View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12471_low_9 (Length: 294)

Name: NF12471_low_9
Description: NF12471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12471_low_9
NF12471_low_9
[»] chr1 (69 HSPs)
chr1 (36-143)||(30686568-30686675)
chr1 (36-140)||(35531271-35531375)
chr1 (36-139)||(29830910-29831013)
chr1 (36-136)||(43500663-43500763)
chr1 (36-136)||(1024713-1024813)
chr1 (36-136)||(13566836-13566936)
chr1 (36-136)||(38648614-38648714)
chr1 (36-138)||(12124801-12124903)
chr1 (36-142)||(20605598-20605704)
chr1 (36-137)||(8464236-8464337)
chr1 (36-129)||(49497309-49497402)
chr1 (36-136)||(1677355-1677455)
chr1 (36-136)||(12231051-12231151)
chr1 (36-136)||(1429441-1429541)
chr1 (36-136)||(13507927-13508027)
chr1 (36-136)||(13515115-13515215)
chr1 (36-136)||(19349359-19349459)
chr1 (36-136)||(35483761-35483861)
chr1 (36-119)||(45226574-45226657)
chr1 (36-136)||(37609284-37609381)
chr1 (36-137)||(45368245-45368346)
chr1 (36-136)||(37437033-37437133)
chr1 (36-126)||(7783107-7783197)
chr1 (36-136)||(21927678-21927776)
chr1 (36-137)||(40926732-40926833)
chr1 (38-136)||(2059792-2059890)
chr1 (36-133)||(19929449-19929546)
chr1 (36-136)||(50825553-50825652)
chr1 (36-119)||(28679178-28679261)
chr1 (50-136)||(32168292-32168378)
chr1 (50-136)||(51613582-51613668)
chr1 (36-137)||(10676059-10676160)
chr1 (48-129)||(49908166-49908247)
chr1 (37-137)||(18033805-18033904)
chr1 (36-132)||(35255643-35255739)
chr1 (36-136)||(35700355-35700455)
chr1 (36-136)||(51972261-51972361)
chr1 (36-139)||(13699331-13699434)
chr1 (36-127)||(39412500-39412591)
chr1 (36-130)||(44182916-44183009)
chr1 (36-141)||(31588715-31588820)
chr1 (36-129)||(52749172-52749265)
chr1 (36-136)||(32994450-32994549)
chr1 (50-129)||(5598216-5598295)
chr1 (66-133)||(48174656-48174723)
chr1 (50-136)||(4100889-4100975)
chr1 (75-133)||(31487762-31487820)
chr1 (39-136)||(10506971-10507068)
chr1 (48-132)||(52649713-52649797)
chr1 (75-138)||(9362169-9362232)
chr1 (36-126)||(9127826-9127916)
chr1 (50-136)||(37735119-37735205)
chr1 (48-138)||(48508302-48508392)
chr1 (50-139)||(33720688-33720777)
chr1 (36-136)||(32348135-32348234)
chr1 (55-127)||(36850813-36850885)
chr1 (82-138)||(48264754-48264810)
chr1 (36-118)||(46096703-46096785)
chr1 (36-125)||(30702281-30702370)
chr1 (36-133)||(51974154-51974251)
chr1 (48-136)||(36318521-36318609)
chr1 (50-137)||(42800277-42800364)
chr1 (75-133)||(42787136-42787194)
chr1 (36-130)||(43809061-43809155)
chr1 (76-118)||(43952975-43953017)
chr1 (75-119)||(1039069-1039113)
chr1 (75-119)||(1045975-1046019)
chr1 (84-136)||(18344531-18344583)
chr1 (79-119)||(38569618-38569658)
[»] scaffold0280 (1 HSPs)
scaffold0280 (36-138)||(8311-8413)
[»] chr8 (67 HSPs)
chr8 (36-137)||(38482774-38482875)
chr8 (36-137)||(38128529-38128630)
chr8 (36-136)||(14263701-14263801)
chr8 (36-138)||(39303496-39303599)
chr8 (36-136)||(11994038-11994138)
chr8 (36-136)||(34981986-34982086)
chr8 (36-136)||(35052210-35052310)
chr8 (36-139)||(15596501-15596604)
chr8 (36-136)||(23430066-23430166)
chr8 (36-139)||(9954806-9954909)
chr8 (36-135)||(26062864-26062963)
chr8 (36-136)||(14228305-14228405)
chr8 (36-136)||(33935043-33935143)
chr8 (36-119)||(1202444-1202527)
chr8 (36-138)||(18291620-18291722)
chr8 (36-137)||(25703560-25703661)
chr8 (36-137)||(25812731-25812832)
chr8 (36-136)||(8453219-8453319)
chr8 (36-136)||(13328127-13328227)
chr8 (36-129)||(1245469-1245562)
chr8 (36-145)||(43641963-43642072)
chr8 (36-137)||(45281360-45281461)
chr8 (48-136)||(23848539-23848627)
chr8 (36-126)||(4057445-4057535)
chr8 (36-134)||(16656857-16656955)
chr8 (36-125)||(40228452-40228541)
chr8 (48-136)||(18842698-18842786)
chr8 (36-139)||(14061129-14061232)
chr8 (36-136)||(32010067-32010167)
chr8 (36-128)||(34047008-34047100)
chr8 (48-139)||(2888448-2888539)
chr8 (36-137)||(41308052-41308154)
chr8 (48-136)||(8553999-8554087)
chr8 (36-136)||(10180527-10180627)
chr8 (36-139)||(17313299-17313402)
chr8 (50-136)||(26740120-26740206)
chr8 (36-133)||(12342600-12342697)
chr8 (48-133)||(17074568-17074653)
chr8 (48-133)||(17573617-17573702)
chr8 (33-130)||(31964723-31964820)
chr8 (36-136)||(2456098-2456198)
chr8 (36-136)||(36058389-36058489)
chr8 (36-99)||(7605919-7605982)
chr8 (48-99)||(40603871-40603922)
chr8 (36-130)||(11707443-11707537)
chr8 (75-136)||(35296240-35296301)
chr8 (75-136)||(41701465-41701526)
chr8 (75-138)||(6757602-6757665)
chr8 (50-136)||(8672665-8672751)
chr8 (50-136)||(27911655-27911741)
chr8 (50-136)||(27958074-27958160)
chr8 (75-129)||(29091075-29091129)
chr8 (36-85)||(9808008-9808057)
chr8 (36-137)||(21651728-21651829)
chr8 (80-137)||(30205657-30205713)
chr8 (88-136)||(7483951-7483999)
chr8 (36-136)||(12248753-12248853)
chr8 (36-136)||(23855714-23855814)
chr8 (84-136)||(35029751-35029803)
chr8 (48-132)||(39615440-39615523)
chr8 (36-132)||(43553196-43553292)
chr8 (75-138)||(19972475-19972538)
chr8 (75-138)||(21020295-21020358)
chr8 (75-136)||(13174125-13174186)
chr8 (80-137)||(45317853-45317910)
chr8 (36-80)||(3513514-3513558)
chr8 (78-138)||(23793252-23793312)
[»] chr7 (49 HSPs)
chr7 (36-137)||(7312774-7312875)
chr7 (36-137)||(33099820-33099921)
chr7 (36-136)||(8381983-8382083)
chr7 (36-136)||(32528314-32528414)
chr7 (36-138)||(41891427-41891529)
chr7 (36-136)||(12838064-12838164)
chr7 (36-139)||(32966032-32966135)
chr7 (36-136)||(31430716-31430816)
chr7 (58-137)||(17896476-17896555)
chr7 (47-132)||(36922407-36922493)
chr7 (36-137)||(10227413-10227514)
chr7 (48-136)||(8265118-8265206)
chr7 (36-136)||(29722291-29722391)
chr7 (36-130)||(3838019-3838113)
chr7 (36-119)||(36298177-36298260)
chr7 (36-126)||(18470464-18470554)
chr7 (36-137)||(5732058-5732159)
chr7 (36-131)||(26724081-26724177)
chr7 (36-130)||(29497526-29497620)
chr7 (36-137)||(38168773-38168875)
chr7 (36-138)||(47408270-47408372)
chr7 (36-136)||(41675173-41675272)
chr7 (50-136)||(42841852-42841938)
chr7 (35-136)||(33173963-33174064)
chr7 (48-136)||(28608763-28608851)
chr7 (53-140)||(44820589-44820676)
chr7 (36-90)||(20035205-20035259)
chr7 (36-90)||(20045616-20045670)
chr7 (36-138)||(33921758-33921860)
chr7 (50-143)||(3310377-3310469)
chr7 (36-136)||(33258038-33258138)
chr7 (36-108)||(44480156-44480228)
chr7 (50-145)||(18194191-18194286)
chr7 (75-138)||(47459834-47459897)
chr7 (40-138)||(6799580-6799678)
chr7 (36-129)||(7477191-7477284)
chr7 (36-117)||(36648011-36648091)
chr7 (48-106)||(42881118-42881176)
chr7 (36-129)||(31398925-31399018)
chr7 (36-133)||(31815058-31815154)
chr7 (36-76)||(17896569-17896609)
chr7 (79-126)||(46715308-46715355)
chr7 (75-137)||(41888979-41889041)
chr7 (75-136)||(8380578-8380639)
chr7 (80-129)||(9601886-9601935)
chr7 (80-129)||(9829457-9829506)
chr7 (75-136)||(30866722-30866783)
chr7 (82-126)||(34368656-34368700)
chr7 (50-142)||(41408772-41408864)
[»] chr5 (69 HSPs)
chr5 (36-137)||(39073183-39073284)
chr5 (36-136)||(2673958-2674058)
chr5 (36-133)||(12869882-12869979)
chr5 (36-136)||(8825196-8825296)
chr5 (36-136)||(38910412-38910512)
chr5 (36-137)||(4175459-4175560)
chr5 (36-137)||(42911689-42911789)
chr5 (36-136)||(6072591-6072691)
chr5 (36-136)||(25344099-25344199)
chr5 (36-139)||(38017254-38017357)
chr5 (36-138)||(18794922-18795024)
chr5 (36-138)||(40198927-40199029)
chr5 (36-136)||(4098470-4098570)
chr5 (36-136)||(6754159-6754259)
chr5 (36-136)||(9076210-9076310)
chr5 (36-138)||(7579645-7579748)
chr5 (39-138)||(22582614-22582712)
chr5 (36-129)||(7403991-7404084)
chr5 (36-129)||(10359222-10359315)
chr5 (36-129)||(18020755-18020848)
chr5 (36-137)||(26854074-26854175)
chr5 (36-137)||(34261451-34261552)
chr5 (36-137)||(38363328-38363429)
chr5 (36-137)||(38702280-38702381)
chr5 (48-136)||(1087913-1088001)
chr5 (36-144)||(4017553-4017661)
chr5 (36-136)||(4985155-4985255)
chr5 (36-135)||(28024240-28024339)
chr5 (36-133)||(12664997-12665094)
chr5 (36-136)||(8229784-8229883)
chr5 (36-136)||(36239597-36239697)
chr5 (36-119)||(24074835-24074918)
chr5 (36-130)||(5119317-5119411)
chr5 (36-136)||(4427385-4427486)
chr5 (36-133)||(18465836-18465933)
chr5 (36-136)||(14793770-14793870)
chr5 (36-115)||(31546000-31546079)
chr5 (36-138)||(28446963-28447065)
chr5 (36-136)||(1297717-1297818)
chr5 (36-137)||(9127330-9127431)
chr5 (36-145)||(16124231-16124340)
chr5 (36-144)||(31803463-31803571)
chr5 (34-136)||(6008021-6008124)
chr5 (36-138)||(18437301-18437403)
chr5 (50-136)||(37809912-37809998)
chr5 (44-130)||(38297511-38297597)
chr5 (75-136)||(13703275-13703336)
chr5 (44-119)||(7834062-7834137)
chr5 (67-136)||(10889168-10889237)
chr5 (36-134)||(2133890-2133986)
chr5 (50-136)||(12784423-12784509)
chr5 (50-136)||(37633829-37633915)
chr5 (66-145)||(7734755-7734834)
chr5 (50-136)||(12722939-12723025)
chr5 (37-131)||(26906630-26906724)
chr5 (78-132)||(31803118-31803172)
chr5 (36-133)||(7408470-7408567)
chr5 (36-92)||(4694903-4694959)
chr5 (36-108)||(4962194-4962266)
chr5 (36-136)||(25027555-25027655)
chr5 (36-136)||(38502784-38502884)
chr5 (50-129)||(5842980-5843059)
chr5 (78-136)||(18000513-18000571)
chr5 (37-99)||(23418686-23418748)
chr5 (50-136)||(39893789-39893875)
chr5 (75-136)||(425302-425362)
chr5 (36-137)||(9958862-9958963)
chr5 (75-136)||(38308106-38308167)
chr5 (75-119)||(4688818-4688862)
[»] chr4 (82 HSPs)
chr4 (36-136)||(8735549-8735649)
chr4 (36-136)||(53599770-53599870)
chr4 (36-136)||(39671485-39671585)
chr4 (36-136)||(44217866-44217966)
chr4 (36-138)||(12252252-12252354)
chr4 (36-141)||(22828380-22828485)
chr4 (36-136)||(44069191-44069291)
chr4 (35-130)||(34464436-34464531)
chr4 (36-134)||(5374336-5374434)
chr4 (36-133)||(35231850-35231947)
chr4 (36-136)||(44013897-44013997)
chr4 (36-136)||(52061718-52061818)
chr4 (36-139)||(16464763-16464866)
chr4 (36-138)||(38617291-38617391)
chr4 (36-139)||(46872081-46872183)
chr4 (36-138)||(13629175-13629277)
chr4 (36-137)||(42513008-42513110)
chr4 (36-134)||(54231699-54231797)
chr4 (36-137)||(56576087-56576188)
chr4 (36-116)||(16664401-16664481)
chr4 (36-136)||(22678293-22678393)
chr4 (36-136)||(35232282-35232382)
chr4 (36-136)||(39683698-39683798)
chr4 (36-129)||(26906380-26906473)
chr4 (36-136)||(21044732-21044831)
chr4 (36-136)||(26620335-26620435)
chr4 (35-119)||(29295513-29295597)
chr4 (59-136)||(9834463-9834540)
chr4 (36-129)||(48782359-48782452)
chr4 (36-136)||(6195184-6195284)
chr4 (36-136)||(33755015-33755115)
chr4 (36-140)||(55703080-55703184)
chr4 (36-119)||(36408883-36408966)
chr4 (36-119)||(36423049-36423132)
chr4 (36-138)||(36659409-36659511)
chr4 (36-137)||(19093136-19093237)
chr4 (36-137)||(19527203-19527304)
chr4 (36-136)||(31984136-31984236)
chr4 (36-136)||(42099868-42099968)
chr4 (36-119)||(3436068-3436151)
chr4 (36-119)||(50623573-50623656)
chr4 (36-137)||(44549803-44549903)
chr4 (36-136)||(354126-354226)
chr4 (36-137)||(32239556-32239661)
chr4 (36-130)||(47884977-47885071)
chr4 (36-129)||(23237790-23237883)
chr4 (36-100)||(8741644-8741708)
chr4 (36-139)||(31861967-31862070)
chr4 (36-115)||(37502182-37502261)
chr4 (36-119)||(42645421-42645504)
chr4 (50-140)||(30939329-30939419)
chr4 (36-126)||(38542270-38542360)
chr4 (76-138)||(47428719-47428781)
chr4 (58-136)||(52677150-52677228)
chr4 (36-118)||(53125240-53125322)
chr4 (36-137)||(55147043-55147145)
chr4 (36-137)||(47251573-47251674)
chr4 (75-136)||(55935306-55935367)
chr4 (50-133)||(33809261-33809344)
chr4 (39-138)||(42629480-42629579)
chr4 (36-118)||(18781639-18781721)
chr4 (80-138)||(38009748-38009806)
chr4 (50-139)||(3036557-3036646)
chr4 (36-129)||(33084638-33084726)
chr4 (75-136)||(49089105-49089166)
chr4 (78-138)||(9220023-9220083)
chr4 (80-136)||(34603828-34603884)
chr4 (94-137)||(38027558-38027601)
chr4 (36-139)||(40412103-40412206)
chr4 (36-138)||(6091335-6091437)
chr4 (75-136)||(33751327-33751388)
chr4 (75-136)||(43888180-43888241)
chr4 (80-143)||(8456888-8456951)
chr4 (80-139)||(48087902-48087961)
chr4 (102-136)||(23621577-23621611)
chr4 (36-142)||(23719762-23719868)
chr4 (44-126)||(29832354-29832436)
chr4 (94-136)||(36408970-36409012)
chr4 (94-136)||(36423136-36423178)
chr4 (43-137)||(45725703-45725797)
chr4 (36-81)||(47093972-47094017)
chr4 (37-129)||(47596604-47596696)
[»] chr2 (45 HSPs)
chr2 (36-136)||(15893566-15893666)
chr2 (36-138)||(26342737-26342839)
chr2 (36-137)||(10812356-10812457)
chr2 (36-136)||(44360590-44360690)
chr2 (36-139)||(41885782-41885885)
chr2 (36-137)||(14295742-14295843)
chr2 (36-137)||(14308550-14308651)
chr2 (36-137)||(36375730-36375831)
chr2 (36-137)||(37093606-37093707)
chr2 (36-136)||(3363741-3363841)
chr2 (36-136)||(15182987-15183087)
chr2 (36-136)||(14288588-14288686)
chr2 (36-137)||(19594507-19594608)
chr2 (38-127)||(28145566-28145657)
chr2 (36-136)||(34399359-34399459)
chr2 (36-131)||(30264593-30264688)
chr2 (36-139)||(34357335-34357438)
chr2 (36-133)||(3376266-3376363)
chr2 (48-136)||(1259615-1259703)
chr2 (38-138)||(14284243-14284342)
chr2 (35-137)||(11222301-11222403)
chr2 (36-134)||(13965764-13965862)
chr2 (42-136)||(38072218-38072312)
chr2 (36-137)||(478958-479059)
chr2 (36-145)||(11560024-11560133)
chr2 (48-138)||(31011702-31011792)
chr2 (36-133)||(10263914-10264010)
chr2 (36-136)||(25558172-25558272)
chr2 (36-136)||(15677283-15677377)
chr2 (48-115)||(38186059-38186126)
chr2 (55-137)||(34262807-34262889)
chr2 (45-136)||(4654885-4654976)
chr2 (36-119)||(36404844-36404927)
chr2 (50-133)||(43077463-43077546)
chr2 (50-136)||(13849701-13849787)
chr2 (75-136)||(8443874-8443935)
chr2 (36-136)||(13754112-13754212)
chr2 (36-136)||(9706944-9707044)
chr2 (50-138)||(13215564-13215652)
chr2 (80-136)||(37354190-37354246)
chr2 (36-137)||(35158336-35158437)
chr2 (75-127)||(14541527-14541579)
chr2 (79-139)||(25787527-25787587)
chr2 (75-136)||(31024926-31024987)
chr2 (48-136)||(13000897-13000985)
[»] chr6 (44 HSPs)
chr6 (36-137)||(364525-364626)
chr6 (36-137)||(3621747-3621848)
chr6 (36-136)||(1751415-1751515)
chr6 (36-136)||(24663536-24663636)
chr6 (36-136)||(22050205-22050305)
chr6 (36-139)||(17123966-17124069)
chr6 (36-139)||(32359421-32359524)
chr6 (36-146)||(3850477-3850587)
chr6 (43-136)||(17193322-17193415)
chr6 (36-136)||(12732332-12732432)
chr6 (36-136)||(17836050-17836150)
chr6 (36-138)||(23923695-23923797)
chr6 (36-137)||(26470706-26470807)
chr6 (47-136)||(30388934-30389023)
chr6 (36-136)||(7056124-7056224)
chr6 (36-136)||(8176590-8176690)
chr6 (36-136)||(30416059-30416159)
chr6 (36-119)||(373880-373963)
chr6 (36-125)||(8992705-8992795)
chr6 (36-125)||(9017152-9017242)
chr6 (50-140)||(31244729-31244819)
chr6 (48-137)||(1252335-1252424)
chr6 (36-127)||(7632030-7632121)
chr6 (47-134)||(53798-53886)
chr6 (36-136)||(9838106-9838206)
chr6 (36-143)||(26485662-26485769)
chr6 (36-126)||(1924009-1924099)
chr6 (50-134)||(11129002-11129086)
chr6 (55-139)||(24356035-24356119)
chr6 (36-136)||(24949264-24949364)
chr6 (75-136)||(17251239-17251300)
chr6 (36-133)||(23777453-23777550)
chr6 (75-136)||(34379055-34379116)
chr6 (36-136)||(34607255-34607355)
chr6 (48-142)||(1249708-1249802)
chr6 (50-136)||(11676599-11676685)
chr6 (36-129)||(22784659-22784752)
chr6 (75-136)||(34730756-34730816)
chr6 (36-119)||(11431158-11431241)
chr6 (42-132)||(17601121-17601211)
chr6 (75-136)||(19645706-19645767)
chr6 (37-86)||(27313661-27313710)
chr6 (104-137)||(27605415-27605448)
chr6 (75-136)||(33260901-33260962)
[»] chr3 (69 HSPs)
chr3 (36-136)||(34266429-34266529)
chr3 (36-138)||(47069844-47069946)
chr3 (36-136)||(29803805-29803905)
chr3 (36-140)||(53745267-53745371)
chr3 (36-138)||(35315289-35315391)
chr3 (36-133)||(790707-790804)
chr3 (36-137)||(19550403-19550504)
chr3 (36-133)||(29698148-29698245)
chr3 (36-137)||(43554546-43554647)
chr3 (36-136)||(27483777-27483877)
chr3 (36-136)||(42671879-42671979)
chr3 (36-136)||(54106420-54106520)
chr3 (36-138)||(51219080-51219185)
chr3 (36-137)||(32980797-32980898)
chr3 (36-137)||(43945536-43945637)
chr3 (37-136)||(45101347-45101446)
chr3 (36-138)||(27992397-27992499)
chr3 (36-129)||(46973580-46973673)
chr3 (36-125)||(54898086-54898175)
chr3 (36-136)||(29651825-29651925)
chr3 (36-136)||(45145285-45145385)
chr3 (36-136)||(52627227-52627327)
chr3 (36-136)||(36234524-36234621)
chr3 (37-130)||(52663600-52663693)
chr3 (36-128)||(6902435-6902527)
chr3 (36-136)||(13158428-13158528)
chr3 (36-136)||(33491128-33491228)
chr3 (36-136)||(39866839-39866938)
chr3 (37-117)||(51697571-51697651)
chr3 (36-139)||(40139828-40139923)
chr3 (40-129)||(41168916-41169008)
chr3 (66-136)||(45513307-45513377)
chr3 (47-133)||(51244792-51244878)
chr3 (36-129)||(24981447-24981540)
chr3 (67-135)||(13168193-13168261)
chr3 (36-136)||(43775379-43775479)
chr3 (36-138)||(45055344-45055446)
chr3 (48-136)||(49123694-49123779)
chr3 (36-136)||(41926835-41926937)
chr3 (48-136)||(41425798-41425886)
chr3 (36-139)||(41351180-41351283)
chr3 (36-119)||(54911308-54911390)
chr3 (36-137)||(3643184-3643285)
chr3 (137-181)||(11660958-11661002)
chr3 (47-136)||(20105349-20105430)
chr3 (50-138)||(20848711-20848799)
chr3 (38-136)||(2858566-2858664)
chr3 (50-136)||(33874535-33874621)
chr3 (36-130)||(48152142-48152236)
chr3 (48-137)||(33074266-33074355)
chr3 (48-137)||(40318916-40319005)
chr3 (59-139)||(7329004-7329084)
chr3 (36-119)||(17102911-17102994)
chr3 (36-119)||(25983669-25983751)
chr3 (60-130)||(31610081-31610151)
chr3 (38-119)||(28885836-28885917)
chr3 (75-136)||(40010653-40010714)
chr3 (80-136)||(47843832-47843888)
chr3 (48-119)||(29458209-29458280)
chr3 (55-134)||(52173923-52174000)
chr3 (79-137)||(26748552-26748610)
chr3 (50-136)||(32853349-32853435)
chr3 (75-137)||(42515162-42515224)
chr3 (36-138)||(48214212-48214314)
chr3 (36-136)||(30861533-30861631)
chr3 (80-137)||(35458492-35458549)
chr3 (88-137)||(53290749-53290798)
chr3 (83-139)||(28226620-28226676)
chr3 (80-136)||(50092146-50092202)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-136)||(77245-77345)
[»] scaffold0024 (2 HSPs)
scaffold0024 (36-138)||(49303-49405)
scaffold0024 (69-139)||(89360-89430)
[»] scaffold0172 (1 HSPs)
scaffold0172 (36-136)||(26111-26211)
[»] scaffold0040 (1 HSPs)
scaffold0040 (36-137)||(69257-69357)
[»] scaffold0886 (1 HSPs)
scaffold0886 (36-135)||(4672-4770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (36-136)||(148460-148560)
scaffold0002 (67-135)||(138727-138795)
[»] scaffold0831 (1 HSPs)
scaffold0831 (36-136)||(2964-3066)
[»] scaffold0343 (1 HSPs)
scaffold0343 (50-136)||(7595-7681)
[»] scaffold0009 (1 HSPs)
scaffold0009 (50-139)||(147108-147197)
[»] scaffold0014 (1 HSPs)
scaffold0014 (36-138)||(195569-195671)
[»] scaffold0135 (1 HSPs)
scaffold0135 (78-138)||(30674-30734)
[»] scaffold0001 (1 HSPs)
scaffold0001 (36-136)||(419476-419576)
[»] scaffold0274 (1 HSPs)
scaffold0274 (75-136)||(224-284)
[»] scaffold2146 (1 HSPs)
scaffold2146 (75-137)||(748-810)
[»] scaffold1213 (1 HSPs)
scaffold1213 (36-86)||(1-51)
[»] scaffold0236 (1 HSPs)
scaffold0236 (43-131)||(14239-14327)


Alignment Details
Target: chr1 (Bit Score: 84; Significance: 6e-40; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 36 - 143
Target Start/End: Original strand, 30686568 - 30686675
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  30686568 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaacgtgacaattaaaaaggaacggaggtagt 30686667  T
Q  136 atttgtta 143  Q
    ||| ||||    
T  30686668 attagtta 30686675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 35531375 - 35531271
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  35531375 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 35531276  T
Q  136 atttg 140  Q
    |||||    
T  35531275 atttg 35531271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 29830910 - 29831013
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  29830910 taaaagtatagcttattgcatcaaaagtaatatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 29831009  T
Q  136 attt 139  Q
    ||||    
T  29831010 attt 29831013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 43500663 - 43500763
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  43500663 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 43500762  T
Q  136 a 136  Q
    |    
T  43500763 a 43500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 1024713 - 1024813
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  1024713 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 1024812  T
Q  136 a 136  Q
    |    
T  1024813 a 1024813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13566836 - 13566936
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  13566836 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 13566935  T
Q  136 a 136  Q
    |    
T  13566936 a 13566936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 38648614 - 38648714
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  38648614 taaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagt 38648713  T
Q  136 a 136  Q
    |    
T  38648714 a 38648714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 12124801 - 12124903
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| ||||||  |||||||||||||||||| ||||||| |||||||    
T  12124801 taaaagtataacttattgcatcaaaagtagcatcaattgttgattatcttgatttgtgtaaaatggcaaaatgtgacaattaaaaaggaacgaaggtagt 12124900  T
Q  136 att 138  Q
    |||    
T  12124901 att 12124903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 20605704 - 20605598
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| | ||| |||||||||    
T  20605704 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaatgaatggaggtagt 20605605  T
Q  136 atttgtt 142  Q
    |||||||    
T  20605604 atttgtt 20605598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 8464337 - 8464236
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||| ||||||||| |||||    
T  8464337 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagtagt 8464238  T
Q  136 at 137  Q
    ||    
T  8464237 at 8464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 49497309 - 49497402
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||| |||||||||    
T  49497309 taaaagtataacttattgcatcaaaaataatatcaattgttaattgtcttagtttgtataaaatatcaaaatgtaacaattaaaaaggaacgga 49497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 1677355 - 1677455
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||||||    
T  1677355 taaaagtatagcttattgcattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggagcggaggtagt 1677454  T
Q  136 a 136  Q
    |    
T  1677455 a 1677455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 12231151 - 12231051
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  12231151 taaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 12231052  T
Q  136 a 136  Q
    |    
T  12231051 a 12231051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 1429441 - 1429541
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||| |||| |||||||||  ||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  1429441 taaaagtatagcttattgcatcaaaagtagtatcatttgtagattgtcttagtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacgaaggtagt 1429540  T
Q  136 a 136  Q
    |    
T  1429541 a 1429541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13507927 - 13508027
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||| |||||| |||||||| |||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||||||    
T  13507927 taaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagt 13508026  T
Q  136 a 136  Q
    |    
T  13508027 a 13508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13515115 - 13515215
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||| |||||| |||||||| |||||||||||||||| | |||||| ||||||||||| ||||||| |||||||||||||||    
T  13515115 taaaagtatagcttattgcatccaaagtagtatcaattattgattgtcttgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagt 13515214  T
Q  136 a 136  Q
    |    
T  13515215 a 13515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 19349459 - 19349359
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||| | ||||||    
T  19349459 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcagaatgtgacaattaaaaaggaacagtggtagt 19349360  T
Q  136 a 136  Q
    |    
T  19349359 a 19349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 35483861 - 35483761
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||| |||||| ||||||| ||||||||||| | |||||||||||||    
T  35483861 taaaagtatagcttattgcatcaaaaataatatcaattgttgattgttttggtttgtgtaaaatgtcaaaatatgacaattaaaaaagaacggaggtagt 35483762  T
Q  136 a 136  Q
    |    
T  35483761 a 35483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 45226657 - 45226574
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  45226657 taaaagtatagcttattacatcaaaagtagtatcaattgttgattgtcttaatttgtataaaatgtcaaaatgtgacaattaaa 45226574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 37609381 - 37609284
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||||| ||||    
T  37609381 taaaagtatagcttattgcatcaaaagta---tcaattgttgattgtcttgatttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagt 37609285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 45368245 - 45368346
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||| |||||| |||||||| |||||||||| | |||| ||||||||    
T  45368245 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaagaactgaggtagt 45368344  T
Q  136 at 137  Q
    ||    
T  45368345 at 45368346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 37437133 - 37437033
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||  |||||||| |||||||||||| ||||| |||||| ||||||| ||||||||||| |||||| ||||||||    
T  37437133 taaaagtatagcttattgcatcaaaagtggtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacagaggtagt 37437034  T
Q  136 a 136  Q
    |    
T  37437033 a 37437033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 7783107 - 7783197
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    ||||||||||  | ||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||    
T  7783107 taaaagtatagttaattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatgtcaaaatgtgacaattaaaaaggaac 7783197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 21927776 - 21927678
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||  ||||| |||||| ||  ||||||||||||||| ||||||||| |||||    
T  21927776 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttagtttgtgtaaaatgtc--aatgtgacaattaaaaaggaacggatgtagt 21927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 40926833 - 40926732
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||| ||| ||| | |||||| ||||||||||||||||||| | |||||||||||||    
T  40926833 taaaagtataacttattgtatcaaaagtagtaacaattattgattgtattggtttatgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagt 40926734  T
Q  136 at 137  Q
    ||    
T  40926733 at 40926732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 2059890 - 2059792
Alignment:
Q  38 aaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||||||||||| ||| || ||||| |||||| | ||| ||||| |||||| ||||||||||||||||||| ||||| ||||||||||    
T  2059890 aaagtataacttattgcatcaaatgtagtaacaattattgattattttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagta 2059792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 19929546 - 19929449
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||||||||||||||||||||||  | ||||| |||||||||||| ||||| |||||| | ||||  ||||||||||| |||||||||||||    
T  19929546 taaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggaggta 19929449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 50825652 - 50825553
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||||||| |||||  ||||| |||||| |||||||||||| |  ||||||||||||    
T  50825652 taaaagtataacttattgcatcaaaagtagtagcaat-gttgattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaaaaacggaggtagt 50825554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 28679178 - 28679261
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||| ||||||||||||||||| ||| ||||||| |||||||| |||| |||||||| ||||||||||| |||||||    
T  28679178 taaaagtataatttattgcatcaaaagtagtataaattgttaattgtcttaatttatataaaatgtcaaaatgtgataattaaa 28679261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 32168378 - 32168292
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  32168378 attgtatcaaaagtagtaccatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 32168292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 51613582 - 51613668
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| ||||| || |||||||||||| ||||| |||||||| |||| |||||||||||| ||||||||||||||||    
T  51613582 attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaaaatataaaaaagtgacaattaaaaaggaacggaggtagta 51613668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 10676059 - 10676160
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| ||||||||||||||||||||||| ||||  |||| | | ||||||| | |||||| ||||||||||| ||||||| |||||| ||||||||    
T  10676059 taaaagtacaacttattgcatcaaaagtaataacaatcattgactatattgatttatgtaaaatgtcaaaatgtgataattaaaaaggaacagaggtagt 10676158  T
Q  136 at 137  Q
    ||    
T  10676159 at 10676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 49908247 - 49908166
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||||| ||||||||||||||||||||  || ||||||||| ||||||||||| ||||||| || ||||||    
T  49908247 ttattgcatcaaaagtagtatcaattgttgattgtcttagttcgtataaaatgtcaaaatgtgataattaaaaagtaacgga 49908166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 18033904 - 18033805
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||| |||||||||||||||  | ||||||||||||||||||||| ||||  ||||||   ||||||||||||||||| ||||||||||||||||    
T  18033904 aaaaatatagcttattgcatcaaaatgagtatcaattgttgattgtcttggtttgcgtaaaatga-aaaatgtgacaattaaaaaggaacggaggtagta 18033806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 35255643 - 35255739
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    |||||| ||||||||||||||||||||||| | ||||| |||||||||||| ||| | |||||| |||||| |||||||||||| || ||| |||||    
T  35255643 taaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaagtaacagaggt 35255739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 35700455 - 35700355
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| | |||||  |||||||||| || || || |||||||||||||||||| |||||||||| ||  ||||||||||| |||||||||||||||    
T  35700455 taaaagtatcaattattatatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacggaggtagt 35700356  T
Q  136 a 136  Q
    |    
T  35700355 a 35700355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 51972361 - 51972261
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||| | ||||||||||| |||||| |||||| |||||| || ||||||||| |  ||| ||||||||    
T  51972361 taaaagtataacttattgcatcaaaagtagtaacaactattgattgtcttaatttgtgtaaaatgtcaaaaagtaacaattaaaaaataacagaggtagt 51972262  T
Q  136 a 136  Q
    |    
T  51972261 a 51972261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 13699331 - 13699434
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| ||||||| || |||||||| |||||||||| ||||    
T  13699331 taaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatatggcaattaaaaaggaacggagatagt 13699430  T
Q  136 attt 139  Q
    ||||    
T  13699431 attt 13699434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 39412591 - 39412500
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacg 127  Q
    ||||| |||||||||||||||||||||||  | ||||| |||||||| ||| |||||||||||| | |||| |||||||||||| |||||||    
T  39412591 taaaaatataacttattgcatcaaaagtagaaacaattattgattgttttggtttgtataaaatgttaaaaagtgacaattaaaaaggaacg 39412500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 44182916 - 44183009
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||| ||||||  |||||| |||||||||||| |||||||||||| ||||| ||||||   ||||||||||||||||| ||||||||||    
T  44182916 taaaagtatatcttattatatcaaa-gtaatatcaatttttgattgtcttggtttgtgtaaaatgctaaaatgtgacaattaaaaaggaacggag 44183009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 31588820 - 31588715
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||| |||||||||| ||| |||| |||||| ||||| ||||| ||||||   ||||||||||||||||| | ||||| |||||||    
T  31588820 taaaagtatagcttattgtatcaaaagtagtattaatttttgattatcttggtttgtgtaaaatgctaaaatgtgacaattaaaaaagaacgtaggtagt 31588721  T
Q  136 atttgt 141  Q
    | ||||    
T  31588720 agttgt 31588715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 52749172 - 52749265
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||  |||||||||||||| || |||||||||||||||||||||||| || |||||| ||||||| | || |||||| | |||||||    
T  52749172 taaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttgattcgtgtaaaatgtcaaaatataacgattaaaaatgaacgga 52749265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 32994549 - 32994450
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| ||  |||| |||||||||||| ||||| |||||| ||||||   |||||||||| | |||||||||||||    
T  32994549 taaaagtacaacttattgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaaaaagacaattaaa-aagaacggaggtagt 32994451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 5598216 - 5598295
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||| ||  |||| |||||||||||| ||||| |||||| ||||||| ||||||||||| |||||||||    
T  5598216 attgcatcaaaagtagtaataattattgattgtcttggtttgtgtaaaatgtcaaaatatgacaattaaaaaggaacgga 5598295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 48174723 - 48174656
Alignment:
Q  66 tatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||| || |||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||    
T  48174723 tatcatttattgattgtcttgatttgtgtaaaatatcaaaaagtgataattaaaaaggaacggaggta 48174656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 4100975 - 4100889
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||||||||| || || |||||||||||  ||||| ||||||||||||| || | ||||||| ||||||||||||||||    
T  4100975 attgtatcaaaagtaataacatttattgattgtcttagtttgtgtaaaatatcaaaaagtaataattaaaaaggaacggaggtagta 4100889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 31487820 - 31487762
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||    
T  31487820 ttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 31487762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 10506971 - 10507068
Alignment:
Q  39 aagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| | ||||||||||||||||| ||  | || |||||||||||||||||| |||||||||| ||  ||||||||||| ||||||| || |||||    
T  10506971 aagtatcaattattgcatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacgtagttagta 10507068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 52649797 - 52649713
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    |||||| |||||||||| || || || ||||||||||||||| ||  ||||| |||||| |||||||||||| ||||||||||||    
T  52649797 ttattgtatcaaaagtagtaacatttattgattgtcttgattagtgaaaaatgtcaaaaagtgacaattaaaaaggaacggaggt 52649713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 9362169 - 9362232
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| |||||||||||||||||||| |||||| |||||| ||||| ||||||||||||| ||||    
T  9362169 ttgagtgtcttgatttgtataaaatgtcaaaaagtgacagttaaaaaggaacggaggtaatatt 9362232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 9127826 - 9127916
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    ||||||||||  |||||| |||||||||| || || || |||| ||||||| ||||| |||||| |||||| |||||||||||| ||||||    
T  9127826 taaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaac 9127916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 37735205 - 37735119
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| ||||| || |||||||||||| ||||  |||||| | |||| |||| ||||||| ||||||||||||||||    
T  37735205 attgtatcaaaagtagtatcatttattgattgtcttggtttgcgtaaaatttgaaaaagtgataattaaaaaggaacggaggtagta 37735119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 48508302 - 48508392
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||||| ||||||||||| | || || |||||| | ||| |||||||||||| ||||||||||||||||||| || ||||| | |||||||    
T  48508302 ttattgtatcaaaagtaacaacatttattgattattttggtttgtataaaatgtcaaaatgtgacaattaaaaagaaacggtgatagtatt 48508392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 33720688 - 33720777
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||| ||||||| || ||||| || |||||  ||||| ||||| |||||||||||||||| ||||||||| || |||||| |||||||||    
T  33720688 attgtatcaaaaatagtatcatttattgataatcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggatgtagtattt 33720777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 32348135 - 32348234
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| |  ||||| |||||||||| ||  | || |||||||| ||| ||||| |||||| |||||| |||||||||||| |||||||||||||||    
T  32348135 taaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacggaggtagt 32348233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 36850813 - 36850885
Alignment:
Q  55 atcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacg 127  Q
    |||||||||| || || || |||| ||||||||||||| |||||||||||||  ||||||||||| |||||||    
T  36850813 atcaaaagtagtaacatttattgactgtcttgatttgtgtaaaatatcaaaaaatgacaattaaaaaggaacg 36850885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 48264810 - 48264754
Alignment:
Q  82 tcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||| |||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  48264810 tcttggtttgtataaaacgtcaaaatgtgacaattaaaaagaaacggaggtagtatt 48264754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 46096703 - 46096785
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaa 118  Q
    ||||||||| |  ||||| |||||||||| ||  | || |||||||| ||||| ||||||||||||||||| |||||||||||    
T  46096703 taaaagtatgaaatattgtatcaaaagtagtaatatttattgattgtattgatgtgtataaaatatcaaaaagtgacaattaa 46096785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 30702370 - 30702281
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaa 125  Q
    |||||||||||  ||||| |||||||||  || || || |||||||| ||| ||||| |||||| |||||| |||||||||||| |||||    
T  30702370 taaaagtataaaatattgtatcaaaagtggtaacatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaa 30702281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 51974251 - 51974154
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||  |||||| |||||||||| ||  | || |||| ||| ||| || || |||||| |||||| |||||||||||| |||||||||||||    
T  51974251 taaaagtatacattattgtatcaaaagtagtaatatttattgaatgttttggttcgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggta 51974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 36318521 - 36318609
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| |||||||||| |  || || |||| ||| ||| ||||| |||| | |||||| |||||||||||| ||||||||||||||||    
T  36318521 ttattgtatcaaaagtagtgacatttattgaatgtattggtttgtgtaaattgtcaaaaagtgacaattaaaaaggaacggaggtagta 36318609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 137
Target Start/End: Original strand, 42800277 - 42800364
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||| ||||| |||| || || || |||||||| ||| ||||| |||||| |||||| |||||||||||| ||||| | |||||||||    
T  42800277 attgtatcaagagtagtaacatttattgattgttttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatgaaggtagtat 42800364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 42787194 - 42787136
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||||   |||||| ||||||  ||||||||||| |||||||||||||    
T  42787194 ttgattgtcttgatttaggtaaaatgtcaaaaaatgacaattaaaaaggaacggaggta 42787136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 43809061 - 43809155
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||| || | |||| |||||||| | || || || ||||||||||| |||| | |||||| | |||| |||||||||||| ||||||||||    
T  43809061 taaaagtaaaaataattgtatcaaaagcagtaacacttattgattgtcttaatttatgtaaaatgttaaaaagtgacaattaaaaaggaacggag 43809155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 118
Target Start/End: Original strand, 43952975 - 43953017
Alignment:
Q  76 tgattgtcttgatttgtataaaatatcaaaatgtgacaattaa 118  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||    
T  43952975 tgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaa 43953017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 1039113 - 1039069
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||||| |||||| | |||| ||||||||||||    
T  1039113 ttgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaa 1039069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 1046019 - 1045975
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||||| |||||| | |||| ||||||||||||    
T  1046019 ttgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaa 1045975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 18344531 - 18344583
Alignment:
Q  84 ttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||| |||||| | |||| |||||||||||| | ||||||||||||||    
T  18344531 ttgatttgtgtaaaatgttaaaaagtgacaattaaaaatgaacggaggtagta 18344583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 38569658 - 38569618
Alignment:
Q  79 ttgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  38569658 ttgtcttgatttgtataaaaagtcaaaatatgacaattaaa 38569618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 8311 - 8413
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  8311 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 8410  T
Q  136 att 138  Q
    |||    
T  8411 att 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 38482875 - 38482774
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  38482875 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 38482776  T
Q  136 at 137  Q
    ||    
T  38482775 at 38482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 38128630 - 38128529
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  38128630 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagt 38128531  T
Q  136 at 137  Q
    ||    
T  38128530 at 38128529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 14263701 - 14263801
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | |||||||| ||||    
T  14263701 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggagttagt 14263800  T
Q  136 a 136  Q
    |    
T  14263801 a 14263801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 39303599 - 39303496
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgac-aattaaagaggaacggaggtag 134  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||    
T  39303599 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaaattaaaaaggaacggaggtag 39303500  T
Q  135 tatt 138  Q
    ||||    
T  39303499 tatt 39303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 11994038 - 11994138
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||    
T  11994038 taaaagtatagcttattgcatcaaaagtagtatcaattgtttattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagt 11994137  T
Q  136 a 136  Q
    |    
T  11994138 a 11994138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 34981986 - 34982086
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  34981986 taaaagtatagcttattgcatcaaaagtagtattaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 34982085  T
Q  136 a 136  Q
    |    
T  34982086 a 34982086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 35052210 - 35052310
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  35052210 taaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 35052309  T
Q  136 a 136  Q
    |    
T  35052310 a 35052310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 15596501 - 15596604
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||| ||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  15596501 taaaagtataacttattgcataaaaagtaataacaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 15596600  T
Q  136 attt 139  Q
    ||||    
T  15596601 attt 15596604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 23430066 - 23430166
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||||| |||||| ||||| |||||||||    
T  23430066 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacgattaaaaaggaatggaggtagt 23430165  T
Q  136 a 136  Q
    |    
T  23430166 a 23430166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 9954806 - 9954909
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | ||||| ||||||||||| ||||| | |||||||    
T  9954806 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgttaaaatatgacaattaaaaaggaatgaaggtagt 9954905  T
Q  136 attt 139  Q
    ||||    
T  9954906 attt 9954909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 26062864 - 26062963
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||| |||||||||    
T  26062864 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagt 26062963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 14228405 - 14228305
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||  ||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | |||||||||||||    
T  14228405 taaaagtatagcttatgacatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggaggtagt 14228306  T
Q  136 a 136  Q
    |    
T  14228305 a 14228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 33935143 - 33935043
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||||||||||||||||||| ||||||| |||||||    
T  33935143 taaaattatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgaaggtagt 33935044  T
Q  136 a 136  Q
    |    
T  33935043 a 33935043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 1202527 - 1202444
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  1202527 taaaagtataacttattgcatcaaaaatagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaaa 1202444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 18291620 - 18291722
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||  |||| | ||||||||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  18291620 taaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttgatttttgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 18291719  T
Q  136 att 138  Q
    |||    
T  18291720 att 18291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 25703661 - 25703560
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| ||||||| ||| ||||||||||| ||||| ||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  25703661 taaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagt 25703562  T
Q  136 at 137  Q
    ||    
T  25703561 at 25703560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 25812832 - 25812731
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| ||||||| ||| ||||||||||| ||||| ||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  25812832 taaaagtatagcttattgcataaaaagtagtattaattgttgattatcttgttttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagt 25812733  T
Q  136 at 137  Q
    ||    
T  25812732 at 25812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 8453319 - 8453219
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| ||||||||||||||||| || ||||| |||||| ||||  ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  8453319 taaaagtataatttattgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 8453220  T
Q  136 a 136  Q
    |    
T  8453219 a 8453219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13328127 - 13328227
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| || ||||||| |||||||| |||||||||||  ||||| |||||| ||||||||||||||||||| |||||||||| ||||    
T  13328127 taaaagtataacttattgtattaaaagtagtatcaatttttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggagatagt 13328226  T
Q  136 a 136  Q
    |    
T  13328227 a 13328227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 1245469 - 1245562
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||||||||||| | |||||| |||||| |||||||||||| |||||||||    
T  1245469 taaaagtataacttattgaatcaaaagtagtaacaattattgattgtcttgatttatgtaaaatgtcaaaaagtgacaattaaaaaggaacgga 1245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 43642072 - 43641963
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| ||||||||||||||||| || ||||| |||||||||||  ||||| |||||| |||||| |||||||||||| |||||| || ||| |    
T  43642072 taaaagtataatttattgcatcaaaagtagtaacaattattgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagatgtaat 43641973  T
Q  136 atttgttaag 145  Q
    ||||||||||    
T  43641972 atttgttaag 43641963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 45281461 - 45281360
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| | |||||||||||||||||  ||||||||| ||||    
T  45281461 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaagggaacggagctagt 45281362  T
Q  136 at 137  Q
    ||    
T  45281361 at 45281360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 23848627 - 23848539
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||| | |||| ||||||||||||||||||| |||||| |||||||||    
T  23848627 ttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtcaaatgtcaaaatgtgacaattaaaaaggaacagaggtagta 23848539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 4057445 - 4057535
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    |||||||||| ||||| |||| ||||||| ||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||| ||||||    
T  4057445 taaaagtatagcttatggcataaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaac 4057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 16656857 - 16656955
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||||  |||||||||||||| || ||||||||||||| ||||||| ||||| |||||| ||||||||||||||||||| || |||||| ||||    
T  16656857 taaaagtatagtttattgcatcaaaattagtatcaattgttgagtgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtag 16656955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 40228452 - 40228541
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaa 125  Q
    |||||||| | ||||||||||||||| || ||||||||||||||||||||| ||||| |||||  ||||||||||||||||||| |||||    
T  40228452 taaaagtacagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaa 40228541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 18842698 - 18842786
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| |||||||||| || || || |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  18842698 ttattgtatcaaaagtagtaacatttattgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 18842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 14061232 - 14061129
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| |||||| |||||||||| ||  | || |||||||||||| ||||| |||||| | |||| |||||||||||| |||||||||||||||    
T  14061232 taaaagtataaattattgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagt 14061133  T
Q  136 attt 139  Q
    ||||    
T  14061132 attt 14061129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 32010167 - 32010067
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| ||||||||||||||||| || ||||| |||||||||||| |||||  ||||| | |||| |||||||||||| | ||||||| |||||    
T  32010167 taaaagtataaattattgcatcaaaagtagtagcaattattgattgtcttggtttgtgaaaaatgttaaaaagtgacaattaaaaatgaacggaagtagt 32010068  T
Q  136 a 136  Q
    |    
T  32010067 a 32010067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 34047008 - 34047100
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgg 128  Q
    ||||||||||  |||||||||||||| || ||||||||||||||  ||||| ||||| |||||| ||||||||||||||||||| ||| ||||    
T  34047008 taaaagtatagtttattgcatcaaaaatagtatcaattgttgatattcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggtacgg 34047100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Complemental strand, 2888539 - 2888448
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||||| ||||||||||  | || || |||||||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||||||||    
T  2888539 ttattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagtattt 2888448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 41308052 - 41308154
Alignment:
Q  36 taaaagtataacttattgca-tcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||||||||||||| ||||||||| || ||||| || ||||||||| | | | |||||| ||||||| ||||||||||| || |||||||||||    
T  41308052 taaaagtataacttattgcaatcaaaagtagtaacaattattaattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaagaaacggaggtag 41308151  T
Q  135 tat 137  Q
    |||    
T  41308152 tat 41308154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 8554087 - 8553999
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||||||  | || || |||||||||||||||||| |||||| |||||||||||||||| || ||||||| ||||||||    
T  8554087 ttattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacgaaggtagta 8553999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 10180527 - 10180627
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | ||||||||| | |||||| ||||||| ||||||||||| || |||||| |||||    
T  10180527 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttgatttatgtaaaatgtcaaaatatgacaattaaaaagaaacggatgtagt 10180626  T
Q  136 a 136  Q
    |    
T  10180627 a 10180627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 17313299 - 17313402
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| ||||||||||||||||||||||| ||||  |||| | ||||  ||| | ||| || ||||||||| |||||||||  ||||||||||||||    
T  17313299 taaaagtagaacttattgcatcaaaagtaataacaataattgactatcttcgtttatgtaagatgtcaaaatgtaacaattaaaagggaacggaggtagt 17313398  T
Q  136 attt 139  Q
    ||||    
T  17313399 attt 17313402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 26740206 - 26740120
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||| ||||| |||||| |||||| |||||||||||| ||||||| ||||||||    
T  26740206 attgtatcaaaagtagtaacacttattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgaaggtagta 26740120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 12342697 - 12342600
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| ||||||| ||||||||||| |||||| ||||||    
T  12342697 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacagaggta 12342600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 17074653 - 17074568
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||||||||||  |  | || |||||||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||    
T  17074653 ttattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggta 17074568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 17573617 - 17573702
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||||||||||  |  | || |||||||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||    
T  17573617 ttattgcatcaaaagtagcaatatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggta 17573702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 33 - 130
Target Start/End: Original strand, 31964723 - 31964820
Alignment:
Q  33 tgttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||||| | |||||| ||||||| || || || || |||||||||||| ||||| |||||| ||| ||  ||||||||||||||||||||||    
T  31964723 tgttaaaagtatcaattattgtatcaaaaatagtaacatttattgattgtcttggtttgtgtaaaatgtcataaaatgacaattaaagaggaacggag 31964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 2456198 - 2456098
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | | ||||||| | |||||| |||||||||||| |||||| || | ||||||||||    
T  2456198 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactatattgatttatgtaaaatgtcaaaatgtgacgattaaaaagaatcggaggtagt 2456099  T
Q  136 a 136  Q
    |    
T  2456098 a 2456098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 36058389 - 36058489
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | | || |||| | |||||| |||||||| |||||||||| |||||||||| ||||    
T  36058389 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactattttaatttatgtaaaatgtcaaaatgcgacaattaaaaaggaacggagatagt 36058488  T
Q  136 a 136  Q
    |    
T  36058489 a 36058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 7605982 - 7605919
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaat 99  Q
    ||||||||||||||||||||| ||||||||||   ||| |||||||||||||||||| ||||||    
T  7605982 taaaagtataacttattgcattaaaagtaataatgattattgattgtcttgatttgtgtaaaat 7605919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 40603922 - 40603871
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaat 99  Q
    ||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  40603922 ttattacatcaaaaatagtatcaattgttgattgtcttgatttgtataaaat 40603871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 11707537 - 11707443
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    ||||||||||||||| | ||||||||||| ||  |||| ||||||||||| |||| | |||||| | ||||| ||||||||||| || |||||||    
T  11707537 taaaagtataacttaatacatcaaaagtagtaataattattgattgtcttaatttatgtaaaatgtaaaaatatgacaattaaaaagaaacggag 11707443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 35296240 - 35296301
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  35296240 ttgagtgtcttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 35296301  T

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Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 41701526 - 41701465
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||    
T  41701526 ttgagtgtcttgatttgtgtaaaatattaaaaagtgacagttaaaaaggaacggaggtagta 41701465  T

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Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 6757602 - 6757665
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| ||||||||||||| |||||| |||||| |||||| | ||| ||||||||||||||||||    
T  6757602 ttgagtgtcttgatttgtgtaaaatgtcaaaaagtgacagtaaaaaaggaacggaggtagtatt 6757665  T

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Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 8672665 - 8672751
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| || || |||||| | ||| ||||| |||||||||||||  ||||||||||| ||||||||| ||||||    
T  8672665 attgtatcaaaaataataacatttattgattattttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaacggaagtagta 8672751  T

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Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 27911741 - 27911655
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||||||||| |||||| ||||||  | ||| ||||| ||| ||||||||||||    
T  27911741 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggaggtagta 27911655  T

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Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 27958160 - 27958074
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||||||||| |||||| ||||||  | ||| ||||| ||| ||||||||||||    
T  27958160 attgtatcaaaagtagtaacatttattgattgtcttgatttgtgtaaaatgtcaaaaaataacacttaaaaaggtacggaggtagta 27958074  T

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Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 29091129 - 29091075
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||||||||||| |||||| |||||| |||||||||||| | |||||||    
T  29091129 ttgattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacgga 29091075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 9808057 - 9808008
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtctt 85  Q
    ||||||||||||||||||||||||||||| ||| ||||||| ||| ||||    
T  9808057 taaaagtataacttattgcatcaaaagtagtattaattgttaattatctt 9808008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 21651829 - 21651728
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| || ||||||||||||||||| || | ||  |||  | ||||| ||| | |||||| ||||||||||||||||||| || ||||||| ||||    
T  21651829 taaaagtacaagttattgcatcaaaagtagtaacgatcattggctatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaagaaacggagttagt 21651730  T
Q  136 at 137  Q
    ||    
T  21651729 at 21651728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 30205657 - 30205713
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||||    
T  30205657 tgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaa-aggaacggagggagtat 30205713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 7483951 - 7483999
Alignment:
Q  88 tttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  7483951 tttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 7483999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 12248853 - 12248753
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| |||||||||| ||  | || |||| ||||||| || || |||||| ||||||  || |||||||| |||||||||||||||    
T  12248853 taaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcgtgtaaaatgtcaaaaactgtcaattaaaaaggaacggaggtagt 12248754  T
Q  136 a 136  Q
    |    
T  12248753 a 12248753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 23855714 - 23855814
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| || ||||| |||||||||| ||  | || |||||||| ||| ||| | |||||| ||||||  |||| |||||| |||||||||||||||    
T  23855714 taaaagtatgacgtattgtatcaaaagtagtaatatttattgattgtattggtttatgtaaaatgtcaaaaaatgacgattaaaaaggaacggaggtagt 23855813  T
Q  136 a 136  Q
    |    
T  23855814 a 23855814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 35029751 - 35029803
Alignment:
Q  84 ttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||| | ||||  ||||||||||| ||||||||||||||||    
T  35029751 ttgatttgtataaaatgttaaaaaatgacaattaaaaaggaacggaggtagta 35029803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 39615523 - 39615440
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    |||||| ||||||||||| | || || || ||||||||| ||| | |||||||||||||||||||||||||| || ||| |||||    
T  39615523 ttattgtatcaaaagtaacaaca-ttattaattgtcttggtttatgtaaaatatcaaaatgtgacaattaaaaagaaacagaggt 39615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 43553196 - 43553292
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||||||| | |||||| |||||||||| || || || |||||||||||| ||||  |||||| ||| || | |||||||||| || |||||||||    
T  43553196 taaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttgcgtaaaatgtcacaaagcgacaattaaaaagaaacggaggt 43553292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 19972475 - 19972538
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| ||||||| ||||| |||||| |||||| |||||  ||||| ||||||||||||||||||    
T  19972475 ttgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagtatt 19972538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 138
Target Start/End: Complemental strand, 21020358 - 21020295
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| ||||||| ||||| |||||| |||||| |||||  ||||| ||||||||||||||||||    
T  21020358 ttgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagtatt 21020295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 13174125 - 13174186
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| |||||| |||||| |||||| ||||| ||||||||||| ||||    
T  13174125 ttgagtgtcttggtttgtgtaaaatgtcaaaaagtgacagttaaaaaggaacggagggagta 13174186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 45317853 - 45317910
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||||| ||||| |||||  ||||||||||||||||||| |||||||| || |||||    
T  45317853 tgtcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggcgggagtat 45317910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 3513514 - 3513558
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgatt 80  Q
    |||| ||||| ||||||| ||||||||||||||||||| ||||||    
T  3513514 taaatgtatagcttattgtatcaaaagtaatatcaatttttgatt 3513558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 23793312 - 23793252
Alignment:
Q  78 attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||||||| ||||| |||||| | ||||  ||||||||||| |||||| |||||||||||    
T  23793312 attgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacagaggtagtatt 23793252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 9e-39; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 7312774 - 7312875
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||    
T  7312774 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatatcaaaatgtgacaattacaaaggaacgaaggtagt 7312873  T
Q  136 at 137  Q
    ||    
T  7312874 at 7312875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 33099921 - 33099820
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | |||||||||||||    
T  33099921 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaagaacggaggtagt 33099822  T
Q  136 at 137  Q
    ||    
T  33099821 at 33099820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 8381983 - 8382083
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||| |||||||||||||||    
T  8381983 taaaagtatatcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagt 8382082  T
Q  136 a 136  Q
    |    
T  8382083 a 8382083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 32528414 - 32528314
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | |||||||||||||    
T  32528414 taaaagtatagcttattgcatcaaaagtagcatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaatgaacggaggtagt 32528315  T
Q  136 a 136  Q
    |    
T  32528314 a 32528314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 41891427 - 41891529
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||| || ||||||||    
T  41891427 taaaagtataacttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggcacagaggtagt 41891526  T
Q  136 att 138  Q
    |||    
T  41891527 att 41891529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 12838164 - 12838064
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||| ||||| ||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  12838164 taaaggtatagcttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggatcggaggtagt 12838065  T
Q  136 a 136  Q
    |    
T  12838064 a 12838064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 32966135 - 32966032
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||| |||||| |||||| | ||||||||||||||||| ||||||||||||| |    
T  32966135 taaaagtatagcttattgcatcaaaagtggtatcaattgttgattgtcttaatttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtaat 32966036  T
Q  136 attt 139  Q
    ||||    
T  32966035 attt 32966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 31430716 - 31430816
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| ||||||||    
T  31430716 taaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagt 31430815  T
Q  136 a 136  Q
    |    
T  31430816 a 31430816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 17896555 - 17896476
Alignment:
Q  58 aaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  17896555 aaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagtat 17896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 36922407 - 36922493
Alignment:
Q  47 cttattgcatcaaaa-gtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||    
T  36922407 cttattgcatcaaaaagtaatatcaattgttgattgtcttgatttatttaaaatgtcaaaatgtgacaattaaaaaggaacggaggt 36922493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 10227413 - 10227514
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||||||||  |  |||| |||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||||||    
T  10227413 taaaagtataacttattgcatcaaaagtagaaataattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagt 10227512  T
Q  136 at 137  Q
    ||    
T  10227513 at 10227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 8265118 - 8265206
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||| | ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | ||||||||||||||    
T  8265118 ttattgcatcaaaaggagtatcaattgttgattgtcttggtttgtgtaaaatttcaaaatgtgacaattaaaaaagaacggaggtagta 8265206  T

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Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 29722391 - 29722291
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||  |||||| | ||||||||||||||| | |||||| ||||||||    
T  29722391 taaaagtataacttattgcatcaaaagtagtatcgattgttgattgtcttggtttgcgtaaaatgttaaaatgtgacaattataaaggaacagaggtagt 29722292  T
Q  136 a 136  Q
    |    
T  29722291 a 29722291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 3838019 - 3838113
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||  |||||| |||||| |||||||||||| ||||| ||||    
T  3838019 taaaagtataacttatggcatcaaaagtaataacaattattgattgtcttgatttgcgtaaaatgtcaaaaagtgacaattaaaaaggaatggag 3838113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 36298260 - 36298177
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||| ||||||||||||||||||||||| || ||||| |||||||| ||||||||| |||||| |||||||||||||||||||    
T  36298260 taaaaatataacttattgcatcaaaagtagtaacaattattgattgttttgatttgtgtaaaatgtcaaaatgtgacaattaaa 36298177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 18470464 - 18470554
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||  |||||||| |||||| |||||||||| ||||||    
T  18470464 taaaagtatagcttattgcataaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatattaaaatgcgacaattaaaaaggaac 18470554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 5732159 - 5732058
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  5732159 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 5732060  T
Q  136 at 137  Q
    ||    
T  5732059 at 5732058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 26724081 - 26724177
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatc-aaaatgtgacaattaaagaggaacggagg 131  Q
    ||||||||||||||||||||||||||||| ||  |||  |||||||||||| ||||| |||||| || ||||||||||||||||| |||||||||||    
T  26724081 taaaagtataacttattgcatcaaaagtagtaataatcattgattgtcttggtttgtgtaaaatgtcaaaaatgtgacaattaaaaaggaacggagg 26724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 29497620 - 29497526
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||| ||||| |||| ||||||| |||||||||||||||||| || ||||| |||||| ||||||||||| ||||||| || |||||||    
T  29497620 taaaagtatagcttatggcataaaaagtagtatcaattgttgattgtcctggtttgtgtaaaatgtcaaaatgtgataattaaaaagaaacggag 29497526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 38168875 - 38168773
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaa-ttgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||||||||||||||||||| || || ||| ||  ||||||||||| ||||| |||||||| |||| |||||||||||| || |||||||||||    
T  38168875 taaaagtataacttattgcatcaaaaatagtaacaaattaatgattgtcttggtttgtgtaaaatattaaaaagtgacaattaaaaagaaacggaggtag 38168776  T
Q  135 tat 137  Q
    |||    
T  38168775 tat 38168773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 47408270 - 47408372
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| |||||||||| || || || |||| ||||||| ||||| |||||| |||||| |||||||||||| |||||||||||||||    
T  47408270 taaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagt 47408369  T
Q  136 att 138  Q
    |||    
T  47408370 att 47408372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 41675272 - 41675173
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| ||||||||||||||| ||  ||||||| |||||||||||| ||| | |||||| ||||||||||||||||||| |||||| ||||||||    
T  41675272 taaaactatagcttattgcatcaaaaatag-atcaattattgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagt 41675174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 42841938 - 42841852
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||| ||||||    
T  42841938 attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggatgtagta 42841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 33173963 - 33174064
Alignment:
Q  35 ttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||| ||||||||| |||||||||| || ||||  |||| | | ||| ||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  33173963 ttaaaagtacaacttattgtatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtag 33174062  T
Q  135 ta 136  Q
    ||    
T  33174063 ta 33174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 28608763 - 28608851
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||||||  | || || |||||||||||||||||| |||||||||||||| ||||||||||| |||||| || ||||||    
T  28608763 ttattgtatcaaaagtagcaacatttattgattgtcttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacagatgtagta 28608851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 140
Target Start/End: Complemental strand, 44820676 - 44820589
Alignment:
Q  53 gcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttg 140  Q
    |||||||||||| ||  |||| |||||||||||| |||||||||||| ||||||| ||||| ||||| | ||||||||||| ||||||    
T  44820676 gcatcaaaagtagtaataattattgattgtcttggtttgtataaaatgtcaaaatatgacagttaaaaatgaacggaggtaatatttg 44820589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 20035205 - 20035259
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgattt 90  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  20035205 taaaagtatagcttattgcattaaaaggaatatcaattgttgattgtcttgattt 20035259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 20045616 - 20045670
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgattt 90  Q
    |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  20045616 taaaagtatagcttattgcattaaaaggaatatcaattgttgattgtcttgattt 20045670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 33921860 - 33921758
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||| ||||||||||||||||| || ||||  |||| | ||||  ||| | |||||| | ||||||||||||||||| |||||||||||||||    
T  33921860 taaaaatataatttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagt 33921761  T
Q  136 att 138  Q
    |||    
T  33921760 att 33921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 3310377 - 3310469
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgtta 143  Q
    ||||||||||||||||||  | || |||||||||||| ||||  |||||| ||||||| ||||| ||||| |||||||||||||||| ||||||    
T  3310377 attgcatcaaaagtaataata-ttattgattgtcttggtttgcgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagtacttgtta 3310469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 33258038 - 33258138
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| |  ||||| |||||||||| ||  | || |||||||| ||||||||| |||||| ||||||  ||||||||||| |||||||||||||||    
T  33258038 taaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagt 33258137  T
Q  136 a 136  Q
    |    
T  33258138 a 33258138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 44480228 - 44480156
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatg 108  Q
    ||||| |||| |||||||||| |||| || ||||||||||||||||||||| ||||| |||||| ||||||||    
T  44480228 taaaaatatagcttattgcataaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatg 44480156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 18194286 - 18194191
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgttaag 145  Q
    |||| |||||||||| ||||| || |||||||||||| ||||| |||||| | ||||  ||||||||||| ||||||||| |||||| ||| ||||    
T  18194286 attgtatcaaaagtagtatcatttattgattgtcttggtttgtgtaaaatttgaaaaactgacaattaaaaaggaacggatgtagtaattgataag 18194191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 138
Target Start/End: Original strand, 47459834 - 47459897
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| ||||||||||||| |||||||||||||  | ||||||||| ||||||||||||||||||    
T  47459834 ttgaatgtcttgatttgtgtaaaatatcaaaaaataacaattaaaaaggaacggaggtagtatt 47459897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 6799580 - 6799678
Alignment:
Q  40 agtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||||| |||| ||||||||| || || ||||   ||| ||||||| ||| | |||||| |||| |||||||||||||| ||||||||||||||||||    
T  6799580 agtataatttatcgcatcaaaaatagtaacaatcactgactgtcttggtttatgtaaaatgtcaacatgtgacaattaaaaaggaacggaggtagtatt 6799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 7477284 - 7477191
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||||||||||||||||| || ||||  |||| | ||||  ||| | |||||| ||||||||| ||||||||| || ||||||    
T  7477284 taaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaaatgtaacaattaaaaagaaacgga 7477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 36648091 - 36648011
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaatta 117  Q
    |||||| ||||||||||||||||||||||| |  |||| |||||||||||| ||||| |||||| | |||| ||||||||||    
T  36648091 taaaagcataacttattgcatcaaaagtaaaaataattattgattgtcttggtttgtgtaaaatgttaaaa-gtgacaatta 36648011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 42881118 - 42881176
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaa 106  Q
    ||||||||||||||||| ||  |||| || ||||||||| |||||||||||||||||||    
T  42881118 ttattgcatcaaaagtagtaaaaattattaattgtcttggtttgtataaaatatcaaaa 42881176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 31399018 - 31398925
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||  |||||  |||||||||| |||||||| || ||||||||| ||| | ||||||   ||||||||||||||||| || ||||||    
T  31399018 taaaagtatagtttattatatcaaaagtagtatcaatttttaattgtcttggtttatgtaaaatgctaaaatgtgacaattaaaaagcaacgga 31398925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 31815154 - 31815058
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||| || | |||| |||||||||| || || || |||||| ||||||||||| |||||| | ||||  ||||||||||| |||||||||||||    
T  31815154 taaaagtaaaaataattgtatcaaaagtagtaaca-ttattgattatcttgatttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggaggta 31815058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17896609 - 17896569
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgtt 76  Q
    ||||| |||| ||||||||||||||||||||||||||||||    
T  17896609 taaaaatatagcttattgcatcaaaagtaatatcaattgtt 17896569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 46715355 - 46715308
Alignment:
Q  79 ttgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  46715355 ttgtcttgatttgtgtaaaaagtcaaaatgtgacaattaaaaaggaac 46715308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 41889041 - 41888979
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||||||| ||||| |||||| ||| || |||| ||||||| |||||||||| ||||||    
T  41889041 ttgattgtcttggtttgtgtaaaatgtcacaaagtgataattaaaaaggaacggagatagtat 41888979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 8380639 - 8380578
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| |||||||||||||   |||| ||||| ||||||||||||||||    
T  8380639 ttgagtgtcttggtttgtgtaaaatatcaaaaatggacagttaaaaaggaacggaggtagta 8380578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 9601935 - 9601886
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||| ||||| |||||  ||||||||||||||||||| |||||||||    
T  9601935 tgtcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9601886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 9829506 - 9829457
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||| ||||| |||||  ||||||||||||||||||| |||||||||    
T  9829506 tgtcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacgga 9829457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 30866783 - 30866722
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| |||||| ||||||  ||||| ||||| ||||||||||||||||    
T  30866783 ttgagtgtcttggtttgtgtaaaatgtcaaaaaatgacagttaaaaaggaacggaggtagta 30866722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 34368700 - 34368656
Alignment:
Q  82 tcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    |||| |||||| ||||||||||||| |||||||||||| ||||||    
T  34368700 tcttaatttgtgtaaaatatcaaaaagtgacaattaaaaaggaac 34368656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 41408864 - 41408772
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgtt 142  Q
    |||| ||||||| ||||| || || || ||||||||||||||| ||||||   |||| |||||||||||| | ||| |||| ||||| |||||    
T  41408864 attgtatcaaaattaataacatttattaattgtcttgatttgtgtaaaatgataaaaagtgacaattaaaaatgaatggagatagtacttgtt 41408772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 9e-39; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 39073183 - 39073284
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  39073183 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 39073282  T
Q  136 at 137  Q
    ||    
T  39073283 at 39073284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 2674058 - 2673958
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  2674058 taaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 2673959  T
Q  136 a 136  Q
    |    
T  2673958 a 2673958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 12869979 - 12869882
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||||||||    
T  12869979 taaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttggtttgtataaaatatcaaaatgtgacaattaaaaatgaacggaggta 12869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 8825196 - 8825296
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||||||||||    
T  8825196 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagt 8825295  T
Q  136 a 136  Q
    |    
T  8825296 a 8825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 38910412 - 38910512
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  38910412 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 38910511  T
Q  136 a 136  Q
    |    
T  38910512 a 38910512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 4175560 - 4175459
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  4175560 taaaagtatagcttattgtatcaaaagtagtatcaattgtttattgtcttgctttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 4175461  T
Q  136 at 137  Q
    ||    
T  4175460 at 4175459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 42911689 - 42911789
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  42911689 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaac-gaggtagt 42911787  T
Q  136 at 137  Q
    ||    
T  42911788 at 42911789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 6072591 - 6072691
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| |  |||||||| ||||||| |||||||||||||||    
T  6072591 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtttaaatgtgataattaaaaaggaacggaggtagt 6072690  T
Q  136 a 136  Q
    |    
T  6072691 a 6072691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 25344099 - 25344199
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||    
T  25344099 taaaaatatagcttattgcatcaaaagtaggatcaattgttgattgtcttgatttgtgtaaaatgacaaaatgtgacaattaaaaaggaacggaggtagt 25344198  T
Q  136 a 136  Q
    |    
T  25344199 a 25344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 38017357 - 38017254
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||| |||||| | ||||||||||||||||| | ||||| |||||||    
T  38017357 taaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttcgtttgtgtaaaatgttaaaatgtgacaattaaaaaagaacgaaggtagt 38017258  T
Q  136 attt 139  Q
    ||||    
T  38017257 attt 38017254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 18794922 - 18795024
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||| |||||||||||  |||||||||||||||||||||||||| |||||| ||||| ||||| ||||||| |||||||||||||||    
T  18794922 taaaagtatagcttattacatcaaaagtatgatcaattgttgattgtcttgatttgtgtaaaatgtcaaagtgtgaaaattaaaaaggaacggaggtagt 18795021  T
Q  136 att 138  Q
    |||    
T  18795022 att 18795024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 40198927 - 40199029
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| ||||||||||||| || ||||||||| | |||||||| ||||    
T  40198927 taaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatctgtgtaaaatatcaaaaagtaacaattaaaaaagaacggagatagt 40199026  T
Q  136 att 138  Q
    |||    
T  40199027 att 40199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 4098470 - 4098570
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||| ||||||||||||| ||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||| || ||||||| ||||    
T  4098470 taaaggtataacttattgtatcaaaagtaatatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggagatagt 4098569  T
Q  136 a 136  Q
    |    
T  4098570 a 4098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 6754259 - 6754159
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||| |||||    
T  6754259 taaaagtatagcttattgcatcaaaagtatgatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaagtagt 6754160  T
Q  136 a 136  Q
    |    
T  6754159 a 6754159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 9076210 - 9076310
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||| | ||||||||||| ||||||| |||||||    
T  9076210 taaaagtataatttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattatgacaattaaaaaggaacgaaggtagt 9076309  T
Q  136 a 136  Q
    |    
T  9076310 a 9076310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 7579748 - 7579645
Alignment:
Q  36 taaaagtataacttattgcatcaaaa-gtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||||  |||||||| ||||| ||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  7579748 taaaagtatagtttattgcaacaaaaagtagtatcaattgttgattgttttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtag 7579649  T
Q  135 tatt 138  Q
    ||||    
T  7579648 tatt 7579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 22582614 - 22582712
Alignment:
Q  39 aagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||||||  ||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||  |||||| ||||||||||||||||||    
T  22582614 aagtatagtttattgcatcaaaagtagtataaattgttgattgtcttgatttgtataaaatgtcaaaatgtga-tattaaaaaggaacggaggtagtatt 22582712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 7403991 - 7404084
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||| |||||||||||||| || ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||| |||||||||    
T  7403991 taaaagtataatttattgcatcaaaaatagtatcaattgttgattatcttggtttatgtaaaatatcaaaatgtgacaattaaaaaggaacgga 7404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 10359315 - 10359222
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||| || ||||||    
T  10359315 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacgga 10359222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 18020848 - 18020755
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||| |||||||||| ||||||| ||||||||||||||||||||| | ||| |||||| ||||||||||||||||||| |||||||||    
T  18020848 taaaagtatagcttattgcattaaaagtagtatcaattgttgattgtcttggtctgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgga 18020755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 26854175 - 26854074
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| |||||||| |||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||| | |||||    
T  26854175 taaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgaatgtagt 26854076  T
Q  136 at 137  Q
    ||    
T  26854075 at 26854074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 34261451 - 34261552
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| ||||||| |||||||||| ||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| |||||| ||||||||    
T  34261451 taaaaatatagcttattgtatcaaaagtagtatcaattgttgattgtcttggtttgtctaaaatgtcaaaatatgacaattaaaaaggaacagaggtagt 34261550  T
Q  136 at 137  Q
    ||    
T  34261551 at 34261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 38363328 - 38363429
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||| ||||||| |||||||    
T  38363328 taaaagtatagtttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaattgtgacaattaaaaaggaacgaaggtagt 38363427  T
Q  136 at 137  Q
    ||    
T  38363428 at 38363429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 38702280 - 38702381
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| | |||||||| ||||| ||||||||||| ||||||| || ||||    
T  38702280 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatattaaaatatgacaattaaaaaggaacgaagatagt 38702379  T
Q  136 at 137  Q
    ||    
T  38702380 at 38702381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 1088001 - 1087913
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||| |||||| | ||||||||||||||||| || |||||||||||||    
T  1088001 ttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 1087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 4017553 - 4017661
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||| ||||||||||||||||||||||| | ||||| |||||| ||||||||||| |||||| |||||| |||||||||||| ||||| ||| |||||    
T  4017553 taaaagaataacttattgcatcaaaagtaaaaacaattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaatggatgtagt 4017652  T
Q  136 atttgttaa 144  Q
    |||| ||||    
T  4017653 attttttaa 4017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 4985255 - 4985155
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||||||||||||||||||||| || ||| | |||||||||||| | ||| |||||| ||||||||||||||||||| |||||||||||||||    
T  4985255 taaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttggtatgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 4985156  T
Q  136 a 136  Q
    |    
T  4985155 a 4985155  T

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Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 135
Target Start/End: Complemental strand, 28024339 - 28024240
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||  |||| |||||||||||| || || |||||| ||||||| ||||||||||| |||||||||||||||    
T  28024339 taaaagtataacttattgcatcaaaagtagtaataattattgattgtcttggttggtgtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagt 28024240  T

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Target: chr5; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 12664997 - 12665094
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||| | | |||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||| ||||||||||| |||||||||||||    
T  12664997 taaaagtacatcatattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaaggaacggaggta 12665094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 8229883 - 8229784
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||| ||| || |||||| |||||||||||| ||||||| |||||||    
T  8229883 taaaagtataacttattgcatcaaaagtattaacaattattgattgtcttaatttgtgtaagatgtcaaaa-gtgacaattaaaaaggaacgaaggtagt 8229785  T

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Target: chr5; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 36239597 - 36239697
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||||||||||||||||||||| || ||| | |||||||||||||| ||| |||||| ||||||||||||||||||| | |||||||| ||||    
T  36239597 taaaaatataacttattgcatcaaaagtagtaacaactattgattgtcttgatatgtgtaaaatgtcaaaatgtgacaattaaaaatgaacggagatagt 36239696  T
Q  136 a 136  Q
    |    
T  36239697 a 36239697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 24074918 - 24074835
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||| |||||| |||||||||||||||||||    
T  24074918 taaaagtataacttattgcatcaaaagtagtaacaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaa 24074835  T

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Target: chr5; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 5119317 - 5119411
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||||||||||||||||||||||  | ||||| |||||||| || ||||||||||||||| ||||  ||||||||||| ||||||||||    
T  5119317 taaaagtataacttattgcatcaaaagtagaaacaattattgattgtattaatttgtataaaatattaaaaaatgacaattaaaaaggaacggag 5119411  T

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Target: chr5; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 4427486 - 4427385
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaata-tcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||||||||||| ||||||||||  | | ||||  |||||||||||||| || ||||||||||||| |||||||||||| ||||||||||||||    
T  4427486 taaaagtataacttattgtatcaaaagtagcaataaattactgattgtcttgattcgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtag 4427387  T
Q  135 ta 136  Q
    ||    
T  4427386 ta 4427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 18465836 - 18465933
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||| ||| ||| |  ||||||||||||| ||| ||||||| ||||| |||||||    
T  18465836 taaaagtataacttattacatcaaaagtagtatcaattgttgattgttttggtttctgaaaaatatcaaaatatgataattaaaaaggaatggaggta 18465933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 14793870 - 14793770
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||||| || ||  |||| |||||| | ||| ||||| |||||| ||||||||||||||||||| ||||| |||||||||    
T  14793870 taaaagtataacttattgcatcaaaaatagtaataattattgattatattggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaagggaggtagt 14793771  T
Q  136 a 136  Q
    |    
T  14793770 a 14793770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 31546079 - 31546000
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaat 115  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |||||| |||||| ||||||||    
T  31546079 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaaggtgacaat 31546000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 28447065 - 28446963
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| ||||||| || || ||||| |||||| ||||| ||||| |||||| |||||| |||||||||||| || ||||||| ||||    
T  28447065 taaaagtataacttattgtatcaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaacggagatagt 28446966  T
Q  136 att 138  Q
    |||    
T  28446965 att 28446963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 1297818 - 1297717
Alignment:
Q  36 taaaagtataacttattgcatcaaaag-taatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||| |||||||||||||||  || ||| ||||||||||||||||  ||| |||||||| ||||||||| ||||||||| ||||| ||||||||    
T  1297818 taaaagtatagcttattgcatcaaaaaatagtattaattgttgattgtcttagtttatataaaatgtcaaaatgtaacaattaaaaaggaatggaggtag 1297719  T
Q  135 ta 136  Q
    ||    
T  1297718 ta 1297717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 9127431 - 9127330
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| ||||||||||||||||||| ||| ||||  |||| | | ||| ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  9127431 taaaagtacaacttattgcatcaaaagtgataacaatcattgactattttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 9127332  T
Q  136 at 137  Q
    ||    
T  9127331 at 9127330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 16124340 - 16124231
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| || |||||||||||||||||||| || ||||  |||| | | ||| ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  16124340 taaaaatacaacttattgcatcaaaagtagtaacaatcattgactatattggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 16124241  T
Q  136 atttgttaag 145  Q
    ||||| ||||    
T  16124240 atttgataag 16124231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 144
Target Start/End: Original strand, 31803463 - 31803571
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| || | |||| |||||||||| || || || || ||||||||||||||| |||||| |||||| |||||||||||| | |||||||||||||    
T  31803463 taaaagtaaaaataattgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaggtagt 31803562  T
Q  136 atttgttaa 144  Q
    |||| ||||    
T  31803563 attttttaa 31803571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 6008021 - 6008124
Alignment:
Q  34 gttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatc-aaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||||| ||||| | |||| |||||||||| || ||||| |||||||| ||| ||||| ||||||||| |||| |||||||||||| ||||||||||||    
T  6008021 gttaaaaatataaatcattgtatcaaaagtagtaacaattattgattgtattggtttgtgtaaaatatcaaaaaagtgacaattaaaaaggaacggaggt 6008120  T
Q  133 agta 136  Q
    ||||    
T  6008121 agta 6008124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 18437403 - 18437301
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||  ||||| ||||||| |  || || || |||||||| ||| ||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  18437403 taaaagtataaagtattgtatcaaaaatggtaacatttattgattgtattggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagt 18437304  T
Q  136 att 138  Q
    |||    
T  18437303 att 18437301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 37809912 - 37809998
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||| || || || || ||||||||| ||||| ||||||||||||| |||||||||||| |||| |||||||||||    
T  37809912 attgcatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggatcggaggtagta 37809998  T

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Target: chr5; HSP #46
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 38297597 - 38297511
Alignment:
Q  44 taacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||||||||||||||||  | ||||| |||||||||||| ||||| |||||| | |||| |||||||||||| ||||||||||    
T  38297597 taacttattgcatcaaaagtagaaacaattattgattgtcttgttttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggag 38297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 13703275 - 13703336
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||    
T  13703275 ttgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacggagatagta 13703336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 7834137 - 7834062
Alignment:
Q  44 taacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||||||||| |  |||| |||||| | ||||||||| ||||||||||||| ||||||||||||    
T  7834137 taacttattgcatcaaaagtaaaaataattattgattattttgatttgtgtaaaatatcaaaaggtgacaattaaa 7834062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 10889237 - 10889168
Alignment:
Q  67 atcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||||||| ||| | |||||| | ||||||||||||||||| || |||||||||||||    
T  10889237 atcaattgttgattgtcttggtttatgtaaaatgttaaaatgtgacaattaaaaagaaacggaggtagta 10889168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 2133986 - 2133890
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||||||||||||||||||| || || ||||| |||||||||||| ||| | |||||| ||||||  ||| ||||||| ||| ||||||||||    
T  2133986 taaaagtataacttattgcatcaaaa-tagtaacaattattgattgtcttggtttatgtaaaatgtcaaaa-atgataattaaaaaggcacggaggtag 2133890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 12784509 - 12784423
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||| ||||| |||||| |||||| |||| ||||||| |||||| |||||||||    
T  12784509 attgtatcaaaagtagtaacatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaacagaggtagta 12784423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 37633829 - 37633915
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || || ||||||||| ||||| ||||||||||||| |||||||||||| |||| |||| ||||||    
T  37633829 attgtatcaaaagtagtaacatttattaattgtcttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggatcggacgtagta 37633915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 7734834 - 7734755
Alignment:
Q  66 tatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgttaag 145  Q
    ||||| || |||||||||||||||| | |||||| | ||||  ||||||||||| ||||||||| ||||||||| |||||    
T  7734834 tatcatttattgattgtcttgatttatgtaaaatttgaaaaaatgacaattaaaaaggaacggatgtagtatttattaag 7734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 12723025 - 12722939
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| ||  | || |||||||||||| ||||| |||||| |||||| |||| ||||||| |||||| |||||||||    
T  12723025 attgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatgtcaaaaagtgagaattaaaaaggaacagaggtagta 12722939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 26906630 - 26906724
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggagg 131  Q
    ||||| |||| |||||| |||||||||| ||  | || |||| ||| ||| ||||| ||||||||||||| |||||||||||| |||||| ||||    
T  26906630 aaaaggataaattattgtatcaaaagtagtaagatttattgaatgttttggtttgtgtaaaatatcaaaaagtgacaattaaaaaggaacagagg 26906724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 31803118 - 31803172
Alignment:
Q  78 attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||||||| | ||| ||||||||||||| |||||||||||| ||||||||||||    
T  31803118 attgtcttggtatgtgtaaaatatcaaaaggtgacaattaaaaaggaacggaggt 31803172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 7408470 - 7408567
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||| |||||| |||||||||| ||    || |||||||| ||| ||||| |||||| ||||||  ||||||||||| ||||||| |||||    
T  7408470 taaaagtataaattattgtatcaaaagtattaatgtttattgattgttttggtttgtgtaaaatgtcaaaagatgacaattaaaaaggaacgaaggta 7408567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 4694903 - 4694959
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgt 92  Q
    ||||||||||||||||| ||||||||||| || ||||| |||||| ||||| |||||    
T  4694903 taaaagtataacttattacatcaaaagtattagcaattattgattatcttggtttgt 4694959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 4962266 - 4962194
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatg 108  Q
    |||||||||||||||||||||||||||| ||| |  || |||||| ||||| ||| | |||||| ||||||||    
T  4962266 taaaagtataacttattgcatcaaaagtgataacggttattgattatcttggtttatgtaaaatgtcaaaatg 4962194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 25027655 - 25027555
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| | |||||| |||||||||| || || || |||||||||||  ||| | |||||| ||| || |||||||||||| || |||||| |||||    
T  25027655 taaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttagtttatgtaaaatgtcacaaagtgacaattaaaaagaaacggatgtagt 25027556  T
Q  136 a 136  Q
    |    
T  25027555 a 25027555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 38502884 - 38502784
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||| ||||||||||| || ||||  |||| | | ||| ||||| |||||| | ||||||| ||||||||| || ||| ||||||||    
T  38502884 taaaagtacaacttattacatcaaaagtagtaacaatcattgactattttggtttgtgtaaaatgttaaaatgtaacaattaaaaagaaacagaggtagt 38502785  T
Q  136 a 136  Q
    |    
T  38502784 a 38502784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 5843059 - 5842980
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||| |||||||||| || || || |||||||||||| ||| | |||||| |||||| |||| ||||||| |||||||||    
T  5843059 attgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcaaaaagtgataattaaaaaggaacgga 5842980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 18000513 - 18000571
Alignment:
Q  78 attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||| ||| ||||| |||||| |||||| || ||||||||| ||||||||||||||||    
T  18000513 attgttttggtttgtgtaaaatgtcaaaaggtaacaattaaaaaggaacggaggtagta 18000571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 23418686 - 23418748
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaat 99  Q
    ||||| |||| |||||| |||||| |||||| || || |||||||||||||||||| ||||||    
T  23418686 aaaaggataaattattgtatcaaaggtaataacatttattgattgtcttgatttgtgtaaaat 23418748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 39893875 - 39893789
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||| | ||| ||||| |||||| | |||| |||||||||||| ||||||||| ||||||    
T  39893875 attgtatcaaaagtagtaacacttattgattattttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggatgtagta 39893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 425302 - 425362
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||||||||| |||||| ||||||  ||||| ||||| ||||||||||||||||    
T  425302 ttgagtgtcttgatttgtgtaaaatgtcaaaa-atgacagttaaaaaggaacggaggtagta 425362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 9958963 - 9958862
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||| ||| |||||| |||||||||| |  || || |||| ||| ||||||||| |||| | ||||||  ||||||||||| | ||||| |||||||    
T  9958963 taaaagtgtaaattattgtatcaaaagtagtgacatttattgaatgtattgatttgtgtaaattgtcaaaaaatgacaattaaaaatgaacgaaggtagt 9958864  T
Q  136 at 137  Q
    ||    
T  9958863 at 9958862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 38308167 - 38308106
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| |||||| |||||| |||||  ||||| ||||||||||||||||    
T  38308167 ttgagtgtcttggtttgtgtaaaatgtcaaaaagtgaccgttaaaaaggaacggaggtagta 38308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 4688862 - 4688818
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||| |  ||||| |||||||||||||||||||    
T  4688862 ttgattgtcttgatttatggaaaatgtcaaaatgtgacaattaaa 4688818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 82)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 8735549 - 8735649
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  8735549 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 8735648  T
Q  136 a 136  Q
    |    
T  8735649 a 8735649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 53599870 - 53599770
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||| |||||||||||||||    
T  53599870 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagt 53599771  T
Q  136 a 136  Q
    |    
T  53599770 a 53599770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 39671485 - 39671585
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| ||||||||||||||| |||||||||||||||    
T  39671485 taaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcataatgtgacaattaaataggaacggaggtagt 39671584  T
Q  136 a 136  Q
    |    
T  39671585 a 39671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 44217866 - 44217966
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  44217866 taaaagtatatcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 44217965  T
Q  136 a 136  Q
    |    
T  44217966 a 44217966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 12252252 - 12252354
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||||| ||||| ||||| |||||||||||||||    
T  12252252 taaaagtataacttattgcatcaaaagtattatcaattgttgattgtcttgatttatgtaaaatgtcaaaatatgacagttaaaaaggaacggaggtagt 12252351  T
Q  136 att 138  Q
    |||    
T  12252352 att 12252354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 141
Target Start/End: Complemental strand, 22828485 - 22828380
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| ||| |||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  22828485 taaaagtataacttattgcatcaaaagtagtagcaattattggttgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 22828386  T
Q  136 atttgt 141  Q
    ||||||    
T  22828385 atttgt 22828380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 44069191 - 44069291
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  44069191 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggaggtagt 44069290  T
Q  136 a 136  Q
    |    
T  44069291 a 44069291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 34464436 - 34464531
Alignment:
Q  35 ttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||| ||||||||||    
T  34464436 ttaaaagtatagcttattgcatcaaaagtaatatcaattattgattgttttaatttgtataaaatatcaaaatgtaacaattaaaaaggaacggag 34464531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 134
Target Start/End: Complemental strand, 5374434 - 5374336
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||||||||||    
T  5374434 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtataaaatgtcaaaatatgacaattaaaaagaaacggaggtag 5374336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 35231850 - 35231947
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||||||    
T  35231850 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 35231947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 44013997 - 44013897
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || | ||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  44013997 taaaagtatagcttattgcatcaaaaatagtttcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 44013898  T
Q  136 a 136  Q
    |    
T  44013897 a 44013897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 52061718 - 52061818
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||  |||||||||||||||||| |||||| ||||||| ||||||||||| |||||||||||||||    
T  52061718 taaaagtataacttattgcatcaaaagtagtaacaatgattgattgtcttgatttgtgtaaaatgtcaaaatatgacaattaaaaaggaacggaggtagt 52061817  T
Q  136 a 136  Q
    |    
T  52061818 a 52061818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 16464866 - 16464763
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||| | ||||| |||||| |||||||||||||| |||| |||||||||||||||    
T  16464866 taaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtctaggtttgtgtaaaatgtcaaaatgtgacaactaaaaaggaacggaggtagt 16464767  T
Q  136 attt 139  Q
    ||||    
T  16464766 attt 16464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 38617391 - 38617291
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||  || ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  38617391 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattgt--tggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 38617294  T
Q  136 att 138  Q
    |||    
T  38617293 att 38617291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 46872081 - 46872183
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||| || |||||| ||||||||    
T  46872081 taaaagaataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatttaaaaggaac-gaggtagt 46872179  T
Q  136 attt 139  Q
    ||||    
T  46872180 attt 46872183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 13629277 - 13629175
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| |||| || ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| ||||||||    
T  13629277 taaaagtatagcttattgcatgaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagt 13629178  T
Q  136 att 138  Q
    |||    
T  13629177 att 13629175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 42513110 - 42513008
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatc-aaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||| |||||| || ||||||||||||||||| | ||||||||||||    
T  42513110 taaaagtatagcttattgcatcaaaagtagtattaattgttgattgtcttgatttgtgtaaaatttcaaaaatgtgacaattaaaaatgaacggaggtag 42513011  T
Q  135 tat 137  Q
    |||    
T  42513010 tat 42513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 54231699 - 54231797
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| |||||| ||||||  ||||||||||| ||||||||||||||    
T  54231699 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtag 54231797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 56576188 - 56576087
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||| ||||| ||||| |||||  ||||||||||||||||||| |||||||||||||||    
T  56576188 taaaagtatagcttattgcatcaaaggtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaacggaggtagt 56576089  T
Q  136 at 137  Q
    ||    
T  56576088 at 56576087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 16664401 - 16664481
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaatt 116  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  16664401 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaatt 16664481  T

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Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 22678393 - 22678293
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||| ||||| ||| |||||||| ||||||||||||||||||| | |||||||||||||    
T  22678393 taaaagtatagcttattgcatcaatagtagtatcaattgttgattatcttggtttatataaaatgtcaaaatgtgacaattaaaaatgaacggaggtagt 22678294  T
Q  136 a 136  Q
    |    
T  22678293 a 22678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 35232382 - 35232282
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | ||||||| |||||    
T  35232382 taaaagtatatcttattgcatcaaaagcagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggatgtagt 35232283  T
Q  136 a 136  Q
    |    
T  35232282 a 35232282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 39683798 - 39683698
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| | ||||||||| ||||||| |||||||||||||||    
T  39683798 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtgaaaatgtgataattaaaaaggaacggaggtagt 39683699  T
Q  136 a 136  Q
    |    
T  39683698 a 39683698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 26906473 - 26906380
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||| | |||||||    
T  26906473 taaaagtataacttattgcataaaaagtaatatcaattgttgattgttttagtttgtgtaaaatatcaaaatatgacaattaaaaatgaacgga 26906380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 21044831 - 21044732
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||||||| || |||| |||||||||||||||    
T  21044831 taaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataa-taaaaaggaacggaggtagt 21044733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 26620435 - 26620335
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||| ||| |||||  ||||| ||||||||||||||||||| |||||||||| ||||    
T  26620435 taaaagtatagcttattgcatcaaaagtagtatcaattgttgtttgttttggtttgtgcaaaatgtcaaaatgtgacaattaaaaaggaacggagttagt 26620336  T
Q  136 a 136  Q
    |    
T  26620335 a 26620335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 119
Target Start/End: Original strand, 29295513 - 29295597
Alignment:
Q  35 ttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||| |||||||||||||||||| |||||||    
T  29295513 ttaaaagtataacttattgcatcgaaagtagtatcaattattgattgtcttggtttgtgtaaaatatcaaaatgtgataattaaa 29295597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 9834463 - 9834540
Alignment:
Q  59 aaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  9834463 aaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 9834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 48782359 - 48782452
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||  |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| | |||||||    
T  48782359 taaaagtattgcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaatgaacgga 48782452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 6195184 - 6195284
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| | |||||||||| |||||  ||||| |||||| |||||||||||| |||||| ||||||||    
T  6195184 taaaagtataacttattgcatcaaaagtagtagcaattatggattgtcttggtttgtgaaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagt 6195283  T
Q  136 a 136  Q
    |    
T  6195284 a 6195284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 33755115 - 33755015
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| ||||| | ||||||||||||||||||||  ||| | |||||| | ||||||||||||||||| |||||||||||||||    
T  33755115 taaaagtatagcttattgcattaaaaggagtatcaattgttgattgtcttagtttatgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagt 33755016  T
Q  136 a 136  Q
    |    
T  33755015 a 33755015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 140
Target Start/End: Original strand, 55703080 - 55703184
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||||||||||||||||||||||||| ||||| |||||||||||| | | | |||||| ||||||| ||||||||||| |||||||||| ||||    
T  55703080 taaaaatataacttattgcatcaaaagtaataacaattattgattgtcttggtatatgtaaaatgtcaaaatatgacaattaaaaaggaacggagatagt 55703179  T
Q  136 atttg 140  Q
     ||||    
T  55703180 gtttg 55703184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 36408883 - 36408966
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||| |||||||||||||||||| |||||| |||| ||||||||| ||||| |||||| |||||||||||||||||||    
T  36408883 taaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaa 36408966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 36423049 - 36423132
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||| |||||||||||||||||| |||||| |||| ||||||||| ||||| |||||| |||||||||||||||||||    
T  36423049 taaaagtatagcttattgcatcaaaagtagtatcaaatgtttattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaa 36423132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 36659511 - 36659409
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||| |||||||||||||| |||| ||| | ||||| |||||||||||||||||| |||||| ||||||  ||||||||||  |||||||||||||||    
T  36659511 taaaagcataacttattgcattaaaaataaaaacaattattgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaagaaggaacggaggtagt 36659412  T
Q  136 att 138  Q
    |||    
T  36659411 att 36659409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 19093237 - 19093136
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||| |||| | ||||| ||| | |||||| ||||||||||||||||||| |||||||||||| ||    
T  19093237 taaaagtacaacttattgcatcaaaagtagtaacaattattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtcgt 19093138  T
Q  136 at 137  Q
    ||    
T  19093137 at 19093136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 19527304 - 19527203
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| ||||||| |||||||||| ||||||||||||||| ||||| ||||| |||||  ||||||||||||||||||| ||||| ||||| |||    
T  19527304 taaaattatagcttattgtatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaacgtcaaaatgtgacaattaaaaaggaaaggagggagt 19527205  T
Q  136 at 137  Q
    ||    
T  19527204 at 19527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 31984236 - 31984136
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||| ||| ||||| |||||| |||||| |||||||||||| || || ||| |||||    
T  31984236 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtgttggtttgtgtaaaatgtcaaaaagtgacaattaaaaagaaatggatgtagt 31984137  T
Q  136 a 136  Q
    |    
T  31984136 a 31984136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 42099868 - 42099968
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |  ||| ||||||||||||||||||| |  |||| |||||||    
T  42099868 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtttaatgtcaaaatgtgacaattaaaaaaaaacgaaggtagt 42099967  T
Q  136 a 136  Q
    |    
T  42099968 a 42099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 3436151 - 3436068
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||  ||||||||||||||||| ||| ||||||||||||||||| ||||| |||||| ||||||||||| |||||||    
T  3436151 taaaagtatagtttattgcatcaaaagtagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaa 3436068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 50623573 - 50623656
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||| ||||||| |||||||||| |||||||| |||||||||||| ||||| |||||| | |||||||||||||||||    
T  50623573 taaaagtatagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaa 50623656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 44549803 - 44549903
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| |||||||||| ||  |||| ||||| || ||||||| ||||||||||||||  |||| ||||||| |||||||||||||||    
T  44549803 taaaagtataacttattgtatcaaaagtagtaataattattgatcgttttgatttatataaaatatcaaacagtgataattaaa-aggaacggaggtagt 44549901  T
Q  136 at 137  Q
    ||    
T  44549902 at 44549903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 354126 - 354226
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| ||||||||||||||||| || || ||||  |||| | ||||| ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  354126 taaaagtacaacttattgcatcaaaaatagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 354225  T
Q  136 a 136  Q
    |    
T  354226 a 354226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 32239556 - 32239661
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtc----ttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggagg 131  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||    |||||||||||||||||||||| | | ||||||||| | ||||  |||    
T  32239556 taaaagtatagcttattgcatcaaaagtagtatcaattgttaattgtcttgattgatttgtataaaatatcaaagtataacaattaaaaatgaacaaagg 32239655  T
Q  132 tagtat 137  Q
    ||||||    
T  32239656 tagtat 32239661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 47885071 - 47884977
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||  |||||||||||||||||||||||  |||| |||||||| ||| || || |||||| |||||||||||||||||||  |||||||||    
T  47885071 taaaagtcaaacttattgcatcaaaagtaataataattattgattgttttggttcgtgtaaaatgtcaaaatgtgacaattaaattggaacggag 47884977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 23237790 - 23237883
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||  |  ||||| |||||| | ||||||| ||||||||| |||||||||    
T  23237790 taaaagtatagcttatcgcatcaaaagtagtatcaattgttgattgttctagtttgtgtaaaatgttaaaatgtaacaattaaaaaggaacgga 23237883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 8741708 - 8741644
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaata 100  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||  || |||||||||||||    
T  8741708 taaaagtatagcttattgcatcaaaagtaatatcaattgttaattgtaatggtttgtataaaata 8741644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 31862070 - 31861967
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| || |||||||||||||| || ||||| |||||| ||||  ||||| |||||| ||||||  | ||||||||| |||||||||| ||||    
T  31862070 taaaagtataattttttgcatcaaaagtagtaacaattattgattatcttagtttgtgtaaaatttcaaaaaataacaattaaaaaggaacggagatagt 31861971  T
Q  136 attt 139  Q
    ||||    
T  31861970 attt 31861967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 37502182 - 37502261
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaat 115  Q
    ||||||||||| |||||| |||||||||| || || || |||||||||||| |||||||||||| |||||| ||||||||    
T  37502182 taaaagtataaattattgtatcaaaagtagtaacatttattgattgtcttggtttgtataaaatgtcaaaaagtgacaat 37502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 42645421 - 42645504
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||||||||||||||||||||||||||||| ||||| |||||| ||||  | | | |||||| ||||||||||| |||||||    
T  42645421 taaaagtataacttattgcatcaaaagtaataacaattattgattatcttagtatatgtaaaatgtcaaaatgtgataattaaa 42645504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 30939329 - 30939419
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttg 140  Q
    |||| |||||||||| || || || ||||  |||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  30939329 attgtatcaaaagtactaccatttattgaccgtcttggtttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggaggtagtatttg 30939419  T

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Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Complemental strand, 38542360 - 38542270
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    ||||||| ||||||||||||||||||||| || ||||| || ||||||||| ||| | |||||| ||||||  ||||||||||| ||||||    
T  38542360 taaaagtctaacttattgcatcaaaagtagtaacaattattaattgtcttggtttatgtaaaatgtcaaaaaatgacaattaaaaaggaac 38542270  T

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Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 47428719 - 47428781
Alignment:
Q  76 tgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||| ||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||    
T  47428719 tgattatcttgatttatgtaaaatatcaaaatgtgacaattaaaaaggaacggatgtagtatt 47428781  T

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Target: chr4; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 52677228 - 52677150
Alignment:
Q  58 aaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||  ||||||| |||||||| ||| ||||| |||||| ||||||||||||||||||| ||||| ||||||||||    
T  52677228 aaaagtagcatcaattattgattgttttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtagta 52677150  T

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Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 53125322 - 53125240
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaa 118  Q
    ||||||||||||||||||||| |||| || || ||||| |||||| ||||| ||||| |||||| ||||||| ||||||||||    
T  53125322 taaaagtataacttattgcataaaaaatagtaacaattattgattatcttggtttgtgtaaaatgtcaaaatatgacaattaa 53125240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 55147145 - 55147043
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatat-caaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||||| ||||||||||||||||||||| ||||| || ||||||||| ||| | |||||| |  ||||  ||||||||||| | ||||||||||||    
T  55147145 taaaagtatagcttattgcatcaaaagtaataacaattattaattgtcttggtttatgtaaaatgtaaaaaaaatgacaattaaaaaagaacggaggtag 55147046  T
Q  135 tat 137  Q
    |||    
T  55147045 tat 55147043  T

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Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 47251573 - 47251674
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||||| | ||| ||| | ||||||   ||||||||||||||||| || ||||||||||||    
T  47251573 taaaagtacaacttattgcatcaaaagtagtaacaatcattgattattttggtttatgtaaaatgataaaatgtgacaattaaaaagaaacggaggtagt 47251672  T
Q  136 at 137  Q
    ||    
T  47251673 at 47251674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 55935306 - 55935367
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  55935306 ttgagtgtcttgatttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 55935367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 33809261 - 33809344
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||| || || || |||||||| ||||||||| |||||| | |||| |||||||||||| |||||| ||||||    
T  33809261 attgcatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatgttaaaaagtgacaattaaaaaggaacagaggta 33809344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 138
Target Start/End: Original strand, 42629480 - 42629579
Alignment:
Q  39 aagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||||||| ||| || | |||||||| || || || |||||||||||| ||||| |||||||||||||  ||||||||||| | ||||||| ||||||||    
T  42629480 aagtataaattactgtaccaaaagtagtaacatttattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaacgaacggatgtagtatt 42629579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 18781639 - 18781721
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaa 118  Q
    |||||||||| |||||||||||||||||||||  |||| |||||| |||| |||||| |||||| || |||  ||||||||||    
T  18781639 taaaagtatatcttattgcatcaaaagtaataataattattgattatcttaatttgtgtaaaatgtcgaaaaatgacaattaa 18781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 38009806 - 38009748
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||||| ||||| |||||  ||||||||||||||||||| ||||||||||||||||||    
T  38009806 tgtcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggaggtagtatt 38009748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 3036557 - 3036646
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||| ||||||||||||| || || ||||||||  |||||| | |||||| | ||||| ||||||||||| ||||||||||||| |||||    
T  3036557 attgtatcaaaagtaataacatttattgattgttatgatttatgtaaaatgtaaaaatatgacaattaaaaaggaacggaggtaatattt 3036646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 33084638 - 33084726
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||||||||||||||||| || ||||| ||||     ||| ||| | |||||| |||||| |||||||||||| |||||||||    
T  33084638 taaaagtataacttattgcatcaaaagtagtaacaattattga-----ttggtttctgtaaaatgtcaaaaagtgacaattaaaaaggaacgga 33084726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 49089105 - 49089166
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||| || |  ||||||||||||| |||||||||||| ||||||||||||||||    
T  49089105 ttgattgtcttggttcgagtaaaatatcaaaaagtgacaattaaaaaggaacggaggtagta 49089166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 9220083 - 9220023
Alignment:
Q  78 attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||||||| ||||| |||||| |||||| |||||||||||| || |||||||||||||||    
T  9220083 attgtcttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagtatt 9220023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 34603828 - 34603884
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||| ||||| |||||||||||||||||||| |||||| |||| ||||    
T  34603828 tgtcttgatttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacagagggagta 34603884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 137
Target Start/End: Complemental strand, 38027601 - 38027558
Alignment:
Q  94 taaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  38027601 taaaatatcaaaaagtgacaattaaaaaggaacggaggtagtat 38027558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 40412103 - 40412206
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||||||||| |||||||| || || ||||| || |||||||| |||| | |||||| ||||||  ||||| ||||| ||||||  |||||||    
T  40412103 taaaaatataacttattacatcaaaaatagtaacaattattaattgtcttaatttatgtaaaatgtcaaaaaatgacagttaaataggaacataggtagt 40412202  T
Q  136 attt 139  Q
    ||||    
T  40412203 attt 40412206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 6091437 - 6091335
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| |||||| || |||| |||||  | || |||| ||||||||||||||| |||| ||||||    ||| ||||| |||||||||||||||    
T  6091437 taaaagtataaattattgtataaaaaataataagatttattgagtgtcttgatttgtatgaaatctcaaaaaacaacacttaaaaaggaacggaggtagt 6091338  T
Q  136 att 138  Q
    |||    
T  6091337 att 6091335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 33751388 - 33751327
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||  ||||| |||||| ||||||||| ||||||||| |||||||||| |||||    
T  33751388 ttgattgtcttagtttgtgtaaaatgtcaaaatgtaacaattaaaaaggaacggagatagta 33751327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 43888180 - 43888241
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||| ||| | ||||||||||||| |||||||||||| ||||||| ||||||||    
T  43888180 ttgattctcttggtttatgtaaaatatcaaaaagtgacaattaaaaaggaacgaaggtagta 43888241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 8456951 - 8456888
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgtta 143  Q
    ||||||| ||||| || ||  ||||||||||||||||||| ||||||||||| |||| ||||||    
T  8456951 tgtcttggtttgtgtagaaagtcaaaatgtgacaattaaaaaggaacggagggagtagttgtta 8456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 139
Target Start/End: Original strand, 48087902 - 48087961
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    ||||||| ||||| ||||| |||||||||||||||||||| |||||| | || |||||||    
T  48087902 tgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacagggggagtattt 48087961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 136
Target Start/End: Complemental strand, 23621611 - 23621577
Alignment:
Q  102 caaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||||| ||||||||||||||||    
T  23621611 caaaatgtgacaattaaaaaggaacggaggtagta 23621577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 23719868 - 23719762
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| |||||||||| ||  | || |||| ||||||  ||| | |||||| ||||||  | ||||||||| |||||||||||||||    
T  23719868 taaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttagtttatgtaaaatgtcaaaaaataacaattaaaaaggaacggaggtagt 23719769  T
Q  136 atttgtt 142  Q
    || ||||    
T  23719768 atgtgtt 23719762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 126
Target Start/End: Complemental strand, 29832436 - 29832354
Alignment:
Q  44 taacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    ||||||||||||||||||||  || ||||| |||||||||||| | |   |||||| |||||| | |||||||||| ||||||    
T  29832436 taacttattgcatcaaaagttgtaacaattattgattgtcttggtataagtaaaatgtcaaaaggagacaattaaaaaggaac 29832354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 36408970 - 36409012
Alignment:
Q  94 taaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  36408970 taaaatgtcaaaatatgacaattaaaaaggaacggaggtagta 36409012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 36423136 - 36423178
Alignment:
Q  94 taaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  36423136 taaaatgtcaaaatatgacaattaaaaaggaacggaggtagta 36423178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 137
Target Start/End: Original strand, 45725703 - 45725797
Alignment:
Q  43 ataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||| |||||| |||||||||| || || || |||| | | ||  ||||| |||||| ||||||  ||||||||||| |||||||||||||||||    
T  45725703 ataatttattgtatcaaaagtagtaacatttattgactttatttgtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagtat 45725797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 47093972 - 47094017
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattg 81  Q
    |||||||||||||||||||||||||||||  | ||||| |||||||    
T  47093972 taaaagtataacttattgcatcaaaagtagaaacaattattgattg 47094017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 47596696 - 47596604
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||| |||| |||||| |||||||||| || || || |||| | | ||| ||||| |||||| ||||||  ||||||||||| |||||||||    
T  47596696 aaaaggataatttattgtatcaaaagtagtaacatttattgactttattggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacgga 47596604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 15893666 - 15893566
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||    
T  15893666 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 15893567  T
Q  136 a 136  Q
    |    
T  15893566 a 15893566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 26342737 - 26342839
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||| |||||||||||| |||||||||||||||    
T  26342737 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaacgtgacaattaaaaaggaacggaggtagt 26342836  T
Q  136 att 138  Q
    |||    
T  26342837 att 26342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 10812356 - 10812457
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  10812356 taaaagtatagcttatggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 10812455  T
Q  136 at 137  Q
    ||    
T  10812456 at 10812457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 44360590 - 44360690
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  44360590 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 44360689  T
Q  136 a 136  Q
    |    
T  44360690 a 44360690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 41885782 - 41885885
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| | |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||| |||||||||||||||    
T  41885782 taaaagtacagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaatgaaaaaggaacggaggtagt 41885881  T
Q  136 attt 139  Q
    ||||    
T  41885882 attt 41885885  T

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Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 14295843 - 14295742
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||  ||||||||    
T  14295843 taaaagtataccttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaattgaggtagt 14295744  T
Q  136 at 137  Q
    ||    
T  14295743 at 14295742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 14308550 - 14308651
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || |||||| |||||    
T  14308550 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagt 14308649  T
Q  136 at 137  Q
    ||    
T  14308650 at 14308651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 36375730 - 36375831
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||| ||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  36375730 taaaattatagcttattgcatcaaaggtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 36375829  T
Q  136 at 137  Q
    ||    
T  36375830 at 36375831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 37093606 - 37093707
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| |||||| ||||||||||||||||||| ||| ||||||| |||    
T  37093606 taaaagtataacttattgcatcaaaagtagtatcaattgttaattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggtacggagggagt 37093705  T
Q  136 at 137  Q
    ||    
T  37093706 at 37093707  T

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Target: chr2; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 3363741 - 3363841
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||||| ||||| |||||| |||||||| |||||||||| |||||||||||||||    
T  3363741 taaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtaaaatgtcaaaatgcgacaattaaaaaggaacggaggtagt 3363840  T
Q  136 a 136  Q
    |    
T  3363841 a 3363841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 15183087 - 15182987
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  15183087 taaaaatatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 15182988  T
Q  136 a 136  Q
    |    
T  15182987 a 15182987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 14288588 - 14288686
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| ||||||| |||||||| |||||||||||  |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  14288588 taaaagtatagcttattgcataaaaagtagtatcaattattgattgtctt--tttgtataaaatatcaaaatgtgacaattaaaaaggaacggaagtagt 14288685  T

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Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 19594507 - 19594608
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||  ||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  19594507 taaaaatatagcttattgcatcaaaagtaatatcaattgttgattatctttgtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagt 19594606  T
Q  136 at 137  Q
    ||    
T  19594607 at 19594608  T

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Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 127
Target Start/End: Complemental strand, 28145657 - 28145566
Alignment:
Q  38 aaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtat--aaaatatcaaaatgtgacaattaaagaggaacg 127  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||||||    
T  28145657 aaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttgatttatataaaaaatatcaaaatgtgacaattaaaaaggaacg 28145566  T

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Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 34399359 - 34399459
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||| |||| | ||||||||||| ||||||| |||||||||||||||    
T  34399359 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaagtgtcaaaatgtgataattaaaaaggaacggaggtagt 34399458  T
Q  136 a 136  Q
    |    
T  34399459 a 34399459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 30264688 - 30264593
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggagg 131  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||| |||||||||||    
T  30264688 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggagg 30264593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 34357335 - 34357438
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||||||||||||||||||| || ||| ||||||||||| ||||| ||||| |||||| || |||||||||||||||| |||||||||||||||    
T  34357335 taaaaatataacttattgcatcaaaaatagtataaattgttgattatcttggtttgtgtaaaatgtcgaaatgtgacaattaaaaaggaacggaggtagt 34357434  T
Q  136 attt 139  Q
    ||||    
T  34357435 attt 34357438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 3376363 - 3376266
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||| |||| ||||||  || ||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||    
T  3376363 taaaaatatagcttattatattaaaagtagtatcaattattgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 3376266  T

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Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 1259703 - 1259615
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||| ||||||||| ||||||||||||||| ||||| ||||| |||||||||||||||| ||||||||| || |||||||||||||    
T  1259703 ttattgcgtcaaaagtagtatcaattgttgattctcttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacggaggtagta 1259615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 14284243 - 14284342
Alignment:
Q  38 aaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| | |||| ||||||||||||||||||| | |||| ||||||||||    
T  14284243 aaagtatagcttattgcatcaaaattagtatcaattgttgattgtcttggtttgtgt-aaatgtcaaaatgtgacaattaaaaaagaactgaggtagtat 14284341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 137
Target Start/End: Complemental strand, 11222403 - 11222301
Alignment:
Q  35 ttaaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||| |||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  11222403 ttaaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtag 11222304  T
Q  135 tat 137  Q
    |||    
T  11222303 tat 11222301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 134
Target Start/End: Original strand, 13965764 - 13965862
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||| ||||||||||| |||||| |||| | ||||| |||||||||||| ||||| |||||| |||||| |||||||||||| ||||||||||||||    
T  13965764 taaaagcataacttattggatcaaatgtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtag 13965862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 136
Target Start/End: Complemental strand, 38072312 - 38072218
Alignment:
Q  42 tataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||| ||||| |||||| | ||||| |||||| |||| ||||||||||||||||    
T  38072312 tatagcttattgcatcaaaagtagtatcaattgttgattgttttggtttgtgtaaaatgttaaaatatgacaaataaaaaggaacggaggtagta 38072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 479059 - 478958
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| |||||||| |||||| ||||| ||||| |||||| | ||||||||||||||||| | |||| ||| ||||    
T  479059 taaaagtatagcttattgcatcaaaagtagtatcaattattgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaagaacagagatagt 478960  T
Q  136 at 137  Q
    ||    
T  478959 at 478958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 36 - 145
Target Start/End: Complemental strand, 11560133 - 11560024
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| | |||||| ||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||||| ||||||| || ||| ||| ||||    
T  11560133 taaaagtacagcttattacatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgataattaaaaagtaacagagatagt 11560034  T
Q  136 atttgttaag 145  Q
    | || |||||    
T  11560033 aatttttaag 11560024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 31011792 - 31011702
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||||| ||||||||||  | || || |||||||||||| |||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  31011792 ttattgtatcaaaagtagcaacatttattgattgtcttggtttgtataaaatgtcaaaatgtaacaattaaaaaggaacggaggtagtatt 31011702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 10263914 - 10264010
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||  ||||||||||||||||| |||||||| ||| |||||||| ||||| |||||| ||||||| |||||||| || |||||||||||||    
T  10263914 taaaagtatagtttattgcatcaaaagtagtatcaatt-ttggttgtcttggtttgtgtaaaatgtcaaaatatgacaatttaaaaggaacggaggta 10264010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 25558272 - 25558172
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||| || ||||||| |||||||||| |||||||| |||||||||||| ||||| |||||| ||||||||| ||||| ||  | |||||||||||||    
T  25558272 taaaagtctagcttattgtatcaaaagtagtatcaatttttgattgtcttggtttgtgtaaaatgtcaaaatgtaacaatcaagaaagaacggaggtagt 25558173  T
Q  136 a 136  Q
    |    
T  25558172 a 25558172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 15677377 - 15677283
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||     || ||||||||||||||||||| ||||||| |||||||    
T  15677377 taaaagtataacttattgcatcaaaagtagtatcaa-tgttgattgtcttggtttgt----gatgtcaaaatgtgacaattaaa-aggaacgaaggtagt 15677284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 115
Target Start/End: Complemental strand, 38186126 - 38186059
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaat 115  Q
    ||||| |||||||| |||||||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  38186126 ttattacatcaaaaataatatcaattgttgattgtcttagtttgtgtaaaatatcaaaatgtgacaat 38186059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 34262889 - 34262807
Alignment:
Q  55 atcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||||| || ||||| |||| ||||||| ||||| |||||||| ||||  ||||||||||| |||||||||||||||||    
T  34262889 atcaaaagtagtaacaattattgaatgtcttggtttgtgtaaaatataaaaaattgacaattaaaaaggaacggaggtagtat 34262807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 136
Target Start/End: Original strand, 4654885 - 4654976
Alignment:
Q  45 aacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||||||| || ||||  |||| | | ||| ||| | |||||| |||||||| |||||||||| ||||||||||||||||    
T  4654885 aacttattgcatcaaaagtagtaacaatcattgactattttggtttatgtaaaatgtcaaaatgagacaattaaaaaggaacggaggtagta 4654976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 36404927 - 36404844
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||| ||||||||||||||||||||||| || ||||  |||| | ||||| ||  | ||||||||||||||||||||||||||    
T  36404927 taaaaatataacttattgcatcaaaagtagtaacaatcattgactatcttggttcatgtaaaatatcaaaatgtgacaattaaa 36404844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 43077463 - 43077546
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||| ||||||||||||| || || |||||||||||| ||||| |||||| | ||||  ||||||||||| |||||||||||||    
T  43077463 attgtatcaaaagtaataacacttattgattgtcttggtttgtgtaaaatgttaaaaaatgacaattaaaaaggaacggaggta 43077546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 13849787 - 13849701
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| |||||  | || |||||||| ||| ||| |||||||||||||||  ||||||||||| ||||||||||||||||    
T  13849787 attgtatcaaaactaataatatttattgattgttttggtttatataaaatatcaaaaaatgacaattaaaaaggaacggaggtagta 13849701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 8443874 - 8443935
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||| ||||| |||||| |||||| |||||||||||| |||||| |||||||||    
T  8443874 ttgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagta 8443935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 13754112 - 13754212
Alignment:
Q  36 taaaagta-taacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||||||| ||| |||||| |||||||||| || || ||  ||||||||||| ||||| |||||| |||||| |||||||||||| ||||||||| ||||    
T  13754112 taaaagtagtaaattattgtatcaaaagtagtaacatttaatgattgtcttggtttgtgtaaaatgtcaaaa-gtgacaattaaaaaggaacggaagtag 13754210  T
Q  135 ta 136  Q
    ||    
T  13754211 ta 13754212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 9706944 - 9707044
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| |  ||||| |||||||||| ||  | || |||||||| ||| ||||| |||||| |||||| |||||||||||| |||||||| ||||||    
T  9706944 taaaagtatgaaatattgtatcaaaagtagtaatatttattgattgtattggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgggggtagt 9707043  T
Q  136 a 136  Q
    |    
T  9707044 a 9707044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 13215564 - 13215652
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| |||||||||| || || || |||| ||| ||| ||||| |||||| |||||| || ||||||||| ||||||||||||||||||    
T  13215564 attgtatcaaaagtagtaacatttattgagtgtattggtttgtgtaaaatgtcaaaaagtaacaattaaaaaggaacggaggtagtatt 13215652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 37354190 - 37354246
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||| ||||| || |||||||||||||||||  |||||||||||||||    
T  37354190 tgtcttgatttgtgtaaaaaattaaaatgtgacaattaaaatggaacggaggtagta 37354246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 35158437 - 35158336
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| |||||||||| ||  | || |||| ||||||| ||  | |||||| |||||| |||||||||||| || ||||||||||||    
T  35158437 taaaagtatatattattgtatcaaaagtagtaatatttattgaatgtcttggttcatgtaaaatgtcaaaaagtgacaattaaaaagaaacggaggtagt 35158338  T
Q  136 at 137  Q
    ||    
T  35158337 at 35158336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 14541527 - 14541579
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacg 127  Q
    |||||||| ||| |||||||||||| |||||| |||||||||||| |||||||    
T  14541527 ttgattgtattggtttgtataaaatgtcaaaaagtgacaattaaaaaggaacg 14541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 25787527 - 25787587
Alignment:
Q  79 ttgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||||||| ||||| |||||  ||||||||||||||||||| |||||| |||| |||||||    
T  25787527 ttgtcttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacagagggagtattt 25787587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 31024987 - 31024926
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| ||||||||||||| || ||| ||||| ||||||||| ||||||    
T  31024987 ttgagtgtcttggtttgtgtaaaatatcaaaaagttacagttaaaaaggaacggatgtagta 31024926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 13000985 - 13000897
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| |||||||||| || || || ||||||||||| |||||| |||||| ||| || || ||||||||| | |||| || ||||||    
T  13000985 ttattgtatcaaaagtagtaacatttattgattgtcttaatttgtgtaaaatgtcacaaagtaacaattaaaaaagaacagatgtagta 13000897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 364626 - 364525
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  364626 taaaagtatagcttattgcatcaaaagtaagatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaagaaacggaggtagt 364527  T
Q  136 at 137  Q
    ||    
T  364526 at 364525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 3621747 - 3621848
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| |||||| ||||||||    
T  3621747 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtagt 3621846  T
Q  136 at 137  Q
    ||    
T  3621847 at 3621848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 1751515 - 1751415
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||||    
T  1751515 taaaagtataacttattgcatcaaaagtagtatcaattgttgattatcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggaggtagt 1751416  T
Q  136 a 136  Q
    |    
T  1751415 a 1751415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 24663536 - 24663636
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||| |||||    
T  24663536 taaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagt 24663635  T
Q  136 a 136  Q
    |    
T  24663636 a 24663636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 22050205 - 22050305
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||    
T  22050205 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 22050304  T
Q  136 a 136  Q
    |    
T  22050305 a 22050305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 17124069 - 17123966
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||  ||||| |||||| ||||||||||||||||||| ||||| ||||||| |    
T  17124069 taaaagtataacttattgcatcaaaagtagtatcaattattgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaatggaggtaat 17123970  T
Q  136 attt 139  Q
    ||||    
T  17123969 attt 17123966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 32359524 - 32359421
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||| | | |||||| || ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||    
T  32359524 taaaagtatagcttattgcatcaaaagaagtgtcaattattaattgtcttggtttgtataaaatatcaaaatgtaacaattaaaaaggaacggaggtagt 32359425  T
Q  136 attt 139  Q
    ||||    
T  32359424 attt 32359421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 3850477 - 3850587
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| ||| | |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  3850477 taaaaatatagcttgtggcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgacaattaaaaagtaacggaggtagt 3850576  T
Q  136 atttgttaagg 146  Q
    |  ||||||||    
T  3850577 acatgttaagg 3850587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 136
Target Start/End: Original strand, 17193322 - 17193415
Alignment:
Q  43 ataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||| |||||| |||||||||||| ||||||||||||||||    
T  17193322 ataacttattgcatcaaaagtaggatcaattgttgattgtcttggtttatataaaatgtcaaaacgtgacaattaaaaaggaacggaggtagta 17193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 12732332 - 12732432
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||| |||||| | ||||||||||||||||| ||||||||| |||||    
T  12732332 taaaagtatagcttattgcatcaaaagtagtatcaattgttaattgtcttgttttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaagtagt 12732431  T
Q  136 a 136  Q
    |    
T  12732432 a 12732432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 17836050 - 17836150
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||| |||||||  |||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||| |||||    
T  17836050 taaaagtatagcttattgcattaaaagtagaatcaattgttgattgtcttggtttgtgtaaaatatcaatatgtgacaattaaaaaggaacggatgtagt 17836149  T
Q  136 a 136  Q
    |    
T  17836150 a 17836150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 23923797 - 23923695
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||| ||| ||||||| ||||||||||||||||||||| |||||  ||||| ||||||||||||||||||| ||||| ||| |||||    
T  23923797 taaaagtatagcttattacattaaaagtagtatcaattgttgattgtcttggtttgtgcaaaatgtcaaaatgtgacaattaaaaaggaatggatgtagt 23923698  T
Q  136 att 138  Q
    |||    
T  23923697 att 23923695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 26470807 - 26470706
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||| | |||||| |||||| |||||||||||| ||||| || ||||||    
T  26470807 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaaagggggtagt 26470708  T
Q  136 at 137  Q
    ||    
T  26470707 at 26470706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 30388934 - 30389023
Alignment:
Q  47 cttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||| || ||| ||||||||||||||||| ||||| |||||| ||||||||||| ||||||| ||||||||||||||||    
T  30388934 cttattgcatcaaaaatagtattaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgataattaaaaaggaacggaggtagta 30389023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 7056224 - 7056124
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||| ||||||||||||||||||||||| |  |||| |||||| ||||||||||| |||||| |||||| |||||||||||| ||| |||||||||||    
T  7056224 taaaagaataacttattgcatcaaaagtaaaaataattattgattatcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggtacggaggtagt 7056125  T
Q  136 a 136  Q
    |    
T  7056124 a 7056124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 8176590 - 8176690
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||||||||  | ||||| |||||||||||||||||| |||||| | |||| |||||||||||| | |||| ||| ||||    
T  8176590 taaaagtataacttattgcatcaaaagtagaaacaattattgattgtcttgatttgtgtaaaatgttaaaaagtgacaattaaaaaagaacagagatagt 8176689  T
Q  136 a 136  Q
    |    
T  8176690 a 8176690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 30416159 - 30416059
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||||||| ||| | |||||| |||| || ||| ||||||| |||||||||||||||    
T  30416159 taaaagtataacttattgtatcaaaagtagtaacaattattgattgtcttggtttatgtaaaatgtcaacatatgataattaaaaaggaacggaggtagt 30416060  T
Q  136 a 136  Q
    |    
T  30416059 a 30416059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 373880 - 373963
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||  ||||||||||||||||| ||||||||| ||||||||||| ||| | |||||| |||||||||||||||||||    
T  373880 taaaagtatagtttattgcatcaaaagtagtatcaattgctgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaa 373963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 8992705 - 8992795
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaa-ttgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaa 125  Q
    ||||||||||||||||||||||||||||| || ||| ||  ||||| ||||| ||||| |||||||||||||||||||||||||| |||||    
T  8992705 taaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 8992795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 9017152 - 9017242
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaa-ttgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaa 125  Q
    ||||||||||||||||||||||||||||| || ||| ||  ||||| ||||| ||||| |||||||||||||||||||||||||| |||||    
T  9017152 taaaagtataacttattgcatcaaaagtagtaacaaattactgattatcttggtttgtgtaaaatatcaaaatgtgacaattaaaaaggaa 9017242  T

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Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 31244819 - 31244729
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttg 140  Q
    |||| |||||||||| || || || |||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  31244819 attgtatcaaaagtactaccatttattgattgtcttggtttgtgtaaaaaatcaaaatgtgacaattaaaaaggaacggatgtagtatttg 31244729  T

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Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 1252335 - 1252424
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||| ||||||||||| ||||||||||||||||||||  ||| |||||||| ||||||||||| ||||||| | |||||||| ||||||    
T  1252335 ttattacatcaaaagtagtatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgataattaaaaatgaacggagatagtat 1252424  T

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Target: chr6; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 7632121 - 7632030
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacg 127  Q
    |||||||||||||||||||||||||| || ||  |||| |||||||||||||||| |||||||| |||||| ||||  |||||| |||||||    
T  7632121 taaaagtataacttattgcatcaaaaatagtaataattattgattgtcttgatttatataaaatgtcaaaaagtgattattaaaaaggaacg 7632030  T

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Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 53798 - 53886
Alignment:
Q  47 cttattgca-tcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||| ||||||||| || ||||| |||||||||||| | | | |||||||||||||||||||||||||| || |||||||||||    
T  53798 cttattgcaatcaaaagtagtaacaattattgattgtcttggtatatgtaaaatatcaaaatgtgacaattaaaaagaaacggaggtag 53886  T

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Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 9838206 - 9838106
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| | |||||| |||||||||| || || || |||||||| ||||||||| |||||||||| ||  ||||||||||| |||||| ||||||||    
T  9838206 taaaagtatcaattattgtatcaaaagtagtaacatttattgattgttttgatttgtgtaaaatatcacaaaatgacaattaaaaaggaacagaggtagt 9838107  T
Q  136 a 136  Q
    |    
T  9838106 a 9838106  T

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Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 143
Target Start/End: Complemental strand, 26485769 - 26485662
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| |||||||||| || || || |||| ||||||| ||| | |||||| |||||| |||||||||||| |||||| ||||||||    
T  26485769 taaaagtatatattattgtatcaaaagtagtaacatttattgaatgtcttggtttatgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtagt 26485670  T
Q  136 atttgtta 143  Q
    ||| ||||    
T  26485669 attagtta 26485662  T

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Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 1924009 - 1924099
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaac 126  Q
    ||||||||||| ||||| |||||||| ||||| || || |||||| ||||| ||| |||||||| | |||| |||||||||||||||||||    
T  1924009 taaaagtataaattatttcatcaaaattaataacatttattgattatcttggtttatataaaatgtgaaaaagtgacaattaaagaggaac 1924099  T

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Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 11129002 - 11129086
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    |||| |||||||||| || || || || ||||||||||||||| |||||| |||||| |||||||||||| |||||| |||||||    
T  11129002 attgtatcaaaagtagtaacatttattaattgtcttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagaggtag 11129086  T

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Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 24356119 - 24356035
Alignment:
Q  55 atcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||||||||| || || || |||||||| ||| |||| |||||||||||||| |||||||||||| || |||||| |||||||||    
T  24356119 atcaaaagtagtaacatttattgattgttttggtttggataaaatatcaaaaagtgacaattaaaaagaaacggatgtagtattt 24356035  T

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Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 24949264 - 24949364
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| || | |||| |||||||||| || || || |||||||| ||| ||||| |||||||||||||  | ||||||||| |||||||||||||||    
T  24949264 taaaagtaaaaataattgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatatcaaaaaataacaattaaaaaggaacggaggtagt 24949363  T
Q  136 a 136  Q
    |    
T  24949364 a 24949364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 17251300 - 17251239
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||| ||||| |||||| | |||| |||||||||||| ||||||||||||||||    
T  17251300 ttgattgtcttggtttgtgtaaaatgttaaaaagtgacaattaaaaaggaacggaggtagta 17251239  T

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Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 23777453 - 23777550
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||  |||||| |||||||||| || || || || | ||||||| ||||| |||||| |||||| |||||||||||| ||||||| |||||    
T  23777453 taaaagtatatattattgtatcaaaagtagtaacatttatttaatgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacgaaggta 23777550  T

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Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 34379055 - 34379116
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| ||||||||||||| |||||| ||||| ||||||||||||||||    
T  34379055 ttgagtgtcttggtttgtgtaaaatatcaaaaagtgacagttaaaaaggaacggaggtagta 34379116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 34607255 - 34607355
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  || ||| |||||||||| || || |  |||| ||||||| |||||||||||| ||||||  | ||||||||| |||||||||||||||    
T  34607255 taaaagtatacattgttgtatcaaaagtagtaacattcattgaatgtcttggtttgtataaaatgtcaaaaattaacaattaaaaaggaacggaggtagt 34607354  T
Q  136 a 136  Q
    |    
T  34607355 a 34607355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 142
Target Start/End: Original strand, 1249708 - 1249802
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatttgtt 142  Q
    |||||| ||||||| || || || || |||||||||||  ||| |||||||||||| || |||||||||||| ||||||| | ||||||| ||||    
T  1249708 ttattgtatcaaaaatagtaacatttattgattgtcttagtttatataaaatatcataaagtgacaattaaaaaggaacgaatgtagtatatgtt 1249802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 11676685 - 11676599
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| ||  | || |||||||||||| ||||| ||||||||||||| || ||||||||| | ||| ||||||||||    
T  11676685 attgtatcaaaagtagtaatatttattgattgtcttggtttgtgtaaaatatcaaaaagtaacaattaaaaatgaatggaggtagta 11676599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 22784752 - 22784659
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||  |||||| |||||||||| ||||| || |||| | ||||| ||| | |||||| | |||| |||||||||||| |||||||||    
T  22784752 taaaagtatacattattgtatcaaaagtagtatcatttattgaatatcttggtttatgtaaaatgttaaaaagtgacaattaaaaaggaacgga 22784659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 34730756 - 34730816
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  34730756 ttgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaaggaacggaggtagta 34730816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 11431241 - 11431158
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||| |||||| ||||||||||  |  |  | |||||||||||||||||| ||| || | |||||||||||||||||    
T  11431241 taaaagtataagttattgtatcaaaagtaggaatagctattgattgtcttgatttgtgtaacatgtaaaaatgtgacaattaaa 11431158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 132
Target Start/End: Complemental strand, 17601211 - 17601121
Alignment:
Q  42 tataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||| |||||| ||||||||||  | || || |||||||||||  ||||| |||||  ||||||||||||||||||| || ||| |||||    
T  17601211 tataaattattgtatcaaaagtagcaacatttattgattgtcttagtttgtgtaaaacgtcaaaatgtgacaattaaaaagaaacagaggt 17601121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 19645767 - 19645706
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||  ||||| |||||| |||||| |||||||||||| | ||||||| ||||||    
T  19645767 ttgattgtcttagtttgtgtaaaatgtcaaaaagtgacaattaaaaaagaacggaagtagta 19645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 27313661 - 27313710
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttg 86  Q
    ||||| ||||||||||||||||||||||| | ||||| |||||| |||||    
T  27313661 aaaagaataacttattgcatcaaaagtaaaaacaattattgattatcttg 27313710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 137
Target Start/End: Complemental strand, 27605448 - 27605415
Alignment:
Q  104 aaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||||||||||| |||||||||||||||||    
T  27605448 aaatgtgacaattaaaaaggaacggaggtagtat 27605415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 33260901 - 33260962
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||| ||||| |||||| |||||| |||||| ||| | ||||||||||||||||    
T  33260901 ttgattatcttggtttgtgtaaaatgtcaaaaagtgacagttataaaggaacggaggtagta 33260962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 34266529 - 34266429
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||| |||||| |||||||||||||||    
T  34266529 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaaaaggaacggaggtagt 34266430  T
Q  136 a 136  Q
    |    
T  34266429 a 34266429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 47069946 - 47069844
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || |||||| |||||    
T  47069946 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagaaacggatgtagt 47069847  T
Q  136 att 138  Q
    |||    
T  47069846 att 47069844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 29803805 - 29803905
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||||||| | || ||||||||||||||||||||| || || |||||||||||||||||||||||||| |||||||||||||||    
T  29803805 taaaagtataacttattgcatcaataatagtatcaattgttgattgtcttggttcgtgtaaaatatcaaaatgtgacaattaaaaaggaacggaggtagt 29803904  T
Q  136 a 136  Q
    |    
T  29803905 a 29803905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 140
Target Start/End: Complemental strand, 53745371 - 53745267
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||| ||||||||| |||||    
T  53745371 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagt 53745272  T
Q  136 atttg 140  Q
    |||||    
T  53745271 atttg 53745267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 35315289 - 35315391
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||| ||||||  ||||||||||| |||||||||| ||||    
T  35315289 taaaagtataacttattgcatcaaaagtagtaacaattgttgattgtcttgatttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggagttagt 35315388  T
Q  136 att 138  Q
    |||    
T  35315389 att 35315391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 790707 - 790804
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||  |||||| |||||||||||||    
T  790707 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatgtgatcattaaaaaggaacggaggta 790804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 19550403 - 19550504
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||| |||||||| ||||||    
T  19550403 taaaaatatagcttattgcatcaaaagtaatatcaattgttgattgtcttagtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacgggggtagt 19550502  T
Q  136 at 137  Q
    ||    
T  19550503 at 19550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 29698148 - 29698245
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    |||||||||| ||||||||||||||| || |||||||||||||||||||| |||||| |||||| ||||||||||||||||||| |||||||||||||    
T  29698148 taaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttaatttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggta 29698245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 43554546 - 43554647
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||| |||||| ||||||||||||||||||| || ||||||||||||    
T  43554546 taaaagtatagcttattgcatcaaaagtatgatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaagtaacggaggtagt 43554645  T
Q  136 at 137  Q
    ||    
T  43554646 at 43554647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 27483877 - 27483777
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||||||||| |||||| ||||||||    
T  27483877 taaaaatataacttattgcatcaaaagtagtatcaattgttgattgtcctgatttgtataaaatgttaaaatatgacaattaaaaaggaacagaggtagt 27483778  T
Q  136 a 136  Q
    |    
T  27483777 a 27483777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 42671979 - 42671879
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||||||||||||||| | |||||||||||||    
T  42671979 taaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttagtttatataaaatgtcaaaatgtgacaattaaaaaagaacggaggtagt 42671880  T
Q  136 a 136  Q
    |    
T  42671879 a 42671879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 54106420 - 54106520
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||||||||| ||||||||| |||||||||||||||    
T  54106420 taaaagtatagtttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtaacaattaaaaaggaacggaggtagt 54106519  T
Q  136 a 136  Q
    |    
T  54106520 a 54106520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 51219185 - 51219080
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttg---attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    ||||||||||||||||||||||||||||| ||||||||||||   ||||||||| ||||| |||||| |||| |||||||||||||| ||||||||||||    
T  51219185 taaaagtataacttattgcatcaaaagtagtatcaattgttgttgattgtcttggtttgtgtaaaatgtcaatatgtgacaattaaaaaggaacggaggt 51219086  T
Q  133 agtatt 138  Q
    ||||||    
T  51219085 agtatt 51219080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 32980797 - 32980898
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |||||| ||||||||||||||||||| |||||| || |||||    
T  32980797 taaaagtataacttattgcatcaaaagtattaacaattattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagatgtagt 32980896  T
Q  136 at 137  Q
    ||    
T  32980897 at 32980898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 43945536 - 43945637
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||||||||||| || ||||||||||||||||||||| ||| |||||||| |||||||||||||| |||| |||||||||||||||    
T  43945536 taaaagtatagtttattgcatcaaaaatagtatcaattgttgattgtcttggtttatataaaatgtcaaaatgtgacaactaaaaaggaacggaggtagt 43945635  T
Q  136 at 137  Q
    ||    
T  43945636 at 43945637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 45101446 - 45101347
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||| ||||||||||||||||||  ||||  |||||||||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  45101446 aaaagtatagcttattgcatcaaaagtagcatcagctgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagta 45101347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 27992397 - 27992499
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||| |||  |||| |||||| ||||||||||||||||||| |||||| |||||| |    
T  27992397 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtattgggttgtgtaaaatgtcaaaatgtgacaattaaaaaggaacagaggtaat 27992496  T
Q  136 att 138  Q
    |||    
T  27992497 att 27992499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 46973580 - 46973673
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||| |||||||||||||||| ||||||||| || ||||||    
T  46973580 taaaagtataacttattgcatcaaaagtagtatcaattgttgattgctttggtttgtgtaaaatatcaaaatgtaacaattaaaaagaaacgga 46973673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 54898175 - 54898086
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaa 125  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| | |||||| ||||||||||||||||||| |||||    
T  54898175 taaaagtatagcttattgcatcaaaagtagtatcaattgttgattgtcttggtttatgtaaaatgtcaaaatgtgacaattaaaaaggaa 54898086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 29651825 - 29651925
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||| ||| ||||| |||||| | ||||||||||||||||| | |||||||||||||    
T  29651825 taaaagtatagcttattgcatcaaaagtagtatcaactgttgattgttttggtttgtgtaaaatgtaaaaatgtgacaattaaaaaagaacggaggtagt 29651924  T
Q  136 a 136  Q
    |    
T  29651925 a 29651925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 45145285 - 45145385
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||| |||||||||||  |||| |||||||||||| ||||| |||||||||||||  ||||||||||| ||||| |||||||||    
T  45145285 taaaagtataacttattgcagcaaaagtaataataattattgattgtcttggtttgtgtaaaatatcaaaaaatgacaattaaaaaggaaaggaggtagt 45145384  T
Q  136 a 136  Q
    |    
T  45145385 a 45145385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 52627327 - 52627227
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||| ||||| | ||   ||||| ||||||||||||||||||| |||||||||| ||||    
T  52627327 taaaagtataacttattgcatcaaaagtaatatcaatcgttaattatcttggtatgaggaaaatgtcaaaatgtgacaattaaaaaggaacggagatagt 52627228  T
Q  136 a 136  Q
    |    
T  52627227 a 52627227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 36234524 - 36234621
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||| ||||||||||   ||| || ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| |||||    
T  36234524 taaaagtatagcttattgtatcaaaagta---tcactttttgattgtcttaatttgtgtaaaatatcaaaatgtgacaattaaaaaggaacggatgtagt 36234620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 52663600 - 52663693
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||||||| ||||| | |||| ||||||| ||||||||||| | ||||||||    
T  52663600 aaaagtatagcttattgcatcaaaagtagtatcaattattgattgtcttggtttgtgtgaaatgtcaaaatatgacaattaaaaatgaacggag 52663693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 6902435 - 6902527
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgg 128  Q
    ||||| |||| |||||||||||||| ||| |||||||||||||| |||||| ||||| |||||||||||||||||||| ||||| || |||||    
T  6902435 taaaattatagcttattgcatcaaatgtagtatcaattgttgatggtcttggtttgtgtaaaatatcaaaatgtgacagttaaaaagaaacgg 6902527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 13158528 - 13158428
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||  |||||||||| |||||||| || ||||||||| ||| | |||||| ||||||| | ||||||||| |||||||||||||||    
T  13158528 taaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagt 13158429  T
Q  136 a 136  Q
    |    
T  13158428 a 13158428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 33491228 - 33491128
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||  |||| | ||||  ||| | |||||| ||||||||||||||||||| |||||||||||||||    
T  33491228 taaaagtataacttattgcatcaaaagtagtaacaatcattgactatcttagtttatgtaaaatgtcaaaatgtgacaattaaaaaggaacggaggtagt 33491129  T
Q  136 a 136  Q
    |    
T  33491128 a 33491128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 39866938 - 39866839
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||| ||||||||||||||||||||||| | ||||| |||||||||||| ||||| |||||| |||||| |||||||||||| | ||||| |||||||    
T  39866938 taaaagcataacttattgcatcaaaagtaaaaacaattattgattgtcttggtttgtgtaaaatgtcaaaaagtgacaattaaa-aagaacgaaggtagt 39866840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 51697651 - 51697571
Alignment:
Q  37 aaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaatta 117  Q
    ||||||||| ||||||||||||||| || ||||||||||||||||||||| ||||| |||||| ||||||| |||||||||    
T  51697651 aaaagtatagcttattgcatcaaaaatagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatatgacaatta 51697571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 40139923 - 40139828
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| |        ||||||||||||||||| |||||||||||||||    
T  40139923 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtcttggtttgtgt--------aaaatgtgacaattaaaaaggaacggaggtagt 40139832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 41168916 - 41169008
Alignment:
Q  40 agtataacttattgcatcaaaagtaata---tcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    |||||| |||||||||||||||||| ||   ||||||||||||||||||| ||||| |||||| ||||||||||||||||||| | |||||||    
T  41168916 agtatagcttattgcatcaaaagtagtagtatcaattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgga 41169008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 45513377 - 45513307
Alignment:
Q  66 tatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||    
T  45513377 tatcaattgttgattgttttgatttgtgtaaaatatcaaaatatgacaattaaaaaggaacggatgtagta 45513307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 51244792 - 51244878
Alignment:
Q  47 cttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||| || ||||||||||||||||||||| ||||| |||||||||||||| | |||| |||| || ||||||||||    
T  51244792 cttattgcatcaaaactagtatcaattgttgattgtcttggtttgtgtaaaatatcaaaatattacaagtaaaaagaaacggaggta 51244878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 24981447 - 24981540
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacgga 129  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||| ||||  |||||  ||||| ||||||||||||||||||| | |||||||    
T  24981447 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattatcttagtttgtgcaaaatgtcaaaatgtgacaattaaaaaagaacgga 24981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 13168193 - 13168261
Alignment:
Q  67 atcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||| |||||    
T  13168193 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 13168261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 43775479 - 43775379
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| |||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| ||||||||||| ||||||| |||||||||||||||    
T  43775479 taaaagtacaacttattgcatcaaaagtagtaacaatcattgactatcttggtttatgtaaaatgtcaaaatgtgaaaattaaaaaggaacggaggtagt 43775380  T
Q  136 a 136  Q
    |    
T  43775379 a 43775379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 45055344 - 45055446
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||| ||||||||||| |  |||| |||||||||||||||| | |||||||| ||||  ||||||||||| | ||||||| ||| |    
T  45055344 taaaagtataacttattgtatcaaaagtaaaaataattattgattgtcttgatttatgtaaaatattaaaaattgacaattaaaaaagaacggaagtaat 45055443  T
Q  136 att 138  Q
    |||    
T  45055444 att 45055446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 49123694 - 49123779
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||||| ||| |||||||||   ||| ||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||    
T  49123694 ttattgcatcaaatgtagtatcaattg---attatcttgatttgtgtaaaatgtcaaaatgtgactattaaaaaggaacggaggtagta 49123779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 41926835 - 41926937
Alignment:
Q  36 taaaagtataacttattgcatcaaa---agtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggt 132  Q
    |||||||||||||||||||||||||   |||| || ||||| |||||||||||| ||||| |||||| | |||| |||||||||||| |||||| |||||    
T  41926835 taaaagtataacttattgcatcaaaagtagtagtaacaattattgattgtcttggtttgtgtaaaatgt-aaaaagtgacaattaaaaaggaacagaggt 41926933  T
Q  133 agta 136  Q
    ||||    
T  41926934 agta 41926937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 41425798 - 41425886
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| ||||||||||  | || || |||||||||||| ||||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  41425798 ttattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 41425886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Complemental strand, 41351283 - 41351180
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||  |||||||||| || || |  |||| ||||||||||| | |||||||||| || |||||||||||| |||||||||||||||    
T  41351283 taaaagtatatattattatatcaaaagtagtaacattaattgaatgtcttgatttatgtaaaatatcagaaagtgacaattaaaaaggaacggaggtagt 41351184  T
Q  136 attt 139  Q
    ||||    
T  41351183 attt 41351180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 54911390 - 54911308
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||||| || | | |||||| | |||||||||||||||||    
T  54911390 taaaagtataacttattgcatcaaaagtagtaacaattattgattgtctt-atatatgtaaaattttaaaatgtgacaattaaa 54911308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 3643285 - 3643184
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||| || | |||| |||||||||| || || || |||||||| ||||||||| |||||| |||||| |||||| ||||| ||||| |||||||||    
T  3643285 taaaagtaaaaataattgtatcaaaagtagtaacatttcttgattgtattgatttgtgtaaaatgtcaaaaagtgacacttaaaaaggaatggaggtagt 3643186  T
Q  136 at 137  Q
    ||    
T  3643185 at 3643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 11660958 - 11661002
Alignment:
Q  137 tttgttaaggtgtataagtttacaatattaaggaatcgttaatgc 181  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11660958 tttgttaaggtgtataagtttacaatattaaggaatcattaatgc 11661002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 20105349 - 20105430
Alignment:
Q  47 cttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||||||||||||||  ||||||||||||||||||||||||| | |        ||||||||||||||||| ||||||||||||||||    
T  20105349 cttattgcatcaaaagtggtatcaattgttgattgtcttgatttatgt--------aaaatgtgacaattaaaaaggaacggaggtagta 20105430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 138
Target Start/End: Complemental strand, 20848799 - 20848711
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    |||| |||||||||| || || || |||||| | ||| ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  20848799 attgtatcaaaagtagtaacatttattgattattttggtttgtgtaaaatgtcaaaatgtgacagttaaaaaggaacggaggtagtatt 20848711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 2858664 - 2858566
Alignment:
Q  38 aaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||||| || |||||| ||||||||||  | |  || |||||||||||| | ||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  2858664 aaagtagaaattattgtatcaaaagtagcaacctttattgattgtcttggtctgtgtaaaatgttaaaatgtgacaattaaaaaggaacggaggtagta 2858566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 33874621 - 33874535
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||| ||| ||||| |||||| ||||||  ||||||||||| ||||||||||||||||    
T  33874621 attgtatcaaaagtagtaacatttattgattgttttggtttgtgtaaaatgtcaaaaaatgacaattaaaaaggaacggaggtagta 33874535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Original strand, 48152142 - 48152236
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    ||||||||| |  ||||| |||||||||||||  | || |||||||| ||||||||| |||||||| ||||  ||||||||||| ||||||||||    
T  48152142 taaaagtatgaagtattgtatcaaaagtaataatatttattgattgtattgatttgtgtaaaatataaaaaaatgacaattaaaaaggaacggag 48152236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 33074355 - 33074266
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||| ||||||||||  | || || |||||||||||| ||||| |||||| |||||||||||||| |||| ||||||| || ||||||    
T  33074355 ttattgtatcaaaagtagcagcatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacaaataaaaaggaacgtagatagtat 33074266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 137
Target Start/End: Complemental strand, 40319005 - 40318916
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||| ||||||||||  | || || |||||| ||||| ||||| |||||| | ||||||||||||||||| | |||||||||||||||    
T  40319005 ttattgtatcaaaagtagcaacatttattgattatcttggtttgtgtaaaatgttaaaatgtgacaattaaaaatgaacggaggtagtat 40318916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 7329004 - 7329084
Alignment:
Q  59 aaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||||| || ||||| |||||||||||  ||||| |||||| | ||||||||||||||||| || || |||||||||||||    
T  7329004 aaagtagtaacaattattgattgtcttagtttgtgtaaaatgttaaaatgtgacaattaaaaagaaatggaggtagtattt 7329084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 17102911 - 17102994
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||| ||||||||||||||||| || ||||| || ||||| || |||||| |||||| ||||||  | |||||||||    
T  17102911 taaaagtataaattattgcatcaaaagtagtaacaattattaattgttttaatttgtgtaaaatgtcaaaaaataacaattaaa 17102994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 25983751 - 25983669
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    ||||||||||||||||| |||||||| || || ||||||| |||| |||| |||||| |||||| ||||||  |||||||||||    
T  25983751 taaaagtataacttatt-catcaaaaatagtaacaattgtagattatcttaatttgtgtaaaatgtcaaaaactgacaattaaa 25983669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 31610151 - 31610081
Alignment:
Q  60 aagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggag 130  Q
    |||||||| || || |||||||||||||||| | ||||||||||||| |||||||||| | | ||||||||    
T  31610151 aagtaataacatttattgattgtcttgatttatgtaaaatatcaaaaagtgacaattataaaagaacggag 31610081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 28885836 - 28885917
Alignment:
Q  38 aaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||| |||||||||||||||||||| || ||||  |||| | ||||| ||| | |||||| | |||||||||||||||||    
T  28885836 aaagtacaacttattgcatcaaaagtagtaacaataattgactatcttggtttatgtaaaatgttaaaatgtgacaattaaa 28885917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 40010714 - 40010653
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| ||||| ||||||||||||| || ||| ||||| ||||||||||||||||    
T  40010714 ttgagtgtcttggtttgtgtaaaatatcaaaaagtaacacttaaaaaggaacggaggtagta 40010653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 47843888 - 47843832
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||||||| | ||||| |||||||||||||||||||| |||||| |||| ||||    
T  47843888 tgtcttgatttatgtaaaaaatcaaaatgtgacaattaaaaaggaacagagggagta 47843832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 29458280 - 29458209
Alignment:
Q  48 ttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaa 119  Q
    |||||| ||||||||||  | || || |||||||||||| ||||| |||||| |||||||||||| ||||||    
T  29458280 ttattgtatcaaaagtagcaacatttattgattgtcttggtttgtgtaaaatgtcaaaatgtgacgattaaa 29458209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 52173923 - 52174000
Alignment:
Q  55 atcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtag 134  Q
    ||||||||||||| || || || ||||||||| ||||| |||| |||||||| |||||||||||| ||||||||| ||||    
T  52173923 atcaaaagtaataaca-ttattaattgtcttggtttgtgtaaa-tatcaaaaagtgacaattaaaaaggaacggatgtag 52174000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 26748552 - 26748610
Alignment:
Q  79 ttgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||||||||| |||||  ||||||||||||||||||| ||| || |||| |||||    
T  26748552 ttgtcttgatttgtgtaaaaagtcaaaatgtgacaattaaaaagggacagagggagtat 26748610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 32853435 - 32853349
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| || || || |||||||||||  ||||| |||||| |||||| || ||||||||| ||||| |||| |||||    
T  32853435 attgtatcaaaagtagtaacatttattgattgtcttagtttgtgtaaaatgtcaaaaagttacaattaaaaaggaatggagatagta 32853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 137
Target Start/End: Complemental strand, 42515224 - 42515162
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||||||| ||||| |||||| | |||| || ||||||||| ||||||||| |||||||    
T  42515224 ttgattgtcttggtttgtgtaaaatgttaaaaagttacaattaaaaaggaacggatgtagtat 42515162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 48214212 - 48214314
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| |  ||||| |||||||||| ||  | || |||||||| ||| | ||| |||||| |||||| |||||||||||| |||||| || |||||    
T  48214212 taaaagtatgaagtattgtatcaaaagtagtaatatttattgattgtattggtgtgtgtaaaatgtcaaaaagtgacaattaaaaaggaacagatgtagt 48214311  T
Q  136 att 138  Q
    |||    
T  48214312 att 48214314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 30861631 - 30861533
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||| |||||| || | ||  |||| || ||||||  ||||||| ||||| ||||||||||||| ||||   ||||| |||||||||||||||    
T  30861631 taaaagtataaattattgtataagaaaaaataacatttgttg--tgtcttggtttgtgtaaaatatcaaaaagtgaacgttaaaaaggaacggaggtagt 30861534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 35458549 - 35458492
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||||| ||||| |||||  | ||||||||||||||||| || ||||||||||||||    
T  35458549 tgtcttggtttgtgtaaaaagttaaaatgtgacaattaaaaagaaacggaggtagtat 35458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 53290798 - 53290749
Alignment:
Q  88 tttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||| |||||    
T  53290798 tttgtgtaaaaaatcaaaatatgacaattaaaaaggaacggaggaagtat 53290749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 28226620 - 28226676
Alignment:
Q  83 cttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||| ||||| |||||  ||||||||||||||||||| ||||||||| | |||||||    
T  28226620 cttggtttgtgtaaaaagtcaaaatgtgacaattaaaaaggaacggatgaagtattt 28226676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 50092146 - 50092202
Alignment:
Q  80 tgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    ||||||| ||||| |||||| |||||| | |||| ||||| ||||||||||||||||    
T  50092146 tgtcttggtttgtgtaaaatgtcaaaaagcgacagttaaaaaggaacggaggtagta 50092202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 77245 - 77345
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||||||||  |||||||||||||||    
T  77245 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttgatttgtgtaaaatgttaaaatgtgacaattaagaaggaacggaggtagt 77344  T
Q  136 a 136  Q
    |    
T  77345 a 77345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 49303 - 49405
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||||  |||||| ||||||||||||||||||| ||||||||| |||||    
T  49303 taaaagtatagtttattgcatcaaaagtagtatcaattgttgattgtcttggtttgcgtaaaatgtcaaaatgtgacaattaaaaaggaacggatgtagt 49402  T
Q  136 att 138  Q
    |||    
T  49403 att 49405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 89360 - 89430
Alignment:
Q  69 caattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||| | |||||||||    
T  89360 caattgttgattgtcttgatttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacgaatgtagtattt 89430  T

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Target: scaffold0172 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 26211 - 26111
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||| | |||||| ||||||| ||||||||||| | |||| ||||||||    
T  26211 taaaagtatagcttattgcatcaaaagtaatatcaattgttgattgtcttggtttatgtaaaatgtcaaaatatgacaattaaaaacgaacagaggtagt 26112  T
Q  136 a 136  Q
    |    
T  26111 a 26111  T

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Target: scaffold0040 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 69257 - 69357
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||| ||||||||||||||| || ||| ||||||||||||||||| ||||| |||||| |||||||||||||||| || |||||||||||||||    
T  69257 taaaagtatagcttattgcatcaaaaatagtat-aattgttgattgtcttggtttgtgtaaaatgtcaaaatgtgacaattgaaaaggaacggaggtagt 69355  T
Q  136 at 137  Q
    ||    
T  69356 at 69357  T

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Target: scaffold0886 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 4672 - 4770
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||| ||||||||||||||||||||||| || ||||| |||||||||||| ||| | ||||||| | |||||||||||||||| |||||||||||||||    
T  4672 taaaaatataacttattgcatcaaaagtagtaacaattattgattgtcttggtttatgtaaaata-ccaaatgtgacaattaaaaaggaacggaggtagt 4770  T

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Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 148460 - 148560
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||  |||||||||| |||||||| || ||||||||| ||| | |||||| ||||||| | ||||||||| |||||||||||||||    
T  148460 taaaagtataacttattatatcaaaagtagtatcaattttttattgtcttggtttatgtaaaatgtcaaaatataacaattaaaaaggaacggaggtagt 148559  T
Q  136 a 136  Q
    |    
T  148560 a 148560  T

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Target: scaffold0002; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 138795 - 138727
Alignment:
Q  67 atcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||| |||||    
T  138795 atcaattgttgattgtcttggtttgtataaaatgtaaaaatgtgacaattaaaaaggaacggatgtagt 138727  T

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Target: scaffold0831 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 2964 - 3066
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatc-aattgttgattgtcttgatttgtataaaatat-caaaatgtgacaattaaagaggaacggaggta 133  Q
    ||||||||||||||||||||||||||||| || | ||||  ||||||||||| ||||| ||||||||  |||| |||||||||||| ||||||||||| |    
T  2964 taaaagtataacttattgcatcaaaagtagtaacaaattactgattgtcttggtttgtgtaaaatataaaaaaagtgacaattaaaaaggaacggaggga 3063  T
Q  134 gta 136  Q
    |||    
T  3064 gta 3066  T

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Target: scaffold0343 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 7595 - 7681
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| |||||||||| ||  | || |||||||||||||||||| ||||||||||||| |||||||||||| ||||||| ||||||||    
T  7595 attgtatcaaaagtagtaatatttattgattgtcttgatttgtgtaaaatatcaaaaagtgacaattaaaaaggaacgaaggtagta 7681  T

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Target: scaffold0009 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 147197 - 147108
Alignment:
Q  50 attgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtattt 139  Q
    |||| |||||||||| || || || || ||||| ||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||    
T  147197 attgtatcaaaagtagtaacatttattaattgttttgatttgtgtaaaatgtcaaaaagtgacaattaaaaaggaacggaggtagtattt 147108  T

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Target: scaffold0014 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 138
Target Start/End: Complemental strand, 195671 - 195569
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||||  |||||| ||||||  || |||||||||| |||| ||||| ||||| |||||| ||||||||||||||||||| | |||||||  ||||    
T  195671 taaaagtatagtttattgtatcaaacatagtatcaattgtcgattatcttggtttgtgtaaaatgtcaaaatgtgacaattaaaaaagaacggaactagt 195572  T
Q  136 att 138  Q
    |||    
T  195571 att 195569  T

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Target: scaffold0135 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 30734 - 30674
Alignment:
Q  78 attgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtatt 138  Q
    ||||||||| ||||| |||||| |||||| |||||||||||| || |||||||||||||||    
T  30734 attgtcttgttttgtgtaaaatttcaaaaagtgacaattaaaaagaaacggaggtagtatt 30674  T

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Target: scaffold0001 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 419576 - 419476
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagt 135  Q
    ||||||||| | |||||| |||||||||| || || || |||||||||||| ||| | |||||| ||| || |||||||||||| || ||| ||||||||    
T  419576 taaaagtatcaattattgtatcaaaagtagtaacatttattgattgtcttggtttatgtaaaatgtcacaaagtgacaattaaaaagaaacagaggtagt 419477  T
Q  136 a 136  Q
    |    
T  419476 a 419476  T

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Target: scaffold0274 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 284 - 224
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagta 136  Q
    |||| ||||||| |||||||||||||||||||  ||| ||||||| ||||||||||||||||    
T  284 ttgaatgtcttggtttgtataaaatatcaaaa-atgataattaaaaaggaacggaggtagta 224  T

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Target: scaffold2146 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2146
Description:

Target: scaffold2146; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 748 - 810
Alignment:
Q  75 ttgattgtcttgatttgtataaaatatcaaaatgtgacaattaaagaggaacggaggtagtat 137  Q
    |||||||| ||||||| | |||||| | |||| |||| ||||||| |||||||||||||||||    
T  748 ttgattgtattgatttatgtaaaatgttaaaaagtgaaaattaaaaaggaacggaggtagtat 810  T

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Target: scaffold1213 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 51 - 1
Alignment:
Q  36 taaaagtataacttattgcatcaaaagtaatatcaattgttgattgtcttg 86  Q
    |||||||| |||||||||||||||||||| ||  |||| ||||||||||||    
T  51 taaaagtacaacttattgcatcaaaagtagtaataattattgattgtcttg 1  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 14327 - 14239
Alignment:
Q  43 ataacttattgcatcaaaagtaatatcaattgttgattgtcttgatttgtataaaata-tcaaaatgtgacaattaaagaggaacggagg 131  Q
    |||| ||||||||||||||||| ||  |||| ||  |||||||||||| | ||||| | |||||| |||||||||||| |||||||||||    
T  14327 ataaattattgcatcaaaagtagtaaaaattatttgttgtcttgatttctgtaaaagactcaaaa-gtgacaattaaaaaggaacggagg 14239  T

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