-590)||(32013248-32013293)
chr2 (545-606)||(32969622-32969683)
chr2 (413-506)||(35718712-35718805)
chr2 (465-510)||(36195729-36195774)
[»] chr1 (64 HSPs)
chr1 (349-520)||(3377504-3377675)
chr1 (413-519)||(23220633-23220739)
chr1 (413-519)||(39642349-39642455)
chr1 (414-520)||(44672380-44672486)
chr1 (413-510)||(16874653-16874750)
chr1 (413-520)||(17760751-17760858)
chr1 (341-475)||(15659176-15659313)
chr1 (354-520)||(25085533-25085696)
chr1 (344-510)||(45738934-45739099)
chr1 (345-519)||(7579662-7579837)
chr1 (541-606)||(32295017-32295082)
chr1 (413-509)||(6569658-6569754)
chr1 (413-492)||(8301513-8301592)
chr1 (413-520)||(30849370-30849477)
chr1 (425-516)||(41997785-41997876)
chr1 (415-509)||(1096536-1096630)
chr1 (541-606)||(39642265-39642331)
chr1 (370-520)||(48319424-48319577)
chr1 (545-606)||(3377566-3377627)
chr1 (413-510)||(18632382-18632479)
chr1 (414-510)||(16545628-16545724)
chr1 (413-520)||(14978863-14978970)
chr1 (559-606)||(17760892-17760939)
chr1 (417-520)||(25486285-25486387)
chr1 (413-520)||(50226531-50226638)
chr1 (414-492)||(8009796-8009874)
chr1 (413-519)||(12960986-12961092)
chr1 (343-508)||(17692724-17692887)
chr1 (541-598)||(15659053-15659110)
chr1 (545-606)||(39642396-39642457)
chr1 (541-589)||(49426077-49426125)
chr1 (417-520)||(16298197-16298300)
chr1 (559-606)||(17692888-17692935)
chr1 (562-677)||(23220767-23220881)
chr1 (559-606)||(23891724-23891771)
chr1 (437-492)||(23891803-23891858)
chr1 (413-492)||(50401438-50401516)
chr1 (541-606)||(3377695-3377761)
chr1 (414-492)||(6320631-6320709)
chr1 (429-519)||(46505311-46505401)
chr1 (428-506)||(46880896-46880974)
chr1 (545-606)||(50401436-50401496)
chr1 (275-347)||(4949034-4949106)
chr1 (430-510)||(5287377-5287457)
chr1 (632-676)||(8009990-8010034)
chr1 (545-605)||(14978989-14979049)
chr1 (413-520)||(46572893-46572998)
chr1 (560-596)||(48319609-48319645)
chr1 (768-819)||(6556467-6556518)
chr1 (559-606)||(12960910-12960957)
chr1 (359-510)||(14190692-14190843)
chr1 (621-672)||(16545826-16545877)
chr1 (559-606)||(41997704-41997751)
chr1 (425-520)||(44436836-44436930)
chr1 (429-520)||(49426133-49426223)
chr1 (541-600)||(1096631-1096692)
chr1 (349-399)||(5287835-5287885)
chr1 (349-395)||(14978800-14978846)
chr1 (446-492)||(51462976-51463022)
chr1 (559-600)||(6569597-6569638)
chr1 (545-606)||(16874691-16874752)
chr1 (624-661)||(27864184-27864221)
chr1 (672-713)||(40923701-40923742)
chr1 (559-600)||(45739138-45739179)
[»] chr5 (67 HSPs)
chr5 (349-519)||(37897859-37898028)
chr5 (344-520)||(27904623-27904799)
chr5 (349-520)||(12406180-12406351)
chr5 (359-510)||(3333851-3334002)
chr5 (359-520)||(32391859-32392020)
chr5 (415-518)||(2974702-2974805)
chr5 (413-520)||(31080543-31080650)
chr5 (370-520)||(20629884-20630034)
chr5 (339-520)||(36798163-36798344)
chr5 (413-519)||(40276170-40276276)
chr5 (413-514)||(18403053-18403154)
chr5 (413-520)||(9852853-9852960)
chr5 (413-520)||(22300667-22300774)
chr5 (414-520)||(26702504-26702609)
chr5 (414-520)||(26972237-26972342)
chr5 (413-520)||(25910790-25910897)
chr5 (414-520)||(20512264-20512370)
chr5 (427-520)||(3999238-3999331)
chr5 (348-397)||(8284157-8284206)
chr5 (413-492)||(19131668-19131747)
chr5 (413-520)||(35166362-35166469)
chr5 (341-403)||(40133136-40133198)
chr5 (414-510)||(16132812-16132908)
chr5 (417-520)||(39574309-39574409)
chr5 (379-510)||(30604237-30604368)
chr5 (541-606)||(28446188-28446253)
chr5 (559-600)||(36798378-36798419)
chr5 (559-600)||(37897788-37897829)
chr5 (672-712)||(683440-683480)
chr5 (624-672)||(43098027-43098075)
chr5 (427-510)||(43098177-43098260)
chr5 (541-598)||(2974816-2974874)
chr5 (541-606)||(3333756-3333822)
chr5 (541-606)||(6130319-6130385)
chr5 (541-606)||(12406106-12406171)
chr5 (541-606)||(32391783-32391849)
chr5 (559-600)||(19340831-19340872)
chr5 (413-510)||(24405557-24405653)
chr5 (545-606)||(27904671-27904732)
chr5 (559-600)||(30603683-30603724)
chr5 (545-606)||(31080541-31080602)
chr5 (541-606)||(31080664-31080729)
chr5 (543-599)||(9852971-9853027)
chr5 (541-600)||(21066523-21066583)
chr5 (541-592)||(22300795-22300847)
chr5 (428-520)||(24779355-24779447)
chr5 (541-592)||(40276097-40276149)
chr5 (545-600)||(2974704-2974759)
chr5 (457-520)||(6130398-6130461)
chr5 (344-399)||(12406039-12406094)
chr5 (545-600)||(12406228-12406283)
chr5 (414-472)||(19340828-19340887)
chr5 (356-399)||(21066385-21066428)
chr5 (413-472)||(28446192-28446251)
chr5 (345-399)||(19340763-19340817)
chr5 (623-681)||(20629726-20629784)
chr5 (560-606)||(20629947-20629993)
chr5 (541-606)||(25364010-25364076)
chr5 (616-666)||(26702672-26702722)
chr5 (616-666)||(26972405-26972455)
chr5 (422-520)||(34320087-34320185)
chr5 (541-606)||(40132968-40133034)
chr5 (545-606)||(9852851-9852912)
chr5 (545-606)||(19131688-19131749)
chr5 (427-520)||(19340904-19340997)
chr5 (541-606)||(20629802-20629867)
chr5 (413-462)||(35166491-35166540)
[»] chr4 (86 HSPs)
chr4 (354-509)||(2016799-2016954)
chr4 (336-509)||(51362526-51362702)
chr4 (359-520)||(14449424-14449586)
chr4 (414-520)||(44356538-44356644)
chr4 (359-520)||(2836912-2837073)
chr4 (336-520)||(12719585-12719770)
chr4 (413-520)||(2654109-2654216)
chr4 (339-520)||(1420684-1420865)
chr4 (370-520)||(20112290-20112439)
chr4 (344-519)||(53312284-53312460)
chr4 (413-510)||(10059847-10059944)
chr4 (423-520)||(43074728-43074825)
chr4 (413-520)||(21597542-21597649)
chr4 (413-520)||(6637203-6637310)
chr4 (349-492)||(25909490-25909633)
chr4 (414-520)||(29697590-29697695)
chr4 (413-519)||(51371530-51371636)
chr4 (413-510)||(31553392-31553489)
chr4 (345-520)||(16292269-16292442)
chr4 (356-519)||(23759715-23759877)
chr4 (429-520)||(4796180-4796271)
chr4 (429-492)||(27978774-27978837)
chr4 (346-520)||(50769363-50769537)
chr4 (346-520)||(53924891-53925064)
chr4 (349-459)||(21957668-21957778)
chr4 (413-515)||(47999596-47999698)
chr4 (541-606)||(50769547-50769612)
chr4 (541-600)||(2837083-2837143)
chr4 (343-516)||(6207318-6207493)
chr4 (430-510)||(20118053-20118133)
chr4 (340-510)||(11824182-11824351)
chr4 (413-520)||(54983973-54984080)
chr4 (541-606)||(10059748-10059814)
chr4 (446-520)||(49185669-49185743)
chr4 (343-504)||(8965672-8965827)
chr4 (545-606)||(10059885-10059946)
chr4 (425-490)||(14060873-14060938)
chr4 (545-606)||(14449472-14449533)
chr4 (545-606)||(25909552-25909613)
chr4 (427-483)||(21322888-21322944)
chr4 (561-605)||(21597467-21597511)
chr4 (448-520)||(35393402-35393474)
chr4 (541-649)||(2181309-2181416)
chr4 (543-606)||(23759625-23759688)
chr4 (413-520)||(52462928-52463034)
chr4 (541-600)||(53924817-53924876)
chr4 (336-513)||(1571389-1571562)
chr4 (349-403)||(8070631-8070685)
chr4 (349-403)||(19909176-19909230)
chr4 (446-492)||(29775460-29775506)
chr4 (413-510)||(35383909-35384006)
chr4 (541-606)||(35393852-35393918)
chr4 (545-606)||(6207362-6207423)
chr4 (541-606)||(6614910-6614974)
chr4 (541-606)||(11983576-11983639)
chr4 (349-520)||(21871527-21871695)
chr4 (349-520)||(21927388-21927556)
chr4 (545-606)||(51362604-51362665)
chr4 (423-520)||(54855381-54855477)
chr4 (349-397)||(1420538-1420586)
chr4 (545-605)||(2016857-2016917)
chr4 (562-606)||(8965721-8965765)
chr4 (559-603)||(18937308-18937352)
chr4 (428-492)||(34567784-34567848)
chr4 (559-595)||(54983919-54983955)
chr4 (543-606)||(1420599-1420662)
chr4 (542-672)||(3658109-3658239)
chr4 (446-520)||(6614984-6615056)
chr4 (541-595)||(11824379-11824434)
chr4 (413-520)||(14016792-14016899)
chr4 (559-606)||(14060819-14060866)
chr4 (458-509)||(18937391-18937442)
chr4 (563-606)||(21957673-21957716)
chr4 (349-400)||(43074826-43074877)
chr4 (545-600)||(44356586-44356641)
chr4 (632-675)||(51362815-51362858)
chr4 (545-607)||(1420732-1420794)
chr4 (541-606)||(26089653-26089719)
chr4 (349-399)||(35615317-35615367)
chr4 (446-492)||(53061716-53061762)
chr4 (414-472)||(53924814-53924872)
chr4 (344-397)||(2017051-2017104)
chr4 (545-606)||(2836964-2837025)
chr4 (354-399)||(14060764-14060809)
chr4 (559-604)||(20737436-20737481)
chr4 (545-594)||(43074776-43074825)
[»] chr3 (85 HSPs)
chr3 (344-519)||(51315625-51315800)
chr3 (343-520)||(44433205-44433383)
chr3 (346-510)||(44585936-44586100)
chr3 (413-520)||(44436538-44436645)
chr3 (413-520)||(33329757-33329864)
chr3 (413-520)||(43747420-43747527)
chr3 (413-519)||(48348400-48348505)
chr3 (343-520)||(578553-578728)
chr3 (349-520)||(20432324-20432494)
chr3 (359-510)||(54719147-54719296)
chr3 (414-520)||(8024922-8025028)
chr3 (413-520)||(28712521-28712628)
chr3 (418-520)||(25843437-25843539)
chr3 (425-508)||(54464241-54464324)
chr3 (413-519)||(27178288-27178394)
chr3 (343-520)||(1938314-1938490)
chr3 (413-481)||(38957913-38957981)
chr3 (413-520)||(3916496-3916603)
chr3 (559-678)||(4474272-4474388)
chr3 (413-520)||(28204626-28204733)
chr3 (426-520)||(86653-86747)
chr3 (429-519)||(38177259-38177349)
chr3 (545-606)||(38957911-38957972)
chr3 (349-520)||(1814697-1814864)
chr3 (428-512)||(4474150-4474233)
chr3 (413-520)||(19404534-19404641)
chr3 (559-606)||(47189661-47189708)
chr3 (413-520)||(47189734-47189841)
chr3 (541-606)||(44436453-44436519)
chr3 (545-606)||(86638-86699)
chr3 (417-506)||(35359067-35359156)
chr3 (545-606)||(44433252-44433313)
chr3 (545-606)||(44436586-44436647)
chr3 (425-510)||(44624703-44624787)
chr3 (559-600)||(51315565-51315606)
chr3 (545-606)||(51315672-51315733)
chr3 (560-668)||(14340736-14340844)
chr3 (413-513)||(14340881-14340981)
chr3 (541-606)||(38958028-38958094)
chr3 (559-606)||(15978894-15978941)
chr3 (559-606)||(25154383-25154430)
chr3 (541-668)||(27178143-27178268)
chr3 (413-472)||(28944095-28944154)
chr3 (559-606)||(54719055-54719102)
chr3 (541-603)||(791382-791443)
chr3 (413-459)||(28712663-28712709)
chr3 (544-594)||(28944105-28944155)
chr3 (541-606)||(44433120-44433186)
chr3 (340-461)||(50802653-50802773)
chr3 (340-461)||(50873104-50873224)
chr3 (417-520)||(52008313-52008418)
chr3 (541-606)||(1814613-1814678)
chr3 (427-520)||(7218291-7218384)
chr3 (559-600)||(8024845-8024886)
chr3 (541-606)||(28712647-28712711)
chr3 (337-520)||(36687731-36687918)
chr3 (545-606)||(44585974-44586035)
chr3 (337-393)||(36677783-36677839)
chr3 (541-672)||(43747278-43747409)
chr3 (424-520)||(46226775-46226871)
chr3 (413-520)||(36677651-36677758)
chr3 (559-606)||(43747482-43747529)
chr3 (433-520)||(53184596-53184682)
chr3 (562-600)||(86768-86806)
chr3 (560-606)||(12759573-12759618)
chr3 (623-673)||(14349374-14349424)
chr3 (345-399)||(14856815-14856869)
chr3 (560-606)||(15976302-15976348)
chr3 (349-399)||(22494556-22494606)
chr3 (541-606)||(25248870-25248936)
chr3 (541-606)||(28204542-28204608)
chr3 (446-492)||(33447139-33447185)
chr3 (448-510)||(36567024-36567086)
chr3 (413-459)||(38958046-38958092)
chr3 (564-606)||(44585852-44585894)
chr3 (559-600)||(3192984-3193025)
chr3 (343-396)||(7218419-7218472)
chr3 (559-600)||(14992692-14992733)
chr3 (545-606)||(33329805-33329866)
chr3 (355-403)||(38177187-38177236)
chr3 (413-506)||(43586715-43586808)
chr3 (459-520)||(44127461-44127522)
chr3 (541-606)||(44624814-44624879)
chr3 (447-492)||(49001811-49001856)
chr3 (545-606)||(54719185-54719246)
[»] chr7 (60 HSPs)
chr7 (344-520)||(28785895-28786073)
chr7 (413-520)||(36580415-36580522)
chr7 (413-509)||(18504310-18504406)
chr7 (370-512)||(20184940-20185082)
chr7 (344-519)||(4049704-4049882)
chr7 (413-520)||(15107132-15107239)
chr7 (425-520)||(36903341-36903436)
chr7 (343-513)||(41243641-41243809)
chr7 (413-510)||(6726405-6726501)
chr7 (541-606)||(15348141-15348206)
chr7 (347-510)||(18186601-18186765)
chr7 (349-519)||(28472393-28472560)
chr7 (541-606)||(5172707-5172773)
chr7 (429-519)||(8073957-8074047)
chr7 (541-606)||(36580338-36580403)
chr7 (413-489)||(28350183-28350259)
chr7 (413-492)||(15029128-15029206)
chr7 (425-520)||(15348029-15348124)
chr7 (413-492)||(23826086-23826165)
chr7 (541-606)||(4049905-4049971)
chr7 (414-520)||(44312883-44312988)
chr7 (549-606)||(14247358-14247415)
chr7 (370-520)||(35250143-35250292)
chr7 (344-403)||(6792052-6792112)
chr7 (413-459)||(3381929-3381975)
chr7 (559-668)||(8074076-8074186)
chr7 (414-492)||(17876237-17876315)
chr7 (560-674)||(18186436-18186550)
chr7 (541-606)||(18504424-18504490)
chr7 (370-520)||(21505758-21505907)
chr7 (616-670)||(23746153-23746207)
chr7 (541-606)||(28785822-28785888)
chr7 (414-520)||(29834291-29834397)
chr7 (349-490)||(47909697-47909837)
chr7 (417-510)||(5172582-5172675)
chr7 (559-592)||(10097633-10097666)
chr7 (545-606)||(15029126-15029187)
chr7 (559-600)||(35250322-35250363)
chr7 (559-600)||(36580477-36580518)
chr7 (541-606)||(36903455-36903520)
chr7 (541-606)||(41243827-41243892)
chr7 (414-510)||(17931880-17931976)
chr7 (543-606)||(20185102-20185166)
chr7 (624-660)||(44312756-44312792)
chr7 (428-492)||(45717980-45718044)
chr7 (559-606)||(3381927-3381974)
chr7 (413-472)||(15348145-15348204)
chr7 (429-516)||(19644885-19644972)
chr7 (344-403)||(19645058-19645117)
chr7 (545-668)||(28350119-28350242)
chr7 (559-606)||(28472581-28472627)
chr7 (413-456)||(40872351-40872394)
chr7 (560-606)||(3247377-3247423)
chr7 (560-606)||(15107195-15107241)
chr7 (545-606)||(9500089-9500150)
chr7 (545-606)||(18186639-18186700)
chr7 (560-605)||(18504309-18504354)
chr7 (541-594)||(19644987-19645040)
chr7 (672-713)||(28117699-28117740)
chr7 (349-398)||(36903529-36903578)
[»] scaffold0248 (2 HSPs)
scaffold0248 (413-513)||(470-570)
scaffold0248 (565-665)||(617-718)
[»] chr8 (40 HSPs)
chr8 (344-520)||(41487350-41487525)
chr8 (413-504)||(37813247-37813338)
chr8 (413-520)||(45177268-45177375)
chr8 (413-510)||(3676278-3676375)
chr8 (413-519)||(30539132-30539238)
chr8 (425-506)||(14880414-14880495)
chr8 (344-511)||(32071164-32071327)
chr8 (413-510)||(6807319-6807416)
chr8 (413-514)||(21486721-21486822)
chr8 (413-520)||(16982751-16982857)
chr8 (413-492)||(37939978-37940056)
chr8 (413-474)||(20853443-20853504)
chr8 (429-510)||(29044697-29044778)
chr8 (344-399)||(19499436-19499491)
chr8 (413-520)||(25144009-25144116)
chr8 (541-592)||(27545540-27545591)
chr8 (414-520)||(23702275-23702381)
chr8 (541-674)||(25144126-25144257)
chr8 (560-606)||(41487265-41487311)
chr8 (545-675)||(41487398-41487527)
chr8 (423-520)||(29790834-29790931)
chr8 (545-606)||(37813279-37813340)
chr8 (414-510)||(33298407-33298503)
chr8 (413-519)||(29657770-29657877)
chr8 (413-519)||(22846510-22846616)
chr8 (413-519)||(27545408-27545512)
chr8 (541-606)||(30539053-30539119)
chr8 (450-507)||(25897073-25897129)
chr8 (413-474)||(26823893-26823954)
chr8 (446-518)||(4132854-4132926)
chr8 (624-660)||(20228242-20228278)
chr8 (347-399)||(25896991-25897043)
chr8 (414-493)||(45457157-45457237)
chr8 (414-492)||(12278903-12278981)
chr8 (413-519)||(22192439-22192545)
chr8 (341-399)||(28349568-28349626)
chr8 (413-519)||(44101431-44101536)
chr8 (545-606)||(6807357-6807418)
chr8 (559-600)||(14880537-14880578)
chr8 (565-606)||(33298545-33298586)
[»] scaffold0015 (3 HSPs)
scaffold0015 (413-520)||(76929-77035)
scaffold0015 (541-606)||(77044-77110)
scaffold0015 (545-606)||(76927-76987)
[»] chr6 (43 HSPs)
chr6 (354-519)||(10727335-10727500)
chr6 (413-510)||(26311554-26311651)
chr6 (349-520)||(6036800-6036969)
chr6 (349-520)||(30349352-30349522)
chr6 (426-510)||(3812820-3812903)
chr6 (338-514)||(26601453-26601628)
chr6 (414-520)||(32143326-32143432)
chr6 (343-520)||(33399783-33399958)
chr6 (414-518)||(1377275-1377379)
chr6 (414-518)||(1385023-1385127)
chr6 (414-520)||(266252-266357)
chr6 (413-492)||(2853583-2853662)
chr6 (543-606)||(12766401-12766464)
chr6 (348-510)||(239095-239257)
chr6 (541-606)||(2853492-2853557)
chr6 (415-520)||(5003219-5003324)
chr6 (413-520)||(18031082-18031189)
chr6 (559-600)||(2840860-2840901)
chr6 (545-606)||(10727382-10727443)
chr6 (559-668)||(33401257-33401364)
chr6 (354-462)||(20474903-20475010)
chr6 (559-606)||(2203354-2203401)
chr6 (559-606)||(3579659-3579706)
chr6 (425-472)||(6036723-6036770)
chr6 (563-606)||(26601666-26601709)
chr6 (559-606)||(28011328-28011375)
chr6 (545-606)||(2853603-2853664)
chr6 (541-606)||(3812931-3812996)
chr6 (542-606)||(10727255-10727320)
chr6 (416-509)||(17248706-17248799)
chr6 (430-510)||(11351719-11351799)
chr6 (417-472)||(5605903-5605958)
chr6 (541-592)||(6036723-6036774)
chr6 (413-472)||(12766403-12766462)
chr6 (559-606)||(17248844-17248890)
chr6 (413-520)||(17532318-17532424)
chr6 (429-503)||(2840965-2841039)
chr6 (564-606)||(26311459-26311501)
chr6 (446-492)||(29874371-29874417)
chr6 (549-606)||(238992-239049)
chr6 (413-462)||(266188-266237)
chr6 (344-397)||(2203185-2203238)
chr6 (561-594)||(5003283-5003316)
[»] scaffold0137 (1 HSPs)
scaffold0137 (349-514)||(19917-20081)
[»] scaffold0328 (2 HSPs)
scaffold0328 (413-520)||(9478-9585)
scaffold0328 (545-606)||(9476-9537)
[»] scaffold0417 (2 HSPs)
scaffold0417 (434-520)||(9425-9511)
scaffold0417 (624-673)||(9604-9653)
[»] scaffold0025 (2 HSPs)
scaffold0025 (413-509)||(19180-19276)
scaffold0025 (545-606)||(19217-19278)
[»] scaffold0011 (2 HSPs)
scaffold0011 (413-520)||(145420-145527)
scaffold0011 (563-606)||(145561-145604)
[»] scaffold0062 (2 HSPs)
scaffold0062 (559-606)||(46141-46188)
scaffold0062 (414-507)||(46228-46321)
[»] scaffold0194 (2 HSPs)
scaffold0194 (413-510)||(25050-25146)
scaffold0194 (624-669)||(24895-24940)
[»] scaffold0578 (1 HSPs)
scaffold0578 (428-516)||(3157-3245)
[»] scaffold0150 (3 HSPs)
scaffold0150 (417-492)||(9705-9779)
scaffold0150 (413-472)||(9617-9676)
scaffold0150 (541-606)||(9615-9680)
[»] scaffold0067 (2 HSPs)
scaffold0067 (563-606)||(4220-4263)
scaffold0067 (413-458)||(4216-4261)
[»] scaffold0515 (1 HSPs)
scaffold0515 (338-399)||(3631-3692)
[»] scaffold0306 (1 HSPs)
scaffold0306 (338-399)||(3631-3692)
[»] scaffold0166 (1 HSPs)
scaffold0166 (428-520)||(21738-21830)
[»] scaffold0041 (1 HSPs)
scaffold0041 (413-456)||(93888-93931)
[»] scaffold0854 (1 HSPs)
scaffold0854 (447-492)||(2004-2049)


Alignment Details
Target: chr2 (Bit Score: 389; Significance: 0; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 541 - 1067
Target Start/End: Original strand, 34761045 - 34761572
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgta 640  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||||||        |||||| |||||||| ||||||||     
T  34761045 accaaaaattggctatg-gggccaaaactgctacaattgcaaaacttaggtggcggttttgtagttctttttcttaaggagttaaaatcgcaacttcgtg 34761143  T
Q  641 aaagttaggagacgaaaactactattaaacctaaaatatatggacttaattgataataagtggttaaatataggaataataggatcaaccgtacagttta 740  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34761144 aaagttaggggacgaaaactgctattaaacctaaaatatatggccttaattgatagtaagtggttaaatataggaataattggatcaaccgtacagttta 34761243  T
Q  741 atagaatagggaatctttttgaaatattaatctcaagggtctatttgagagggtgctacaaagttaacgactaatttggtgattgtacttgtctagtcga 840  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||| ||||||||||||||||||||||||||| |||||||    
T  34761244 atagaatagggaatctttttgaaatatcaatctcaagggtctatttgagagcttactacaaagtcaacgactaatttggtgattgtacttgtttagtcga 34761343  T
Q  841 ctaatattattcaaaacagggaactgcactataaaaacaatagaaaagtgcaaagcaggttattgatcactcgaacttattattacagaaacaaattgat 940  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34761344 ctaatattattcaaaacagggaactgcactataaaaacaatagaaaagtgcaaagcaggttattgatcactcgaacttattattacagaaacaaattgat 34761443  T
Q  941 tcataataacagacaaacaaaatcaaataatctatgaacttggttaattttgattagttgcttgatgaagaag--nnnnnnncttacaaatagtatggat 1038  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||         ||||||||||||||||||    
T  34761444 tcataataacagacaaaaaaaatcaaataatctatgaacttagttaattttgattagttgcttgatgaagaagaaaaaaaaacttacaaatagtatggat 34761543  T
Q  1039 gaagtatatcggaatactgatgcagtagc 1067  Q
    |||||||||||||||||||||||||||||    
T  34761544 gaagtatatcggaatactgatgcagtagc 34761572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 15 - 519
Target Start/End: Original strand, 34760506 - 34761020
Alignment:
Q  15 cctgtgattccccacttttcggtacttagagtttcgcccataggttcttaagaataataacattagatagggtgagaagtattagattttggtacaccaa 114  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34760506 cctgtgattccctacttttcggtacttagagtttcacccataggttcttaagaataataacattagatagggtgagaagtattagattttggtacaccaa 34760605  T
Q  115 atatgaatacttatactatatgttagagtaatactagttttctaccgagtaaaccatcaaattcgtctacgactttgtatgacgctctcaaataagttca 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34760606 atatgaatacttatactatatgttagagtaatactagttttctactgggtaaaccaccaaattcgtctacgactttgtatgacgctctcaaataagttca 34760705  T
Q  215 tgggagcatgaatatttcaaaaggtttattgattctgtcgaatt---------ttacacatattagttcatgttaggaactacattgatagtaagtggta 305  Q
    | ||||||||||||||||||||||||||||||||| ||||||||         |||| ||||||||||||||||||||||||||||||||||| |||||     
T  34760706 tcggagcatgaatatttcaaaaggtttattgattccgtcgaattttactcatattactcatattagttcatgttaggaactacattgatagtacgtggtt 34760805  T
Q  306 aaatataaagtctaaattattagtaagttgttaaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag-g 404  Q
    |||||||||||||||||||||||||||||||||||||||| | | || ||||||||||||||||||| ||| |||||||||||||||||| |||||||      
T  34760806 aaatataaagtctaaattattagtaagttgttaaaatatatgctcaatagcaattttaaccccataattttcccaaagttgcgattttggtccctaagaa 34760905  T
Q  405 nnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagt 504  Q
            |||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||    
T  34760906 aaaaaaaactacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacgtggtctatgctgacgtggcaccctaagt 34761005  T
Q  505 gaggtgtcacatgtt 519  Q
    |||||||||||||||    
T  34761006 gaggtgtcacatgtt 34761020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 37431610 - 37431717
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||||||| ||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||||| ||| ||||||||||||| |    
T  37431610 ctacaaaatcgcccactaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 37431709  T
Q  513 acatgtta 520  Q
    ||||||||    
T  37431710 acatgtta 37431717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 44617985 - 44617879
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||| |||||||| ||| ||||| ||||||||||    
T  44617985 tacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtca 44617886  T
Q  514 catgtta 520  Q
    | |||||    
T  44617885 cctgtta 44617879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 348 - 507
Target Start/End: Complemental strand, 2609400 - 2609242
Alignment:
Q  348 tttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcg 446  Q
    ||||| |||| ||||||| | ||||||||| ||||||||||||||||| ||||||||         ||||||||||||||| |||||||| ||||||| |    
T  2609400 tttaatagcagttttaactcaataactttttcaaagttgcgattttggtcccctaag--aaaaaaactacaaaatcgccccataagttttacatatgtgg 2609303  T
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgag 507  Q
    |||||||||||||||||| |||||||||| ||||||| ||||| || ||| ||||||||||    
T  2609302 cagttttgacccccaagatcaattttgactcggtctacgctgatgtggcaccctaagtgag 2609242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 413 - 606
Target Start/End: Complemental strand, 5470584 - 5470392
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||||| |||||||| ||| ||| ||||||||| |||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||| |    
T  5470584 ctacaaaaccgccccttaagttttacatctgtggcagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagtgaggtgcc 5470485  T
Q  513 acatgttannnnnnnnnnnnnnnnnnnnaccaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    || ||||                     |||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| |||||    
T  5470484 acgtgtt-ttatttattattatttttttaccaaaaattggccttgggggccaaaactgctacaattgcaaaacttagggggcagttttgtagtt 5470392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 349 - 520
Target Start/End: Original strand, 34679100 - 34679271
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc-cctaaggnnnnnnnnctacaaaatcgcccc-ctaagttttgcatatgtcg 446  Q
    |||| |||| ||||| |||| |||||||||||||||||||||||||||| ||||||          ||||||| |||||| |||||||||||| |||| |    
T  34679100 ttaatagcagttttagccccctaacttttccaaagttgcgattttggccacctaagaaaaaaat--tacaaaaccgcccccctaagttttgcacatgtgg 34679197  T
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||| || ||||||| ||||||||| ||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  34679198 cagttttggcctccaagacaaattttgacccggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 34679271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 359 - 520
Target Start/End: Original strand, 39918447 - 39918608
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    ||||| |||| |||||||  |||||||||||||||||||||  | |        || ||||||||||| ||||||||||||||||| || |||||| |||    
T  39918447 ttttagccccctaactttctcaaagttgcgattttggccccctaagaaaaaaaactgcaaaatcgcccgctaagttttgcatatgtggctgttttggccc 39918546  T
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||| ||||||||||| ||||||  |||||||| ||| ||||||||||||| ||| |||||    
T  39918547 ccaaggccaattttgactcggtcttcgctgacgtggcaccctaagtgaggtgccacgtgtta 39918608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 414 - 506
Target Start/End: Original strand, 25411609 - 25411701
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    ||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||| |||||||||||||||| ||| | |||||||    
T  25411609 tacaaaaccgccccctaagttttgcatctgtggcagttttcacccccaataccaattttgactcggtctatgctgacgtggcaccataagtga 25411701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 14489281 - 14489387
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||  ||| |||||||||||| ||||||||||||||||| ||||||| ||||| || ||| |||| |||||||| ||    
T  14489281 tacaaaaccgccccctaagttttgcacctgtggcagttttgacctccaagaccaattttgactcggtctacgctgatgtggcaccctacgtgaggtgcca 14489380  T
Q  514 catgtta 520  Q
    | |||||    
T  14489381 cgtgtta 14489387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 4925506 - 4925613
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||||   | ||||| |||||||| ||| ||||||| ||||| |    
T  4925506 ctacaaaaccgtcccctaagttttgcatatgtggcagttttgacccctaagaccaattttggttctgtctacgctgacgtggcaccctaagtaaggtgcc 4925605  T
Q  513 acatgtta 520  Q
    || |||||    
T  4925606 acgtgtta 4925613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 541 - 680
Target Start/End: Original strand, 6592918 - 6593055
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgta 640  Q
    |||||||||||||  || ||||||||||||||||| |||||||||||||||||| ||||| |||||         | || |||||||||| ||||||||     
T  6592918 accaaaaattggctttgggggccaaaactgctacagttgcaaaacttagggggcagttttgtagtt--ttttttaagggggctaaaatcgcaacttcgtg 6593015  T
Q  641 aaagttaggagacgaaaactactattaaacctaaaatata 680  Q
    ||||||||| | ||||||||||| |||| |||||||||||    
T  6593016 aaagttaggtggcgaaaactactgttaagcctaaaatata 6593055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 36 - 182
Target Start/End: Original strand, 34748020 - 34748171
Alignment:
Q  36 gtacttagagtttcgcccataggttcttaagaataataacattagatagggtgagaagtattagattttggtacaccaaatatgaatactt-----atac 130  Q
    |||||| ||||||  || ||||| ||||||||||||||  |||| |||||||||   ||||| ||||||||| |||||||||||| |||||      |||    
T  34748020 gtacttggagtttgaccgataggctcttaagaataatagtattaaatagggtgaagggtattcgattttggttcaccaaatatgagtacttttttattac 34748119  T
Q  131 tatatgttagagtaatactagttttctaccgagtaaaccatcaaattcgtct 182  Q
    ||||| ||||||||||||||||||||||  |||||||||| ||||| |||||    
T  34748120 tatattttagagtaatactagttttctagtgagtaaaccaccaaatccgtct 34748171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 340 - 510
Target Start/End: Original strand, 25333493 - 25333662
Alignment:
Q  340 aatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgca 439  Q
    |||||||| |||| | ||||||||||||| |||||||||||||||||||||||||| |||| | |        ||| |||| | ||||||||||||||||    
T  25333493 aatataggcttaataacaattttaaccccttaacttttccaaagttgcgattttggtcccttaag-aaaaaaactataaaaccaccccctaagttttgca 25333591  T
Q  440 tatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
      ||| |||||||||  | ||||| |||||||||||  |||||| |||||||| ||| ||||||| |||||    
T  25333592 cctgtggcagttttggtctccaaggccaattttgacttggtctacgctgacgtggcaccctaagtaaggtg 25333662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 349 - 510
Target Start/End: Original strand, 43028797 - 43028957
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| ||||| |||| |||||| |||||||||||||||||||||||  | |        |||||||| | ||||||||||||||||| ||| |||    
T  43028797 ttaatagcagttttagccccctaacttctccaaagttgcgattttggccccctaagaaaaaaaactacaaaacc-ccccctaagttttgcatctgtggca 43028895  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||| || | | | ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  43028896 gttttggcctctagggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 43028957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 31827523 - 31827699
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    |||| |||| |||| ||||||| || ||||||||||||||||| ||||||| ||||  | |        |||||||||| ||||||||| ||||||| ||    
T  31827523 taggcttaatagcagttttaactccctaacttttccaaagttgtgattttgcccccctaagaaaaaagactacaaaatcaccccctaagctttgcatctg 31827622  T
Q  444 tcgcagttttgaccccc-aagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    |  |||||||| ||||| || | |||||||||  ||||||| |||||||| ||| ||||||||||||| ||||||||    
T  31827623 tgccagttttggccccccaaaatcaattttgattcggtctacgctgacgtggcaccctaagtgaggtgccacatgtt 31827699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 27489499 - 27489606
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||  |||||||| |||||||| ||| ||||||||| || |||||  |||||||||| |||| || |||||||| ||||||||||||||||| |    
T  27489499 ctacaaaattaccccctaacttttgcatctgtggcagttttggcctccaagggcaattttgactcggtttacgctgacgtggcatcctaagtgaggtgac 27489598  T
Q  513 acatgtta 520  Q
    || |||||    
T  27489599 acgtgtta 27489606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 32969624 - 32969703
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||||||||||||||||||| ||| ||| ||||||||| | |||||| ||||||||||| ||||||| ||||||||    
T  32969624 ctacaaaatcgccccctaagtttttcatttgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgt 32969703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 37803190 - 37803296
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||| |||||||||||||| ||| |||||||||| ||||||   |||||||||| ||||||| |||||||| ||| ||||||| |||||||    
T  37803190 ctacaaaaccgcctcctaagttttgcatttgtggcagttttga-ccccaatgtcaattttgactcggtctacgctgacgtggcaccctaagtaaggtgtc 37803288  T
Q  513 acatgtta 520  Q
    || |||||    
T  37803289 acgtgtta 37803296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 14943854 - 14943686
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| ||||| |||| ||||||||||||||||| |||||||| | |||||         |||||||| ||||| ||||||||||||  ||| |||    
T  14943854 ttaatagcagttttagccccttaacttttccaaagttgtgattttggtctctaag--aaaaaaactacaaaaccgccctctaagttttgcacctgtggca 14943757  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
     ||||| |||||||| | ||||||||| ||||||| ||||| || ||| ||||||||||||| ||| ||||    
T  14943756 tttttggcccccaaggctaattttgactcggtctacgctgatgtggcaccctaagtgaggtgccacgtgtt 14943686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 335 - 519
Target Start/End: Original strand, 6592713 - 6592899
Alignment:
Q  335 gttaaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttg-gcccctaag--gnnnnnnnnctacaaaatcgccccctaa 431  Q
    ||||||||||||| |||| |||| ||||| |||| |||||||||||||||||||||||||  ||||||||  |         ||||||| |  |||||||    
T  6592713 gttaaaatataggcttaatagcagttttagccccctaacttttccaaagttgcgattttgaccccctaagaagatttttttttacaaaa-ctgcccctaa 6592811  T
Q  432 gttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    ||||||||||||| ||||||||| ||| |||  | ||||||||| | ||||| |||||| | ||| ||||||||||||| ||| ||||    
T  6592812 gttttgcatatgtggcagttttggccctcaatgctaattttgactcagtctacgctgacattgcaccctaagtgaggtgccacgtgtt 6592899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 6510068 - 6510173
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| |||||||||| |||||||||||| |||| |||| || |||||  |||||||||  || |||||| |||||| ||| ||||||||||||| ||    
T  6510068 tacaaaaccgccccctaatttttgcatatgtggcag-tttggcctccaaggtcaattttgaatcgatctatgttgacgtggcaccctaagtgaggtgcca 6510166  T
Q  514 catgtta 520  Q
    |||||||    
T  6510167 catgtta 6510173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 43028977 - 43029043
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||||||||||||||| |||||    
T  43028977 accaaaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgtagtt 43029043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 429 - 510
Target Start/End: Complemental strand, 19895845 - 19895764
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||||| ||||||||  |||||||  ||||||||||  |||| ||||||||||||||| |||||||||||||    
T  19895845 taagttttacatatgtggcagttttagcccccaatgccaattttgattcggtttatgctgacgtagcaccctaagtgaggtg 19895764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 541 - 593
Target Start/End: Original strand, 31827717 - 31827769
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttaggggg 593  Q
    |||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  31827717 accaaaaattggccttgggggccaaaactgctacagttgcaaaacttaggggg 31827769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 428 - 519
Target Start/End: Complemental strand, 5008520 - 5008429
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    ||||||||||||| ||| ||| ||||| ||| ||||  |||||||||| ||||||| |||||||| ||| |||||||||| || ||||||||    
T  5008520 ctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccacatgtt 5008429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 8553790 - 8553684
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||||| || |||||||||||| ||| ||||||||| | |||||   |||||| ||| ||||||||||||||||  || ||||||||||||| |    
T  8553790 ctacaaaatcgcaccttaagttttgcatttgtggcagttttgtctcccaaagtcaattt-gactcggtctatgctgacgtgacaccctaagtgaggtgcc 8553692  T
Q  513 acatgtta 520  Q
    || |||||    
T  8553691 acgtgtta 8553684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 34679295 - 34679342
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  34679295 gggccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 34679342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 39918625 - 39918691
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||| ||||||| |||||||||||||||||||||||| |||||    
T  39918625 accaaaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtagtt 39918691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 6510202 - 6510243
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  6510202 gggccaaaactgctacagttgcaaaacttagggggcggtttt 6510243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 35718840 - 35718905
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| || |  ||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  35718840 accaaaaattgaccttaggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtt 35718905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 413 - 469
Target Start/End: Original strand, 25452 - 25508
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaat 469  Q
    |||||||| ||||||||||||||||||  ||| |||||||||||||||||| |||||    
T  25452 ctacaaaaccgccccctaagttttgcacctgtggcagttttgacccccaaggccaat 25508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 5362423 - 5362315
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaaga-ccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgt 511  Q
    ||||||||| | ||| |||||||| ||  ||| ||||||||| || |||| | ||||||||||| | ||||| ||||||||  ||||||||||||||||     
T  5362423 ctacaaaattgtcccttaagttttacaactgtggcagttttggcctccaaaagccaattttgactcagtctacgctgacgtgacatcctaagtgaggtgc 5362324  T
Q  512 cacatgtta 520  Q
    |||||||||    
T  5362323 cacatgtta 5362315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 424 - 520
Target Start/End: Complemental strand, 24472683 - 24472587
Alignment:
Q  424 ccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||||||||| ||| ||||||||| || ||||  ||||||||||| | |||||  || |||| ||| ||||||||||||| ||| |||||    
T  24472683 ccccctaagttttgcatctgtggcagttttggccgccaatgccaattttgactccgtctacactaacgtggcaccctaagtgaggtgccacgtgtta 24472587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 4576610 - 4576669
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||||||||| ||| |||||||||||  ||| ||||||||| |||||||||||||||||    
T  4576610 ctacaaaatcgtcccataagttttgcaactgtagcagttttggcccccaagaccaatttt 4576669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 18969341 - 18969234
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||| || |||| ||||| || ||| || ||||||||||||||| |||||||||||  || ||| ||||||||  ||  |||| |||||||||    
T  18969341 ctacaaaatcgtcctctaaattttgtatttgtggctgttttgacccccaaggccaattttgactaggcctacgctgacgtgacactctaaatgaggtgtc 18969242  T
Q  513 acatgtta 520  Q
    || |||||    
T  18969241 acgtgtta 18969234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 549 - 600
Target Start/End: Original strand, 32969717 - 32969768
Alignment:
Q  549 ttggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||| |||| ||||||||||||||||  ||||||||||||||||||||||||    
T  32969717 ttggtcatgggggccaaaactgctactgttgcaaaacttagggggcggtttt 32969768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 563 - 606
Target Start/End: Complemental strand, 34100848 - 34100805
Alignment:
Q  563 caaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| |||||||||||||||| |||||||||||||    
T  34100848 caaaactgctacagttgcaaaacttaggggacggttttatagtt 34100805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 429 - 520
Target Start/End: Complemental strand, 41196461 - 41196370
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||| | ||||||  |||||||   |||||| |||  |||||| |||||||| ||| ||||||||||||| |||||||||    
T  41196461 taagttttgcatatgtggaagtttttgcccccaatgtcaatttagacttggtctacgctgacgtggcaccctaagtgaggtgccacatgtta 41196370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 545 - 600
Target Start/End: Original strand, 44617927 - 44617982
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||| | || ||||||||||||| |||| |||||||||||||||||||||||    
T  44617927 aaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 44617982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 8857114 - 8857220
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| |||| |||||||||||||| ||| ||||||||| |||||||  |||||||||||  |||| | ||||| || ||| | ||| ||||||| ||    
T  8857114 tacaaaaccgcctcctaagttttgcatttgtggcagttttggcccccaatgccaattttgacttggtcaacgctgatgtggcaccttaaatgaggtgcca 8857213  T
Q  514 catgtta 520  Q
    | |||||    
T  8857214 cgtgtta 8857220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 475
Target Start/End: Complemental strand, 16043269 - 16043207
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgac 475  Q
    ||||| || ||||||||| ||||||||| ||| ||||||||| |||||||| |||||||||||    
T  16043269 ctacagaaccgccccctatgttttgcatctgtggcagttttggcccccaaggccaattttgac 16043207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 19206271 - 19206205
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||| ||||||||||||| |||||| |||||    
T  19206271 accaaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagtt 19206205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 414 - 472
Target Start/End: Complemental strand, 31827779 - 31827721
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||||||| ||||||||||||||||  ||| ||||||||| |||||||| ||||||||    
T  31827779 tacaaaatcaccccctaagttttgcaactgtagcagttttggcccccaaggccaatttt 31827721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 4576673 - 4576608
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| | || ||||||||||||||||| |||||||||||| ||| || |||| |||||    
T  4576673 accaaaaattggtcttgggggccaaaactgctacagttgcaaaacttatgggacgattttgtagtt 4576608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 549 - 678
Target Start/End: Original strand, 14489404 - 14489531
Alignment:
Q  549 ttggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttag 648  Q
    |||||| || ||||||||||||| ||| ||||||||||||||||| | |||| |||||          ||| || ||||||| |||||||| ||||||||    
T  14489404 ttggccttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtt--tttttcttaggggccaaaatcgcaacttcgtgaaagttag 14489501  T
Q  649 gagacgaaaactactattaaacctaaaata 678  Q
    | | |||||||| ||||||| |||||||||    
T  14489502 ggggcgaaaactgctattaagcctaaaata 14489531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 34760973 - 34760912
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| | || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  34760973 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtt 34760912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 37431669 - 37431608
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||| |||||||||||| ||||| |||| |||||    
T  37431669 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgattttgtagtt 37431608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 344 - 468
Target Start/End: Complemental strand, 14489526 - 14489404
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    |||| |||| |||| ||||  |||| |||||||  | |||||||||||||||||||||||         |||||||||| ||||||||||||||||  ||    
T  14489526 taggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccctaag--aaaaaaactacaaaatcaccccctaagttttgcaactg 14489429  T
Q  444 tcgcagttttgacccccaagaccaa 468  Q
    | ||||||||| |||||||| ||||    
T  14489428 tggcagttttggcccccaaggccaa 14489404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 589
Target Start/End: Complemental strand, 18969225 - 18969177
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttag 589  Q
    |||||||||||||  || ||| |||||||||||||||||||||||||||    
T  18969225 accaaaaattggctttgggggtcaaaactgctacaattgcaaaacttag 18969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 466 - 510
Target Start/End: Original strand, 25092415 - 25092459
Alignment:
Q  466 caattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||| ||||| |||||||||| |||||||||||||||||    
T  25092415 caattttgactcggtcaatgctgacgtggcatcctaagtgaggtg 25092459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 4576790 - 4576683
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| | ||| |||||||||| |  ||  |||||||| ||||||   ||||||||||| ||||||| |||| ||| ||| ||||||||||||| |    
T  4576790 ctacaaaattgtcccttaagttttgcgttcgtgacagttttggcccccactgccaattttgactcggtctacgctggcgtggcaccctaagtgaggtgcc 4576691  T
Q  513 acatgtta 520  Q
    || |||||    
T  4576690 acgtgtta 4576683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 5470394 - 5470453
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||||||  |||||||||||||||||  ||| ||||||||| |||||||| ||||||||    
T  5470394 ctacaaaactgccccctaagttttgcaattgtagcagttttggcccccaaggccaatttt 5470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 600
Target Start/End: Complemental strand, 8857172 - 8857117
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||  || ||||||||||||| |||| ||||||||||||| |||||||||    
T  8857172 aaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggtttt 8857117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 520
Target Start/End: Complemental strand, 24306250 - 24306159
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||| ||||  ||||| || ||||||||  ||||||||||  | |||| ||||| ||  || |||||||||||||||||||||||    
T  24306250 taagttttgcacatgtgacagttctggcccccaaggtcaattttgacttgatctacgctgatgtgacaccctaagtgaggtgtcacatgtta 24306159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 36195701 - 36195655
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  36195701 gggccaaaactgctacagttgcaaa-cttagggggcggttttgtagtt 36195655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 37431740 - 37431787
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||| ||||||| |||||||||||| ||||||||||| |||||    
T  37431740 gggccaaaaatgctacagttgcaaaacttaaggggcggttttgtagtt 37431787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 492
Target Start/End: Complemental strand, 43741737 - 43741670
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||| || |||||| | | ||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  43741737 cccctatgtattgcatctttggcagttttgaccccctagaccaattttgactcggtcaacgctgacgt 43741670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 44297673 - 44297626
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| || ||||||||||||||| ||||| |||||    
T  44297673 gggccaaaactgctacagttacaaaacttagggggcagttttgtagtt 44297626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 548 - 606
Target Start/End: Complemental strand, 25508 - 25450
Alignment:
Q  548 attggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||| || ||| ||||||||| |||  ||||||||||||||||||||||| |||||    
T  25508 attggccttgggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtagtt 25450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 632 - 669
Target Start/End: Complemental strand, 2609117 - 2609080
Alignment:
Q  632 aacttcgtaaaagttaggagacgaaaactactattaaa 669  Q
    |||||||||||||||||| | |||||||||||||||||    
T  2609117 aacttcgtaaaagttagggggcgaaaactactattaaa 2609080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 592
Target Start/End: Original strand, 4925649 - 4925682
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggg 592  Q
    ||||||||||||||||| ||||||||||||||||    
T  4925649 gggccaaaactgctacagttgcaaaacttagggg 4925682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 5470525 - 5470586
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  || |||||||| ||||||||||| |||||    
T  5470525 aaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagtt 5470586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 473
Target Start/End: Complemental strand, 6510247 - 6510186
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagtttt-gacccccaagaccaattttg 473  Q
    |||||||| ||||||||||||||||||  ||| |||||||| | |||||||||| |||||||    
T  6510247 ctacaaaaccgccccctaagttttgcaactgtagcagttttggccccccaagactaattttg 6510186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 598
Target Start/End: Original strand, 16043210 - 16043263
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtt 598  Q
    |||||||||| || ||||||||||||| |||  |||||||| ||||||||||||    
T  16043210 aaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggtt 16043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 492
Target Start/End: Original strand, 16143826 - 16143871
Alignment:
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  16143826 cagttttggccccctagaccaattttgactcggtcaatgctgacgt 16143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 18709374 - 18709309
Alignment:
Q  542 ccaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| ||  ||||||||||||||| | ||||||||||||||||| | |||| |||||    
T  18709374 ccaaaaattggccttgttgggccaaaactgctatagttgcaaaacttagggggtgattttgtagtt 18709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 19895743 - 19895679
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || || |||||||||||| | |||||||||||| || ||| ||||||||||    
T  19895743 accaaaaattggccttg-ggaccaaaactgctatagttgcaaaacttatggtgcgattttatagtt 19895679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 25333624 - 25333563
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| ||  | |||||||||| |||  |||||||||||||||| ||||||||||||    
T  25333624 aaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttatagtt 25333563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 590
Target Start/End: Original strand, 32013248 - 32013293
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagg 590  Q
    ||||||| || || ||||||||||||||||| ||||||||||||||    
T  32013248 aaaattgaccttgagggccaaaactgctacatttgcaaaacttagg 32013293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 32969683 - 32969622
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || | ||||||||||| |||| || ||||||||||||||| |||| |||||    
T  32969683 aaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtagtt 32969622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 506
Target Start/End: Original strand, 35718712 - 35718805
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    |||||||| || ||||||  |||||||| ||| ||||||||| || ||||| ||||||||||| | ||||| | ||| || ||| |||||||||    
T  35718712 ctacaaaaccgtcccctacattttgcatctgtggcagttttggcctccaaggccaattttgactcagtctacggtgatgtggcaccctaagtga 35718805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 465 - 510
Target Start/End: Complemental strand, 36195774 - 36195729
Alignment:
Q  465 ccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  36195774 ccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 36195729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 3e-32; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 349 - 520
Target Start/End: Original strand, 3377504 - 3377675
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| ||||| |||| ||||||||||||||||||||||||||||||  | |        |||||||| ||||||||||||||||||| ||| |||    
T  3377504 ttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtggca 3377603  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||||  |  |||||||||||||||| ||||||    
T  3377604 gttttggcccccaaggccaattttgactcggtctacgctgacgtgacgccctaagtgaggtgtcatatgtta 3377675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 23220633 - 23220739
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||||| ||||||||||| |||| || |||||| |||||||||||||||||||  ||||||| |||||||| ||| ||||||||||||| |    
T  23220633 ctacaaaaccgccccttaagttttgcacatgtggcggttttggcccccaagaccaattttgattcggtctacgctgacgtggcaccctaagtgaggtgcc 23220732  T
Q  513 acatgtt 519  Q
    |||||||    
T  23220733 acatgtt 23220739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 39642455 - 39642349
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| |||||||  ||||||||||| |||||||||||||||  ||| ||||||||| ||| |    
T  39642455 ctacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagccaattttgactcggtctatgctgacgcggcaccctaagtgaagtgcc 39642356  T
Q  513 acatgtt 519  Q
    || ||||    
T  39642355 acgtgtt 39642349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 44672380 - 44672486
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||||||| ||||||||| | ||||||| |||||||||  ||||||| |||||||| ||| ||||||||| ||| ||    
T  44672380 tacaaaaccgccccctaagttttgcatatgtggcagttttggcgcccaagatcaattttgattcggtctacgctgacgtggcaccctaagtgaagtgcca 44672479  T
Q  514 catgtta 520  Q
    | |||||    
T  44672480 cgtgtta 44672486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 16874750 - 16874653
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| |||||| |||||||||||| ||| ||||||||| | |||||| ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  16874750 ctacaaaaccgccccataagttttgcatctgtggcagttttggctcccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 16874653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 17760751 - 17760858
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| | ||||||||||||||||||||| ||||||||| || |||||| |||||||||| |||||||  ||||||| ||| ||||| ||||||| |    
T  17760751 ctacaaaaccaccccctaagttttgcatatgtggcagttttggccaccaagatcaattttgactcggtctacactgacgtggcaccctaaatgaggtgcc 17760850  T
Q  513 acatgtta 520  Q
    || |||||    
T  17760851 acgtgtta 17760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 341 - 475
Target Start/End: Complemental strand, 15659313 - 15659176
Alignment:
Q  341 atataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaag--gnnnnnnnnctacaaaatcgccccctaagttttg 437  Q
    |||||||||||| |||| |||||| ||| ||||||||||||||||| |||||||| ||||||||  |        |||||||||||||||| ||||||||    
T  15659313 atataggtttaatagcagttttaagcccctaacttttccaaagttgtgattttggtcccctaagaagaaaaaaaactacaaaatcgcccccaaagttttg 15659214  T
Q  438 catatgtcgcagttttgacccccaagaccaattttgac 475  Q
    ||||||| ||  ||||| ||| ||||||||||||||||    
T  15659213 catatgtggcgattttggccctcaagaccaattttgac 15659176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 354 - 520
Target Start/End: Complemental strand, 25085696 - 25085533
Alignment:
Q  354 agcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagtttt 453  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||||||         |||||||  ||| ||| |||||||| |  ||| ||||||||    
T  25085696 agcaattttagccccctaacttttccaaagttgtgattttggcccctaag---aaaaaactacaaatccgcaccccaagttttgtacctgtggcagtttt 25085600  T
Q  454 gacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    | ||| ||||| |||||||||| |||||||  ||||||| ||| ||||||||||||| ||| |||||    
T  25085599 ggccctcaagatcaattttgacccggtctacactgacgtggcaccctaagtgaggtgccacgtgtta 25085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 344 - 510
Target Start/End: Original strand, 45738934 - 45739099
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    |||| |||| |||||||||||| || |||||||  |||||||| ||||||| |||| |||||        |||||||| |||||| |||||||||||| |    
T  45738934 taggcttaatagcaattttaactccctaactttctcaaagttgtgattttgaccccctaaggaaaaaa--ctacaaaaccgccccttaagttttgcatct 45739031  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
     | ||||||||| |||||||   |||||||||| ||||||||||| |||| ||| |||||||||||||    
T  45739032 atggcagttttggcccccaaagtcaattttgactcggtctatgctaacgtggcaccctaagtgaggtg 45739099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 345 - 519
Target Start/End: Original strand, 7579662 - 7579837
Alignment:
Q  345 aggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc--taaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    |||||||| |||| |||||||||| ||||||| | ||||||||||||||||||||  ||||         |||||||| ||||| ||||||||||||  |    
T  7579662 aggtttaatagcagttttaaccccttaactttccaaaagttgcgattttggcccccctaag-aaaaaaaactacaaaaccgcccgctaagttttgcactt 7579760  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    || ||| ||||  |||||||  | ||||||||| ||||||| |||||| | ||| ||||||||||||| ||||||||    
T  7579761 gtggcaatttttgcccccaaagctaattttgactcggtctacgctgacatggcaccctaagtgaggtgccacatgtt 7579837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 32295082 - 32295017
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| || |||||| |||||    
T  32295082 accaaaaattggccttgtgggccaaaactgctacaattgcaaaacttaggaggtggttttgtagtt 32295017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 413 - 509
Target Start/End: Complemental strand, 6569754 - 6569658
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    |||||||| |||||| |||||||| ||| ||| ||||||||| ||| |||||||||||||||  ||||||| |||||||| |||  |||||||||||    
T  6569754 ctacaaaaccgccccttaagttttacatttgtggcagttttggccctcaagaccaattttgattcggtctacgctgacgtggcactctaagtgaggt 6569658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 492
Target Start/End: Complemental strand, 8301592 - 8301513
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| || ||||||| |||||||| ||| |||||||||||||||||||||||||||||| |  |||| ||||||||    
T  8301592 ctacaaaaccgtcccctaaattttgcatctgtggcagttttgacccccaagaccaattttgactcaatctacgctgacgt 8301513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 30849477 - 30849370
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||| |||   ||||||| ||| |||| |||||||| ||  |||||||||||||||| || ||||||||||||| |    
T  30849477 ctacaaaaccgtcccctaagttttgcatctgtgatagttttggcccacaaggccaattttaacttggtctatgctgacgtaacaccctaagtgaggtgcc 30849378  T
Q  513 acatgtta 520  Q
    || |||||    
T  30849377 acgtgtta 30849370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 41997876 - 41997785
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    |||||||| ||||||| ||| ||||||||| || ||||| ||||||||||| ||||||| ||||||||  || ||||||||||||| |||||    
T  41997876 cccctaagctttgcatctgtggcagttttggcctccaaggccaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccacat 41997785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 415 - 509
Target Start/End: Original strand, 1096536 - 1096630
Alignment:
Q  415 acaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    |||||| ||||| |||||||| |||| ||| ||||||||| |||| | |  |||||||||| ||||||| |||||||| ||||||||||||||||    
T  1096536 acaaaaccgccctctaagtttcgcatctgtggcagttttggcccctagggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggt 1096630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 39642331 - 39642265
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  39642331 accaaaaattggccttggggggccaaaactgctacaattgcagaacttagggggcggttttgtagtt 39642265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 370 - 520
Target Start/End: Original strand, 48319424 - 48319577
Alignment:
Q  370 taacttttccaaagttgcgattttgg-cccctaaggnnnnnnnn--ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagacc 466  Q
    |||||||||||||||||||||||||| |||||||||          ||||| ||||||||| ||| |||||||| | |  |||||||||||||||||  |    
T  48319424 taacttttccaaagttgcgattttggtcccctaaggaaaaaaaaaactacacaatcgccccataaattttgcatctatgacagttttgacccccaaggtc 48319523  T
Q  467 aattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||| |  || | |||||||| ||||||||||||||||| ||| |||||    
T  48319524 aattttgactctatcaacgctgacgtggcatcctaagtgaggtgccacgtgtta 48319577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 3377627 - 3377566
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  3377627 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtt 3377566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 413 - 510
Target Start/End: Original strand, 18632382 - 18632479
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||| |||| ||||||||||||| |||  |||||||| |||||| || |||||||||| || |||| ||||||||| || ||||| |||||||    
T  18632382 ctacaaaattgccctctaagttttgcatttgtgacagttttggcccccaggatcaattttgactcgatctacgctgacgtaacaccctaaatgaggtg 18632479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 16545628 - 16545724
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||| |||||||||||| | |  |||||||  |||||||    ||||||||| |||||||||||||||||||| |||||||||||||    
T  16545628 tacaaaattgccccttaagttttgcatctatgacagtttttgcccccaatggtaattttgactcggtctatgctgacgtagcaccctaagtgaggtg 16545724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 14978863 - 14978970
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||  |||||||||||||||||  ||| | ||||||| |||| ||| ||||||||||   |||||| ||||| || ||| ||||||||||||| |    
T  14978863 ctacaaaactgccccctaagttttgcacctgtggtagttttggccccaaaggccaattttgaattggtctacgctgatgtggcaccctaagtgaggtgcc 14978962  T
Q  513 acatgtta 520  Q
    ||||||||    
T  14978963 acatgtta 14978970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 17760892 - 17760939
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17760892 gggccaaaactgctacaattgcaaaacttaaggggcggttttgtagtt 17760939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 417 - 520
Target Start/End: Original strand, 25486285 - 25486387
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    |||||||||| ||||||||||||| ||| || |||||| |||| |||  |||||||||| ||||||| |||||||| ||| ||||| ||||||| ||| |    
T  25486285 aaaatcgccctctaagttttgcatctgtggc-gttttggcccctaagttcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgccacgt 25486383  T
Q  517 gtta 520  Q
    ||||    
T  25486384 gtta 25486387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 50226638 - 50226531
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||| ||| ||||| ||||||||||||  ||| ||||||||| |||| ||| | ||| ||||| ||||||| |||||||| ||| ||||||||||||| |    
T  50226638 ctactaaaccgccctctaagttttgcacctgtagcagttttggccccgaaggctaatattgactcggtctacgctgacgtggcaccctaagtgaggtgcc 50226539  T
Q  513 acatgtta 520  Q
    || |||||    
T  50226538 acgtgtta 50226531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 8009796 - 8009874
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||| ||| ||| ||||||||||| |||  ||||||||||| ||||||||||||||||| || |||| ||||||||    
T  8009796 tacaaaaccgctcccgaagttttgcatctgtgacagttttgaccaccaagaccaattttgactcgttctacgctgacgt 8009874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 12961092 - 12960986
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| | ||||||| |||||||  ||| ||||||||| | || ||| ||||||||||| ||||||| ||||||||  || |||||||||| || |    
T  12961092 ctacaaaattgtcccctaaattttgcaactgtggcagttttggctccaaaggccaattttgactcggtctacgctgacgtgacaccctaagtgagatgcc 12960993  T
Q  513 acatgtt 519  Q
    |||||||    
T  12960992 acatgtt 12960986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 508
Target Start/End: Original strand, 17692724 - 17692887
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcata 441  Q
    |||||||||| ||||||||||||||| |||||||  |||||||| |||||| ||||| ||||          |||||||||||||| ||||||||||||     
T  17692724 ataggtttaatagcaattttaaccccctaactttctcaaagttgtgattttagccccctaagaaaaaaaa--tacaaaatcgccccttaagttttgcatt 17692821  T
Q  442 tgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgagg 508  Q
    ||| || ||||| | ||||||| || |||||||| | ||||| ||||||||  || |||||||||||    
T  17692822 tgtggcggttttcatccccaaggcc-attttgactcagtctacgctgacgtgacaccctaagtgagg 17692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 15659110 - 15659053
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtt 598  Q
    |||||||||||||  || |||||||||||||| || ||||||||||||||||||||||    
T  15659110 accaaaaattggctttgggggccaaaactgctccagttgcaaaacttagggggcggtt 15659053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 39642396 - 39642457
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||  || ||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  39642396 aaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtt 39642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 541 - 589
Target Start/End: Complemental strand, 49426125 - 49426077
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttag 589  Q
    |||||||||||||| || ||| |||||||||||||||||||||||||||    
T  49426125 accaaaaattggccttgagggtcaaaactgctacaattgcaaaacttag 49426077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 417 - 520
Target Start/End: Complemental strand, 16298300 - 16298197
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    ||||| |||||||| ||||||||| ||| ||||||||| | ||||| | ||||||||||  |||||| ||||||||  ||  |||||||||||| ||| |    
T  16298300 aaaattgccccctatgttttgcatctgtggcagttttggctcccaatatcaattttgacttggtctacgctgacgtgacactctaagtgaggtgccacgt 16298201  T
Q  517 gtta 520  Q
    ||||    
T  16298200 gtta 16298197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 17692888 - 17692935
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||    
T  17692888 gggccaaaacttctacaattgcaaaacttaggggacggttttgtagtt 17692935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 562 - 677
Target Start/End: Original strand, 23220767 - 23220881
Alignment:
Q  562 ccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaacta 661  Q
    |||||||||||||| ||| |||||||||||||||||||| |||||           ||| | |||||||||||||||||||||||||| | ||||||||     
T  23220767 ccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggacc-aaaatcgtaacttcgtaaaagttagggggcgaaaactg 23220865  T
Q  662 ctattaaacctaaaat 677  Q
    |||| || ||||||||    
T  23220866 ctatcaagcctaaaat 23220881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 23891771 - 23891724
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  23891771 gggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtt 23891724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 437 - 492
Target Start/End: Complemental strand, 23891858 - 23891803
Alignment:
Q  437 gcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| ||||||||| | |||||||||||||||||| ||||||| ||||||||    
T  23891858 gcatatgtggcagttttggctcccaagaccaattttgactcggtctacgctgacgt 23891803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 50401438 - 50401516
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| ||||||||||||||||||| |||  ||||||||  ||||||| ||||||||||| |||||||  |||||||    
T  50401438 ctacaaaaccgccccctaagttttgcatttgtgacagttttg-gccccaaggccaattttgactcggtctactctgacgt 50401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 3377695 - 3377761
Alignment:
Q  541 accaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| ||  ||||||||||||||| | |||||||||||||||| ||||||| |||||    
T  3377695 accaaaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtt 3377761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 6320631 - 6320709
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||| || ||||||| |||||||| ||| | ||||||||||||  |||||||||| ||| ||||||| ||||||||    
T  6320631 tacaaaaccgtcccctaaattttgcatctgtggtagttttgaccccttagaccaatttcgactcggtctacgctgacgt 6320709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 429 - 519
Target Start/End: Complemental strand, 46505401 - 46505311
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    |||||||||||| ||  |||||| || |||||||||||||||||| | |||| || | ||||||  || ||||||||||||| ||||||||    
T  46505401 taagttttgcatttgcggcagttctggcccccaagaccaattttggctcggtttacgttgacgtgacaccctaagtgaggtgccacatgtt 46505311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 428 - 506
Target Start/End: Complemental strand, 46880974 - 46880896
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    |||| |||||||| ||| ||||||||||||   ||||||||||| ||| ||||||| |||||||| ||| |||||||||    
T  46880974 ctaaattttgcatctgtagcagttttgacctgtaagaccaatttcgactcggtctacgctgacgtggcaccctaagtga 46880896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 50401496 - 50401436
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||  |||| ||||||||||||||||||||||| |||||    
T  50401496 aaaattggccttg-gggccaaaactgtcacaaatgcaaaacttagggggcggttttgtagtt 50401436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 275 - 347
Target Start/End: Complemental strand, 4949106 - 4949034
Alignment:
Q  275 atgttaggaactacattgatagtaagtggtaaaatataaagtctaaattattagtaagttgttaaaatatagg 347  Q
    |||||||  |||| ||||| |||||||||| ||||||| || | |||||| |||||| |||||||||||||||    
T  4949106 atgttagagactaaattgagagtaagtggttaaatatagagacgaaattaatagtaaattgttaaaatatagg 4949034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 430 - 510
Target Start/End: Complemental strand, 5287457 - 5287377
Alignment:
Q  430 aagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||||||||| |  |||||| |||| |||  |||||||||| ||||| | |||||||| ||| |||||||||||||    
T  5287457 aagttttgcatatgtggatgttttggccccgaaggtcaattttgactcggtccacgctgacgtggcaccctaagtgaggtg 5287377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 676
Target Start/End: Original strand, 8009990 - 8010034
Alignment:
Q  632 aacttcgtaaaagttaggagacgaaaactactattaaacctaaaa 676  Q
    |||||||||||||||||||| | |||||||||||||| |||||||    
T  8009990 aacttcgtaaaagttaggaggctaaaactactattaagcctaaaa 8010034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 545 - 605
Target Start/End: Original strand, 14978989 - 14979049
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagt 605  Q
    |||||||||| || || |||||||| ||||| |||||||| ||||||||||||||| ||||    
T  14978989 aaaattggccttggggtccaaaactactacagttgcaaaatttagggggcggttttgtagt 14979049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 46572893 - 46572998
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||| ||| ||||||| |  ||||||| |||||||||||  |||||| ||||| ||   | ||||||||||||| |    
T  46572893 ctacaaaaccgtcccctaagttttgcatttgtggcagtttgg--ccccaaggccaattttgacttggtctacgctgatgtgagaccctaagtgaggtgcc 46572990  T
Q  513 acatgtta 520  Q
    || |||||    
T  46572991 acgtgtta 46572998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 560 - 596
Target Start/End: Original strand, 48319609 - 48319645
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcgg 596  Q
    |||||||||||||||| ||||||||||||||||||||    
T  48319609 ggccaaaactgctacagttgcaaaacttagggggcgg 48319645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 819
Target Start/End: Complemental strand, 6556518 - 6556467
Alignment:
Q  768 taatctcaagggtctatttgagagggtgctacaaagttaacgactaatttgg 819  Q
    |||||||| ||||||||||||||| || || ||||||||| |||||||||||    
T  6556518 taatctcaggggtctatttgagagtgtcctgcaaagttaaagactaatttgg 6556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 12960957 - 12960910
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||| | |||||||||||||| ||||||||| |||||    
T  12960957 gggccaaaactgctatagttgcaaaacttaggaggcggttttgtagtt 12960910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 510
Target Start/End: Complemental strand, 14190843 - 14190692
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    ||||||||||||||||||| ||||||||| ||||| ||||   | |        ||||||||  |||| | ||||||||||| ||| ||||||||| ||     
T  14190843 ttttaaccccataacttttacaaagttgcaattttagccctataagaaaaaaaactacaaaaaggccctcgaagttttgcatctgtggcagttttggcct 14190744  T
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||  ||||||||||| ||||||| ||||| || |||  |||||| |||||    
T  14190743 ccaatgccaattttgactcggtctacgctgatgtggcactctaagtaaggtg 14190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 621 - 672
Target Start/End: Original strand, 16545826 - 16545877
Alignment:
Q  621 gctaaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaacct 672  Q
    |||||||||| |||||||||||||||| ||  ||||||||| ||||||||||    
T  16545826 gctaaaatcgcaacttcgtaaaagttaagaagcgaaaactattattaaacct 16545877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 41997751 - 41997704
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| | ||||||||| |||||    
T  41997751 gggccaaaactgctacagttgcaaaacttatgaggcggttttgtagtt 41997704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 520
Target Start/End: Original strand, 44436836 - 44436930
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||  |||  |||||||| ||||||||  |||||||||| || |||| ||| |||| ||| ||||||||||||| ||| |||||    
T  44436836 cccctaagttttgcacttgtgacagttttg-cccccaaggtcaattttgactcgatctacgcttacgtcgcaccctaagtgaggtgccacgtgtta 44436930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 520
Target Start/End: Complemental strand, 49426223 - 49426133
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||| ||| ||||||||| |||| | | |||||||||||  |||||| ||||||||  || ||||||| ||||||||| |||||    
T  49426223 taagttttgcatttgtggcagttttggccccaatg-ccaattttgacttggtctacgctgacgtgacaccctaagtaaggtgtcacgtgtta 49426133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 600
Target Start/End: Original strand, 1096631 - 1096692
Alignment:
Q  541 accaaaaattggccat--gcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||| |  | ||||||||||||||||| ||||||| |||||||| |||||||    
T  1096631 accaaaaattggccttcggggggccaaaactgctacagttgcaaagcttaggggacggtttt 1096692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 399
Target Start/End: Complemental strand, 5287885 - 5287835
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| |||| |||||||||| |||||||  |||||||||||||||||||||    
T  5287885 ttaatagcagttttaaccccttaactttctcaaagttgcgattttggcccc 5287835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 395
Target Start/End: Original strand, 14978800 - 14978846
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttgg 395  Q
    |||| |||| ||||| |||| ||||||||||||||||||||||||||    
T  14978800 ttaatagcagttttagccccctaacttttccaaagttgcgattttgg 14978846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 51463022 - 51462976
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  51463022 gcagttttgaccccctagaccaattttgactcggtcaacgctgacgt 51462976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 6569638 - 6569597
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  6569638 gggccaaaactgctacaattgcaaaattttaggggcggtttt 6569597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 16874691 - 16874752
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || | ||||||||||| |||  ||||||||||| ||||||||||| |||||    
T  16874691 aaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgtagtt 16874752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 661
Target Start/End: Complemental strand, 27864221 - 27864184
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaacta 661  Q
    ||||||| |||||||| |||||||||||||||||||||    
T  27864221 aaaatcgcaacttcgtgaaagttaggagacgaaaacta 27864184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 672 - 713
Target Start/End: Original strand, 40923701 - 40923742
Alignment:
Q  672 taaaatatatggacttaattgataataagtggttaaatatag 713  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  40923701 taaaatacatggacttaagtgataataagtgattaaatatag 40923742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 45739138 - 45739179
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| |||||||||||| ||||| |||||    
T  45739138 gggccaaaactgctacagttgcaaaacttatggggcagtttt 45739179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 1e-31; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 349 - 519
Target Start/End: Complemental strand, 37898028 - 37897859
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| ||||| |||| |||||||| |||||||||||||||||||||  | |        |||||||| |||||| |||||||||||||||| |||    
T  37898028 ttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgcccc-taagttttgcatatgtggca 37897930  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    |||||| || ||||||||||||||||| |||||||||||||||||||| | ||||||||| | ||||||||    
T  37897929 gttttggcctccaagaccaattttgactcggtctatgctgacgtagcaccttaagtgaggcgccacatgtt 37897859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 520
Target Start/End: Complemental strand, 27904799 - 27904623
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    |||| |||| |||| ||||| |||  |||||||| |||||||||||||||||||||  | |        |||||||| ||||||||||||||||||  ||    
T  27904799 taggcttaatagcagttttagccctctaactttttcaaagttgcgattttggccccgtaagaaaaaaaactacaaaaccgccccctaagttttgcacttg 27904700  T
Q  444 tcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    | ||||||||| |||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  27904699 tggcagttttgtcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 27904623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 12406351 - 12406180
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||||||||| |||| |||||||| |||||||| ||||||||||||||||         | |||||| ||||||||||||||| ||| ||| |||    
T  12406351 ttaatagcaattttagccccctaactttttcaaagttgagattttggcccctaagaaaaaaaaacaacaaaaccgccccctaagttttacatctgtggca 12406252  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| |||||||| ||||||||||| | ||||| |||||||| ||| ||||||||||||| ||| |||||    
T  12406251 gttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 12406180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 359 - 510
Target Start/End: Complemental strand, 3334002 - 3333851
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    ||||| |||| ||||||||||||||||||||||||||||||  | |        |||||||| ||| || |||||||||||||||| ||||||||| |||    
T  3334002 ttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaaccgctccataagttttgcatatgtggcagttttggccc 3333903  T
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||  |||||||||| ||||||| |||||||| ||| |||||||||||||    
T  3333902 ccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 3333851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 359 - 520
Target Start/End: Complemental strand, 32392020 - 32391859
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    ||||||| || |||||||| ||||||||||||||| |||||  | |        |||||||| |||||| |||||||||||| |||  ||||||||||      
T  32392020 ttttaactccctaactttttcaaagttgcgattttagccccctaagaaaaaaaactacaaaaccgccccttaagttttgcatgtgtgacagttttgacat 32391921  T
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||||||||| ||||||| |||||||| ||| ||||||||||||| |||||||||    
T  32391920 ccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacatgtta 32391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 415 - 518
Target Start/End: Original strand, 2974702 - 2974805
Alignment:
Q  415 acaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcac 514  Q
    |||||| ||||||||||||||||||| ||| ||||||||| |||||||  ||||||||||| ||||||| |||||||| ||| ||||||||||||| |||    
T  2974702 acaaaaccgccccctaagttttgcatctgtggcagttttggcccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccac 2974801  T
Q  515 atgt 518  Q
    ||||    
T  2974802 atgt 2974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 31080543 - 31080650
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| | ||||||||||||||||| ||| ||||||||| |||||||| |||||||| || |||||||||||||||| ||| ||||||||||||| |    
T  31080543 ctacaaaaccaccccctaagttttgcatctgtggcagttttggcccccaaggccaattttaactcggtctatgctgacgtggcaccctaagtgaggtgcc 31080642  T
Q  513 acatgtta 520  Q
    || |||||    
T  31080643 acgtgtta 31080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 370 - 520
Target Start/End: Complemental strand, 20630034 - 20629884
Alignment:
Q  370 taacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaat 469  Q
    ||||||||||||||||| ||||||||||||| | |        |||||||| ||||||||||||||||||| ||| | ||||||| || ||| |||||||    
T  20630034 taacttttccaaagttgtgattttggccccttaagaaaaaaaactacaaaaccgccccctaagttttgcatttgtggaagttttggcctccaggaccaat 20629935  T
Q  470 tttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| || |||| |||||||| ||| ||||||||||||| ||| |||||    
T  20629934 tttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgtta 20629884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 339 - 520
Target Start/End: Original strand, 36798163 - 36798344
Alignment:
Q  339 aaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttg 437  Q
    ||||| ||| |||| |||| |||||  ||| |||||||||||||||||| ||||||||||| ||||         |||||||| | ||||||||||||||    
T  36798163 aaataaaggcttaatagcagttttagacccttaacttttccaaagttgcaattttggccccctaagaaaaaaaaactacaaaaccaccccctaagttttg 36798262  T
Q  438 catatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||| ||| ||||||||| ||||||||||||| |||||| |||||||  ||||||| |||  |||||||||||| |||||||||    
T  36798263 catctgtggcagttttggcccccaagaccaa-tttgactcggtctacactgacgtggcactctaagtgaggtgccacatgtta 36798344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 40276276 - 40276170
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||||||| ||| |||||||||||||| | ||||||||| ||||||| ||||||||  || ||||||||||||| |    
T  40276276 ctacaaaaccgtcccctaagttttgcatatgtggcaattttgacccccaaggctaattttgacccggtctacgctgacgtgacaccctaagtgaggtgcc 40276177  T
Q  513 acatgtt 519  Q
    |||||||    
T  40276176 acatgtt 40276170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 413 - 514
Target Start/End: Original strand, 18403053 - 18403154
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||| | ||||||||||||||| | | |||||||||||||||||||||||||||||| | ||||| | |||||| ||| |||||||||||||||    
T  18403053 ctacaaaatcactccctaagttttgcatctctggcagttttgacccccaagaccaattttgactcagtctacgttgacgtggcaccctaagtgaggtgtc 18403152  T
Q  513 ac 514  Q
    ||    
T  18403153 ac 18403154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 9852853 - 9852960
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||||||||||||||||||||| ||| ||||||||| | |||||| |||||||||||  | |||| |||||||| ||| ||||||||||||| |    
T  9852853 ctacaaaatcgccccctaagttttgcatctgtggcagttttggctcccaaggccaattttgacttgatctacgctgacgtggcaccctaagtgaggtgcc 9852952  T
Q  513 acatgtta 520  Q
    || |||||    
T  9852953 acgtgtta 9852960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 22300667 - 22300774
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || ||| ||||||||| |||||| |||||||||||  ||||||||||||||||| ||||||| | |||||| ||| ||||||||||||| |    
T  22300667 ctacaaaaccgtcccttaagttttgtatatgtggcagttttgacttccaagaccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgcc 22300766  T
Q  513 acatgtta 520  Q
    ||||||||    
T  22300767 acatgtta 22300774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 26702504 - 26702609
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||  |||||||| ||||||| ||| ||||||||||||| ||    
T  26702504 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26702602  T
Q  514 catgtta 520  Q
    | |||||    
T  26702603 cgtgtta 26702609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 26972237 - 26972342
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||| ||||||||||| ||| ||||||||| |||||||||||||||||||  |||||||| ||||||| ||| ||||||||||||| ||    
T  26972237 tacaaaaccgccccc-aagttttgcatttgtggcagttttggcccccaagaccaattttgattcggtctatcctgacgtggcaccctaagtgaggtgcca 26972335  T
Q  514 catgtta 520  Q
    | |||||    
T  26972336 cgtgtta 26972342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 25910790 - 25910897
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| | ||| |||| |||||||  ||| ||||||||| ||||||||  |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  25910790 ctacaaaaccaccctctaaattttgcacctgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtc 25910889  T
Q  513 acatgtta 520  Q
    ||||||||    
T  25910890 acatgtta 25910897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 20512264 - 20512370
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||  |||||||||||||||||  ||| | |||||||||||||||||||||||||||| ||||||| ||| || | ||| ||||||||||||| ||    
T  20512264 tacaaaactgccccctaagttttgcacctgtggtagttttgacccccaagaccaattttgactcggtctacgctaacatggcaccctaagtgaggtgcca 20512363  T
Q  514 catgtta 520  Q
    | |||||    
T  20512364 cgtgtta 20512370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 427 - 520
Target Start/End: Complemental strand, 3999331 - 3999238
Alignment:
Q  427 cctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||| ||||||| ||||||||| |||||||| |||||||||||  |||||| |||||||| ||| | ||||||||||| |||||||||    
T  3999331 cctaagttttacatatgtggcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccttaagtgaggtgccacatgtta 3999238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 348 - 397
Target Start/End: Original strand, 8284157 - 8284206
Alignment:
Q  348 tttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc 397  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8284157 tttaatagcaattttaaccccataacttttccaaagttgcgattttggcc 8284206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 492
Target Start/End: Complemental strand, 19131747 - 19131668
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| ||||||||||||||||||| |||  |||||||| |||| ||| ||||||||||| ||||||| ||||||||    
T  19131747 ctacaaaaccgccccctaagttttgcatctgtgacagttttggccccgaaggccaattttgactcggtctacgctgacgt 19131668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 35166362 - 35166469
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||||||||||||||||||| |||| || |||||| ||  |||   |||||||||| ||||||| |||||| |  || ||||||||||||| |    
T  35166362 ctacaaaatcgccccctaagttttgcacatgtggcggttttggccttcaatgtcaattttgactcggtctacgctgacatgacaccctaagtgaggtgcc 35166461  T
Q  513 acatgtta 520  Q
    ||||||||    
T  35166462 acatgtta 35166469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 341 - 403
Target Start/End: Complemental strand, 40133198 - 40133136
Alignment:
Q  341 atataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag 403  Q
    |||| ||||||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  40133198 atattggtttaatagcaattttagccccctaactttcccaaagttgcgattttggcccctaag 40133136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 16132812 - 16132908
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||| ||||||||||||||||||  | | |||||||||  ||||||| |||||||||||   ||||| ||||| || |||||||||||||||||    
T  16132812 tacaaaaccgccccctaagttttgcacctatggcagttttggtccccaaggccaattttgactttgtctacgctgatgtggcatcctaagtgaggtg 16132908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 417 - 520
Target Start/End: Original strand, 39574309 - 39574409
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    |||||| ||||||||||||||||| ||  ||||||||| ||||||||||||| |||||| ||||||| ||||||||  || | ||||||| ||| |||||    
T  39574309 aaaatcaccccctaagttttgcatgtg--gcagttttggcccccaagaccaa-tttgactcggtctacgctgacgtgacaccataagtgacgtgccacat 39574405  T
Q  517 gtta 520  Q
    ||||    
T  39574406 gtta 39574409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 379 - 510
Target Start/End: Complemental strand, 30604368 - 30604237
Alignment:
Q  379 caaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcg 478  Q
    ||||||||||||||| |||||||||         |||||||| ||||||||||||||||||  ||| |||||||||  ||   || ||||||||||| |     
T  30604368 caaagttgcgattttagcccctaagaaaaaattactacaaaaccgccccctaagttttgcacctgtggcagttttgcacctgtaggccaattttgactct 30604269  T
Q  479 gtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||| |||||||| ||| |||||||||||||    
T  30604268 gtctacgctgacgtggcaccctaagtgaggtg 30604237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 28446188 - 28446253
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||  | || ||||||||||||||||| |||||||||||||||| ||||||| |||||    
T  28446188 accaaaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggttttgtagtt 28446253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 36798378 - 36798419
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  36798378 gggccaaaactgctacagttgcaaaacttagggggcggtttt 36798419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 37897829 - 37897788
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  37897829 gggccaaaacagctacaattgcaaaacttagggggcggtttt 37897788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 672 - 712
Target Start/End: Complemental strand, 683480 - 683440
Alignment:
Q  672 taaaatatatggacttaattgataataagtggttaaatata 712  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  683480 taaaatataaggacttaattgataataagtggttaaatata 683440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 624 - 672
Target Start/End: Complemental strand, 43098075 - 43098027
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaacct 672  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||    
T  43098075 aaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaaacct 43098027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 427 - 510
Target Start/End: Complemental strand, 43098260 - 43098177
Alignment:
Q  427 cctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||||||  ||| ||||||||| ||||| | | |||||||||| | ||||| |||||||| ||| |||||||||||||    
T  43098260 cctaagttttgcacctgtagcagttttggcccccgatatcaattttgactcagtctacgctgacgtggcaccctaagtgaggtg 43098177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 2974816 - 2974874
Alignment:
Q  541 accaaaaattggccat-gcgggccaaaactgctacaattgcaaaacttagggggcggtt 598  Q
    |||||||||||||| | | |||||||||||||||||  |||||||||||||||||||||    
T  2974816 accaaaaattggccttagggggccaaaactgctacaggtgcaaaacttagggggcggtt 2974874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 3333822 - 3333756
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||||| || ||||||| |||||    
T  3333822 accaaaaattggccttggggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtt 3333756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 6130385 - 6130319
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||||||||  |||||| |||||    
T  6130385 accaaaaattggccttggggggccaaaactgctacagttgcaaaacttaggggatggttttgtagtt 6130319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 12406171 - 12406106
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| ||||||||| |||| |||||||||||||||||||||||| |||||    
T  12406171 accaaaaattggccttggggggccaaaactg-tacagttgcaaaacttagggggcggttttgtagtt 12406106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 32391849 - 32391783
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||||||||| | |||| |||||    
T  32391849 accaaaaattggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtt 32391783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 19340872 - 19340831
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  19340872 gggccaaaactgctacagttgcaaaacttagggggcgatttt 19340831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 413 - 510
Target Start/End: Original strand, 24405557 - 24405653
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||  ||||||||||||| | | ||||||||| |||| | | ||||||||||| ||||||||||| |||| ||  |||||||||||||    
T  24405557 ctacaaaaccgccaactaagttttgcatctttggcagttttggcccc-atggccaattttgactcggtctatgctaacgtggctccctaagtgaggtg 24405653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 27904671 - 27904732
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| | || ||| ||||||||| |||| ||||||||||||||||||||||| |||||    
T  27904671 aaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagtt 27904732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 30603724 - 30603683
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  30603724 gggccaaaactgctacagttgcaaaacttagggggcagtttt 30603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 31080602 - 31080541
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  |||||||||||||||| |||||| |||||    
T  31080602 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtt 31080541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 31080664 - 31080729
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| |  | | ||||||||||||| ||||||||||||| |||||||||| |||||    
T  31080664 accaaaaattggccttaggaggcaaaactgctacagttgcaaaacttagagggcggttttgtagtt 31080729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 543 - 599
Target Start/End: Original strand, 9852971 - 9853027
Alignment:
Q  543 caaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttt 599  Q
    ||||||||| |  || |||||||||||| |||| |||||||||||||||||||||||    
T  9852971 caaaaattgactttgggggccaaaactgatacagttgcaaaacttagggggcggttt 9853027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 600
Target Start/End: Original strand, 21066523 - 21066583
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||| || ||| |||||||||||||| |||||||||||| || ||||||||    
T  21066523 accaaaaattggccttggggggccaaaactgctacagttgcaaaacttaaggagcggtttt 21066583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 592
Target Start/End: Original strand, 22300795 - 22300847
Alignment:
Q  541 accaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggg 592  Q
    |||||||||||||| ||  ||||||||||||||||| ||||||||||||||||    
T  22300795 accaaaaattggccttggagggccaaaactgctacagttgcaaaacttagggg 22300847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 428 - 520
Target Start/End: Original strand, 24779355 - 24779447
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||| | | | |||||||||   ||||| |||||||||||| ||||||| |||||||| ||| || ||||||| |||||| |||||    
T  24779355 ctaagttttgcctctatggcagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgtta 24779447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 592
Target Start/End: Complemental strand, 40276149 - 40276097
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggg 592  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||||||||    
T  40276149 accaaaaattggccttggggggccaaaactgctacagttgcaaaacttagggg 40276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 600
Target Start/End: Complemental strand, 2974759 - 2974704
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||  || ||||||||||||| |||  |||||||||||||||||||||||    
T  2974759 aaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggtttt 2974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 520
Target Start/End: Complemental strand, 6130461 - 6130398
Alignment:
Q  457 ccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||  |||||||||| ||||||||| ||||||  || ||||||||||||| |||||||||    
T  6130461 ccccaaggtcaattttgactcggtctatgttgacgtgacaccctaagtgaggtgccacatgtta 6130398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 399
Target Start/End: Original strand, 12406039 - 12406094
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| |||| |||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  12406039 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 12406094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 600
Target Start/End: Original strand, 12406228 - 12406283
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||| || ||||||||||||| |||  || ||||||||||||||||||||    
T  12406228 aaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggtttt 12406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 19340828 - 19340887
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagtttt-gacccccaagaccaatttt 472  Q
    ||||||||||||||||||||||||||  ||| |||||||| | ||||||||| |||||||    
T  19340828 tacaaaatcgccccctaagttttgcaactgtagcagttttggccccccaagatcaatttt 19340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 21066385 - 21066428
Alignment:
Q  356 caattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||||||| |||| |||||||||||||||| |||||||||||||    
T  21066385 caattttagccccctaacttttccaaagtttcgattttggcccc 21066428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 28446251 - 28446192
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    |||||||| || |||||||||||||||  ||| ||||||||| ||||||||| |||||||    
T  28446251 ctacaaaaccgtcccctaagttttgcaactgtagcagttttggcccccaagatcaatttt 28446192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Original strand, 19340763 - 19340817
Alignment:
Q  345 aggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||||||| |||| ||||| |||| ||||||||||||| ||||||||||| ||||    
T  19340763 aggtttaatagcagttttagccccctaacttttccaaaattgcgattttgacccc 19340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 623 - 681
Target Start/End: Complemental strand, 20629784 - 20629726
Alignment:
Q  623 taaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaacctaaaatatat 681  Q
    |||||||| ||||| || ||||||| | | |||||||| ||||||||||||||||||||    
T  20629784 taaaatcgcaactttgtgaaagttaaggggcgaaaactgctattaaacctaaaatatat 20629726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 20629947 - 20629993
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| | |||| ||||||||||||||||||||||| |||||    
T  20629947 ggccaaaacttccacaaatgcaaaacttagggggcggttttgtagtt 20629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 25364010 - 25364076
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| ||| || ||| ||||||||| ||| |||||||| |||||||||||||||| |||||    
T  25364010 accaaaaattagccttgggggaccaaaactgatactattgcaaatcttagggggcggttttgtagtt 25364076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 666
Target Start/End: Original strand, 26702672 - 26702722
Alignment:
Q  616 aaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaactactatt 666  Q
    ||||||| ||||||| |||||||||||||||||| ||| |||| |||||||    
T  26702672 aaggagccaaaatcgcaacttcgtaaaagttaggggacaaaaattactatt 26702722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 616 - 666
Target Start/End: Original strand, 26972405 - 26972455
Alignment:
Q  616 aaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaactactatt 666  Q
    ||||||| ||||||| |||||||||||||||||| ||| |||| |||||||    
T  26972405 aaggagccaaaatcgcaacttcgtaaaagttaggggacaaaaattactatt 26972455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 520
Target Start/End: Complemental strand, 34320185 - 34320087
Alignment:
Q  422 cgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||||||| ||| ||| ||||||||| |||||||   ||||||||||  ||||||  ||||||| ||| ||| |||| ||||  ||||||||    
T  34320185 cgccccctaagttttacatttgtggcagttttggcccccaaagtcaattttgacttggtctacactgacgtggcacccttagtggggtgctacatgtta 34320087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 40133034 - 40132968
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggg-gcggttttatagtt 606  Q
    |||||||||||||| ||  | ||||||| || |||||||||||||||||||| |||||||| |||||    
T  40133034 accaaaaattggccttggagaccaaaaccgccacaattgcaaaacttaggggcgcggttttttagtt 40132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 9852912 - 9852851
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || | ||||||||||| |||  |||||||||||||||||| |||| |||||    
T  9852912 aaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgattttgtagtt 9852851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 19131688 - 19131749
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| |  ||||||||||||  |||  ||||||||||||||||||||||| |||||    
T  19131688 aaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtagtt 19131749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 427 - 520
Target Start/End: Complemental strand, 19340997 - 19340904
Alignment:
Q  427 cctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||| ||| ||||||||   ||||||  ||||||||||| ||||| | | |||||| ||| ||||| ||||||| ||| |||||    
T  19340997 cctaagttttgcatctgtggcagttttagtccccaaagccaattttgactcggtcaacgttgacgtggcaccctaaatgaggtgccacgtgtta 19340904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 20629867 - 20629802
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || || ||||||||| |||| || ||||||||||||||  ||||| |||||    
T  20629867 accaaaaattggccttggggaccaaaactgttacagtttcaaaacttagggggttgttttgtagtt 20629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 35166540 - 35166491
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaa 462  Q
    |||||||||| ||||||||||||||||  ||| ||||||||| |||||||    
T  35166540 ctacaaaatcaccccctaagttttgcagctgtagcagttttggcccccaa 35166491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 8e-30; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 354 - 509
Target Start/End: Original strand, 2016799 - 2016954
Alignment:
Q  354 agcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagtttt 453  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||  || |        ||||||||  ||||||||||||||||| |||| ||||||||    
T  2016799 agcagttttagccccctaacttttccaaagttgcgattttggccctcaaagaaaaaagactacaaaactgccccctaagttttgcacatgtggcagtttt 2016898  T
Q  454 gacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    | |||||||| ||||||||||| ||||||| |||||||| ||| ||||||||||||    
T  2016899 ggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggt 2016954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 336 - 509
Target Start/End: Original strand, 51362526 - 51362702
Alignment:
Q  336 ttaaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taag--gnnnnnnnnctacaaaatcgccccctaag 432  Q
    ||||| || |||||||| || | ||||| |||| ||||||||| |||||||||||||||||||| ||||  |        |||||||| |||||||||||    
T  51362526 ttaaattaaaggtttaatagtagttttagccccctaacttttctaaagttgcgattttggccccctaagaagaaaaaaaactacaaaaccgccccctaag 51362625  T
Q  433 ttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    |||||||||||| ||||||||| |||||||||||||||||||| | |||||  ||||||| ||| ||||||||||||    
T  51362626 ttttgcatatgtggcagttttggcccccaagaccaattttgactcagtctacactgacgtggcaccctaagtgaggt 51362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 359 - 520
Target Start/End: Complemental strand, 14449586 - 14449424
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccct-aaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacc 457  Q
    ||||| |||| |||||||||||||||||||||||||||| || ||||        |||||||| ||| ||||||||||||||| ||| ||||||||| ||    
T  14449586 ttttagccccctaacttttccaaagttgcgattttggcctcttaaggaaaaaaaactacaaaaccgctccctaagttttgcatttgtggcagttttggcc 14449487  T
Q  458 cccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| ||||||||||| |||| || |||||||| ||| | ||||||||||| ||| |||||    
T  14449486 cccaaggccaattttgactcggtttacgctgacgtggcaccataagtgaggtgccacgtgtta 14449424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 44356644 - 44356538
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||  |||||| | | |||| ||| ||||||||||||||||    
T  44356644 tacaaaaccgccccctaagttttgcatatgtggcagttttggcccccaagaccaattttgacttggtctacgataacgtggcaccctaagtgaggtgtca 44356545  T
Q  514 catgtta 520  Q
    | |||||    
T  44356544 cgtgtta 44356538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 359 - 520
Target Start/End: Original strand, 2836912 - 2837073
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    |||||||||| |||||||||||||| ||||||||||||||| || |        |||||||| ||||||||||||||||||| |||   ||||||| |||    
T  2836912 ttttaaccccctaacttttccaaagctgcgattttggcccccaaagaaaaaaaactacaaaaccgccccctaagttttgcatgtgtgagagttttggccc 2837011  T
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||| ||||||||||| | |||||  ||||||| ||| ||||||||||||| ||| |||||    
T  2837012 ccaaggccaattttgactcagtctacactgacgtggcaccctaagtgaggtgccacgtgtta 2837073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 336 - 520
Target Start/End: Complemental strand, 12719770 - 12719585
Alignment:
Q  336 ttaaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagtt 434  Q
    |||||| | ||| |||| |||| |||||||||| ||||||| |||||||||  ||||||||||| ||||         |||||||| | |||||||||||    
T  12719770 ttaaaaaaaaggcttaatagcagttttaaccccctaactttcccaaagttgatattttggccccctaagaaaaaaaaactacaaaaccaccccctaagtt 12719671  T
Q  435 ttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| ||| ||||||||| || ||||||||||||||||| ||||||| ||||| || ||| || |||||||||| |||||||||    
T  12719670 ttgcatctgtggcagttttggcctccaagaccaattttgactcggtctacgctgatgtggcaccccaagtgaggtgccacatgtta 12719585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 2654216 - 2654109
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||  |||||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||| |||||||| ||| ||||||| ||| | |    
T  2654216 ctacaaaactgccccctaagttttgcatatgtggcagttttgacccccaaggccaattttgacttggtctacgctgacgtggcaccctaagtcaggagcc 2654117  T
Q  513 acatgtta 520  Q
    ||||||||    
T  2654116 acatgtta 2654109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 339 - 520
Target Start/End: Complemental strand, 1420865 - 1420684
Alignment:
Q  339 aaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttg 437  Q
    |||| |||| |||| |||| ||||| |||| ||||||| |||||||| ||||||||| ||||||||         |||||||| |||||| |||||||||    
T  1420865 aaatttaggcttaatagcagttttagccccttaactttcccaaagttacgattttggtcccctaag-aaaaagaactacaaaaccgccccataagttttg 1420767  T
Q  438 catatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||| ||| |||||| ||||||||||| ||||||||||| ||||| | |||||||| ||| ||||||||||||| ||| |||||    
T  1420766 catttgtggcagttatgacccccaaggccaattttgactcggtcaacgctgacgtggcaccctaagtgaggtgccacgtgtta 1420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 370 - 520
Target Start/End: Complemental strand, 20112439 - 20112290
Alignment:
Q  370 taacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaat 469  Q
    |||||||||||||||||||||||||||||| || |        |||||||| ||||||| ||||||||||||||| ||||||||| |||||||  |||||    
T  20112439 taacttttccaaagttgcgattttggcccccaaagaaaaata-ctacaaaaccgcccccaaagttttgcatatgtggcagttttggcccccaaagccaat 20112341  T
Q  470 tttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| ||||| | |||||||| |||  |||||||||||| ||| |||||    
T  20112340 tttgactcggtcaacgctgacgtggcactctaagtgaggtgccacgtgtta 20112290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 53312284 - 53312460
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    |||| |||| |||| ||||| |||| |||||||| ||||||||||||||||||||| ||||         |||||||| | |||||||| ||||||| ||    
T  53312284 taggcttaatagcatttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaacaaactacaaaaccaccccctaaattttgcacat 53312383  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    || ||||||||| |||||||| ||||||| ||| | ||||| |||||||| ||| ||||||||||||| ||| ||||    
T  53312384 gtggcagttttggcccccaaggccaatttggactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtt 53312460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 10059944 - 10059847
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| ||| |||| ||||||||||| ||||||| | |||||| ||| |||||||||||||    
T  10059944 ctacaaaaccgccccctaagttttgcatctgtggcagttttggccctcaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtg 10059847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 423 - 520
Target Start/End: Complemental strand, 43074825 - 43074728
Alignment:
Q  423 gccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| | ||||| |||||||| ||| ||||||||||||| ||| |||||    
T  43074825 gccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 43074728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 21597649 - 21597542
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || ||||||| |||||||||||| ||||||||| ||||||| || ||||||||| ||||||| |||||||| ||| ||||| ||||||| |    
T  21597649 ctacaaaaccgtcccctaaattttgcatatgtggcagttttggcccccaaaactaattttgactcggtctacgctgacgtggcaccctaaatgaggtgcc 21597550  T
Q  513 acatgtta 520  Q
    || |||||    
T  21597549 acgtgtta 21597542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 6637310 - 6637203
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||||||| |||||||||||| | | ||||||||| ||| |||  ||||||||||| |||||||  ||||| | ||| ||||||||||||| |    
T  6637310 ctacaaaatcgccccttaagttttgcatttctggcagttttggcccacaatgccaattttgactcggtctacactgacatggcaccctaagtgaggtgcc 6637211  T
Q  513 acatgtta 520  Q
    ||||||||    
T  6637210 acatgtta 6637203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 349 - 492
Target Start/End: Original strand, 25909490 - 25909633
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| |||||||||| ||||||||||||||||| ||||||||||||  | |        ||| |||| ||||||||||||||||||  ||| |      
T  25909490 ttaatagcagttttaaccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactataaaaccgccccctaagttttgcacttgtggag 25909589  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||| |||||||| ||||||||||| ||||||| ||||||||    
T  25909590 gttttggcccccaaggccaattttgactcggtctacgctgacgt 25909633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 29697590 - 29697695
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||| ||| |||||||||    ||||| ||||||||||| | ||||| |||||||| ||| ||||||||||||||||    
T  29697590 tacaaaaccgccccctaagttttgcatctgtggcagttttg-gttccaaggccaattttgacccagtctacgctgacgtggcaccctaagtgaggtgtca 29697688  T
Q  514 catgtta 520  Q
    | |||||    
T  29697689 cgtgtta 29697695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 51371530 - 51371636
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| ||||| |||||||||||||| | |||||||||||||||||   |||||||||| |||||||  ||||||| ||| ||||| ||||||| |    
T  51371530 ctacaaaattgccccttaagttttgcatatatggcagttttgacccccaatgtcaattttgactcggtctacactgacgtggcaccctaaatgaggtgcc 51371629  T
Q  513 acatgtt 519  Q
    || ||||    
T  51371630 acgtgtt 51371636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 31553489 - 31553392
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||||||||||||| |||| ||| | | ||||||||| |||||||| ||||||||||| ||||||| ||| |||  ||| |||||||||||||    
T  31553489 ctacaaaatcgccccctaaattttacatctatggcagttttggcccccaaggccaattttgactcggtctacgctaacgcggcaccctaagtgaggtg 31553392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 345 - 520
Target Start/End: Original strand, 16292269 - 16292442
Alignment:
Q  345 aggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgt 444  Q
    |||||||| || |||||||||||| ||| ||||  |||||||||||||||| |||| |          |||||||||||||| |||||||||||| ||||    
T  16292269 aggtttaatagtaattttaaccccctaatttttttaaagttgcgattttggtccctta--aaaaaaaactacaaaatcgccctctaagttttgcacatgt 16292366  T
Q  445 cgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
     ||||||||| ||||||     ||||||||| |||||||  ||||||| ||  ||||||||||||||||| |||||    
T  16292367 ggcagttttggcccccatatgtaattttgactcggtctacactgacgtggccccctaagtgaggtgtcacgtgtta 16292442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 356 - 519
Target Start/End: Complemental strand, 23759877 - 23759715
Alignment:
Q  356 caattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttg 454  Q
    ||||||||||||| |||||||   |||||||||||||||| ||||||||         |||||||| || ||||||||||||| || |||  ||||||||    
T  23759877 caattttaaccccttaactttcataaagttgcgattttggtcccctaag--aaaaaaactacaaaaccgtcccctaagttttgtatctgtgacagttttg 23759780  T
Q  455 acccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
     || ||||| ||||||||||| || |||| |||||||| ||| ||||||||||||| ||| ||||    
T  23759779 gcctccaaggccaattttgactcgatctaagctgacgtggcaccctaagtgaggtgccacgtgtt 23759715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 429 - 520
Target Start/End: Complemental strand, 4796271 - 4796180
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||  ||| ||||||||| ||||||| | |||||||||| ||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  4796271 taagttttgcacctgtggcagttttggcccccaaaatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgtta 4796180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 429 - 492
Target Start/End: Original strand, 27978774 - 27978837
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||| ||||||||    
T  27978774 taagttttgcatttgtggcagttttgacccccaaggccaattttgactcggtctacgctgacgt 27978837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 346 - 520
Target Start/End: Original strand, 50769363 - 50769537
Alignment:
Q  346 ggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgt 444  Q
    ||||||| |||| ||||| |||| ||||||| ||||||||||||||||| |||| ||||         |||||||| |||||| |||||||||||| | |    
T  50769363 ggtttaatagcagttttatccccctaactttcccaaagttgcgattttgcccccctaagaaaaaaaaactacaaaaccgcccc-taagttttgcatctat 50769461  T
Q  445 cgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
     ||||||||  |||| |||  |||||||||| ||| ||| |||||||||||| ||| ||||||||| ||| |||||    
T  50769462 ggcagttttagcccctaaggtcaattttgactcggcctacgctgacgtagcaccctgagtgaggtgccacgtgtta 50769537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 346 - 520
Target Start/End: Complemental strand, 53925064 - 53924891
Alignment:
Q  346 ggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgt 444  Q
    ||||||| | |||||||| || | ||||||||| |||||||||||||||| ||||||||         ||| |||||| ||||||||||||||||| |||    
T  53925064 ggtttaataacaattttagcctcctaacttttctaaagttgcgattttggtcccctaag--aaaaaaactataaaatctccccctaagttttgcatttgt 53924967  T
Q  445 cgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
      |||||||||||| ||||  |||||||||| ||||||| | ||| ||  || |||||||||| |||||| |||||    
T  53924966 gacagttttgaccctcaaggtcaattttgactcggtctacgttgatgtgacaccctaagtgagatgtcacgtgtta 53924891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 349 - 459
Target Start/End: Complemental strand, 21957778 - 21957668
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| ||||| |||| |||||||||||||||||||||||||||| |||||         |||||||| |||| |||||||||||||  ||| |||    
T  21957778 ttaatagcagttttagccccctaacttttccaaagttgcgattttggcctctaagaaaaaaaaactacaaaaccgcctcctaagttttgcaactgtagca 21957679  T
Q  449 gttttgacccc 459  Q
    |||||||||||    
T  21957678 gttttgacccc 21957668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 413 - 515
Target Start/End: Original strand, 47999596 - 47999698
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||| || |||||||| ||| ||| |||||||||||||| ||| ||||||||||  ||||||| |||||||| ||| | ||||||||||| |    
T  47999596 ctacaaaaccgctccataagttttacatctgtggcagttttgacccctaaggccaattttgattcggtctacgctgacgtggcaccttaagtgaggtgcc 47999695  T
Q  513 aca 515  Q
    |||    
T  47999696 aca 47999698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 50769547 - 50769612
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| | || ||||||||||||||||| |||||||||||||  |||||||||||||||    
T  50769547 accaaaaattggtcttgggggccaaaactgctacagttgcaaaacttagtaggcggttttatagtt 50769612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 541 - 600
Target Start/End: Original strand, 2837083 - 2837143
Alignment:
Q  541 accaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||    
T  2837083 accaaaaattggccttggagggccaaaactgctacaattgtaaaacttagggggcggtttt 2837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 343 - 516
Target Start/End: Complemental strand, 6207493 - 6207318
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag--gnnnnnnnnctacaaaatcgccccctaagttttgcat 440  Q
    ||||| |||| |||| ||||| |||| ||| ||| | ||||||| ||||||||||||||||  |        |||||||| |||||||||||||||||||    
T  6207493 ataggcttaatagcagttttagccccctaattttcctaaagttgtgattttggcccctaagaagaaaaaaaactacaaaaccgccccctaagttttgcat 6207394  T
Q  441 atgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
     ||| ||| ||||| ||||||||  ||||||||||  |||||| ||| | || |||  ||||||||| ||||||||    
T  6207393 ttgtggcaattttggcccccaaggtcaattttgacttggtctacgctaatgtggcactctaagtgagatgtcacat 6207318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 430 - 510
Target Start/End: Complemental strand, 20118133 - 20118053
Alignment:
Q  430 aagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||||||||  |||||||| |||||||||||||||||||  || |||| || ||||| ||| |||||||||||||    
T  20118133 aagttttgcatatgtgccagttttggcccccaagaccaattttgattcgatctacgcggacgtggcaccctaagtgaggtg 20118053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 340 - 510
Target Start/End: Original strand, 11824182 - 11824351
Alignment:
Q  340 aatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggc-ccctaaggnnnnnnnnctacaaaatcgccccctaagttttgc 438  Q
    |||||||| |||| |||| |||||||||| ||||||| | ||||||| ||||||||  |||||||         |||||||| |||||| ||||||||||    
T  11824182 aatataggcttaatagcagttttaaccccctaactttcctaaagttgtgattttggttccctaagaaacaaaaactacaaaaccgcccc-taagttttgc 11824280  T
Q  439 atatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    || ||| |||||||||  ||| ||| ||||||||||| | ||||| ||||| || ||| |||||||||||||    
T  11824281 atgtgtggcagttttggtccc-aaggccaattttgactcagtctacgctgatgtggcaccctaagtgaggtg 11824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 54984080 - 54983973
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||||||||||| ||||||| ||||  |||||||| | |||||   |||||||| |  |||||| |||||||| ||| ||||||||||||| |    
T  54984080 ctacaaaatcgccccctaaattttgcacatgtgtcagttttggcacccaatgtcaattttggcttggtctacgctgacgtggcaccctaagtgaggtgcc 54983981  T
Q  513 acatgtta 520  Q
     |||||||    
T  54983980 ccatgtta 54983973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 10059814 - 10059748
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  10059814 accaaaaattgaccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 10059748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 446 - 520
Target Start/End: Original strand, 49185669 - 49185743
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||| |||||||| |||||||||||  |||||| |||||||| ||| |||||| |||||| |||||||||    
T  49185669 gcagttttggcccccaaggccaattttgacttggtctacgctgacgtggcaccctaagcgaggtgccacatgtta 49185743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 343 - 504
Target Start/End: Complemental strand, 8965827 - 8965672
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    ||||| |||| ||||||||||||||| ||| |||| |||||||||||||||||||| ||||         ||| |||| ||||||||||||||||||| |    
T  8965827 ataggcttaatagcaattttaacccc-taattttttcaaagttgcgattttggccc-taag----aaaaactataaaaccgccccctaagttttgcatct 8965734  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagt 504  Q
    || |||||||||  ||||||   |||||||||| ||||||| | ||| || ||| |||||||    
T  8965733 gtggcagttttggtccccaatgtcaattttgactcggtctacgttgatgtggcaccctaagt 8965672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 10059885 - 10059946
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  10059885 aaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagtt 10059946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 425 - 490
Target Start/End: Complemental strand, 14060938 - 14060873
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgac 490  Q
    |||||||||||| ||| ||| ||||||||| |||||||| | ||||||||| ||||||||||||||    
T  14060938 cccctaagttttacatctgtggcagttttggcccccaaggctaattttgactcggtctatgctgac 14060873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 14449472 - 14449533
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||| |||||||||||||| |||||||| |||||    
T  14449472 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtt 14449533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 25909613 - 25909552
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||  | |||| |||||||||||||||||||||||||||||    
T  25909613 aaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttatagtt 25909552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 427 - 483
Target Start/End: Complemental strand, 21322944 - 21322888
Alignment:
Q  427 cctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtcta 483  Q
    ||||||||||||||||||  ||||||||||||||||  ||||||||||| |||||||    
T  21322944 cctaagttttgcatatgtgacagttttgacccccaatgccaattttgactcggtcta 21322888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 561 - 605
Target Start/End: Complemental strand, 21597511 - 21597467
Alignment:
Q  561 gccaaaactgctacaattgcaaaacttagggggcggttttatagt 605  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  21597511 gccaaaactgctacagttgcaaaacttaggggacggttttatagt 21597467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 448 - 520
Target Start/End: Original strand, 35393402 - 35393474
Alignment:
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||| |||||||| |||||||||||  | |||||||||| || ||| ||||||||||||| |||||||||    
T  35393402 agttttggcccccaagcccaattttgacttgttctatgctgatgtggcaccctaagtgaggtgccacatgtta 35393474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 649
Target Start/End: Original strand, 2181309 - 2181416
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgta 640  Q
    ||||||||||| || || |||||||||||| |||| ||||||||||||| |||| ||||| ||||||        ||||||| ||||||| |||||| ||    
T  2181309 accaaaaattgtccttgggggccaaaactgttacagttgcaaaacttagagggcagttttgtagttc-ttttcttaaggagccaaaatcgcaacttcata 2181407  T
Q  641 aaagttagg 649  Q
    |||||||||    
T  2181408 aaagttagg 2181416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 23759688 - 23759625
Alignment:
Q  543 caaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| || ||||||||||| ||||| |||||||| ||||||| ||||||| |||||    
T  23759688 caaaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggttttgtagtt 23759625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 52463034 - 52462928
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||||| |||||||||||| | |  |||||||| ||||||| ||||||||| || |||||||  |||||||  || || ||||||||||||    
T  52463034 ctacaaaa-cgccccttaagttttgcatctatgacagttttggcccccaaaaccaattttaacccggtctacactgacgtgacacccaaagtgaggtgtc 52462936  T
Q  513 acatgtta 520  Q
    || |||||    
T  52462935 acgtgtta 52462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 600
Target Start/End: Complemental strand, 53924876 - 53924817
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||  | || ||||||||||||||||| |||||||||||||||| |||||||    
T  53924876 accaaaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggtttt 53924817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 336 - 513
Target Start/End: Original strand, 1571389 - 1571562
Alignment:
Q  336 ttaaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttt 435  Q
    |||||||| ||| |||| |||| ||||||| || ||||||| | ||||||||||||||| |||||||          |||||||  |||| | || ||||    
T  1571389 ttaaaataaaggcttaatagcagttttaacaccctaactttacaaaagttgcgattttgccccctaa---ataaaaactacaaac-cgcctcatatgttt 1571484  T
Q  436 tgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||||| ||||||||| |  |||| |||||||| ||| ||| |||  ||||||| ||| ||||||||||||||||    
T  1571485 tgcatatgtggcagttttggcttccaaaaccaatttagactcggcctacactgacgtggcaccctaagtgaggtgtca 1571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 8070631 - 8070685
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag 403  Q
    |||| |||| |||||||||| |||||||||||||||||| | |||||||||||||    
T  8070631 ttaatagcagttttaaccccctaacttttccaaagttgcaactttggcccctaag 8070685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 19909176 - 19909230
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag 403  Q
    |||| |||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  19909176 ttaatagcagttttaaccccctaactttctcaaagttgcgattttggcccctaag 19909230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 446 - 492
Target Start/End: Original strand, 29775460 - 29775506
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||    
T  29775460 gcagttttgaccccctagaccaattttgactcggtcaatgctgacgt 29775506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 35384006 - 35383909
Alignment:
Q  413 ctacaaaatcgccccctaagttttgca-tatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||| |||||||| ||||||||||||| ||| | ||||||||| |||||||| ||||||||||  ||||||| | |||||| ||| | |||||||||||    
T  35384006 ctacgaaatcgcctcctaagttttgcactat-tggcagttttggcccccaaggccaattttgattcggtctacgttgacgtggcaccgtaagtgaggtg 35383909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 35393852 - 35393918
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| || |||||| |||||||||||||| |||||    
T  35393852 accaaaaattggccttggggggccaaaactgctacagttacaaaacctagggggcggttttgtagtt 35393918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 6207362 - 6207423
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||| || || ||||||||| ||| |||| ||||||||||||||||||||||| |||||    
T  6207362 aaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggttttgtagtt 6207423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 6614974 - 6614910
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| || || ||||||||||||||||| ||||||||||||||||  |||||| |||||    
T  6614974 accaaaaattgaccttg-gggccaaaactgctacagttgcaaaacttaggggatggttttgtagtt 6614910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 11983576 - 11983639
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||||||||||| |||| ||||||||||||| ||||||||||| |||||    
T  11983576 accaaaaattggccttg-gggccaaaacttctacgattgcaaaactta-ggggcggttttgtagtt 11983639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 21871695 - 21871527
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||||||||| |||| |||||||| |||||||||||||||| |||| |||          |||||||| |||| |||||||||||||| | | |     
T  21871695 ttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa----aaaaaactacaaaaccgcctcctaagttttgcatctttggt 21871600  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||| ||||||| | ||||||| || ||||||| |||||| |  ||  ||||||| |||||||| |||||    
T  21871599 agttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgtta 21871527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 21927556 - 21927388
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||||||||| |||| |||||||| |||||||||||||||| |||| |||          |||||||| |||| |||||||||||||| | | |     
T  21927556 ttaatagcaattttagccccctaactttttcaaagttgcgattttgaccccctaa----aaaaaactacaaaaccgcctcctaagttttgcatctttggt 21927461  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||| ||||||| | ||||||| || ||||||| |||||| |  ||  ||||||| |||||||| |||||    
T  21927460 agttttggcccccaaaatcaattttaactcggtctacgctgacatgacactctaagtggggtgtcacgtgtta 21927388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 51362665 - 51362604
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| | || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  51362665 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtt 51362604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 423 - 520
Target Start/End: Original strand, 54855381 - 54855477
Alignment:
Q  423 gccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||| |||||||||||| | | | |||||||  ||||||  ||||||||||| ||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  54855381 gccccttaagttttgcatct-tggtagttttggtccccaaagccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacttgtta 54855477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 349 - 397
Target Start/End: Original strand, 1420538 - 1420586
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc 397  Q
    |||| |||| ||||| |||| ||||||||||||||||||||||||||||    
T  1420538 ttaatagcagttttagccccctaacttttccaaagttgcgattttggcc 1420586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 545 - 605
Target Start/End: Complemental strand, 2016917 - 2016857
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagt 605  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||| ||||| ||||    
T  2016917 aaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagt 2016857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 562 - 606
Target Start/End: Original strand, 8965721 - 8965765
Alignment:
Q  562 ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| |||  |||||||||||||||||||||||||||||    
T  8965721 ccaaaactgccacagatgcaaaacttagggggcggttttatagtt 8965765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 559 - 603
Target Start/End: Complemental strand, 18937352 - 18937308
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttata 603  Q
    ||||||||||||||||| |||||||||||||||| || |||||||    
T  18937352 gggccaaaactgctacagttgcaaaacttaggggacgattttata 18937308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 428 - 492
Target Start/End: Complemental strand, 34567848 - 34567784
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||||| ||||||||| |||||||   |||||| ||| ||||| ||||||||||    
T  34567848 ctaagttttgcatatgtggcagttttggcccccaatgtcaatttcgactcggtcaatgctgacgt 34567784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 559 - 595
Target Start/End: Complemental strand, 54983955 - 54983919
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcg 595  Q
    |||| ||||||||||||||||||||||||||||||||    
T  54983955 gggctaaaactgctacaattgcaaaacttagggggcg 54983919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 606
Target Start/End: Complemental strand, 1420662 - 1420599
Alignment:
Q  543 caaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| |   ||||||||||| || | |||||||||||||||||||||||| |||||    
T  1420662 caaaaattggccttaaaggccaaaactgatatagttgcaaaacttagggggcggttttgtagtt 1420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 542 - 672
Target Start/End: Original strand, 3658109 - 3658239
Alignment:
Q  542 ccaaaaattggccatgcgg-gccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgta 640  Q
    ||||||||||||| || || ||||||||||||||| ||||||||||||| || | ||||| |||||         | ||| | ||||||| |||||| ||    
T  3658109 ccaaaaattggccttggggagccaaaactgctacagttgcaaaacttagaggacagttttttagtttttttcttaagggatc-aaaatcgcaacttcata 3658207  T
Q  641 aaagttaggagacgaaaactactattaaacct 672  Q
    ||||||||  |||||||||| |||||||||||    
T  3658208 aaagttagaggacgaaaactgctattaaacct 3658239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 446 - 520
Target Start/End: Complemental strand, 6615056 - 6614984
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||||||  | |||||||||||| ||||||| |||||| |  || ||||||||||||| |||||||||    
T  6615056 gcagttttgacccc--ataccaattttgactcggtctacgctgacatgacaccctaagtgaggtgccacatgtta 6614984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 11824379 - 11824434
Alignment:
Q  541 accaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggggcg 595  Q
    |||||||||||| | ||| ||||||||||| ||||| |||||||||||||||||||    
T  11824379 accaaaaattggtcttgcagggccaaaactactacagttgcaaaacttagggggcg 11824434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 14016792 - 14016899
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||||| ||||||||| || ||| ||||||||| || ||||| | |||||||||  |||||| ||||| || ||  ||| | |||||||||    
T  14016792 ctacaaaaccgccccttaagttttgtatttgtggcagttttggcctccaaggctaattttgacttggtctaggctgatgtggctcccttaatgaggtgtc 14016891  T
Q  513 acatgtta 520  Q
    || |||||    
T  14016892 acgtgtta 14016899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 14060866 - 14060819
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||| | ||||||| |||||||||||||||| |||||    
T  14060866 gggccaaaactgctatagttgcaaagcttagggggcggttttgtagtt 14060819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 18937442 - 18937391
Alignment:
Q  458 cccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    ||||||||||||||| || ||||||||||||||||  || ||||||||||||    
T  18937442 cccaagaccaatttttactcggtctatgctgacgtgccaccctaagtgaggt 18937391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 606
Target Start/End: Original strand, 21957673 - 21957716
Alignment:
Q  563 caaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||    
T  21957673 caaaactgctacagttgcaaaacttaggaggcggttttgtagtt 21957716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 349 - 400
Target Start/End: Complemental strand, 43074877 - 43074826
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccct 400  Q
    |||| |||||||||| |||| ||||||| ||||||||||||||||| |||||    
T  43074877 ttaatagcaattttagccccctaactttcccaaagttgcgattttgacccct 43074826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 600
Target Start/End: Original strand, 44356586 - 44356641
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||| | || ||||||||||||| |||  |||||||||||||||||||||||    
T  44356586 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 44356641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 675
Target Start/End: Original strand, 51362815 - 51362858
Alignment:
Q  632 aacttcgtaaaagttaggagacgaaaactactattaaacctaaa 675  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||    
T  51362815 aactttgtaaaagttaggggacgaaaactgctattaaacctaaa 51362858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 545 - 607
Target Start/End: Original strand, 1420732 - 1420794
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttc 607  Q
    |||||||||| || ||| || |||||| |||| ||||||||||| ||||||||||| ||||||    
T  1420732 aaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcggttttgtagttc 1420794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 26089653 - 26089719
Alignment:
Q  541 accaaaaattggccatg-cgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || || |||||||||| |||| ||| ||||||||||| || |||||||||||    
T  26089653 accaaaaattggccttggcgagccaaaactgttacagttgtaaaacttagggagcagttttatagtt 26089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 35615317 - 35615367
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| |||| ||||| |||| ||||||||| ||||||||||||||||||||    
T  35615317 ttaatagcagttttagccccctaacttttctaaagttgcgattttggcccc 35615367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 53061762 - 53061716
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  53061762 gcagttttgaccccctagaccaattttgactcggtcaacgctgacgt 53061716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 414 - 472
Target Start/End: Original strand, 53924814 - 53924872
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||||| || |||||||||||||||  ||| ||||||||| ||||||||| |||||||    
T  53924814 tacaaaaccgtcccctaagttttgcaactgtagcagttttggcccccaagatcaatttt 53924872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 397
Target Start/End: Complemental strand, 2017104 - 2017051
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc 397  Q
    |||| |||| |||| ||||| |||||||||||| | ||||||||||||||||||    
T  2017104 taggcttaatagcagttttagccccataactttcctaaagttgcgattttggcc 2017051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 2837025 - 2836964
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || |||||||||||   |||  ||||||||||||||||||||||| |||||    
T  2837025 aaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggttttgtagtt 2836964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 399
Target Start/End: Original strand, 14060764 - 14060809
Alignment:
Q  354 agcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||||    
T  14060764 agcagttttaaccccctaactttttcaaagttgcgattttgacccc 14060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 604
Target Start/End: Original strand, 20737436 - 20737481
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatag 604  Q
    ||||||||||||||| | |||||||| |||||||||| ||||||||    
T  20737436 gggccaaaactgctatagttgcaaaatttagggggcgattttatag 20737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 594
Target Start/End: Original strand, 43074776 - 43074825
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggc 594  Q
    |||||||||| || ||||||||||||| |||  |||||||||||||||||    
T  43074776 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggc 43074825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 8e-30; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 344 - 519
Target Start/End: Complemental strand, 51315800 - 51315625
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    |||| |||| |||| ||||| |||| ||||||| ||||||||||||||||||||||  | |        |||||||| ||||||||||||||||||  ||    
T  51315800 taggcttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcacctg 51315701  T
Q  444 tcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    | ||||||||| |||||||| ||||||||||| ||||||| |||||||| ||| ||||||||||||| ||| ||||    
T  51315700 tggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtt 51315625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 44433383 - 44433205
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc--cctaaggnnnnnnnnctacaaaatcgccccctaagttttgcat 440  Q
    ||||| |||| |||| ||||| |||| ||||||||||| ||||||||||| ||||  ||||||         |||||||| |||||||||||||||||||    
T  44433383 ataggcttaatagcagttttagccccctaacttttccacagttgcgatttcggcctccctaagaaaaaaaaactacaaaaccgccccctaagttttgcat 44433284  T
Q  441 atgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||| ||||||||| |||||||| ||||||||||| ||||||| ||||| || ||| ||||||| ||||||||| |||||    
T  44433283 atgtggcagttttggcccccaaggccaattttgacccggtctacgctgatgtggca-cctaagttaggtgtcacgtgtta 44433205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 346 - 510
Target Start/End: Complemental strand, 44586100 - 44585936
Alignment:
Q  346 ggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtc 445  Q
    ||||||| |||| ||||| |||| ||||||| ||||||||||||||||||||||  | |        |||||||| ||||||||||||||||| | |||     
T  44586100 ggtttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcttctgtg 44586001  T
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||| |||||| | ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  44586000 gcagttttggcccccacggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 44585936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 44436645 - 44436538
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||||| ||| ||||||||||||| |    
T  44436645 ctacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 44436546  T
Q  513 acatgtta 520  Q
    || |||||    
T  44436545 acgtgtta 44436538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 33329864 - 33329757
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || ||||||||| |||||| ||| ||||||||| |||||||||||||||||||| ||||||| |||||||| ||| ||||||||||||| |    
T  33329864 ctacaaaaccgtcccctaagtattgcatttgtggcagttttggcccccaagaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgcc 33329765  T
Q  513 acatgtta 520  Q
    || |||||    
T  33329764 acgtgtta 33329757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 43747527 - 43747420
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||| | | ||||||||| |||||| || |||||||||| ||||||| |||||||| ||||||||||||||||| |    
T  43747527 ctacaaaaccgccccctaagttttgcatttatggcagttttggcccccacgatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgcc 43747428  T
Q  513 acatgtta 520  Q
    || |||||    
T  43747427 acgtgtta 43747420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 48348505 - 48348400
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||||||| |||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| |||||||| |||  |||||||||||| |    
T  48348505 ctacaaaatcgccccttaagttttgcatatgtggcagttttga-ccccaagcccaattttgactcggtctacgctgacgtggcacgctaagtgaggtgcc 48348407  T
Q  513 acatgtt 519  Q
    || ||||    
T  48348406 acgtgtt 48348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 343 - 520
Target Start/End: Complemental strand, 578728 - 578553
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    |||||||||| | || ||||| || | ||||||||||||||||||||||||||||||||||         |||||||| |||||| |||||||| ||  |    
T  578728 ataggtttaatatcagttttagcctcctaacttttccaaagttgcgattttggcccctaag-aaaaaaaactacaaaaccgcccc-taagtttttcacct 578631  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    || | ||||||| |||||||| ||||||||||| |||||||||||||||| ||| |||||| |||||| ||| |||||    
T  578630 gtggtagttttggcccccaaggccaattttgactcggtctatgctgacgtggcaccctaagcgaggtgccacgtgtta 578553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 20432494 - 20432324
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttg-catatgtcg 446  Q
    |||| |||| |||||||||| ||||||||| ||||||| |||||||| ||||||||         |||||||||| |||||||||||||  ||| ||| |    
T  20432494 ttaatagcatttttaaccccctaacttttcaaaagttgtgattttggtcccctaag---aaaaaactacaaaatcaccccctaagtttttacatctgtgg 20432398  T
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||||  ||||||||||  |||||| |||||||||||| ||||||||||||| ||| |||||    
T  20432397 cagttttgacccccaaggacaattttgacttggtctacgctgacgtagcaccctaagtgaggtgccacgtgtta 20432324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 359 - 510
Target Start/End: Complemental strand, 54719296 - 54719147
Alignment:
Q  359 ttttaaccccataacttttccaaagttgcgattttggcc-cctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacc 457  Q
    |||||||||| |||||| | ||||||||||||||||||| ||||||         |||||||| |||||||||||||||||||||||  ||| |||| ||    
T  54719296 ttttaaccccctaacttattcaaagttgcgattttggcctcctaag---aaaaaactacaaaaccgccccctaagttttgcatatgtaccaggtttggcc 54719200  T
Q  458 cccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||  ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  54719199 cccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 54719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 8025028 - 8024922
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||||| |||||||||||||||||||| | ||||||| || |||||||||||||| || ||||||| ||||||||  |||||||| ||||||  ||    
T  8025028 tacaaaatcgtcccctaagttttgcatatgtggtagttttggcctccaagaccaattttaactcggtctacgctgacgtgacatcctaaatgaggtacca 8024929  T
Q  514 catgtta 520  Q
    |||||||    
T  8024928 catgtta 8024922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 28712521 - 28712628
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||||||||||||||||||||| ||| ||||||||  | |||||| |||| |||||| |||||||  ||||||| ||| ||||||||||||| |    
T  28712521 ctacaaaatcgccccctaagttttgcatctgtagcagttttagcacccaaggccaactttgactcggtctacactgacgtggcaccctaagtgaggtgcc 28712620  T
Q  513 acatgtta 520  Q
    || |||||    
T  28712621 acgtgtta 28712628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 418 - 520
Target Start/End: Original strand, 25843437 - 25843539
Alignment:
Q  418 aaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatg 517  Q
    ||||||||||||||||||||||| ||| |||||||||  ||||||| ||||||||||| | ||||| |||||||| ||| |||||| |||||| ||| ||    
T  25843437 aaatcgccccctaagttttgcatctgtggcagttttggtccccaaggccaattttgacccagtctacgctgacgtggcaccctaagcgaggtgccacgtg 25843536  T
Q  518 tta 520  Q
    |||    
T  25843537 tta 25843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 425 - 508
Target Start/End: Original strand, 54464241 - 54464324
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgagg 508  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||| ||| |||| ||| | |||||||||    
T  54464241 cccctaagttttgcatatgtggcagttttgacccccaaggtcaattttgactcggtctacgctcacgtggcaccttaagtgagg 54464324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 27178394 - 27178288
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| | ||||||||||||||||| ||| | |||||||||||||||  |||||||||||  |||||| ||||| ||  || |||| ||||||||||    
T  27178394 ctacaaaaccaccccctaagttttgcatctgtggtagttttgacccccaatgccaattttgacttggtctacgctgatgtgtcaccctacgtgaggtgtc 27178295  T
Q  513 acatgtt 519  Q
    |||||||    
T  27178294 acatgtt 27178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 343 - 520
Target Start/End: Original strand, 1938314 - 1938490
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatat 442  Q
    |||||||||| |||| |||||  ||| ||||||||| ||| |||||| ||||||||||| ||        |||||||| |||||| |||||||||||  |    
T  1938314 ataggtttaatagcagttttagtcccttaacttttctaaaattgcgactttggccccta-ggaagaaaacctacaaaaccgccccttaagttttgcacct 1938412  T
Q  443 gtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    || | ||||||| ||| |||   |||||||||| ||||||| |||||| | ||| ||||||||||||||||| |||||    
T  1938413 gtggtagttttggcccacaaagtcaattttgactcggtctacgctgacatggcaccctaagtgaggtgtcacgtgtta 1938490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 413 - 481
Target Start/End: Original strand, 38957913 - 38957981
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtc 481  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| |||||    
T  38957913 ctacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtc 38957981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 3916496 - 3916603
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||||| | ||||||||||||| ||| ||||||||| |||||||   |||||||||| |||||||  || |||| ||| ||||||||||||| |    
T  3916496 ctacaaaatcgctcactaagttttgcatctgtggcagttttggcccccaaagtcaattttgactcggtctacactaacgtggcaccctaagtgaggtgcc 3916595  T
Q  513 acatgtta 520  Q
    || |||||    
T  3916596 acgtgtta 3916603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 559 - 678
Target Start/End: Original strand, 4474272 - 4474388
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaa 658  Q
    ||||||||||||||||| ||||||||||||| |||||||||| || ||         | || || ||||||| ||||||||||||||||||||  |||||    
T  4474272 gggccaaaactgctacagttgcaaaacttagagggcggttttgtaatt---ttttttagggggccaaaatcgcaacttcgtaaaagttaggaggagaaaa 4474368  T
Q  659 ctactattaaacctaaaata 678  Q
    || |||||||||||||||||    
T  4474369 ctgctattaaacctaaaata 4474388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 28204733 - 28204626
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| ||||| ||||||||| || ||| | ||||||| || ||||  ||||||||||| |||||||  ||||||| ||||||||| |||||||||    
T  28204733 ctacaaaattgccccttaagttttgtatttgtggtagttttggcctccaatgccaattttgactcggtctacactgacgtggcatcctaattgaggtgtc 28204634  T
Q  513 acatgtta 520  Q
    || |||||    
T  28204633 acgtgtta 28204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 426 - 520
Target Start/End: Original strand, 86653 - 86747
Alignment:
Q  426 ccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||||||  ||| ||||||||| |||||||||||||||||||| || |||| |||||| | | | ||||||||||||| ||| |||||    
T  86653 ccctaagttttgcacttgtagcagttttggcccccaagaccaattttgactcgatctacgctgacatgggaccctaagtgaggtgccacgtgtta 86747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 429 - 519
Target Start/End: Original strand, 38177259 - 38177349
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    ||||||||||||||||  || ||||| |||||||| ||||||||||| |||| |  |||||||| ||| ||||||||||||| ||||||||    
T  38177259 taagttttgcatatgtgacatttttggcccccaaggccaattttgactcggtttgcgctgacgtggcaccctaagtgaggtgccacatgtt 38177349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 38957972 - 38957911
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||| ||||||||||||||||||||||| |||||    
T  38957972 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtt 38957911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 1814864 - 1814697
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||| ||||| || | |||||||||||||||| ||||||||| ||||||||         |||||||| || ||||||||||||||||     ||    
T  1814864 ttaatagcagttttagcctcctaacttttccaaagtttcgattttggacccctaag--aaaaaaactacaaaaccgtcccctaagttttgcatg----gc 1814771  T
Q  448 agttttgaccccc-aagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||| ||||| |||| |||||||||| ||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  1814770 agttttggccccctaagatcaattttgactcggtctacgctgacgtggcaccctaagtgaggtgccacgtgtta 1814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 428 - 512
Target Start/End: Original strand, 4474150 - 4474233
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||||| ||| |||||||||||||| ||||||||||||||  ||||||| |||||| |  || |||||||||||||||    
T  4474150 ctaagttttgcatttgtggcagttttgacccctaagaccaattttgattcggtctacgctgacatgaca-cctaagtgaggtgtc 4474233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 19404641 - 19404534
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||| ||| ||||||||||| ||||  |||||||| |||||||| |||||||||||   ||||| ||| ||||  || ||||||||||||| |    
T  19404641 ctacaaaatcgtcccttaagttttgcacatgtgacagttttggcccccaaggccaattttgacttagtctacgctaacgtgacaccctaagtgaggtgcc 19404542  T
Q  513 acatgtta 520  Q
    || |||||    
T  19404541 acgtgtta 19404534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 47189708 - 47189661
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||    
T  47189708 gggccaaaactgctacagttgcaaaacttaaggggcggttttatagtt 47189661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 47189841 - 47189734
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||| || |||||||||||| ||| ||||||||||||| ||||| ||||||||||   |||||  |||||||  || | |||||||||||||    
T  47189841 ctacaaaaccgctccataagttttgcatttgtggcagttttgaccctcaagatcaattttgacttcgtctacactgacgtgacaccttaagtgaggtgtc 47189742  T
Q  513 acatgtta 520  Q
    || |||||    
T  47189741 acgtgtta 47189734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 44436519 - 44436453
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||| ||||||||| || ||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  44436519 accacaaattggccttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 44436453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 86699 - 86638
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| | || |||||||||||||||||| |||||||||||||| || |||||||||||    
T  86699 aaaattggtcttgggggccaaaactgctacaagtgcaaaacttagggcgcagttttatagtt 86638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 35359067 - 35359156
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    ||||||||||||||| ||||||| |||| ||||||||| |||| ||   |||||||||| ||||||| |||||||| ||| | |||||||    
T  35359067 aaaatcgccccctaatttttgcacatgtggcagttttggcccctaatgtcaattttgactcggtctacgctgacgtggcaccttaagtga 35359156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 44433252 - 44433313
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  44433252 aaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtt 44433313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 44436586 - 44436647
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  44436586 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtt 44436647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 425 - 510
Target Start/End: Original strand, 44624703 - 44624787
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||| ||||||||| ||| |||||||||  ||| ||| ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  44624703 cccctatgttttgcatctgtggcagttttggtccc-aaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 44624787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 51315606 - 51315565
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  51315606 gggccaaaactgctacagttgcaaaacttagggggcggtttt 51315565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 51315672 - 51315733
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  51315672 aaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagtt 51315733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 560 - 668
Target Start/End: Complemental strand, 14340844 - 14340736
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaac 659  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||||         | ||  | |||||||||||||||| ||||||||| | |||||||    
T  14340844 ggccaaaactgctacaattgcaaaacttgtggggcggttttgtagtttttattcgtaggggaccaaaatcgtaacttcgtgaaagttagggggcgaaaac 14340745  T
Q  660 tactattaa 668  Q
    | |||||||    
T  14340744 tcctattaa 14340736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 413 - 513
Target Start/End: Complemental strand, 14340981 - 14340881
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| | |||||||||||||||| ||| ||||||||| |||||||  | ||||||||| ||||||| ||| || | |||   |||||||||||||    
T  14340981 ctacaaaatagtcccctaagttttgcatttgtggcagttttggcccccaacgctaattttgactcggtctacgctaacatggcaggttaagtgaggtgtc 14340882  T
Q  513 a 513  Q
    |    
T  14340881 a 14340881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 38958028 - 38958094
Alignment:
Q  541 accaaaaattggcc--atgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||  ||| ||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  38958028 accaaaaattggccttatg-gggtcaaaactgctacagttgcaaaacttagggggcggttttgtagtt 38958094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 15978894 - 15978941
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||    
T  15978894 gggccaaaactgctatagttgcaaaacttagggggcggttttgtagtt 15978941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 25154383 - 25154430
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  25154383 gggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtt 25154430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 27178268 - 27178143
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgta 640  Q
    |||||||||||||| || ||||||||| ||||| | ||||||||||||||| |||||||| |||||         | || ||  |||||| |||||||||    
T  27178268 accaaaaattggccttg-gggccaaaattgctatatttgcaaaacttagggtgcggttttgtagttatttttcttagggggc-caaatcgcaacttcgta 27178171  T
Q  641 aaagttaggagacgaaaactactattaa 668  Q
    ||||||||| |||||||||| |||||||    
T  27178170 aaagttaggggacgaaaactgctattaa 27178143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 28944095 - 28944154
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||| ||| ||||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  28944095 ctacataattgccccctaagttttgcacatgtagcagttttggcccccaaggccaatttt 28944154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 54719102 - 54719055
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  54719102 gggccaaaactgctacagttgcaaaacttagaggacggttttatagtt 54719055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 791443 - 791382
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttata 603  Q
    |||||||||||||| || ||||||||| || |||||||||||||| |||||| ||||||||||    
T  791443 accaaaaattggccttg-gggccaaaattgatacaattgcaaaacataggggacggttttata 791382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 28712709 - 28712663
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccc 459  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||    
T  28712709 ctacaaaatcgccccctaagttttgcaactgtagcagttttgacccc 28712663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 544 - 594
Target Start/End: Complemental strand, 28944155 - 28944105
Alignment:
Q  544 aaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggc 594  Q
    ||||||||||| || |||||||||||||||||  |||||||||||||||||    
T  28944155 aaaaattggccttgggggccaaaactgctacatgtgcaaaacttagggggc 28944105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 44433186 - 44433120
Alignment:
Q  541 accaaaaattggccatgcg-ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || | |||||||||||||| | ||||||||| |||||||||||||| |||||    
T  44433186 accaaaaattggccttgggaggccaaaactgctatagttgcaaaacctagggggcggttttttagtt 44433120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 340 - 461
Target Start/End: Original strand, 50802653 - 50802773
Alignment:
Q  340 aatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgc 438  Q
    |||||| | |||| |||| |||||||| | ||||||||||||||||| |||||||| ||||||||         ||||||||   |||||||||||||||    
T  50802653 aatataagcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaag--aaaaaaactacaaaactaccccctaagttttgc 50802750  T
Q  439 atatgtcgcagttttgaccccca 461  Q
    | |||| ||||||||||||||||    
T  50802751 acatgtggcagttttgaccccca 50802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 340 - 461
Target Start/End: Complemental strand, 50873224 - 50873104
Alignment:
Q  340 aatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaaggnnnnnnnnctacaaaatcgccccctaagttttgc 438  Q
    |||||| | |||| |||| |||||||| | ||||||||||||||||| |||||||| ||||||||         ||||||||   |||||||||||||||    
T  50873224 aatataagcttaatagcagttttaacctcttaacttttccaaagttgtgattttggccccctaag--aaaaaaactacaaaactaccccctaagttttgc 50873127  T
Q  439 atatgtcgcagttttgaccccca 461  Q
    | |||| ||||||||||||||||    
T  50873126 acatgtggcagttttgaccccca 50873104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 417 - 520
Target Start/End: Original strand, 52008313 - 52008418
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagtttt--gacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcac 514  Q
    ||||| |||| |||| |||||||||||| ||||||||  | |||| || |  ||||||||| ||||||| ||||||||  || |||||||||||||||||    
T  52008313 aaaattgccctctaatttttgcatatgtggcagttttttggcccctaaaattaattttgactcggtctacgctgacgtgacaccctaagtgaggtgtcac 52008412  T
Q  515 atgtta 520  Q
     |||||    
T  52008413 gtgtta 52008418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 1814678 - 1814613
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || |||| |||||||||| | |||||||||||| |||| |||||| |||||    
T  1814678 accaaaaattggccttgggggcaaaaactgctatagttgcaaaacttaaggggtggttttgtagtt 1814613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 427 - 520
Target Start/End: Complemental strand, 7218384 - 7218291
Alignment:
Q  427 cctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||| ||| ||| ||||||||| ||||||||  ||||||||||  | |||||||||||||  || | ||||||||||| ||| |||||    
T  7218384 cctaagttttacatctgtggcagttttggcccccaaggtcaattttgacttgatctatgctgacgtgacaccttaagtgaggtgccacgtgtta 7218291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 8024886 - 8024845
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| ||||||||| ||||||||||||||    
T  8024886 gggccaaaactgctacagttgcaaaacgtagggggcggtttt 8024845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 28712647 - 28712711
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| || || ||| ||||||||||||| ||||||||||||||||||| |||| |||||    
T  28712647 accaaaaattgtccctg-gggtcaaaactgctacagttgcaaaacttagggggcgattttgtagtt 28712711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 520
Target Start/End: Complemental strand, 36687918 - 36687731
Alignment:
Q  337 taaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgatttt-ggcccct---aaggnnnnnnnnctacaaaatcgccccctaag 432  Q
    |||||||||||||||| |||| ||||| |||  ||| |||||||||||||||||||| | |||||   |||         |||||||||  | |||||||    
T  36687918 taaaatataggtttaatagcagttttagcccattaatttttccaaagttgcgattttagtcccctaagaagaaaaaaaacctacaaaatttcaccctaag 36687819  T
Q  433 ttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
     ||||||| ||| ||| ||||| || ||||   |||||||||| |||| || |||||||| ||| ||||||||||||| ||| |||||    
T  36687818 atttgcatttgtggcaattttggcctccaatgtcaattttgactcggtttacgctgacgtggcaccctaagtgaggtgccacgtgtta 36687731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 44585974 - 44586035
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||   |||||||||||||||||||||| |||||    
T  44585974 aaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgtagtt 44586035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 36677839 - 36677783
Alignment:
Q  337 taaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgatttt 393  Q
    |||||||||||||||| |||| ||||| ||||  || ||||||||||||||||||||    
T  36677839 taaaatataggtttaatagcagttttaccccctaaatttttccaaagttgcgatttt 36677783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 541 - 672
Target Start/End: Complemental strand, 43747409 - 43747278
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgt 639  Q
    |||||||||||| | || ||| |||||||||||||||||||||||||||  ||||| |||| |||||         | || || ||||||| ||||||||    
T  43747409 accaaaaattggtcttggggggccaaaactgctacaattgcaaaacttattgggcgattttgtagtt-tttttcttagggggccaaaatcgcaacttcgt 43747311  T
Q  640 aaaagttaggagacgaaaactactattaaacct 672  Q
    ||||||||   |||||||||| |||||||||||    
T  43747310 aaaagttataggacgaaaactgctattaaacct 43747278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 424 - 520
Target Start/End: Original strand, 46226775 - 46226871
Alignment:
Q  424 ccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||| ||||||||  ||| ||||||||| ||||| |  |||||||| || |||| || |||||||| ||| ||||||||||||| ||| |||||    
T  46226775 ccccctatgttttgcacctgtggcagttttggcccccgatgccaattttaactcggtatacgctgacgtggcaccctaagtgaggtgccacgtgtta 46226871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 36677758 - 36677651
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||  | ||||||| ||||||| ||| ||| ||||| || |||||  |||||||||| |||| || |||||||| ||| | ||||||||||| |    
T  36677758 ctacaaaatttcaccctaagatttgcatttgtggcaattttggcctccaaggtcaattttgactcggtttacgctgacgtggcaccttaagtgaggtgcc 36677659  T
Q  513 acatgtta 520  Q
    || |||||    
T  36677658 acgtgtta 36677651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 43747482 - 43747529
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| | || ||||||||||||||||||||||| |||||    
T  43747482 gggccaaaactgccataaatgcaaaacttagggggcggttttgtagtt 43747529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 520
Target Start/End: Original strand, 53184596 - 53184682
Alignment:
Q  433 ttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||| ||| ||||||||| || |||| |||||||||||| ||||||| |||||| |  || ||||||||| ||||||| |||||    
T  53184596 ttttgcatttgtggcagttttg-cctccaaaaccaattttgactcggtctacgctgacttgacaccctaagtgatgtgtcacgtgtta 53184682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 562 - 600
Target Start/End: Original strand, 86768 - 86806
Alignment:
Q  562 ccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||| |||||||||||||| |||||||||    
T  86768 ccaaaactgctacagttgcaaaacttaggaggcggtttt 86806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 560 - 606
Target Start/End: Complemental strand, 12759618 - 12759573
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||||| |||||||||||| ||||||||||| |||||    
T  12759618 ggccaaaactgctacagttgcaaaactta-ggggcggttttgtagtt 12759573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 623 - 673
Target Start/End: Original strand, 14349374 - 14349424
Alignment:
Q  623 taaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaaccta 673  Q
    |||||||| |||||||||||||||||| | |||||||| ||||||| ||||    
T  14349374 taaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagccta 14349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 14856869 - 14856815
Alignment:
Q  345 aggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||||||| |||| || ||||||| ||||||| |||||| |||||||||||||||    
T  14856869 aggtttaatagcagttataaccccctaactttcccaaagatgcgattttggcccc 14856815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 560 - 606
Target Start/End: Complemental strand, 15976348 - 15976302
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| |||| ||||||||||||||| | |||||||||||    
T  15976348 ggccaaaactgccacaagtgcaaaacttaggggacagttttatagtt 15976302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 399
Target Start/End: Original strand, 22494556 - 22494606
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| ||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  22494556 ttaatagcaattttaaccccctaaattttccaaagttacgattttgacccc 22494606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 25248870 - 25248936
Alignment:
Q  541 accaaaaattggccat-gcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| | | ||||||||||||||||| ||||||||||||  |||||| ||| |||||    
T  25248870 accaaaaattggccctagggggccaaaactgctacagttgcaaaacttaaagggcggatttgtagtt 25248936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 28204608 - 28204542
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||| |||| |||||||||| |||| |||||    
T  28204608 accaaaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagtt 28204542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 33447185 - 33447139
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||| |||||||||||||| ||||| | ||||||||    
T  33447185 gcagttttgaccccctagaccaattttgactcggtcaacgctgacgt 33447139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 448 - 510
Target Start/End: Complemental strand, 36567086 - 36567024
Alignment:
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||| |||||||| || |||||||| ||||| | |||||||| ||| |||||||||||||    
T  36567086 agttttggcccccaaggccgattttgactcggtcaacgctgacgtggcaccctaagtgaggtg 36567024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 38958092 - 38958046
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccc 459  Q
    |||||||| ||||||||||||||||||  ||| ||||||||||||||    
T  38958092 ctacaaaaccgccccctaagttttgcaactgtagcagttttgacccc 38958046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 564 - 606
Target Start/End: Complemental strand, 44585894 - 44585852
Alignment:
Q  564 aaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| |||||||| ||||||||||||||| |||||    
T  44585894 aaaactgctacagttgcaaaatttagggggcggttttgtagtt 44585852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 3192984 - 3193025
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||| |||| |||||||||||||||| |||||||    
T  3192984 gggccaaaactgttacagttgcaaaacttaggggtcggtttt 3193025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 396
Target Start/End: Complemental strand, 7218472 - 7218419
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggc 396  Q
    |||||||||| |||||||||| |||| ||| ||||  |||||||||||||||||    
T  7218472 ataggtttaatagcaattttagccccctaatttttttaaagttgcgattttggc 7218419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 14992733 - 14992692
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| |||||||||||| || ||||||||    
T  14992733 gggccaaaactgctacagttgcaaaacttaaggtgcggtttt 14992692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 33329805 - 33329866
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| | || ||||||||||||| |||| ||||| ||||||||| ||||||| |||||    
T  33329805 aaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacggttttgtagtt 33329866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 38177187 - 38177236
Alignment:
Q  355 gcaattttaaccccataacttttccaaagttgcgattttgg-cccctaag 403  Q
    ||||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  38177187 gcaattttagccccttaactttcccaaagttgcgattttggccccctaag 38177236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 506
Target Start/End: Complemental strand, 43586808 - 43586715
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    ||||||||||| | |||| ||||||||| |||  ||||| || ||||  | ||||||||||||  |||||| |||||||| ||| |||||||||    
T  43586808 ctacaaaatcgtctcctatgttttgcatttgtgacagttatggcccctgataccaattttgacttggtctacgctgacgtggcaccctaagtga 43586715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 459 - 520
Target Start/End: Original strand, 44127461 - 44127522
Alignment:
Q  459 ccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||| ||||||||||  ||||||| |||||||| ||||||||||| ||||| ||| |||||    
T  44127461 ccaaggccaattttgattcggtctaagctgacgtggcatcctaagtaaggtgccacgtgtta 44127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 44624814 - 44624879
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| || ||  |||| ||||||||||| |||||||||||||  ||||||||| |||||    
T  44624814 accaaaaattgaccttggaggccgaaactgctacagttgcaaaacttagatggcggttttgtagtt 44624879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 492
Target Start/End: Original strand, 49001811 - 49001856
Alignment:
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||||||||| |||||||||||||| ||||| | ||||||||    
T  49001811 cagttttgaccccctagaccaattttgactcggtcaacgctgacgt 49001856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 54719185 - 54719246
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||  || |||||||| ||| ||||  ||||||||||||||||||||||| |||||    
T  54719185 aaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgtagtt 54719246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 2e-27; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 344 - 520
Target Start/End: Complemental strand, 28786073 - 28785895
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag--gnnnnnnnnctacaaaatcgccccctaagttttgcata 441  Q
    |||| |||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||  |        ||||||||  ||||| ||||||||||||     
T  28786073 taggcttaatagcagttttaaccccataacttttccaaagttgtgattttggcccttaagaagaaaaaaaactacaaaactgccccataagttttgcatt 28785974  T
Q  442 tgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    | | |||||||||||||||||| | ||||||||| ||||||| ||||||||  || ||||||||||||| ||| |||||    
T  28785973 tatggcagttttgacccccaaggctaattttgactcggtctacgctgacgtgacaccctaagtgaggtgccacgtgtta 28785895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 36580522 - 36580415
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| |||||||   |||||||||| ||||||| |||||||| ||| ||||| |||||||||    
T  36580522 ctacaaaaccgccccctaagttttgcatttgtggcagttttggcccccaaagtcaattttgactcggtctacgctgacgtggcaccctaaatgaggtgtc 36580423  T
Q  513 acatgtta 520  Q
    || |||||    
T  36580422 acgtgtta 36580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 413 - 509
Target Start/End: Original strand, 18504310 - 18504406
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    |||||||| ||||||||||||||||||||||| ||||||||| || | ||| ||||||||||| | ||||| |||||||| ||| ||||||||||||    
T  18504310 ctacaaaaccgccccctaagttttgcatatgtggcagttttggcctctaaggccaattttgactcagtctacgctgacgtggcaccctaagtgaggt 18504406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 370 - 512
Target Start/End: Original strand, 20184940 - 20185082
Alignment:
Q  370 taacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaa 468  Q
    |||||||||||||||||||||||| ||||| ||||         |||||||| |||| | ||||||||||||||||  |||||||| ||||||||  |||    
T  20184940 taacttttccaaagttgcgattttagccccctaagaaaaaaaaactacaaaaccgcctcttaagttttgcatatgtgccagttttggcccccaaggtcaa 20185039  T
Q  469 ttttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||| ||||||| ||||| |||||| |||||||||||||||    
T  20185040 ttttgactcggtctacgctgatgtagca-cctaagtgaggtgtc 20185082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 344 - 519
Target Start/End: Original strand, 4049704 - 4049882
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnn--ctacaaaatcgccccctaagt-tttgcat 440  Q
    ||||||||| |||| ||||| |||  ||||||||| ||||||||||||||||||||| | |          |||||||| ||  |||||||| |||||||    
T  4049704 taggtttaacagcagttttagcccactaacttttctaaagttgcgattttggccccttaagaaaaaaaaaactacaaaaccgttccctaagtctttgcat 4049803  T
Q  441 atgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
     ||| ||||||||||||| |||| ||||||||||| || |||| |||||||| ||| ||||||||||||| ||| ||||    
T  4049804 ctgtggcagttttgaccctcaaggccaattttgactcgatctacgctgacgtggcaccctaagtgaggtgccacgtgtt 4049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 15107239 - 15107132
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||| ||||||||||||||| ||| ||||||||| || ||||  ||||||||||| |||||||  |||| || ||| ||||||||||||| |    
T  15107239 ctacaaaaccgctccctaagttttgcatttgtggcagttttggcctccaatgccaattttgactcggtctacactgatgtggcaccctaagtgaggtgcc 15107140  T
Q  513 acatgtta 520  Q
    ||||||||    
T  15107139 acatgtta 15107132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 425 - 520
Target Start/End: Original strand, 36903341 - 36903436
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||| ||| ||| ||||||||| ||| |||| ||||||||||| ||||||| |||||| | ||| ||||||||||||| |||||||||    
T  36903341 cccctaagttttccatctgtggcagttttggccctcaaggccaattttgactcggtctacgctgacatggcaccctaagtgaggtgccacatgtta 36903436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 343 - 513
Target Start/End: Original strand, 41243641 - 41243809
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcata 441  Q
    ||||| |||| |||| ||||| |||| |||||||||||||||||| ||||| ||||| ||||         |||||||| |||||| ||||||||||||     
T  41243641 ataggcttaatagcagttttagccccctaacttttccaaagttgcaattttagccccctaag--aaaaaaactacaaaaccgcccc-taagttttgcatt 41243737  T
Q  442 tgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||| ||||||||   ||||||| ||||||||||| ||||||| | |||||| ||| ||||||||||||||||    
T  41243738 tgtggcagtttttgtccccaaggccaattttgactcggtctacgttgacgtggcaccctaagtgaggtgtca 41243809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 6726501 - 6726405
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||| |||||||||||||||| |||| ||||||||| ||||||||  |||||||||| | || || |||||||| ||| |||||||||||||    
T  6726501 ctacaaaatcaccccctaagttttgcacatgtggcagttttg-cccccaaggacaattttgactcagtttacgctgacgtggcaccctaagtgaggtg 6726405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 15348141 - 15348206
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  15348141 accaaaaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtt 15348206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 347 - 510
Target Start/End: Complemental strand, 18186765 - 18186601
Alignment:
Q  347 gtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtc 445  Q
    |||||| |||| ||||| |||| |||||||||||||||| |||||||| |||| ||||         ||| |||| || ||| |||||||||||| |||     
T  18186765 gtttaatagcagttttagccccctaacttttccaaagttacgattttgaccccctaagaaaaaaaaactataaaaccgtcccttaagttttgcatctgtg 18186666  T
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||  ||||||| ||||||||||| | ||||| | |||||| ||| |||||||||||||    
T  18186665 gcagttttggtccccaaggccaattttgactcagtctacgttgacgtggcaccctaagtgaggtg 18186601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 349 - 519
Target Start/End: Original strand, 28472393 - 28472560
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||| ||||| |||| ||||||||||||||||||||||||| |||| ||||         ||||||||||||||  |||||||||| ||||| ||    
T  28472393 ttaatagcagttttagcccc-taacttttccaaagttgcgattttgaccccctaag---aaaaaactacaaaatcgccctataagttttgcttatgtggc 28472488  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    ||||||  |||||||||||||||||||  ||||||| | ||||||  || ||| | ||||||| ||||||||    
T  28472489 agttttcgcccccaagaccaattttgattcggtctacgttgacgtgacaccctgaatgaggtgccacatgtt 28472560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 5172707 - 5172773
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  5172707 accaaaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 5172773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 429 - 519
Target Start/End: Original strand, 8073957 - 8074047
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||  ||||||  |||||||| |||  |||||||||||| ||| ||||    
T  8073957 taagttttgcatatgtggcagttttggcccccaaggccaattttgattcggtcttcgctgacgtggcactctaagtgaggtgccacgtgtt 8074047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 36580403 - 36580338
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| ||  |||||||||||||||| |||||||||||||||| ||||||| |||||    
T  36580403 accaaaaattggccttggtggccaaaactgctacagttgcaaaacttaggggacggttttgtagtt 36580338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 413 - 489
Target Start/End: Original strand, 28350183 - 28350259
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctga 489  Q
    |||||||| |||||||||||||||||   ||| ||||||||| |||||||||||||||||||| || |||| |||||    
T  28350183 ctacaaaaccgccccctaagttttgcccctgtggcagttttggcccccaagaccaattttgactcgatctacgctga 28350259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 15029128 - 15029206
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||||  |||||||||| | ||| ||||||||||    
T  15029128 ctacaaaaccgccccctaagttttgcacatgtggcagttttggcccccaaggtcaattttgactc-gtccatgctgacgt 15029206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 425 - 520
Target Start/End: Original strand, 15348029 - 15348124
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||| ||| | |||| || ||||||||  |||||||||| ||||||| ||||| || ||| ||||||||||||  |||||||||    
T  15348029 cccctaagttttgcatctgtggaagttatggcccccaaggtcaattttgactcggtctacgctgatgtggcaccctaagtgaggttccacatgtta 15348124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 23826086 - 23826165
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||||||| || ||| |||||||| ||| ||||||||| ||||||||| |||||||||  ||||||| ||||||||    
T  23826086 ctacaaaatcgctccttaaattttgcatttgtggcagttttggcccccaagatcaattttgattcggtctacgctgacgt 23826165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 4049905 - 4049971
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||||||| |||||||||||||||| |||||    
T  4049905 accaaaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtt 4049971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 44312988 - 44312883
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||  ||| |||||||||||||| |||  |||||||| |  | ||||||||||||||| |||||||||||||| |  || ||||||||||||| ||    
T  44312988 tacaaaactgcctcctaagttttgcatttgtgacagttttggcttc-aagaccaattttgactcggtctatgctgacatgtcaccctaagtgaggtgcca 44312890  T
Q  514 catgtta 520  Q
    |||||||    
T  44312889 catgtta 44312883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 549 - 606
Target Start/End: Complemental strand, 14247415 - 14247358
Alignment:
Q  549 ttggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||| || ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  14247415 ttggccctgggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtt 14247358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 370 - 520
Target Start/End: Original strand, 35250143 - 35250292
Alignment:
Q  370 taacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaat 469  Q
    |||||||||||||||||||||||||| |||| | |        ||| |||| ||||| ||||||||||||| | |  ||||||||  ||||||| |||||    
T  35250143 taacttttccaaagttgcgattttggtcccttaagaaaaaaa-ctataaaaccgccctctaagttttgcatctttgacagttttggaccccaaggccaat 35250241  T
Q  470 tttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| |||||||  ||||||| ||| | ||||||||||| ||| |||||    
T  35250242 tttgactcggtctacactgacgtggcaccttaagtgaggtgccacgtgtta 35250292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 6792112 - 6792052
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttgg-cccctaag 403  Q
    ||||||||| |||| ||||| |||| |||||||||||||||||||||||||| ||||||||    
T  6792112 taggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaag 6792052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 3381929 - 3381975
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccc 459  Q
    |||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  3381929 ctacaaaaccgccccctaagttttgcatatgtggcagttttggcccc 3381975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 559 - 668
Target Start/End: Original strand, 8074076 - 8074186
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatag-ttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaa 657  Q
    ||||||||||||||||| ||||||||||| |||| ||||||| ||| ||         | || ||||||||||||||||||| ||||||||| | |||||    
T  8074076 gggccaaaactgctacagttgcaaaactttggggacggttttgtagtttttttttcttatggggctaaaatcgtaacttcgtgaaagttagggggcgaaa 8074175  T
Q  658 actactattaa 668  Q
    ||| |||||||    
T  8074176 actgctattaa 8074186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 17876237 - 17876315
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||  ||||||||| |||||||| ||| || |||||| || ||||| ||||||||||| || |||||||||||||    
T  17876237 tacaaaactgccccctaaattttgcatctgtggcggttttggcctccaaggccaattttgactcgatctatgctgacgt 17876315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 560 - 674
Target Start/End: Complemental strand, 18186550 - 18186436
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaac 659  Q
    |||||||||||||| | |||||||||||||| ||||||||| |||||         ||   || ||||||| |||||| ||||||||||| | |||||||    
T  18186550 ggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttcttaaaaggccaaaatcgcaacttcataaaagttagggggcgaaaac 18186451  T
Q  660 tactattaaacctaa 674  Q
     ||||||||||||||    
T  18186450 cactattaaacctaa 18186436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 18504424 - 18504490
Alignment:
Q  541 accaaaaattggccatgcg-ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||  || | ||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  18504424 accaaaaattggcattgggaggccaaaactgctacaattgcaaaacttaagggacggttttttagtt 18504490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 370 - 520
Target Start/End: Complemental strand, 21505907 - 21505758
Alignment:
Q  370 taacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaat 469  Q
    |||||||| |||||||||||||||||||||  | |        ||||||||  |||||||| | ||||||||| | ||||||||| | |||||| ||| |    
T  21505907 taactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccccctatgctttgcatatatggcagttttggctcccaaggcca-t 21505809  T
Q  470 tttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| | ||||| | ||||||  || ||||||||||||||||| |||||    
T  21505808 tttgactcagtctacgttgacgtgacaccctaagtgaggtgtcacgtgtta 21505758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 616 - 670
Target Start/End: Original strand, 23746153 - 23746207
Alignment:
Q  616 aaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaac 670  Q
    |||| |||||||||| |||||||||||||||||| ||||||| || |||||||||    
T  23746153 aaggggctaaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaaac 23746207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 28785888 - 28785822
Alignment:
Q  541 accaaaaattggccat-gcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| | | ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  28785888 accaaaaattggcctttgtgggccaaaactacaacagttgcaaaacttagggggcggttttgtagtt 28785822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 29834397 - 29834291
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| ||||||||||||||||||  |||  || ||||  ||||||||  |||||| ||| ||||| | ||||||||  || ||||||||||||| ||    
T  29834397 tacaaaaccgccccctaagttttgcacctgtgacaattttctcccccaaggtcaatttagactcggtccacgctgacgtgacaccctaagtgaggtgcca 29834298  T
Q  514 catgtta 520  Q
    |||||||    
T  29834297 catgtta 29834291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 349 - 490
Target Start/End: Original strand, 47909697 - 47909837
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc-taaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||| ||||| |||| ||||||| |||||||||||||||| ||||| ||||         |||||||||||||||||||||||||||| ||| ||    
T  47909697 ttaatagcagttttagccccctaactttcccaaagttgcgattttagccccctaag--aaaaaaactacaaaatcgccccctaagttttgcatctgtggc 47909794  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgac 490  Q
    | ||||| |   ||||  |||||||||| ||||||| ||||||    
T  47909795 aattttggctttcaaggtcaattttgactcggtctacgctgac 47909837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 417 - 510
Target Start/End: Original strand, 5172582 - 5172675
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||| |||| ||||||||||||| ||| ||||||||  | ||||| ||||||| |||| ||||||| | |||| | ||| |||||||||||||    
T  5172582 aaaattgccctctaagttttgcatctgtggcagttttagctcccaaaaccaattatgactcggtctacgttgacattgcaccctaagtgaggtg 5172675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 592
Target Start/End: Complemental strand, 10097666 - 10097633
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggg 592  Q
    ||||||||||||||||||||||||||||||||||    
T  10097666 gggccaaaactgctacaattgcaaaacttagggg 10097633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 15029187 - 15029126
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||| || || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  15029187 aaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagtt 15029126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 35250322 - 35250363
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||||||| |||||||||||||||||| |||||    
T  35250322 gggccaaaactgctacagttgcaaaacttagggggcagtttt 35250363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 36580477 - 36580518
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||| |||| |||||||||||||||||||||||    
T  36580477 gggccaaaactgccacaaatgcaaaacttagggggcggtttt 36580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 36903455 - 36903520
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||| |||||||||| || |||| |||||||||||| ||||||||||||||| || ||||| |||||    
T  36903455 accgaaaattggccttgggggctaaaactgctacagttgcaaaacttagggtgcagttttgtagtt 36903520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 41243827 - 41243892
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||  || ||||||||||| ||||| ||||||||||||| ||||| |||| |||||    
T  41243827 accaaaaattggcattgagggccaaaactactacagttgcaaaacttagtgggcgattttgtagtt 41243892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 414 - 510
Target Start/End: Complemental strand, 17931976 - 17931880
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||||||| |||| |||||||| |||  ||||||||  ||| || | ||||||||||   ||||| |||||||| ||| |||||||||||||    
T  17931976 tacaaaatcgccctctaaattttgcatctgtgtcagttttggtcccaaatatcaattttgactttgtctacgctgacgtggcaccctaagtgaggtg 17931880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 543 - 606
Target Start/End: Original strand, 20185102 - 20185166
Alignment:
Q  543 caaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||| ||| || ||| |||||||||||||| |||||||||||||| ||||||||| |||||    
T  20185102 caaaaattagccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagtt 20185166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 624 - 660
Target Start/End: Complemental strand, 44312792 - 44312756
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaact 660  Q
    ||||||| |||||||||||||||||||||||||||||    
T  44312792 aaaatcgcaacttcgtaaaagttaggagacgaaaact 44312756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 428 - 492
Target Start/End: Original strand, 45717980 - 45718044
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||| |||  ||||||||||||| |||| |||||||||| ||||||| | ||||||    
T  45717980 ctaagttttgcatctgtgtcagttttgacccctaagatcaattttgactcggtctacgttgacgt 45718044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 3381974 - 3381927
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  3381974 gggccaaaactgccacatatgcaaaacttagggggcggttttgtagtt 3381927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 15348204 - 15348145
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    |||||||| ||||||||||||||||||   || ||||||||| |||||||| ||||||||    
T  15348204 ctacaaaaccgccccctaagttttgcaaccgtagcagttttggcccccaaggccaatttt 15348145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 516
Target Start/End: Original strand, 19644885 - 19644972
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    |||||||| ||  ||| ||||||||| || |||||||||||||| || | ||||| |||||||| ||| | ||||||||||| |||||    
T  19644885 taagttttacaactgtagcagttttggcctccaagaccaattttaacccagtctacgctgacgtggcaccgtaagtgaggtgccacat 19644972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 403
Target Start/End: Complemental strand, 19645117 - 19645058
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaag 403  Q
    ||||||||| |||||||||  |||| |||||||  | |||||||||||||||||||||||    
T  19645117 taggtttaatagcaattttcgccccttaactttcacgaagttgcgattttggcccctaag 19645058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 668
Target Start/End: Complemental strand, 28350242 - 28350119
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaag 644  Q
    |||||||| | || ||||||||||||| |||   |||||||||||||||||||||| |||||         | || || |||||||||||||||| ||||    
T  28350242 aaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaag 28350143  T
Q  645 ttaggagacgaaaactactattaa 668  Q
    ||||| | | |||||| |||||||    
T  28350142 ttagggggctaaaactgctattaa 28350119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 28472581 - 28472627
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  28472581 gggccaaaactgctacagttgcaaaactta-ggggcggttttgtagtt 28472627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 40872394 - 40872351
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgac 456  Q
    |||||||| || |||||||||||||||||||| |||||||||||    
T  40872394 ctacaaaaccgtcccctaagttttgcatatgtggcagttttgac 40872351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 3247377 - 3247423
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||||| |||||||| ||||| ||||||||| |||||    
T  3247377 ggccaaaactgctacagttgcaaaatttaggaggcggttttgtagtt 3247423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 560 - 606
Target Start/End: Original strand, 15107195 - 15107241
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| |||| |||||||||||||| |||||||| |||||    
T  15107195 ggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtt 15107241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 9500089 - 9500150
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||| | ||||   ||||||||||||||||||||| |||||    
T  9500089 aaaattggccttgggggccaaaactaccacaaggtcaaaacttagggggcggttttgtagtt 9500150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 18186639 - 18186700
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || || |||||||||| |||  ||||||||||| ||| |||||||||||||    
T  18186639 aaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtt 18186700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 560 - 605
Target Start/End: Complemental strand, 18504354 - 18504309
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagt 605  Q
    |||||||||||| |||  ||||||||||||||||||||||| ||||    
T  18504354 ggccaaaactgccacatatgcaaaacttagggggcggttttgtagt 18504309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 594
Target Start/End: Original strand, 19644987 - 19645040
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggc 594  Q
    |||||||||||||  ||  |||||||||||||||| ||||||||||||| ||||    
T  19644987 accaaaaattggctttggaggccaaaactgctacagttgcaaaacttagagggc 19645040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 672 - 713
Target Start/End: Original strand, 28117699 - 28117740
Alignment:
Q  672 taaaatatatggacttaattgataataagtggttaaatatag 713  Q
    ||||||||| ||||||| |||||| |||||||||||||||||    
T  28117699 taaaatataaggacttagttgatagtaagtggttaaatatag 28117740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 349 - 398
Target Start/End: Complemental strand, 36903578 - 36903529
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggccc 398  Q
    |||| |||| |||||||||| |||||||| ||| ||||||||||||||||    
T  36903578 ttaatagcagttttaaccccctaactttttcaatgttgcgattttggccc 36903529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 413 - 513
Target Start/End: Original strand, 470 - 570
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| | ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||    
T  470 ctacaaaaccaccccctaagttttacatatgtggcagttttggcccccaagaccaattttgactcggtctatactgacgtggcaccctaaatgaggtgtc 569  T
Q  513 a 513  Q
    |    
T  570 a 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 565 - 665
Target Start/End: Original strand, 617 - 718
Alignment:
Q  565 aaactgctacaattgcaaaacttagggggcggttttatag-ttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaactact 663  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||         | || || ||||||| ||||||||||||||||||||||||||||| ||    
T  617 aaactgctagaattgcaaaacttaaggggcggttttgtagtttttttttcttagggggccaaaatcgcaacttcgtaaaagttaggagacgaaaactgct 716  T
Q  664 at 665  Q
    ||    
T  717 at 718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 1e-25; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 520
Target Start/End: Complemental strand, 41487525 - 41487350
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    ||||||||| |||| ||||| |||  |||||||||||||||||||||||| |||| ||||         |||||||| ||||||||||||||||||  ||    
T  41487525 taggtttaatagcagttttagccctctaacttttccaaagttgcgattttagcccttaag-aaaaaaaactacaaaaccgccccctaagttttgcaactg 41487427  T
Q  444 tcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    | || |||||| |||||||||||||||||||| ||||||| ||||||||  ||  |||||||||||| || ||||||    
T  41487426 tagctgttttggcccccaagaccaattttgactcggtctacgctgacgtgacacgctaagtgaggtgccatatgtta 41487350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 413 - 504
Target Start/End: Complemental strand, 37813338 - 37813247
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagt 504  Q
    |||||||| ||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||||| ||| |||||||    
T  37813338 ctacaaaaccgccccctaagttttgcatctgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggcaccctaagt 37813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 45177268 - 45177375
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||| |||||||||||||||| |||  |||||||| ||| |||| | ||||||||| |||||||  ||||||| ||| |||||||||||||||    
T  45177268 ctacaaaatcgtcccctaagttttgcatctgtgacagttttggccctcaaggctaattttgactcggtctacactgacgtggcaccctaagtgaggtgtc 45177367  T
Q  513 acatgtta 520  Q
    ||||||||    
T  45177368 acatgtta 45177375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 3676375 - 3676278
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||| ||||||||||||| ||| |||||||||  |||||| |||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  3676375 ctacaaaaccgcccactaagttttgcatctgtggcagttttggtccccaaaaccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 3676278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 30539238 - 30539132
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||| ||| ||||||||| |||||||   |||||||||  |||||||||||||||| ||| ||||||||||||| |    
T  30539238 ctacaaaaccgtcccctaagttttgcatctgtggcagttttggcccccaatgtcaattttgattcggtctatgctgacgtggcaccctaagtgaggtgcc 30539139  T
Q  513 acatgtt 519  Q
    || ||||    
T  30539138 acgtgtt 30539132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 425 - 506
Target Start/End: Original strand, 14880414 - 14880495
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtga 506  Q
    ||||||| |||||||| ||| ||||||||| |||||||| || |||||||| |||||||||||||||| |||||||||||||    
T  14880414 cccctaaattttgcatctgtggcagttttggcccccaaggccgattttgactcggtctatgctgacgtggcatcctaagtga 14880495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 344 - 511
Target Start/End: Complemental strand, 32071327 - 32071164
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatg 443  Q
    |||| |||| |||| ||||| |||| ||||||||| ||||||||||||||| ||||||||         |||||||| |||||||||||||||||||||     
T  32071327 taggcttaatagcagttttagcccc-taacttttctaaagttgcgattttgacccctaag---aaaaaactacaaaaccgccccctaagttttgcatata 32071232  T
Q  444 tcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgt 511  Q
    |  ||||||||  | |||||| |||||||||| ||||||| |||||| || || | ||||||||||||    
T  32071231 tgacagttttggtctccaagaacaattttgactcggtctacgctgacatatcaccttaagtgaggtgt 32071164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 6807416 - 6807319
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| | ||||||||||||||||| ||| ||||||||| ||| ||||  |||||||||| | ||||| |||||||| ||| |||||||||||||    
T  6807416 ctacaaaaccaccccctaagttttgcatttgtggcagttttgtccctcaaggtcaattttgactctgtctacgctgacgtggcaccctaagtgaggtg 6807319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 413 - 514
Target Start/End: Original strand, 21486721 - 21486822
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||  ||| ||| ||||| || |||||| ||||||||||  |||||| ||||||||  || |||||||||||||||    
T  21486721 ctacaaaaccgccccctaagttttgcacctgtggcatttttggcctccaagatcaattttgacttggtctacgctgacgtgacaccctaagtgaggtgtc 21486820  T
Q  513 ac 514  Q
    ||    
T  21486821 ac 21486822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 16982857 - 16982751
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| ||||||||||||||||||| |||  |||||||| |||||||| |||||||||||   ||||| |||||||| ||| || |||||||||| |    
T  16982857 ctacaaaaccgccccctaagttttgcatctgtgccagttttg-cccccaaggccaattttgacttagtctacgctgacgtggcaccccaagtgaggtgcc 16982759  T
Q  513 acatgtta 520  Q
    || |||||    
T  16982758 acgtgtta 16982751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 37939978 - 37940056
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| | ||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||||| ||||||||    
T  37939978 ctacaaaaccaccccctaagttttgcatatgtggcagttttg-gcaccaagaccaattttgactcggtctacgctgacgt 37940056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 413 - 474
Target Start/End: Original strand, 20853443 - 20853504
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttga 474  Q
    |||||||| | ||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  20853443 ctacaaaaccaccccctaagttttgcatatgtggcagttttggcccccaagatcaattttga 20853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 429 - 510
Target Start/End: Complemental strand, 29044778 - 29044697
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||||| | | ||||| |||||||    
T  29044778 taagttttgcatttgtggcagttttggcccccaaggccaattttgactcggtctacgctgacgtggtaccctaaatgaggtg 29044697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 344 - 399
Target Start/End: Complemental strand, 19499491 - 19499436
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||||||||||||| |||||||||| ||||||||  ||||||||||||||||||||    
T  19499491 taggtttaaaagcatttttaaccccgtaacttttaaaaagttgcgattttggcccc 19499436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 25144009 - 25144116
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||| | || ||||||||||||| ||| ||||||||| |  ||||  ||||||||||| |||| || |||||||| ||| ||||||||| ||| |    
T  25144009 ctacaaaattggccactaagttttgcatctgtggcagttttggcatccaaagccaattttgactcggtttacgctgacgttgcaccctaagtgatgtgcc 25144108  T
Q  513 acatgtta 520  Q
    ||||||||    
T  25144109 acatgtta 25144116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 541 - 592
Target Start/End: Original strand, 27545540 - 27545591
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggg 592  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  27545540 accaaaaattggccttgggggccaaaactgctacaattgtaaaacttagggg 27545591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 23702381 - 23702275
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||| | |||||||||||||||| |||  |||||||| || |||||  |||||||||| | |||||||||||| | ||| |||||||||| || ||    
T  23702381 tacaaaattgtcccctaagttttgcatttgtgacagttttggcctccaaggtcaattttgactcagtctatgctgacatggcaccctaagtgagatgcca 23702282  T
Q  514 catgtta 520  Q
    | |||||    
T  23702281 cgtgtta 23702275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 541 - 674
Target Start/End: Original strand, 25144126 - 25144257
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgt 639  Q
    |||||||||||||| || ||| |||||| ||| ||||||||||||||||||||| |||||| |||||          ||| |||||||||| ||||||||    
T  25144126 accaaaaattggccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgtagtt---ttttcttaggggctaaaatcgcaacttcgt 25144222  T
Q  640 aaaagttaggagacgaaaactactattaaacctaa 674  Q
     || |||||||| |||||| | |||||||||||||    
T  25144223 gaatgttaggaggcgaaaattgctattaaacctaa 25144257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 560 - 606
Target Start/End: Complemental strand, 41487311 - 41487265
Alignment:
Q  560 ggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||    
T  41487311 ggccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 41487265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 545 - 675
Target Start/End: Original strand, 41487398 - 41487527
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaag 644  Q
    |||||||| | || |||||||||| |||||| |||||||||||||||||||||||| |||||         |||| |||||||||| ||||| | |||||    
T  41487398 aaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgtagttttttttcttaagg-gctaaaatcgcaactttggaaaag 41487496  T
Q  645 ttaggagacgaaaactactattaaacctaaa 675  Q
    ||||  | | |||||| ||||||||||||||    
T  41487497 ttagagggctaaaactgctattaaacctaaa 41487527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 423 - 520
Target Start/End: Original strand, 29790834 - 29790931
Alignment:
Q  423 gccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||| |||||||||||| |||| |||||||||  |||| ||  ||||||||||  |||||| |||||||| ||| |||| |||| |||||||||||||    
T  29790834 gccctctaagttttgcacatgtggcagttttggtccccgaggtcaattttgacttggtctacgctgacgtggcaccctatgtgaagtgtcacatgtta 29790931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 37813279 - 37813340
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  37813279 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtt 37813340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 414 - 510
Target Start/End: Original strand, 33298407 - 33298503
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||||| | | ||||||| |||| ||| ||||||||| | |||||| | ||||||||  ||||||| |||||||| ||| |||||||||||||    
T  33298407 tacaaaatcgtctcataagtttggcatctgtggcagttttggctcccaagtctaattttgattcggtctacgctgacgtggcaccctaagtgaggtg 33298503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 29657770 - 29657877
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagtttt-gacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgt 511  Q
    |||||||| |||||||||| |||||||||||| |||||||| | |||||||   |||||||||  |||||||  |||||||  || |||||||||||||     
T  29657770 ctacaaaaccgccccctaaattttgcatatgtggcagttttggccccccaaagtcaattttgattcggtctacactgacgtgacaccctaagtgaggtgc 29657869  T
Q  512 cacatgtt 519  Q
    ||| ||||    
T  29657870 cacgtgtt 29657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 22846510 - 22846616
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||| ||| |||||||||||| | | ||||||||| ||| ||||  |||||||||   |||||| |||||| | ||| ||||||||||||| |    
T  22846510 ctacaaaatcgtcccataagttttgcatctttggcagttttggccctcaagggcaattttgaattggtctacgctgacatggcaccctaagtgaggtgcc 22846609  T
Q  513 acatgtt 519  Q
    || ||||    
T  22846610 acgtgtt 22846616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 413 - 519
Target Start/End: Original strand, 27545408 - 27545512
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    ||||||||||| ||| |||||||||||| | | ||||||||| |||| ||| |||||||| || || |||| |||||||| ||| ||||||||||||| |    
T  27545408 ctacaaaatcgaccc-taagttttgcatctatggcagttttggccccaaag-ccaattttaactcgatctacgctgacgtggcaccctaagtgaggtgcc 27545505  T
Q  513 acatgtt 519  Q
    || ||||    
T  27545506 acgtgtt 27545512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 30539119 - 30539053
Alignment:
Q  541 accaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || ||| |||||||||||||| ||| |||||||||||||| ||||| |||||    
T  30539119 accaaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggcagttttgtagtt 30539053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 450 - 507
Target Start/End: Original strand, 25897073 - 25897129
Alignment:
Q  450 ttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgag 507  Q
    ||||| |||||||||||||||||||| | ||||| |||||||| ||||||||||||||    
T  25897073 ttttggcccccaagaccaattttgactc-gtctacgctgacgtggcatcctaagtgag 25897129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 413 - 474
Target Start/End: Original strand, 26823893 - 26823954
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttga 474  Q
    |||||||||| ||||||||||||||||| ||| |||||||||  ||||||  ||||||||||    
T  26823893 ctacaaaatcaccccctaagttttgcatttgtggcagttttgggccccaatgccaattttga 26823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 446 - 518
Target Start/End: Original strand, 4132854 - 4132926
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgt 518  Q
    |||||||||| |||| || ||| | ||||| ||||| |||||||||| ||| ||||||||||||| |||||||    
T  4132854 gcagttttgaacccccagtccagtgttgactcggtcaatgctgacgtggcaccctaagtgaggtgccacatgt 4132926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 624 - 660
Target Start/End: Complemental strand, 20228278 - 20228242
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaact 660  Q
    ||||||| |||||||||||||||||||||||||||||    
T  20228278 aaaatcgcaacttcgtaaaagttaggagacgaaaact 20228242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 347 - 399
Target Start/End: Original strand, 25896991 - 25897043
Alignment:
Q  347 gtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||||| |||| ||||| |||| |||||||| |||||||||||||||||||||    
T  25896991 gtttaatagcagttttagccccctaactttttcaaagttgcgattttggcccc 25897043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 414 - 493
Target Start/End: Complemental strand, 45457237 - 45457157
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaa-gaccaattttgacgcggtctatgctgacgta 493  Q
    |||||||||| ||||||| |||||||| ||| ||||||||||| ||||| | |||||||||||  | |||| |||||||||    
T  45457237 tacaaaatcgtcccctaaattttgcatctgtggcagttttgactcccaaggcccaattttgacttgatctacgctgacgta 45457157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 414 - 492
Target Start/End: Original strand, 12278903 - 12278981
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||  |||||||| || ||| || | ||||||||||| ||||| |||||||||||||| ||||| | ||||||||    
T  12278903 tacaaaacagccccctatgtattggatttttcgcagttttggccccctagaccaattttgactcggtcaacgctgacgt 12278981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 22192545 - 22192439
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || | |||||||||||||  ||| || |||||| |  |||||  |||||||||| ||||||| ||| | || ||| |||||||||||||||    
T  22192545 ctacaaaaccgtctcctaagttttgcaactgtagccgttttggctgccaaggtcaattttgactcggtctacgcttatgtggcaccctaagtgaggtgtc 22192446  T
Q  513 acatgtt 519  Q
    || ||||    
T  22192445 acgtgtt 22192439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 399
Target Start/End: Complemental strand, 28349626 - 28349568
Alignment:
Q  341 atataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    ||||||| |||| || | ||||| |||| ||||||| ||||||||||||||||||||||    
T  28349626 atataggcttaatagtagttttagccccctaactttcccaaagttgcgattttggcccc 28349568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 413 - 519
Target Start/End: Complemental strand, 44101536 - 44101431
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||||| |||| |||||||||||| ||| |||||||||  ||| | ||||||||||||| ||||  | ||||||||  |||||||| ||| ||| |    
T  44101536 ctacaaaatcaccccttaagttttgcatctgtagcagttttg-gcccaacgaccaattttgactcggttaacgctgacgtgacatcctaaatgaagtgcc 44101438  T
Q  513 acatgtt 519  Q
    || ||||    
T  44101437 acgtgtt 44101431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 6807357 - 6807418
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||| || || ||| ||||||||| |||| |||||||||||||||| |||||| |||||    
T  6807357 aaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgtagtt 6807418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 559 - 600
Target Start/End: Original strand, 14880537 - 14880578
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    ||||||||||||| ||| |||||||||||||| |||||||||    
T  14880537 gggccaaaactgcgacagttgcaaaacttaggaggcggtttt 14880578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 565 - 606
Target Start/End: Original strand, 33298545 - 33298586
Alignment:
Q  565 aaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  33298545 aaactgctactgttgcaaaacttagggggcggttttgtagtt 33298586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 60; Significance: 5e-25; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 76929 - 77035
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||  ||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  76929 ctacaaagccgccccctaagttttgcatttgtggcagttttg-cccccaaggccaattttgactcggtctacgctgacgtggcaccctaagtgaggtgtc 77027  T
Q  513 acatgtta 520  Q
    || |||||    
T  77028 acgtgtta 77035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 77044 - 77110
Alignment:
Q  541 accaaaaattggccatgc-gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| ||  ||||||||||||||||| ||| |||||||||||| || |||| |||||    
T  77044 accaaaaattggccgtggagggccaaaactgctacagttgtaaaacttaggggacgattttgtagtt 77110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 76987 - 76927
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || |||| |||||||| |||| ||||||||||||||||||| ||| |||||    
T  76987 aaaattggccttgggggc-aaaactgccacaaatgcaaaacttagggggcggctttgtagtt 76927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 8e-24; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 354 - 519
Target Start/End: Complemental strand, 10727500 - 10727335
Alignment:
Q  354 agcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagtttt 453  Q
    |||| ||||| |||| ||||||||||||||||| ||||||||||||  | |        |||||||| ||||||||||||||||||| ||| ||||||||    
T  10727500 agcagttttagccccctaacttttccaaagttgtgattttggccccctaagaaaaaaaactacaaaaccgccccctaagttttgcatctgtggcagtttt 10727401  T
Q  454 gacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtt 519  Q
    | |||||||| |||||||||||  | |||| |||||||| | | |||||||||| || ||||||||    
T  10727400 ggcccccaaggccaattttgacttgatctacgctgacgtgggaccctaagtgagatgccacatgtt 10727335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 26311651 - 26311554
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| | |||| |||||||||||||||| ||||||||| ||||||||  |||||||||| ||||||| |||||||| |||||||||||||||||    
T  26311651 ctacaaaaccaccccttaagttttgcatatgtggcagttttggcccccaaggtcaattttgactcggtctacgctgacgtggcatcctaagtgaggtg 26311554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 349 - 520
Target Start/End: Complemental strand, 6036969 - 6036800
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc-cctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||| ||||| |||| ||||||||| |||||||||||||||||| ||||||         ||||||||  | |||||||||||||||||||| ||    
T  6036969 ttaatagcagttttagcccc-taacttttctaaagttgcgattttggcctcctaag--aagaaaactacaaaactgtcccctaagttttgcatatgtggc 6036873  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||  |||||||||||  ||| |||||||||||  || ||||||||||||| |||||||||    
T  6036872 agttttgacccccaaagccaattttgacttggtttatgctgacgtgacaccctaagtgaggtgccacatgtta 6036800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 349 - 520
Target Start/End: Original strand, 30349352 - 30349522
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttg-gcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgc 447  Q
    |||| |||| ||||| |||  ||||||| ||||||||||||||||| |||||||||         |||||||| |||||| |||||||||||| ||| |     
T  30349352 ttaatagcagttttagccctctaactttcccaaagttgcgattttgagcccctaag--aaaaaaactacaaaaccgccccttaagttttgcatctgtggt 30349449  T
Q  448 agttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||||||||||||| |||||| |||| ||||||| | |||||| ||| ||||||||||||| |||||||||    
T  30349450 agttttgacccccaaggccaattatgactcggtctacgttgacgtggcaccctaagtgaggtgccacatgtta 30349522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 426 - 510
Target Start/End: Original strand, 3812820 - 3812903
Alignment:
Q  426 ccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  3812820 ccctaagttttgcatatgtggcagttttggcccc-aagaccaattttgacccggtctacgctgacgtggcaccctaagtgaggtg 3812903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 338 - 514
Target Start/End: Original strand, 26601453 - 26601628
Alignment:
Q  338 aaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttg 437  Q
    |||| |||||||||| | || ||||| | || ||||||||  ||||||||||||||||||||||||          ||||||| | ||||||||||||||    
T  26601453 aaaaaataggtttaataacagttttatctccttaacttttttaaagttgcgattttggcccctaagaaaaaaaat-tacaaaaccaccccctaagttttg 26601551  T
Q  438 catatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcac 514  Q
    ||| |||  ||| ||||  ||||||||||||||||||| ||||||| ||||| |||||| ||| |||||||||||||    
T  26601552 catctgtgacagctttggtccccaagaccaattttgactcggtctacgctgatgtagcacccttagtgaggtgtcac 26601628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 32143326 - 32143432
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| |||||| |||||||||||  ||| ||||||||| |||||||||||||||||||| ||||||| | ||| || |||  |||||||||||| ||    
T  32143326 tacaaaaccgccccttaagttttgcacctgtggcagttttggcccccaagaccaattttgactcggtctacgttgatgtggcactctaagtgaggtggca 32143425  T
Q  514 catgtta 520  Q
    |||||||    
T  32143426 catgtta 32143432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 343 - 520
Target Start/End: Original strand, 33399783 - 33399958
Alignment:
Q  343 ataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggccc-ctaaggnnnnnnnnctacaaaatcgccccctaagttttgcata 441  Q
    ||||| |||| |||| ||||| |||| ||||||||||||||||||||||||||||| |||||         |||||||| ||  ||||||||||| |||     
T  33399783 ataggcttaatagcagttttagcccc-taacttttccaaagttgcgattttggccctctaag--aaaaaaactacaaaaccggaccctaagttttacatt 33399879  T
Q  442 tgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||| ||||||||| |||| |||  |||||||||| ||||||| |||||||| ||| ||||||||| ||||||| |||||    
T  33399880 tgtggcagttttggcccctaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgatgtgtcacgtgtta 33399958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 414 - 518
Target Start/End: Original strand, 1377275 - 1377379
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||||||||||||| |||||||| ||| || |||||| ||| |||| |  |||||||| ||||||||||||| || ||| ||||||||||||| ||    
T  1377275 tacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcca 1377374  T
Q  514 catgt 518  Q
    |||||    
T  1377375 catgt 1377379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 414 - 518
Target Start/End: Original strand, 1385023 - 1385127
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    |||||||||||||||||| |||||||| ||| || |||||| ||| |||| |  |||||||| ||||||||||||| || ||| ||||||||||||| ||    
T  1385023 tacaaaatcgccccctaaattttgcatttgtggctgttttggccctcaaggcttattttgactcggtctatgctgatgtcgcaccctaagtgaggtgcca 1385122  T
Q  514 catgt 518  Q
    |||||    
T  1385123 catgt 1385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 414 - 520
Target Start/End: Complemental strand, 266357 - 266252
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtca 513  Q
    ||||||| |||||| |||||||||||  ||| ||||||||| |||| || |||||||||||  ||||||| ||||||||  |||||||||||||||||||    
T  266357 tacaaaaccgccccttaagttttgcacctgtggcagttttggccccaaa-accaattttgattcggtctacgctgacgtgacatcctaagtgaggtgtca 266259  T
Q  514 catgtta 520  Q
    | |||||    
T  266258 cgtgtta 266252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 492
Target Start/End: Complemental strand, 2853662 - 2853583
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||| ||||||||||||||| ||||||| ||||||||| |||||||| ||||||||||| |  |||| ||||||||    
T  2853662 ctacaaaaccgccccctaagtttttcatatgtggcagttttggcccccaaggccaattttgactcattctacgctgacgt 2853583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 543 - 606
Target Start/End: Original strand, 12766401 - 12766464
Alignment:
Q  543 caaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||| || ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  12766401 caaaaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtt 12766464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 348 - 510
Target Start/End: Complemental strand, 239257 - 239095
Alignment:
Q  348 tttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccc--taagttttgcatatgtc 445  Q
    ||||| |||| |||||||||| |||||||  |||||||||||||| | ||||||||         ||||||||||| ||||  ||||||| |||  |||     
T  239257 tttaatagcagttttaaccccctaactttctcaaagttgcgatttggtcccctaag--aaaaaaactacaaaatcgtcccccataagtttagcacctgtt 239160  T
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||||| | |||||| ||||||||||  ||||||| |||||||| ||| |||||||||||||    
T  239159 gcagttttggcacccaaggccaattttgattcggtctacgctgacgtggcaccctaagtgaggtg 239095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 2853557 - 2853492
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||| || || |||||||||||||| |||||||||||||||| ||||||| |||||    
T  2853557 accaaaaattggccttggggaccaaaactgctacagttgcaaaacttaggggacggttttgtagtt 2853492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 415 - 520
Target Start/End: Complemental strand, 5003324 - 5003219
Alignment:
Q  415 acaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcac 514  Q
    ||||||| |||||||||||||||||  ||| ||||||||| | |||||   ||||||| ||  |||||| ||||||||  || |||||||||||||||||    
T  5003324 acaaaattgccccctaagttttgcaattgtggcagttttggctcccaatgtcaattttaacttggtctacgctgacgtgacaccctaagtgaggtgtcac 5003225  T
Q  515 atgtta 520  Q
    ||||||    
T  5003224 atgtta 5003219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 413 - 520
Target Start/End: Complemental strand, 18031189 - 18031082
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || ||| ||||||||| || |||   ||||||| ||| ||||| ||||||||||  |||||| |||||||| ||| |||||||||||||||    
T  18031189 ctacaaaaccgtcccttaagttttgtatttgtgatagttttggccctcaagatcaattttgacttggtctacgctgacgtggcaccctaagtgaggtgtc 18031090  T
Q  513 acatgtta 520  Q
    || |||||    
T  18031089 acttgtta 18031082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 600
Target Start/End: Complemental strand, 2840901 - 2840860
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggtttt 600  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  2840901 gggccaaaactgctacaattgcaaaacttaggggacggtttt 2840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 10727382 - 10727443
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  ||||||||||||||||||||||| |||||    
T  10727382 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagtt 10727443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 559 - 668
Target Start/End: Original strand, 33401257 - 33401364
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagttcnnnnnnnnaaggagctaaaatcgtaacttcgtaaaagttaggagacgaaaa 658  Q
    ||||||||||||||||| |||||||||||||||| | ||||| |||||         | ||||| |||||||||||||||||||||||||| |  |||||    
T  33401257 gggccaaaactgctacagttgcaaaacttaggggacagttttgtagtt--tttttttagggagccaaaatcgtaacttcgtaaaagttagggggtgaaaa 33401354  T
Q  659 ctactattaa 668  Q
    || |||||||    
T  33401355 ctgctattaa 33401364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 462
Target Start/End: Complemental strand, 20475010 - 20474903
Alignment:
Q  354 agcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgcagtttt 453  Q
    |||||||||| |||| |||||||| ||||||||||||||||  |||| | |        |||||||| ||||||||||||||||||| ||| ||||||||    
T  20475010 agcaattttagccccctaactttttcaaagttgcgattttgatcccttaagaaaaaaaactacaaaa-cgccccctaagttttgcatctgtggcagtttt 20474912  T
Q  454 gacccccaa 462  Q
    | |||||||    
T  20474911 ggcccccaa 20474903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 2203354 - 2203401
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  2203354 gggccaaaactactacagttgcaaaacttagggggcagttttatagtt 2203401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 3579706 - 3579659
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  3579706 gggccaaaagtgctacagttgcaaaacttagggggcggttttgtagtt 3579659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 425 - 472
Target Start/End: Original strand, 6036723 - 6036770
Alignment:
Q  425 cccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  6036723 cccctaagttttgcatatgtggcagttttggcccccaaggccaatttt 6036770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 563 - 606
Target Start/End: Original strand, 26601666 - 26601709
Alignment:
Q  563 caaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  26601666 caaaactgctacagttgcaaaatttagggggcggttttatagtt 26601709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 28011328 - 28011375
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  28011328 gggccaaaactgctacagttgcaaaacttaaggggcggttttgtagtt 28011375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 2853603 - 2853664
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||||| |||  || |||||||||||||||||||| |||||    
T  2853603 aaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagtt 2853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 3812931 - 3812996
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| ||  || ||||||||||| |||||||||||||| ||||||| || ||||||||||    
T  3812931 accaaaaattagctttgagggccaaaactactacaattgcaaaatttaggggacgattttatagtt 3812996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 10727320 - 10727255
Alignment:
Q  542 ccaaaaattggccatgcggg-ccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| || ||| |||||||||||||| ||||||||||||| |||| ||||| |||||    
T  10727320 ccaaaaattggccttggggggccaaaactgctacagttgcaaaacttagagggcagttttgtagtt 10727255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 416 - 509
Target Start/End: Original strand, 17248706 - 17248799
Alignment:
Q  416 caaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    ||||| ||||| ||||||||||||| ||   |||||||| |||  ||||||||||||||  ||||||| | |||||| ||| ||||||||||||    
T  17248706 caaaaccgccctctaagttttgcatctgcgacagttttggcccttaagaccaattttgattcggtctacgttgacgtggcaccctaagtgaggt 17248799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 430 - 510
Target Start/End: Original strand, 11351719 - 11351799
Alignment:
Q  430 aagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    ||||||| ||||| | ||||||||   ||||||  ||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  11351719 aagttttacatatatggcagttttcgtccccaatgccaattttgactcggtctacgctgacgtggcaccctaagtgaggtg 11351799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 5605903 - 5605958
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    |||| ||||||||||||||| ||| ||| ||||||||||||| ||| |||||||||    
T  5605903 aaaaccgccccctaagttttacatttgtggcagttttgaccctcaaaaccaatttt 5605958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 592
Target Start/End: Complemental strand, 6036774 - 6036723
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggg 592  Q
    |||||||||||||| || ||||||||||||| |||  |||||||||||||||    
T  6036774 accaaaaattggccttgggggccaaaactgccacatatgcaaaacttagggg 6036723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Complemental strand, 12766462 - 12766403
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    |||||||| |||||| |||||||||||  ||| ||||||||| |||||||| ||||||||    
T  12766462 ctacaaaaccgccccttaagttttgcaactgtagcagttttggcccccaaggccaatttt 12766403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 606
Target Start/End: Original strand, 17248844 - 17248890
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||    
T  17248844 gggccaaaactgctacaattgcaaaactt-ggggacggttttgtagtt 17248890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 17532318 - 17532424
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| |||||| |||||||||||  ||| ||||||||| |||| ||  ||| ||||||| ||||||| | |||| | ||| || |||||||||| |    
T  17532318 ctacaaaaccgccccttaagttttgcacctgtggcagttttggcccctaaagccagttttgactcggtctacgatgacatggca-cccaagtgaggtgcc 17532416  T
Q  513 acatgtta 520  Q
    ||||||||    
T  17532417 acatgtta 17532424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 429 - 503
Target Start/End: Complemental strand, 2841039 - 2840965
Alignment:
Q  429 taagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaag 503  Q
    |||||||||||| ||| ||||||||| ||| ||| |||||||||||| || |||| | |||||| ||| ||||||    
T  2841039 taagttttgcatttgtggcagttttggcccgcaaaaccaattttgactcgctctacgttgacgtggcaccctaag 2840965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 564 - 606
Target Start/End: Complemental strand, 26311501 - 26311459
Alignment:
Q  564 aaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||||||||||||| ||| |||| |||||||||||    
T  26311501 aaaactgctacaattgcaaaacatagagggcagttttatagtt 26311459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 446 - 492
Target Start/End: Complemental strand, 29874417 - 29874371
Alignment:
Q  446 gcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  29874417 gcagttttggccccctagaccaattttgactcggtcaatgctgacgt 29874371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 549 - 606
Target Start/End: Complemental strand, 239049 - 238992
Alignment:
Q  549 ttggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||| || ||||||||||||||||  |||||||||||||||| || |||| |||||    
T  239049 ttggccttgggggccaaaactgctacggttgcaaaacttaggggacgattttgtagtt 238992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 266188 - 266237
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaa 462  Q
    ||||||||| ||||| |||||||||||  ||| |||||||||||||||||    
T  266188 ctacaaaattgccccttaagttttgcaactgtagcagttttgacccccaa 266237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 397
Target Start/End: Original strand, 2203185 - 2203238
Alignment:
Q  344 taggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcc 397  Q
    |||| |||| |||||||||| | || ||||||| ||||||||||||||||||||    
T  2203185 taggcttaatagcaattttagctccctaactttcccaaagttgcgattttggcc 2203238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 561 - 594
Target Start/End: Original strand, 5003283 - 5003316
Alignment:
Q  561 gccaaaactgctacaattgcaaaacttagggggc 594  Q
    ||||||||||| ||||||||||||||||||||||    
T  5003283 gccaaaactgccacaattgcaaaacttagggggc 5003316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 349 - 514
Target Start/End: Original strand, 19917 - 20081
Alignment:
Q  349 ttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccctaaggnnnnnnnnctacaaaatcgccccctaagttttgcatatgtcgca 448  Q
    |||| |||| |||||||||| ||| ||||  ||||||| ||||||||||||||||         ||||||||||| || ||||||||||||| ||| |||    
T  19917 ttaatagcagttttaaccccctaaattttttaaagttgtgattttggcccctaag-aaaaaaaactacaaaatcgtccactaagttttgcatctgtggca 20015  T
Q  449 gttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcac 514  Q
    |||||| |||||||  ||||||||||| || |||| ||| |||| ||| |||||||||||||||||    
T  20016 gttttggcccccaaagccaattttgactcgatctacgctaacgtggcaccctaagtgaggtgtcac 20081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 9478 - 9585
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||| || |||||||||||||||||||| ||||||||  |||||||| ||||||||||| ||||||| ||||||||  |||| ||| ||||||| |    
T  9478 ctacaaaaccgtcccctaagttttgcatatgtggcagttttagcccccaaggccaattttgactcggtctaggctgacgtgacatcttaaatgaggtgcc 9577  T
Q  513 acatgtta 520  Q
    || |||||    
T  9578 acgtgtta 9585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 545 - 606
Target Start/End: Complemental strand, 9537 - 9476
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || |||| |||||||| |||  ||||||||||||||| ||||||| |||||    
T  9537 aaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtt 9476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 51; Significance: 1e-19; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 434 - 520
Target Start/End: Original strand, 9425 - 9511
Alignment:
Q  434 tttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    |||||| |||| | ||||||| ||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||    
T  9425 tttgcacatgtggtagttttggcccccaagatcaattttgactcggtctacgctgacgtggcatcctaagtgaggtgtcacgtgtta 9511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 624 - 673
Target Start/End: Original strand, 9604 - 9653
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaaccta 673  Q
    ||||||| |||||||| |||||||||||  ||||||| ||||||||||||    
T  9604 aaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaaaccta 9653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 413 - 509
Target Start/End: Complemental strand, 19276 - 19180
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggt 509  Q
    |||||||| |||||||||||||||||| |||| | ||||||| |||||||| ||||||||| | ||||||| |||||| ||||| |||| |||||||    
T  19276 ctacaaaaccgccccctaagttttgcacatgtggtagttttggcccccaaggccaattttggctcggtctacgctgacatagcaccctacgtgaggt 19180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 545 - 606
Target Start/End: Original strand, 19217 - 19278
Alignment:
Q  545 aaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||| || ||||||||||| | |||  ||||||||||||||||||||||| |||||    
T  19217 aaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggttttgtagtt 19278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 413 - 520
Target Start/End: Original strand, 145420 - 145527
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtc 512  Q
    |||||||  |||||| ||| |||||||| ||| ||||||||| |||||||| ||||||||||| ||||||| |||||| | | | ||||||||||||| |    
T  145420 ctacaaagccgccccttaaattttgcatctgtggcagttttggcccccaaggccaattttgactcggtctaggctgacatggaaccctaagtgaggtgcc 145519  T
Q  513 acatgtta 520  Q
    || |||||    
T  145520 acgtgtta 145527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 563 - 606
Target Start/End: Original strand, 145561 - 145604
Alignment:
Q  563 caaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||||||||||||||| || ||||| |||||    
T  145561 caaaactgctacaattgcaaaacttagggagcagttttgtagtt 145604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 559 - 606
Target Start/End: Complemental strand, 46188 - 46141
Alignment:
Q  559 gggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  46188 gggccaaaactgctacagttgcaaaacttagggggcggttttgtagtt 46141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 414 - 507
Target Start/End: Complemental strand, 46321 - 46228
Alignment:
Q  414 tacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgag 507  Q
    |||||||  |||| ||||||||||||| |||  |||||||| ||||||||  |||||||||| | ||||| |||||||| ||| ||||||||||    
T  46321 tacaaaactgccctctaagttttgcatctgtgacagttttggcccccaaggtcaattttgactcagtctacgctgacgtggcaccctaagtgag 46228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 413 - 510
Target Start/End: Complemental strand, 25146 - 25050
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtg 510  Q
    |||||||| ||||||||||||||||||||||  | |||||||  |||||| |||||||||||| || |||  |||||||| |||  ||||||||||||    
T  25146 ctacaaaaccgccccctaagttttgcatatgcggtagttttg-gccccaaaaccaattttgactcgatcttcgctgacgtggcactctaagtgaggtg 25050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 624 - 669
Target Start/End: Complemental strand, 24940 - 24895
Alignment:
Q  624 aaaatcgtaacttcgtaaaagttaggagacgaaaactactattaaa 669  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  24940 aaaatcgtaacttcgtaaaagttaggggacgaaaactgctactaaa 24895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 428 - 516
Target Start/End: Original strand, 3157 - 3245
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacat 516  Q
    ||||||||||||| ||| ||| ||||| ||| ||||  |||||||||| ||||||| |||||||| ||| |||||||||| || |||||    
T  3157 ctaagttttgcatttgtggcaattttggccctcaaggtcaattttgactcggtctacgctgacgtggcaccctaagtgagatgccacat 3245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 36; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 417 - 492
Target Start/End: Complemental strand, 9779 - 9705
Alignment:
Q  417 aaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    ||||||||||||||| ||||||||  || ||||||||| |||| ||||||||||||||| || |||| ||||||||    
T  9779 aaaatcgccccctaaattttgcatcggtggcagttttggcccc-aagaccaattttgactcgttctacgctgacgt 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 472
Target Start/End: Original strand, 9617 - 9676
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgacccccaagaccaatttt 472  Q
    ||||||||||||||| |||||||||||  ||| | ||||||| ||||||||| |||||||    
T  9617 ctacaaaatcgccccttaagttttgcaactgtagtagttttggcccccaagatcaatttt 9676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 9680 - 9615
Alignment:
Q  541 accaaaaattggccatgcgggccaaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    |||||||||||  | || ||||||||||| ||||| |||||||||||| |||||| |||| |||||    
T  9680 accaaaaattgatcttgggggccaaaactactacagttgcaaaacttaaggggcgattttgtagtt 9615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 563 - 606
Target Start/End: Original strand, 4220 - 4263
Alignment:
Q  563 caaaactgctacaattgcaaaacttagggggcggttttatagtt 606  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggttttgtagtt 4263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 413 - 458
Target Start/End: Complemental strand, 4261 - 4216
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgaccc 458  Q
    |||||||| ||||||||||||||||||  ||| |||||||||||||    
T  4261 ctacaaaaccgccccctaagttttgcaactgtagcagttttgaccc 4216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 3631 - 3692
Alignment:
Q  338 aaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| ||||| |||| |||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  3631 aaaaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 3631 - 3692
Alignment:
Q  338 aaaatataggtttaaaagcaattttaaccccataacttttccaaagttgcgattttggcccc 399  Q
    |||| ||||| |||| |||| ||||| |||| ||||||| ||||||||||||||||||||||    
T  3631 aaaaaataggcttaatagcagttttagccccctaactttcccaaagttgcgattttggcccc 3692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 428 - 520
Target Start/End: Original strand, 21738 - 21830
Alignment:
Q  428 ctaagttttgcatatgtcgcagttttgacccccaagaccaattttgacgcggtctatgctgacgtagcatcctaagtgaggtgtcacatgtta 520  Q
    ||||||||||| | | | |||||||||   ||||| |||||||||||| ||||||| |||||||| ||| || ||||||| |||||| |||||    
T  21738 ctaagttttgcctctatggcagttttggttcccaaaaccaattttgactcggtctacgctgacgtggcaccccaagtgagttgtcacgtgtta 21830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 93888 - 93931
Alignment:
Q  413 ctacaaaatcgccccctaagttttgcatatgtcgcagttttgac 456  Q
    |||||||| || |||||||||||||||||||| |||||||||||    
T  93888 ctacaaaaccgtcccctaagttttgcatatgtggcagttttgac 93931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 447 - 492
Target Start/End: Original strand, 2004 - 2049
Alignment:
Q  447 cagttttgacccccaagaccaattttgacgcggtctatgctgacgt 492  Q
    |||||||||||||| |||||||||||||| ||||| | ||||||||    
T  2004 cagttttgaccccctagaccaattttgactcggtcaacgctgacgt 2049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University