View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12475_low_3 (Length: 255)

Name: NF12475_low_3
Description: NF12475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12475_low_3
NF12475_low_3
[»] chr1 (46 HSPs)
chr1 (18-255)||(52442418-52442655)
chr1 (154-255)||(28528510-28528612)
chr1 (132-255)||(51584899-51585023)
chr1 (132-207)||(15437131-15437207)
chr1 (156-255)||(40419794-40419893)
chr1 (132-199)||(28533679-28533746)
chr1 (146-255)||(30445266-30445370)
chr1 (154-255)||(7083045-7083147)
chr1 (132-197)||(43028811-43028876)
chr1 (132-255)||(8796364-8796488)
chr1 (145-255)||(10272413-10272522)
chr1 (132-199)||(1210957-1211024)
chr1 (132-199)||(4590535-4590602)
chr1 (132-199)||(15086134-15086201)
chr1 (132-199)||(22090308-22090375)
chr1 (132-199)||(25979234-25979301)
chr1 (200-255)||(27637703-27637758)
chr1 (132-199)||(29577464-29577531)
chr1 (145-255)||(29808011-29808122)
chr1 (132-199)||(30202133-30202200)
chr1 (132-199)||(49347396-49347463)
chr1 (132-229)||(12261716-12261814)
chr1 (134-172)||(19908040-19908078)
chr1 (145-191)||(48861391-48861437)
chr1 (132-181)||(4029352-4029401)
chr1 (132-181)||(28090697-28090746)
chr1 (134-199)||(30396734-30396799)
chr1 (132-181)||(37462879-37462928)
chr1 (132-181)||(39140745-39140794)
chr1 (132-181)||(41560459-41560508)
chr1 (132-181)||(43481801-43481850)
chr1 (132-181)||(44941779-44941828)
chr1 (132-255)||(50806824-50806946)
chr1 (132-181)||(51440768-51440817)
chr1 (132-181)||(52532619-52532668)
chr1 (132-181)||(52561592-52561641)
chr1 (132-181)||(52921310-52921359)
chr1 (132-172)||(696509-696549)
chr1 (132-172)||(4707224-4707264)
chr1 (135-199)||(13578908-13578972)
chr1 (147-199)||(14225854-14225906)
chr1 (132-172)||(34444595-34444635)
chr1 (132-227)||(37311758-37311854)
chr1 (132-172)||(38758023-38758063)
chr1 (132-172)||(38807674-38807714)
chr1 (132-172)||(52073051-52073091)
[»] chr2 (32 HSPs)
chr2 (132-255)||(5758998-5759122)
chr2 (132-255)||(12489805-12489929)
chr2 (132-255)||(44437724-44437848)
chr2 (132-255)||(28960214-28960338)
chr2 (140-243)||(4598573-4598677)
chr2 (132-255)||(42543390-42543514)
chr2 (140-249)||(12470908-12471018)
chr2 (155-253)||(20129627-20129726)
chr2 (154-199)||(19224993-19225038)
chr2 (132-227)||(3635326-3635422)
chr2 (132-215)||(15025689-15025773)
chr2 (132-199)||(227401-227468)
chr2 (132-199)||(4807807-4807874)
chr2 (132-199)||(12474930-12474997)
chr2 (132-199)||(17670680-17670747)
chr2 (146-197)||(19015953-19016004)
chr2 (132-199)||(28508890-28508957)
chr2 (132-199)||(30306244-30306311)
chr2 (132-182)||(624689-624739)
chr2 (132-253)||(9556372-9556494)
chr2 (132-181)||(9531603-9531652)
chr2 (132-181)||(12520065-12520114)
chr2 (132-181)||(17429280-17429329)
chr2 (132-181)||(25834908-25834957)
chr2 (132-181)||(38328373-38328422)
chr2 (132-181)||(41763046-41763095)
chr2 (132-181)||(43573133-43573182)
chr2 (214-255)||(43832253-43832294)
chr2 (140-215)||(15015140-15015216)
chr2 (132-172)||(35643187-35643227)
chr2 (132-172)||(38452689-38452729)
chr2 (132-172)||(39029826-39029866)
[»] chr8 (21 HSPs)
chr8 (132-255)||(7531647-7531771)
chr8 (140-243)||(30812827-30812931)
chr8 (132-255)||(32043745-32043866)
chr8 (135-255)||(16351533-16351653)
chr8 (132-255)||(39953267-39953391)
chr8 (140-255)||(43733362-43733477)
chr8 (154-255)||(26685944-26686046)
chr8 (132-199)||(18473975-18474042)
chr8 (132-199)||(36545361-36545428)
chr8 (132-254)||(38901822-38901945)
chr8 (132-175)||(42584594-42584637)
chr8 (132-199)||(11523726-11523793)
chr8 (132-199)||(14742085-14742152)
chr8 (132-199)||(32569713-32569780)
chr8 (132-199)||(45419447-45419514)
chr8 (132-181)||(490565-490614)
chr8 (132-181)||(1928590-1928639)
chr8 (132-181)||(25473406-25473455)
chr8 (155-255)||(39967525-39967626)
chr8 (132-181)||(44529455-44529504)
chr8 (132-172)||(1064959-1064999)
[»] chr4 (42 HSPs)
chr4 (132-255)||(31961269-31961393)
chr4 (155-255)||(44360241-44360342)
chr4 (132-255)||(2589227-2589351)
chr4 (145-255)||(10209191-10209300)
chr4 (132-255)||(31897431-31897555)
chr4 (132-242)||(50869883-50869994)
chr4 (132-227)||(13262395-13262491)
chr4 (132-255)||(26024853-26024977)
chr4 (132-255)||(37042667-37042791)
chr4 (132-255)||(42285706-42285830)
chr4 (125-255)||(17900635-17900766)
chr4 (134-253)||(20999157-20999277)
chr4 (145-255)||(8598957-8599068)
chr4 (134-227)||(35555655-35555749)
chr4 (132-227)||(21528471-21528567)
chr4 (132-199)||(31339736-31339803)
chr4 (132-199)||(31959817-31959884)
chr4 (132-183)||(40932927-40932978)
chr4 (132-191)||(44719364-44719423)
chr4 (132-199)||(47372916-47372983)
chr4 (132-199)||(52569518-52569585)
chr4 (132-199)||(56375502-56375569)
chr4 (132-225)||(36556763-36556857)
chr4 (132-182)||(45209208-45209258)
chr4 (132-181)||(436459-436508)
chr4 (132-181)||(1211395-1211444)
chr4 (146-199)||(6958255-6958308)
chr4 (134-199)||(7947149-7947214)
chr4 (132-181)||(30634109-30634158)
chr4 (132-169)||(44940738-44940775)
chr4 (132-181)||(50238618-50238667)
chr4 (132-181)||(50238704-50238753)
chr4 (132-181)||(55007976-55008025)
chr4 (132-215)||(26356954-26357038)
chr4 (132-172)||(28236421-28236461)
chr4 (132-227)||(32479221-32479317)
chr4 (132-172)||(39100539-39100579)
chr4 (132-255)||(42639023-42639147)
chr4 (132-172)||(46153947-46153987)
chr4 (132-172)||(48622546-48622586)
chr4 (133-185)||(49686919-49686971)
chr4 (132-172)||(56130409-56130449)
[»] chr3 (27 HSPs)
chr3 (132-254)||(31454228-31454351)
chr3 (132-255)||(31452964-31453088)
chr3 (154-255)||(37351562-37351664)
chr3 (132-255)||(26990368-26990491)
chr3 (145-255)||(27893244-27893355)
chr3 (132-199)||(31566164-31566231)
chr3 (132-225)||(3987519-3987613)
chr3 (132-223)||(311312-311404)
chr3 (132-227)||(5169015-5169111)
chr3 (132-184)||(34719083-34719135)
chr3 (132-199)||(12096708-12096775)
chr3 (132-199)||(21862744-21862811)
chr3 (132-199)||(47233599-47233666)
chr3 (146-252)||(50631898-50632005)
chr3 (132-199)||(52139012-52139079)
chr3 (132-199)||(53519792-53519859)
chr3 (132-174)||(37083295-37083337)
chr3 (132-181)||(41529991-41530040)
chr3 (169-250)||(45373311-45373392)
chr3 (132-181)||(48508465-48508514)
chr3 (132-172)||(14415263-14415303)
chr3 (147-250)||(29601052-29601156)
chr3 (132-172)||(39512782-39512822)
chr3 (132-172)||(48532197-48532237)
chr3 (132-172)||(48734150-48734190)
chr3 (133-181)||(52927852-52927900)
chr3 (132-172)||(53262380-53262420)
[»] chr7 (42 HSPs)
chr7 (146-255)||(19119441-19119551)
chr7 (132-255)||(34745902-34746026)
chr7 (135-251)||(5336077-5336193)
chr7 (132-199)||(37618157-37618224)
chr7 (132-227)||(48735904-48735999)
chr7 (132-221)||(14593941-14594031)
chr7 (132-221)||(16013464-16013554)
chr7 (145-199)||(17759485-17759539)
chr7 (132-181)||(7273330-7273379)
chr7 (131-199)||(6375080-6375148)
chr7 (132-200)||(31840441-31840509)
chr7 (132-199)||(2885725-2885792)
chr7 (132-199)||(11594172-11594239)
chr7 (132-199)||(12841278-12841345)
chr7 (132-199)||(28208331-28208398)
chr7 (132-199)||(31682605-31682672)
chr7 (132-199)||(39812150-39812217)
chr7 (132-199)||(39906375-39906442)
chr7 (132-199)||(43491520-43491587)
chr7 (140-182)||(6682582-6682624)
chr7 (132-245)||(25578025-25578139)
chr7 (132-186)||(31005430-31005484)
chr7 (145-191)||(35172081-35172127)
chr7 (132-182)||(39738448-39738498)
chr7 (136-182)||(47155179-47155225)
chr7 (132-181)||(6263489-6263538)
chr7 (132-181)||(20525055-20525104)
chr7 (132-181)||(22349850-22349899)
chr7 (132-181)||(27649010-27649059)
chr7 (132-181)||(29650614-29650663)
chr7 (132-181)||(31869105-31869154)
chr7 (132-169)||(35734694-35734731)
chr7 (132-181)||(40979931-40979980)
chr7 (132-169)||(41157897-41157934)
chr7 (132-172)||(1011285-1011325)
chr7 (132-172)||(21244286-21244326)
chr7 (215-255)||(30914589-30914629)
chr7 (132-172)||(32631803-32631843)
chr7 (132-252)||(38921089-38921212)
chr7 (132-227)||(43281857-43281953)
chr7 (132-172)||(44855177-44855217)
chr7 (132-172)||(47652786-47652826)
[»] chr5 (37 HSPs)
chr5 (132-239)||(3442874-3442982)
chr5 (145-254)||(37065632-37065743)
chr5 (132-245)||(33667600-33667714)
chr5 (136-199)||(15252751-15252814)
chr5 (132-227)||(11002424-11002520)
chr5 (132-243)||(28411843-28411955)
chr5 (134-255)||(2713099-2713213)
chr5 (132-199)||(20456985-20457052)
chr5 (132-199)||(28976862-28976929)
chr5 (132-181)||(2075476-2075525)
chr5 (132-255)||(10082748-10082872)
chr5 (132-199)||(12492387-12492454)
chr5 (132-199)||(13561389-13561456)
chr5 (132-199)||(29816594-29816661)
chr5 (140-199)||(38685179-38685238)
chr5 (145-199)||(683717-683771)
chr5 (145-199)||(1275476-1275530)
chr5 (162-255)||(1525799-1525893)
chr5 (174-255)||(1935277-1935359)
chr5 (154-252)||(16133997-16134095)
chr5 (132-186)||(39040981-39041035)
chr5 (132-181)||(408497-408546)
chr5 (132-181)||(3302074-3302123)
chr5 (132-181)||(4496614-4496663)
chr5 (135-184)||(9121084-9121133)
chr5 (132-181)||(9234116-9234165)
chr5 (132-181)||(18855837-18855886)
chr5 (132-181)||(26884692-26884741)
chr5 (134-199)||(30213787-30213852)
chr5 (132-173)||(34119858-34119899)
chr5 (132-172)||(3000978-3001018)
chr5 (132-172)||(5860073-5860113)
chr5 (132-196)||(7678692-7678756)
chr5 (132-172)||(14665951-14665991)
chr5 (215-255)||(14749462-14749502)
chr5 (192-255)||(21952510-21952574)
chr5 (188-255)||(31635979-31636047)
[»] chr6 (11 HSPs)
chr6 (148-255)||(10617253-10617361)
chr6 (132-243)||(9706937-9707049)
chr6 (132-199)||(28085588-28085655)
chr6 (132-171)||(5258151-5258190)
chr6 (134-243)||(7513394-7513504)
chr6 (134-199)||(4245877-4245942)
chr6 (132-181)||(12890805-12890854)
chr6 (132-181)||(34934833-34934882)
chr6 (132-227)||(608344-608440)
chr6 (132-172)||(30643008-30643048)
chr6 (132-172)||(33730204-33730244)
[»] scaffold0022 (1 HSPs)
scaffold0022 (132-231)||(99289-99390)
[»] scaffold1318 (1 HSPs)
scaffold1318 (132-199)||(543-610)
[»] scaffold0168 (1 HSPs)
scaffold0168 (132-199)||(28892-28959)
[»] scaffold0018 (1 HSPs)
scaffold0018 (132-199)||(31680-31747)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 52442418 - 52442655
Alignment:
Q  18 acagacaaagtgtacagacaacctaaggttgcaataacaaacgtgcaaatttatgagcaagaggcttggtattatcagtatgagcctttaaatcttcaac 117  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52442418 acagacaaagtttacagacaacctaaggttgcaataacaaatgtgcaaatttatgagcaagaggcttggtattatcagtatgagcctttaaatcttcaac 52442517  T
Q  118 aagtcttaaaattgacaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttctacaaaaactatgtctttat 217  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52442518 aagtcttaaaatcgacaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacggcatcatattgttctacaaaaactatgtctttat 52442617  T
Q  218 ccaactcattaacatctagatccttcttgatagtttct 255  Q
    ||||||||||||||||||||||||||||||||||||||    
T  52442618 ccaactcattaacatctagatccttcttgatagtttct 52442655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 28528612 - 28528510
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 252  Q
    ||||||||||||||||||| ||||||||||||  |||| || |||| ||||||| |||||||| |||||||||||||  |||||||||||||| ||||||    
T  28528612 ctaagtggggtcggctacatgaatcaaacgacgccatagtggtctatcaaaaaccatgtctttctccaactcattaatctctagatccttcttaatagtt 28528513  T
Q  253 tct 255  Q
    |||    
T  28528512 tct 28528510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 51585023 - 51584899
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||  |||||||||||| |||||| ||||||||| |  ||||| ||||||| ||||||| |||||||| |||| ||||||||     
T  51585023 acaacaaccaagccttatcctactaagtggggtctgctacatgaatcaaacaatgtcatagtgttctatcaaaaacaatgtctttctccagctcattaat 51584924  T
Q  231 atctagatccttcttgatagtttct 255  Q
     || |||||| |||| |||||||||    
T  51584923 gtccagatccctcttaatagtttct 51584899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 15437131 - 15437207
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaact 207  Q
    ||||||| |||| |||||||| ||| ||||||| ||||||| ||||||||||||| |||| ||||||| ||||||||    
T  15437131 acaacaaccaagccttatcccactatgtggggttggctacatgaatcaaacgacaccatagtgttctatcaaaaact 15437207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 40419893 - 40419794
Alignment:
Q  156 aagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttc 254  Q
    ||||||||||||||||| |||| |||||||  |||| || |||| ||||||| |||||||| ||||||||||| |  |||||||||||| | ||||||||    
T  40419893 aagtggggtcggctacatgaat-aaacgacgccatagtgatctatcaaaaaccatgtctttctccaactcatttatctctagatccttcataatagtttc 40419795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 28533746 - 28533679
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| ||| ||||| |||||||    
T  28533746 acaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttcta 28533679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 30445370 - 30445266
Alignment:
Q  146 ttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttct 244  Q
    ||||||| |||||||| || ||||||| |||||||||||| ||||  ||||||| ||||||| ||      ||||||||||||||  ||||||||| |||    
T  30445370 ttatcccactaagtggagttggctacatgaatcaaacgacgtcatggtgttctatcaaaaaccat------atccaactcattaatctctagatccctct 30445277  T
Q  245 tgatagtttct 255  Q
    |||||||||||    
T  30445276 tgatagtttct 30445266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 7083147 - 7083045
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 252  Q
    ||||| |||||| |||||| ||||||||||||  |||| ||||||| || || | |||||||| |||||||||||||  ||||| ||| |||| ||||||    
T  7083147 ctaagcggggtcagctacatgaatcaaacgacgccatagtgttctatcataaccgatgtctttctccaactcattaatctctagttccatcttaatagtt 7083048  T
Q  253 tct 255  Q
    |||    
T  7083047 tct 7083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 43028811 - 43028876
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttc 197  Q
    ||||||| |||| |||||||| |||||||||||||  |||| ||||||||||||| |||| |||||    
T  43028811 acaacaaccaagccttatcccactaagtggggtcgcttacatgaatcaaacgacaccatagtgttc 43028876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 8796488 - 8796364
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | || |||  ||  |||| ||||||| || |||| || | |  |||||| |||||||     
T  8796488 acaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcattaat 8796389  T
Q  231 atctagatccttcttgatagtttct 255  Q
    ||||||||| ||||| |||||||||    
T  8796388 atctagatctttcttaatagtttct 8796364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 10272522 - 10272413
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttc 243  Q
    ||||| || ||||||||||||||||||| ||||||||||||| |    ||||||| ||||||| | || ||| ||| ||| |||||  ||||||||||||    
T  10272522 cttattccactaagtggggtcggctacatgaatcaaacgacacc--ggtgttctatcaaaaaccaggtgtttctcctacttattaatttctagatccttc 10272425  T
Q  244 ttgatagtttct 255  Q
    || |||||||||    
T  10272424 ttaatagtttct 10272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 1211024 - 1210957
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  1211024 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 1210957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 4590535 - 4590602
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||  |||||||| ||||||||||||||||||| | ||||||  ||| ||||||||||||    
T  4590535 acaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacaccatattgttcta 4590602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 15086201 - 15086134
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||| ||||||| | |||||| ||| ||||| |||||||    
T  15086201 acaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgtcatagtgttcta 15086134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 22090375 - 22090308
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| || |||||||||||||||| | |||||| ||| ||||| |||||||    
T  22090375 acaacaaccaagccttatcccacttagtggggtcggctacatggatcaaatgacgtcatagtgttcta 22090308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 25979234 - 25979301
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  25979234 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 25979301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 27637703 - 27637758
Alignment:
Q  200 caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    ||||||| |||||||| ||||||||||| |   |||||||||||||||||||||||    
T  27637703 caaaaaccatgtctttctccaactcattgatcactagatccttcttgatagtttct 27637758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29577531 - 29577464
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  29577531 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 29577464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 29808122 - 29808011
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttc 243  Q
    |||||||| ||||||||  ||||||||| |||||||| | |  |||| |||| || ||||||| || | ||||| |||||| |||| || ||||||||||    
T  29808122 cttatcccactaagtggaatcggctacatgaatcaaatgtcgccatagtgttttatcaaaaaccatatttttattcaactcgttaatatttagatccttc 29808023  T
Q  244 ttgatagtttct 255  Q
    ||||| ||||||    
T  29808022 ttgatcgtttct 29808011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 30202133 - 30202200
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  30202133 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 30202200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 49347396 - 49347463
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  49347396 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 49347463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 12261716 - 12261814
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaa 229  Q
    |||||||||||| ||  || || | |||||||||  ||||| |||||||||||||||| |  |||||| ||||||| |||||||| ||||||| |||||    
T  12261716 acaacaatcaagcctactcgcgattagtggggtcatctacatgaatcaaacgacatcacagcgttctatcaaaaaccatgtctttctccaactaattaa 12261814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 19908040 - 19908078
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19908040 aacaatcaagccttatcccactaagtggggtcggctaca 19908078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 48861391 - 48861437
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcata 191  Q
    |||||||| ||||||||||||||| ||| |||||||||||| |||||    
T  48861391 cttatcccactaagtggggtcggcgacatgaatcaaacgacgtcata 48861437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 4029401 - 4029352
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  4029401 acaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaa 4029352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 28090697 - 28090746
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  28090697 acaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaa 28090746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 30396734 - 30396799
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||| |||| |||||||| ||||||||||| ||||||| | |||||||| || |||| |||||||    
T  30396734 aacaaccaagccttatcccactaagtggggttggctacacggatcaaacgccaccataatgttcta 30396799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 37462879 - 37462928
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  37462879 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 37462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 39140794 - 39140745
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| ||||  ||||||| ||||||||||||||||||| ||||||||    
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaa 39140745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 41560508 - 41560459
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  41560508 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 41560459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 43481801 - 43481850
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  43481801 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 43481850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 44941779 - 44941828
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  44941779 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 44941828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 50806946 - 50806824
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| ||||| || |||| ||||||||| |||| ||||||||| ||  |||| |||| || || |||| || | |||||||||| ||||||     
T  50806946 acaacaaccaagccttattccactaaatggggtcggttacatgaatcaaacaacgccatagtgttttatcataaaccatatttttatccaacgcattaat 50806847  T
Q  231 atctagatccttcttgatagtttct 255  Q
     ||||  ||||||||||||||||||    
T  50806846 ctcta--tccttcttgatagtttct 50806824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 51440768 - 51440817
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| |||||||||||||| |||| ||||||||    
T  51440768 acaacaaccaagtcttatcccactaagtggggtcggttacatgaatcaaa 51440817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 52532619 - 52532668
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| ||| |||| ||||||||||||||||||| ||||||||    
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaa 52532668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 52561592 - 52561641
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  52561592 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52561641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 52921359 - 52921310
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  52921359 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52921310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 696549 - 696509
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  696549 acaacaaccaagccttatcccactaagtggggtcggctaca 696509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 4707224 - 4707264
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  4707224 acaacaaccaagccttatcccactaagtggggtcggctaca 4707264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 13578908 - 13578972
Alignment:
Q  135 acaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||||  |||| || |||||||| |||||||| | |||||||||||| ||||| |||||||    
T  13578908 acaatcaagtgttattccactaagtggagtcggctatatgaatcaaacgacgtcatagtgttcta 13578972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 14225854 - 14225906
Alignment:
Q  147 tatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||| |||||||||| |||||||| | ||||||||||| |||| |||||||    
T  14225854 tatcccactaagtggggccggctacatggatcaaacgacaccatactgttcta 14225906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 34444635 - 34444595
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  34444635 acaacaaccaagccttatcccactaagtggggtcggctaca 34444595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 37311758 - 37311854
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| ||| |||| ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || | |  ||||||||||||    
T  37311758 acaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 37311854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 38758023 - 38758063
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  38758023 acaacaaccaagccttatcccactaagtggggtcggctaca 38758063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 38807674 - 38807714
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  38807674 acaacaaccaagccttatcccactaagtggggtcggctaca 38807714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 52073051 - 52073091
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    |||||||||||| |||||||| | |||||||||||||||||    
T  52073051 acaacaatcaagccttatcccaccaagtggggtcggctaca 52073091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 7e-24; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 5758998 - 5759122
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||  |||||||||||| |||||  ||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||||| |     
T  5758998 acaacaaccaagccttatccaactaagtggggtcagctacctgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcattgat 5759097  T
Q  231 atctagatccttcttgatagtttct 255  Q
     ||||||||||||||| ||||||||    
T  5759098 ctctagatccttcttggtagtttct 5759122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 12489805 - 12489929
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||||||  || | |||| || ||||||| |||||||| ||||||||||| |     
T  12489805 acaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacgacgccaaagtgttatatcaaaaaccatgtctttctccaactcatttat 12489904  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  12489905 ctctagatccttcctaatagtttct 12489929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 44437724 - 44437848
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| |||| |||| ||  |||| ||||||| ||||||| |||| ||| ||||||||||| |     
T  44437724 acaacaaccaagccttatcccactaagtggggtcggctacatgaattaaacaacgccatagtgttctatcaaaaaccatgtttttctccaactcatttat 44437823  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||||| |||||||||    
T  44437824 ctctagatccttcttaatagtttct 44437848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 28960214 - 28960338
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| |||| ||| |||| ||||| ||||||||||||| |||| || |||| ||||||| || ||||| ||||||||||| |     
T  28960214 acaacaaccaagccttatcccactaaatggagtcgactacatgaatcaaacgacaccatagtgctctatcaaaaaccatatctttctccaactcatttat 28960313  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||||| | |||||||    
T  28960314 ctctagatccttcttaacagtttct 28960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 4598573 - 4598677
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagat 238  Q
    |||| |||||||||||||||||  |||| |||| |||||||| |||  |||| ||||||| ||||| |||||||||| ||||||||||| |  |||||||    
T  4598573 caagccttatcccgctaagtggaatcggttacatgaatcaaatgacgccatagtgttctatcaaaatctatgtctttctccaactcatttatctctagat 4598672  T
Q  239 ccttc 243  Q
    |||||    
T  4598673 ccttc 4598677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 42543514 - 42543390
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| |||||||||| |||||||| ||||||||| ||  ||||  |||||| ||||||  | |||||| ||||||||||| |     
T  42543514 acaacaaccaagccttatcccactaagtggggccggctacatgaatcaaacaacgccatagcgttctatcaaaaagcacgtctttctccaactcatttat 42543415  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  42543414 ctctagatccttcctaatagtttct 42543390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 12470908 - 12471018
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagat 238  Q
    |||| |||||||| |||| |||||||||||||| ||| ||||||||  |||| || | || ||||||| |||||||| ||||||||||| |  |||||||    
T  12470908 caagccttatcccactaaatggggtcggctacatgaagcaaacgacgccatagtgatatatcaaaaaccatgtctttctccaactcatttatctctagat 12471007  T
Q  239 ccttcttgata 249  Q
    ||||| |||||    
T  12471008 ccttcatgata 12471018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 253
Target Start/End: Original strand, 20129627 - 20129726
Alignment:
Q  155 taagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagttt 253  Q
    ||||| |||||||||||| |||||||||||| ||||| |||| ||  || ||| |||| ||| ||||| |||||||  ||||||| ||||||||||||||    
T  20129627 taagtcgggtcggctacatgaatcaaacgacgtcatagtgttatattaacaaccatgtatttctccaattcattaatctctagattcttcttgatagttt 20129726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 19225038 - 19224993
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||||||||||||||| | |||||||||||||||| |||||||    
T  19225038 ctaagtggggtcggctacatggatcaaacgacatcatagtgttcta 19224993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 3635326 - 3635422
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || | |  ||||||||||||    
T  3635326 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 15025773 - 15025689
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtcttt 215  Q
    ||||||| |||| |||||||| |||||| |  ||||||||| |||||||||||   |||| ||||||| ||||||||||||||||    
T  15025773 acaacaaccaagccttatcccactaagttgcatcggctacatgaatcaaacgatgccatagtgttctatcaaaaactatgtcttt 15025689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 227468 - 227401
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  227468 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 227401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 4807874 - 4807807
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  4807874 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 4807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 12474930 - 12474997
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  12474930 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 12474997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 17670747 - 17670680
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  17670747 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 17670680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 19016004 - 19015953
Alignment:
Q  146 ttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttc 197  Q
    ||||||||||||||| ||||||||||| | |||||||||  |||||||||||    
T  19016004 ttatcccgctaagtgaggtcggctacatggatcaaacgatgtcatattgttc 19015953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 28508957 - 28508890
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  28508957 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 28508890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 30306311 - 30306244
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  30306311 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 30306244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 624689 - 624739
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaac 182  Q
    ||||||| |||| |||||||| ||||| ||||||||||||| |||||||||    
T  624689 acaacaaccaagccttatcccactaagcggggtcggctacatgaatcaaac 624739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 253
Target Start/End: Original strand, 9556372 - 9556494
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| || ||||| |||||||| |||||||||| | ||||||  ||| | || ||||||| || |||| || |||| ||||||||||||||     
T  9556372 acaacaaccaagcctcatcccactaagtggagtcggctacatgtatcaaattacaccctaatgttctatcataaaccatatcttgatccaactcattaat 9556471  T
Q  231 atctagatccttcttgatagttt 253  Q
      ||||||| ||||| |||||||    
T  9556472 cactagatctttcttaatagttt 9556494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 9531603 - 9531652
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  9531603 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 9531652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 12520065 - 12520114
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  12520065 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 12520114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 17429329 - 17429280
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||| | ||||||||||||||||||| ||||||||    
T  17429329 acaacaaccaagccttatctcactaagtggggtcggctacatgaatcaaa 17429280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 25834957 - 25834908
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  25834957 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 25834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 38328373 - 38328422
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  38328373 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 38328422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 41763046 - 41763095
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  41763046 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 41763095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 43573133 - 43573182
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  43573133 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 43573182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 255
Target Start/End: Complemental strand, 43832294 - 43832253
Alignment:
Q  214 ttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    ||||||||||||||||  |||||||||||||| |||||||||    
T  43832294 ttatccaactcattaatctctagatccttcttaatagtttct 43832253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 15015216 - 15015140
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtcttt 215  Q
    |||| |||||||| |||||| | |||||||||| ||||||||||| | || | ||||||| ||||||||| ||||||    
T  15015216 caagccttatcccactaagttgcgtcggctacatgaatcaaacgaaaccagagtgttctatcaaaaactacgtcttt 15015140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 35643227 - 35643187
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  35643227 acaacaaccaagccttatcccactaagtggggtcggctaca 35643187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 38452689 - 38452729
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  38452689 acaacaaccaagccttatcccactaagtggggtcggctaca 38452729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 39029866 - 39029826
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  39029866 acaacaaccaagccttatcccactaagtggggtcggctaca 39029826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 7531647 - 7531771
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||  ||||||| | ||||||||| ||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||||| |     
T  7531647 acaacaaccaagccttatcctactaagtgagttcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttctccaactcatttat 7531746  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  7531747 ctctagatccttcctaatagtttct 7531771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 30812827 - 30812931
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagat 238  Q
    |||| ||| |||| ||||||||||||||||||| ||||||||||||| |||| ||||||| ||||||| |||||||| ||||||||||| |  |||||||    
T  30812827 caagccttttcccactaagtggggtcggctacatgaatcaaacgacaccatagtgttctatcaaaaaccatgtctttttccaactcatttatctctagat 30812926  T
Q  239 ccttc 243  Q
    |||||    
T  30812927 ccttc 30812931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 32043866 - 32043745
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    |||||||||||| |||||||| |||||||||||| | |||| |||||||||| |  |||| ||||||| ||||||| |||||||| ||||||||||| |     
T  32043866 acaacaatcaagccttatcccactaagtggggtcag-tacatgaatcaaacggc--catagtgttctatcaaaaaccatgtctttctccaactcattgat 32043770  T
Q  231 atctagatccttcttgatagtttct 255  Q
     | ||||||||||||||||||||||    
T  32043769 ctttagatccttcttgatagtttct 32043745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 16351653 - 16351533
Alignment:
Q  135 acaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatc 233  Q
    |||| |||| ||||| || ||||||||||||| ||||| |||||||||||   |||| |||||||  |||||| |||||||| | |||||||||||  ||    
T  16351653 acaaccaagccttattccactaagtggggtcgtctacatgaatcaaacgatgccatagtgttctattaaaaaccatgtctttct-caactcattaatctc 16351555  T
Q  234 tagatccttcttgatagtttct 255  Q
    |||||||||||| |||||||||    
T  16351554 tagatccttcttaatagtttct 16351533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 39953267 - 39953391
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||| ||  |||| ||| | | ||||||| |||| ||| || |||||||| |     
T  39953267 acaacaaccaagtcttatcccactaagtggggtcggctacatgaatcaaacaactccatagtgtcccatcaaaaaccatgtttttctctaactcatttat 39953366  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  39953367 ctctagatccttcctaatagtttct 39953391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 43733477 - 43733362
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagat 238  Q
    |||| |||||||| ||||||||| ||||||||| |||| |||||||  |||| ||||||| | ||||| |  | |||||||||||||||||  |||||||    
T  43733477 caagccttatcccactaagtgggatcggctacatgaatgaaacgacgccatagtgttctatccaaaac-acatttttatccaactcattaatctctagat 43733379  T
Q  239 ccttcttgatagtttct 255  Q
    |||||| ||||||||||    
T  43733378 ccttctcgatagtttct 43733362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 255
Target Start/End: Original strand, 26685944 - 26686046
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 252  Q
    ||||||||||| ||||||| |||||||||| || |||| ||||||| ||||||| |||||||| |||||||||| ||  ||||| |||| ||| | ||||    
T  26685944 ctaagtggggttggctacatgaatcaaacggcaccatagtgttctatcaaaaaccatgtctttctccaactcatcaatctctaggtcctacttaacagtt 26686043  T
Q  253 tct 255  Q
    |||    
T  26686044 tct 26686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 18473975 - 18474042
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| |||||||| |||||||||| |||||||||||  ||||| |||||||    
T  18473975 acaacaaccaagtcttatcccactaagtggtgtcggctacatgaatcaaacgaagtcataatgttcta 18474042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 36545428 - 36545361
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| ||| ||||| |||||||    
T  36545428 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttcta 36545361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 38901822 - 38901945
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    |||||||||||| |||||||| |||  ||||||| |||||| |||||||| | |  |||| |||| || ||||||| |||||||| ||||| |||||||     
T  38901822 acaacaatcaagccttatcccactatatggggtccgctacatgaatcaaatgccgccatagtgttatatcaaaaaccatgtctttctccaaatcattaat 38901921  T
Q  231 atctagatccttcttgatagtttc 254  Q
     ||||||| |||| | ||||||||    
T  38901922 ctctagattcttcctaatagtttc 38901945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 42584637 - 42584594
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaaga 175  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  42584637 acaacaatcaagtcttatcccactaagtggggtcggctacaaga 42584594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 11523726 - 11523793
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  11523726 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 11523793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 14742085 - 14742152
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  14742085 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 14742152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 32569713 - 32569780
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| |||| ||||||||||||||  ||||||| ||| ||||| |||||||    
T  32569713 acaacaaccaagtcttatcccactaaatggggtcggctacataaatcaaatgacgtcatagtgttcta 32569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 45419514 - 45419447
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||  ||| |||| |||||||    
T  45419514 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttcta 45419447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 490614 - 490565
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  490614 acaacaaacaagccttatcccactaagtggggtcggctacatggatcaaa 490565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 1928590 - 1928639
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  1928590 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 1928639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 25473406 - 25473455
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  25473406 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 25473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 255
Target Start/End: Original strand, 39967525 - 39967626
Alignment:
Q  155 taagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagttt 253  Q
    |||||||| ||||||||| | ||||||| ||  |||| ||||||| || ||||||| |||  ||||||||||||||   ||||||| ||||| |||||||    
T  39967525 taagtgggatcggctacatggatcaaactacgccataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagttt 39967624  T
Q  254 ct 255  Q
    ||    
T  39967625 ct 39967626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 44529504 - 44529455
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  44529504 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 44529455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 1064999 - 1064959
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  1064999 acaacaaccaagccttatcccactaagtggggtcggctaca 1064959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 31961269 - 31961393
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| |||||||||||| ||||| ||||||| ||| ||| |||||||| ||||||||||| |     
T  31961269 acaacaaccaagccttatcccactaagtgaggtcggctacatgaatcaaacgacgtcatagtgttctatcaacaaccatgtctttctccaactcatttat 31961368  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||| ||| | |||||||||    
T  31961369 ctctagatctttcctaatagtttct 31961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 155 - 255
Target Start/End: Complemental strand, 44360342 - 44360241
Alignment:
Q  155 taagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagttt 253  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||| |||||||  ||||||| |||||||||||  | || ||||||||||||| |||||    
T  44360342 taagtggggtcggctacatgaatcaaacgacgtcatagtgttctatcaaaaaccgtgtctttctccaactcattggcctcaagatccttcttgacagttt 44360243  T
Q  254 ct 255  Q
    ||    
T  44360242 ct 44360241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 2589351 - 2589227
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| |||| ||||||  |||||| ||||||||||||  |||| ||||||| ||||||| || | || ||||||||||||||     
T  2589351 acaacaaccaagccttatcccactaactggggttagctacatgaatcaaacgacgccatagtgttctatcaaaaaccatattttcatccaactcattaat 2589252  T
Q  231 atctagatccttcttgatagtttct 255  Q
     ||||||||| ||||||||||||||    
T  2589251 ctctagatccatcttgatagtttct 2589227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 10209300 - 10209191
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttc 243  Q
    |||||||| ||||||||||||||||||  ||||||||||||  ||   ||||||| ||||||| |||||||| |||||||||||||  ||||||||||||    
T  10209300 cttatcccactaagtggggtcggctacttgaatcaaacgacgccag--tgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttc 10209203  T
Q  244 ttgatagtttct 255  Q
    || |||||||||    
T  10209202 ttaatagtttct 10209191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 31897431 - 31897555
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| | || |||||||| ||||||| ||| ||||||| |||||||||| | ||||| ||||||| ||| ||| |||||||| ||||||||||| |     
T  31897431 acaacaaccgagccttatcccactaagtgaggttggctacatgaatcaaacggcgtcatagtgttctatcaacaaccatgtctttctccaactcatttat 31897530  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  31897531 ctctagatccttcctaatagtttct 31897555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 242
Target Start/End: Original strand, 50869883 - 50869994
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| |||||||||||| ||| || ||||||||||||  |||| ||||||| ||||||| |||||||| || |||||||| |     
T  50869883 acaacaaccaagccttatcccactaagtggggtcagctgcatgaatcaaacgacgccatagtgttctaccaaaaaccatgtctttctctaactcatttat 50869982  T
Q  231 atctagatcctt 242  Q
     |||||||||||    
T  50869983 ctctagatcctt 50869994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 13262491 - 13262395
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    |||||||  ||| |||||| | |||||||| |||||||||| |||||||||||| ||||| | ||||| ||||||| |||||||| |||||||||||    
T  13262491 acaacaactaagccttatcacactaagtggagtcggctacatgaatcaaacgacgtcatagttttctatcaaaaaccatgtctttctccaactcatt 13262395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 26024853 - 26024977
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| | || |||  ||| |||| ||||||| || |||| ||||||  ||||||||||||||     
T  26024853 acaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaat 26024952  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||| ||||| |||||||||    
T  26024953 ctctagatctttcttaatagtttct 26024977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 37042667 - 37042791
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| |||||| |||||||||||| | ||||||||||| |||| ||||||| |||| ||  | | | ||||||||||| |||     
T  37042667 acaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataat 37042766  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||| ||||| |||||||||    
T  37042767 ctctagatctttcttaatagtttct 37042791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 42285706 - 42285830
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||  ||||||||||| ||||||| ||||||||| |   |||| | ||||| ||||||| |||||||| ||||||||||| |     
T  42285706 acaacaaccaagtcttatccaactaagtggggttggctacatgaatcaaacaatgccatagtattctatcaaaaaccatgtctttctccaactcatttat 42285805  T
Q  231 atctagatccttcttgatagtttct 255  Q
     |||||||||||| | |||||||||    
T  42285806 ctctagatccttcctaatagtttct 42285830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 17900766 - 17900635
Alignment:
Q  125 aaaattgacaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaact 223  Q
    |||||| |||||||||||| |||||||| |||||||||||| |||| | ||||||||| ||  |||| || ||||  |||||| |||||||| | |||||    
T  17900766 aaaattaacaacaatcaagccttatcccactaagtggggtcagctaaatgaatcaaacaacgccatagtgctctattaaaaaccatgtctttctacaact 17900667  T
Q  224 cattaacatctagatccttcttgatagtttct 255  Q
    |||| |  |||| ||| ||| |||||||||||    
T  17900666 catttatctctatatctttcctgatagtttct 17900635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 253
Target Start/End: Complemental strand, 20999277 - 20999157
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacat 232  Q
    ||||||||||  ||||||| || |||||||||||||||||| |||||||||| ||||| || |||| || |  | || | ||||| |||||||||||  |    
T  20999277 aacaatcaagctttatcccactgagtggggtcggctacaaggatcaaacgacgtcataatgctctaccatatgccatatatttattcaactcattaaact 20999178  T
Q  233 ctagatccttcttgatagttt 253  Q
    ||||||| ||||| |||||||    
T  20999177 ctagatctttcttaatagttt 20999157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 8598957 - 8599068
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttc 243  Q
    |||||||| |||||||| |||||||||| ||||||||||||  |||| ||||||| |||| ||  | | | | || ||||||||||||| |||||| |||    
T  8598957 cttatcccactaagtggcgtcggctacatgaatcaaacgacgccataatgttctatcaaataccttatttctttctaactcattaacatttagatctttc 8599056  T
Q  244 ttgatagtttct 255  Q
    || |||||||||    
T  8599057 ttaatagtttct 8599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 35555655 - 35555749
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||| |||| ||| |||| |||| ||| |||||||||| ||||||||||||  |||| ||| ||| ||||||| |||||||| |||||||||||    
T  35555655 aacaaccaagccttgtcccactaaatggagtcggctacatgaatcaaacgacgccatactgtactatcaaaaaccatgtctttctccaactcatt 35555749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 21528567 - 21528471
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| | || |||| ||||||| ||||||| || | |  ||||||||||||    
T  21528567 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcatt 21528471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 31339803 - 31339736
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| |||||||||||||| |||| | | |||||||| ||||| |||||||    
T  31339803 acaacaagcaagccttatcccactaagtggggtcggatacatggaccaaacgacgtcataatgttcta 31339736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 31959817 - 31959884
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  31959817 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 31959884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 40932927 - 40932978
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacg 183  Q
    |||||||||||| |||||||| | ||||||||||||||||| | ||||||||    
T  40932927 acaacaatcaagccttatcccaccaagtggggtcggctacatgcatcaaacg 40932978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 44719364 - 44719423
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcata 191  Q
    ||||||| |||| |||||||| |||||| |||||||||||| | ||||||||||| ||||    
T  44719364 acaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaacgacaccata 44719423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 47372983 - 47372916
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||||||| |||||||| |||||| |||||||||||| | |||| ||||  ||||| |||||||    
T  47372983 acaacaatcaagccttatcccactaagtagggtcggctacatggatcagacgatgtcataatgttcta 47372916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 52569518 - 52569585
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  52569518 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 52569585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 56375569 - 56375502
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| | |||||| ||| ||||| |||||||    
T  56375569 acaacaaccaagtcttatcccactaagtgaggtcggctacatggatcaaatgacgtcatagtgttcta 56375502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 225
Target Start/End: Original strand, 36556763 - 36556857
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactca 225  Q
    ||||||| |||| |||||||| | |||||||||||| |||| ||||||||| ||  |||| ||| ||| ||||||| ||| |||| |||||||||    
T  36556763 acaacaaccaagtcttatcccacaaagtggggtcgggtacacgaatcaaacaacgccatagtgtcctatcaaaaaccatgcctttctccaactca 36556857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 45209208 - 45209258
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaac 182  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||||    
T  45209208 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaac 45209258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 436508 - 436459
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  436508 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 1211395 - 1211444
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| ||||||||  |||||||||||||||||| ||||||||    
T  1211395 acaacaaccaagtcttatcccattaagtggggtcggctacatgaatcaaa 1211444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 6958255 - 6958308
Alignment:
Q  146 ttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||||| |||||||||||| ||||||||||||  |||| |||||||    
T  6958255 ttatcccactaagtagggtcggctacatgaatcaaacgacgccatagtgttcta 6958308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 7947214 - 7947149
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||| |||| |||||||| ||||||||||||||||||| | ||||||  |||| ||| |||||||    
T  7947214 aacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacatgatagtgttcta 7947149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 30634109 - 30634158
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  30634109 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 30634158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 44940775 - 44940738
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggct 169  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  44940775 acaacaaccaagacttatcccactaagtggggtcggct 44940738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 50238618 - 50238667
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  50238618 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 50238667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 50238704 - 50238753
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  50238704 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 50238753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 55008025 - 55007976
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  55008025 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 55007976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 215
Target Start/End: Complemental strand, 26357038 - 26356954
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttc-tacaaaaactatgtcttt 215  Q
    ||||||| |||| |||||||| ||||||||||  |  |||| ||||||||||||| |||| ||||| | ||||||| ||||||||    
T  26357038 acaacaaccaagccttatcccactaagtggggctgattacatgaatcaaacgacaacatagtgttctttcaaaaaccatgtcttt 26356954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 28236461 - 28236421
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  28236461 acaacaaccaagtcttatcccactaagtggggtcggctaca 28236421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 32479317 - 32479221
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| ||| | || ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || | || ||||||||||||    
T  32479317 acaacaaccaagcctttttccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcatt 32479221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 39100539 - 39100579
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  39100539 acaacaaccaagccttatcccactaagtggggtcggctaca 39100579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 42639023 - 42639147
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| || | |||||||| ||||| ||||| ||||||| |||| | |||||  |||| ||||||| |||| || || | | |||||||||||||||     
T  42639023 acaacaagcatgccttatcccactaagcggggttggctacatgaattacacgacgccataatgttctatcaaataccatatttctatccaactcattaat 42639122  T
Q  231 atctagatccttcttgatagtttct 255  Q
      ||||||| ||||| |||||||||    
T  42639123 cgctagatctttcttaatagtttct 42639147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 46153987 - 46153947
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  46153987 acaacaaccaagccttatcccactaagtggggtcggctaca 46153947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 48622546 - 48622586
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  48622546 acaacaaccaagccttatcccactaagtggggtcggctaca 48622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 49686971 - 49686919
Alignment:
Q  133 caacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgac 185  Q
    |||||| |||| |||||||| ||||||||||||||||||| |  |||||||||    
T  49686971 caacaaccaagtcttatcccactaagtggggtcggctacatggttcaaacgac 49686919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 56130449 - 56130409
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  56130449 acaacaaccaagccttatcccactaagtggggtcggctaca 56130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 254
Target Start/End: Original strand, 31454228 - 31454351
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||| | |||||||| |||  |||| ||||||| ||||||| |||||||| ||||| |||||||     
T  31454228 acaacaaccaagccttatcccactaagtggggtcggctaaatgaatcaaatgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaat 31454327  T
Q  231 atctagatccttcttgatagtttc 254  Q
    |||||||||||  || ||||||||    
T  31454328 atctagatcctaattaatagtttc 31454351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 31452964 - 31453088
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| ||||| || |||||||||||| |||||| ||||||||||||  |||| | || |  ||||||| ||||||||  |||| |||||||     
T  31452964 acaacaaccaagccttattccactaagtggggtctgctacatgaatcaaacgacgccatagtattatgtcaaaaaccatgtctttcaccaattcattaat 31453063  T
Q  231 atctagatccttcttgatagtttct 255  Q
    |||||||||||||||||||||||||    
T  31453064 atctagatccttcttgatagtttct 31453088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 37351664 - 37351562
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttct-acaaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 252  Q
    ||||||||||||||||||| |||||||||||| || || |||||| |||||||| || ||||| |||| ||||||||  |||||||| |||||||| |||    
T  37351664 ctaagtggggtcggctacatgaatcaaacgacgtcgtagtgttctaacaaaaaccatatctttctccatctcattaatctctagatctttcttgattgtt 37351565  T
Q  253 tct 255  Q
    |||    
T  37351564 tct 37351562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 26990491 - 26990368
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttctacaaaaactatgtctttatccaactcattaaca 231  Q
    ||||||| |||| |||||| | ||||||||||||||||||  ||||||||| ||||| | ||  | |  |||||  |||||||| ||||||||||| |      
T  26990491 acaacaaccaagccttatctcactaagtggggtcggctacgtgaatcaaacaacatcgtgtttctatcaaaaaaacatgtctttctccaactcattgatc 26990392  T
Q  232 tctagatccttcttgatagtttct 255  Q
    ||||||||||||||||||||||||    
T  26990391 tctagatccttcttgatagtttct 26990368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 27893355 - 27893244
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttc 243  Q
    |||||||| ||||||||| ||||||||| ||||||||| |   |||| ||||||  ||||||  |||||||| |||||||||||||  ||||| |||||     
T  27893355 cttatcccactaagtgggatcggctacatgaatcaaacaatgccatagtgttctttcaaaaatcatgtctttctccaactcattaatctctaggtccttt 27893256  T
Q  244 ttgatagtttct 255  Q
    || |||||||||    
T  27893255 ttaatagtttct 27893244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 31566164 - 31566231
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||| |||| |||||||    
T  31566164 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttcta 31566231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 3987613 - 3987519
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactca 225  Q
    ||||||| |||| |||||||| | |||||||||||| |||| ||||||||| ||  |||| ||| ||| ||||||| |||||||| |||||||||    
T  3987613 acaacaaccaagtcttatcccacaaagtggggtcgggtacatgaatcaaacaacgccatagtgtcctatcaaaaaccatgtctttctccaactca 3987519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 223
Target Start/End: Original strand, 311312 - 311404
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaact 223  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || |||  ||||||||    
T  311312 acaacaaccaagccttatcccactaagtggggtcggctacatgtatcaaatgacgccatagtgttctatcaaaaaccatatctggatccaact 311404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 5169111 - 5169015
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || | |  ||||||||||||    
T  5169111 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 5169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 34719083 - 34719135
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacga 184  Q
    ||||||| |||| |||||||| |||||||||||| || |||||||||||||||    
T  34719083 acaacaaccaagccttatccccctaagtggggtcagccacaagaatcaaacga 34719135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 12096708 - 12096775
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  12096708 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 12096775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 21862744 - 21862811
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||| | ||||||||||||||||||| | |||||| |||| |||||| |||||    
T  21862744 acaacaagcaagccttatctcactaagtggggtcggctacatggatcaaatgacaccatattcttcta 21862811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 47233599 - 47233666
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| |||| |||||||||||||| |||||||| |||  |||| |||||||    
T  47233599 acaacaaccaagccttatcccactaactggggtcggctacatgaatcaaatgacgccatagtgttcta 47233666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 252
Target Start/End: Original strand, 50631898 - 50632005
Alignment:
Q  146 ttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttct 244  Q
    ||||||| ||||||||||| |||| || ||||||||| |   |||| ||||||| ||||| |||||||||| ||  ||| ||| |  |||||||||||||    
T  50631898 ttatcccactaagtggggttggctgcatgaatcaaacaatggcataatgttctatcaaaagctatgtctttgtcatactgattgatctctagatccttct 50631997  T
Q  245 tgatagtt 252  Q
    ||||||||    
T  50631998 tgatagtt 50632005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 52139079 - 52139012
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||  || ||||| |||||||    
T  52139079 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttcta 52139012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 53519859 - 53519792
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||| | ||||||||||||||||||| | |||||| ||| ||||| |||||||    
T  53519859 acaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttcta 53519792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 37083295 - 37083337
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaag 174  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  37083295 acaacaaccaagccttatcccactaagtggggtcggctacaag 37083337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 41530040 - 41529991
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  41530040 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 41529991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 45373392 - 45373311
Alignment:
Q  169 tacaagaatcaaacgacatcatattgttctacaaaaactatgtctttatccaactcattaacatctagatccttcttgatag 250  Q
    |||| ||||||||||||  |||| |||||||  ||||| ||||| |||||||||||||| ||  ||| ||| ||||||||||    
T  45373392 tacatgaatcaaacgacgccatagtgttctatcaaaaccatgtcgttatccaactcatttaccactaaatctttcttgatag 45373311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 48508514 - 48508465
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  48508514 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 48508465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 14415263 - 14415303
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  14415263 acaacaaccaagtcttatcccactaagtggggtcggctaca 14415303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 29601156 - 29601052
Alignment:
Q  147 tatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttctt 245  Q
    |||||| |||||||||||| |||||| | ||||||  |||||||| ||||||| || ||||||| | |  ||||||||||||||  |||| ||| |||||    
T  29601156 tatcccactaagtggggtcagctacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttctt 29601057  T
Q  246 gatag 250  Q
     ||||    
T  29601056 aatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 39512822 - 39512782
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  39512822 acaacaaccaagccttatcccactaagtggggtcggctaca 39512782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 48532237 - 48532197
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  48532237 acaacaaccaagccttatcccactaagtggggtcggctaca 48532197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 48734150 - 48734190
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    |||||||||||| |||||||| |||||||||||| ||||||    
T  48734150 acaacaatcaagccttatcccactaagtggggtcagctaca 48734190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 52927852 - 52927900
Alignment:
Q  133 caacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  52927852 caacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 52927900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 53262420 - 53262380
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  53262420 acaacaaccaagccttatcccactaagtggggtcggctaca 53262380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 19119441 - 19119551
Alignment:
Q  146 ttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttct 244  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||| |||| || ||||| | |||||||| || |||||||| |  ||||||||| |||    
T  19119441 ttatcccactaagtggggtcggctacatgaatcaaacgacgtcatagtgttgtatcaaaagccatgtctttctcaaactcattgatctctagatccatct 19119540  T
Q  245 tgatagtttct 255  Q
    |||||||||||    
T  19119541 tgatagtttct 19119551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 34746026 - 34745902
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||| ||  ||||  |||||| ||||||| |||| ||| ||||||||||| |     
T  34746026 acaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtttttctccaactcatttat 34745927  T
Q  231 atctagatccttcttgatagtttct 255  Q
     | |||||||||| | |||||||||    
T  34745926 ctttagatccttcctaatagtttct 34745902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 5336193 - 5336077
Alignment:
Q  135 acaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatc 233  Q
    |||| |||| |||||||| ||| ||||| ||||||||| ||||||||||||  |||| | ||| | ||||||| |||||||| |||||||||||||  ||    
T  5336193 acaaccaagtcttatcccactatgtggg-tcggctacatgaatcaaacgacgccatagtattcaatcaaaaaccatgtctttctccaactcattaatctc 5336095  T
Q  234 tagatccttcttgatagt 251  Q
    |||||| ||||| |||||    
T  5336094 tagatcattcttaatagt 5336077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 37618224 - 37618157
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||| |||| |||||||    
T  37618224 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttcta 37618157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 48735904 - 48735999
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttctacaaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||  |||||||| ||||||||||| ||||||| ||||||||||||  |||| | |||| || |||| |||||||| || ||||||||    
T  48735904 acaacaaccaaaccttatcccactaagtggggttggctacatgaatcaaacgacgccatagtattcttcataaaccatgtctttctcaaactcatt 48735999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 14594031 - 14593941
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||| |||| | |||||| | || ||||||| ||||||| ||||| || |||||    
T  14594031 acaacaaccaagccttatcccactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgtccttctccaa 14593941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 221
Target Start/End: Complemental strand, 16013554 - 16013464
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaa 221  Q
    ||||||| |||| |||||||| ||||||||||||||||||| |||| | |||||| | || ||||||| ||||||| ||||| || |||||    
T  16013554 acaacaaccaagccttatcccactaagtggggtcggctacatgaattatacgacaccgtagtgttctatcaaaaaccatgtccttctccaa 16013464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 17759539 - 17759485
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||| ||||||||||||||||||| ||||||||| ||| |||| |||||||    
T  17759539 cttatcccactaagtggggtcggctacatgaatcaaacaacaccatagtgttcta 17759485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 7273379 - 7273330
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||||||||| |||||||| ||||||||||||||||||| | ||||||    
T  7273379 acaacaatcaagccttatcccactaagtggggtcggctacatggatcaaa 7273330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 6375148 - 6375080
Alignment:
Q  131 gacaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  6375148 gacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 6375080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 31840509 - 31840441
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttctac 200  Q
    ||||||| |||| |||||||| |||||| |||| ||||||| ||||||||||||  |||| ||||||||    
T  31840509 acaacaaccaagccttatcccactaagtagggtaggctacatgaatcaaacgacgccatagtgttctac 31840441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 2885725 - 2885792
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||  ||| |||| |||||||    
T  2885725 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttcta 2885792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 11594239 - 11594172
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  11594239 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 11594172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 12841278 - 12841345
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  12841278 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 12841345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 28208331 - 28208398
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  28208331 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 28208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 31682605 - 31682672
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  31682605 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 31682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 39812217 - 39812150
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| |||||||||| |  ||||| | |||||||||||||||| |||||||    
T  39812217 acaacaaccaagccttatcccactaagtggggccaactacatggatcaaacgacatcataatgttcta 39812150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 39906375 - 39906442
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  39906375 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 39906442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 43491587 - 43491520
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | || |||  |||||||| |||||||    
T  43491587 acaacaaccaagccttatcccactaagtggggtcggctacatggatgaaattacatcatagtgttcta 43491520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 6682624 - 6682582
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaac 182  Q
    |||| |||||||| ||||||||||||||||||| |||||||||    
T  6682624 caagccttatcccactaagtggggtcggctacatgaatcaaac 6682582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 25578139 - 25578025
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||  |||||||| |||||| || | ||||||| ||||| ||| ||  |||| |||| || ||||||| |||||||| ||||| |||||||     
T  25578139 acaacaaccaatccttatcccactaagtaggtttggctacacgaatctaacaacgccatagtgttttatcaaaaaccatgtctttctccaattcattaat 25578040  T
Q  231 atctagatccttctt 245  Q
     ||||||||||||||    
T  25578039 ctctagatccttctt 25578025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 31005484 - 31005430
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgaca 186  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| ||||    
T  31005484 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaca 31005430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Original strand, 35172081 - 35172127
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcata 191  Q
    |||||| | |||||| |||||||||||| ||||||||||||||||||    
T  35172081 cttatctcactaagtagggtcggctacatgaatcaaacgacatcata 35172127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 39738448 - 39738498
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaac 182  Q
    ||||||| |||| |||||||| ||||||||||| ||||||| |||||||||    
T  39738448 acaacaaccaagccttatcccactaagtggggttggctacatgaatcaaac 39738498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 182
Target Start/End: Original strand, 47155179 - 47155225
Alignment:
Q  136 caatcaagacttatcccgctaagtggggtcggctacaagaatcaaac 182  Q
    ||||||||  ||||||| ||||||||||||||||||| |||||||||    
T  47155179 caatcaagctttatcccactaagtggggtcggctacatgaatcaaac 47155225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 6263538 - 6263489
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  6263538 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 6263489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 20525055 - 20525104
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| | || |||||||||||||||||||||||||||| | ||||||    
T  20525055 acaacaaccgagccttatcccgctaagtggggtcggctacatggatcaaa 20525104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 22349899 - 22349850
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||||||||| |||||||| ||||||||||||| ||||| | ||||||    
T  22349899 acaacaatcaagccttatcccactaagtggggtcgactacatggatcaaa 22349850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 27649059 - 27649010
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  27649059 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 27649010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 29650663 - 29650614
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  29650663 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 29650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 31869105 - 31869154
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  31869105 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 31869154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 169
Target Start/End: Original strand, 35734694 - 35734731
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggct 169  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  35734694 acaacaaccaagccttatcccgctaagtggggtcggct 35734731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 40979931 - 40979980
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  40979931 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 40979980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 169
Target Start/End: Complemental strand, 41157934 - 41157897
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggct 169  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  41157934 acaacaatcaagccttatcccactaagtggggtcggct 41157897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 1011325 - 1011285
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  1011325 acaacaaccaagccttatcccactaagtggggtcggctaca 1011285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 21244286 - 21244326
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  21244286 acaacaaccaagccttatcccactaagtggggtcggctaca 21244326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 30914589 - 30914629
Alignment:
Q  215 tatccaactcattaacatctagatccttcttgatagtttct 255  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  30914589 tatccaactcattaatctctagatccttcatgatagtttct 30914629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 32631843 - 32631803
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  32631843 acaacaaccaagccttatcccactaagtggggtcggctaca 32631803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 38921089 - 38921212
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcgg--ctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatta 228  Q
    ||||||| |||| ||| |||| ||||||||||||||  ||||| |||||||| |||  ||||   ||||| ||||||| |||||||| ||||||   |||    
T  38921089 acaacaaccaagccttttccccctaagtggggtcggtcctacatgaatcaaatgacgccatagccttctatcaaaaaccatgtctttctccaacctgtta 38921188  T
Q  229 acatctagatccttcttgatagtt 252  Q
    || | |||||||||||| ||||||    
T  38921189 acctgtagatccttcttaatagtt 38921212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 43281953 - 43281857
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| ||| |||| ||||||||||||||||||| | |||||| |||  |||| ||||||| ||||||| || | |  ||||||||||||    
T  43281953 acaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 43281857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 44855177 - 44855217
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  44855177 acaacaaccaagccttatcccactaagtggggtcggctaca 44855217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 47652826 - 47652786
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  47652826 acaacaaccaagccttatcccactaagtggggtcggctaca 47652786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 3442874 - 3442982
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| ||||| || ||||||||||||||||||| ||||||||||||  |||| ||||||| ||||||| |||||||| ||||| |||||||     
T  3442874 acaacaaccaagccttatgccactaagtggggtcggctacatgaatcaaacgacgccatagtgttctatcaaaaaccatgtctttctccaattcattaat 3442973  T
Q  231 atctagatc 239  Q
     ||||||||    
T  3442974 ctctagatc 3442982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 37065743 - 37065632
Alignment:
Q  145 cttatcccgctaag-tggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatcctt 242  Q
    |||||||| ||||| |||||||||||||| |||||||||||| ||||| || |||| ||||||| |||||||| ||||||||||| |  |||||||||||    
T  37065743 cttatcccactaagctggggtcggctacatgaatcaaacgacttcatagtgctctatcaaaaaccatgtctttctccaactcatttatctctagatcctt 37065644  T
Q  243 cttgatagtttc 254  Q
    | | ||||||||    
T  37065643 cctaatagtttc 37065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 33667714 - 33667600
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| ||||||||  |||||||||| ||||||| ||||||||| ||  || | ||||||| ||||||| |||||||| |||||||||||||     
T  33667714 acaacaaccaagccttatcccaataagtggggttggctacacgaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaat 33667615  T
Q  231 atctagatccttctt 245  Q
     ||||||||||||||    
T  33667614 ctctagatccttctt 33667600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 15252751 - 15252814
Alignment:
Q  136 caatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||| |||||||| ||||||||||||||||||| |||| |||| |||||||| |||||||    
T  15252751 caatcaagccttatcccactaagtggggtcggctacatgaattaaactacatcataatgttcta 15252814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 11002424 - 11002520
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| |||||||| |||||| |||||| ||||| ||||||||| |   |||| ||||||| ||||||||||| |||| |||||||||||    
T  11002424 acaacaaccaagccttatcccactaagtagggtcgactacatgaatcaaacaatgccatagtgttctatcaaaaactatgcctttctccaactcatt 11002520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 28411955 - 28411843
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| ||||||||| ||  |||| ||||||| || |||  |||| ||| ||||| ||||| |     
T  28411955 acaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaacaacgccatagtgttctatcagaaaacatgtttttctccaagtcatttat 28411856  T
Q  231 atctagatccttc 243  Q
     ||||||||||||    
T  28411855 ctctagatccttc 28411843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 2713213 - 2713099
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttctacaaaaactatgtctttatccaactcattaacatc 233  Q
    ||||| |||| |||||||| ||||||||| ||||||||| |||||||||||   |||| |||||||       | ||||||| ||||||||||| |  ||    
T  2713213 aacaaccaagccttatcccactaagtgggctcggctacatgaatcaaacgatgccatagtgttcta-------tctgtctttctccaactcattcatctc 2713121  T
Q  234 tagatccttcttgatagtttct 255  Q
    |||||||||||| |||||||||    
T  2713120 tagatccttcttaatagtttct 2713099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 20457052 - 20456985
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||||||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  20457052 acaacaatcaagccttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttcta 20456985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 28976862 - 28976929
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| |||||||| |||  |||| |||||||    
T  28976862 acaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttcta 28976929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 2075476 - 2075525
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||||||||| |||||||| ||||||||||| ||||||| ||||||||    
T  2075476 acaacaatcaagccttatcccactaagtggggttggctacatgaatcaaa 2075525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 10082748 - 10082872
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||| |  ||||  ||||| |||||| |||||| ||||| ||||| |||  || ||||||| |||||||| |||||||||||||     
T  10082748 acaacaaccaagccttatcacaataagcagggtcagctacatgaatcagacgacgtcatagtgtgttaacaaaaaccatgtctttctccaactcattaat 10082847  T
Q  231 atctagatccttcttgatagtttct 255  Q
     ||||||||||| ||  ||||||||    
T  10082848 ctctagatccttgttactagtttct 10082872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 12492387 - 12492454
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  12492387 acaacaaccaagccttatcccactaagtggggtcggctacatgcatcaaatgacgccatagtgttcta 12492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 13561389 - 13561456
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  13561389 acaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 13561456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 29816661 - 29816594
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  29816661 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 29816594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 38685238 - 38685179
Alignment:
Q  140 caagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||| |||||||| ||||||||||||||||||| | |||||| |||  ||||||||||||    
T  38685238 caagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttcta 38685179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 683717 - 683771
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||||||||||||||| ||||||| | ||||||| ||| |||| |||||||    
T  683717 cttatcccgctaagtggggttggctacatggatcaaactacaacataatgttcta 683771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 1275530 - 1275476
Alignment:
Q  145 cttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||| ||||||||||||||||||| | |||||| ||| ||||| |||||||    
T  1275530 cttatcccactaagtggggtcggctacatggatcaaatgacgtcataatgttcta 1275476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 1525893 - 1525799
Alignment:
Q  162 ggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    ||||||||||| ||||||||| ||  ||||  |||||| ||||||| |||||||| ||||||||||| |  ||| |||||||| | |||||||||    
T  1525893 ggtcggctacatgaatcaaacaacgccatagcgttctatcaaaaaccatgtctttctccaactcatttatctctggatccttcctaatagtttct 1525799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 1935359 - 1935277
Alignment:
Q  174 gaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    ||||||||||||| |||| ||||||  |||||||  ||||||| ||||||||||| |  |||||||||||| | |||||||||    
T  1935359 gaatcaaacgacaccatagtgttctgtcaaaaaccttgtctttctccaactcatttatctctagatccttcctaatagtttct 1935277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 16133997 - 16134095
Alignment:
Q  154 ctaagtggggtcggctacaagaatcaaacgacatcatattgttctacaaaaactatgtctttatccaactcattaacatctagatccttcttgatagtt 252  Q
    |||||||||||| | |||| ||||||||| || | |||||||||||  ||||| |||||||| ||||| ||||| |  | |||||||||| | ||||||    
T  16133997 ctaagtggggtcaggtacatgaatcaaacaacgtaatattgttctaataaaaccatgtctttctccaaatcatttatctttagatccttcataatagtt 16134095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 39041035 - 39040981
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgaca 186  Q
    |||||||||||| ||||||||  |||||||||||||||||| | |||||| ||||    
T  39041035 acaacaatcaagtcttatcccattaagtggggtcggctacatggatcaaatgaca 39040981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 408497 - 408546
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  408497 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 408546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 3302123 - 3302074
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  3302123 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 3302074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 4496663 - 4496614
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  4496663 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 4496614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 9121084 - 9121133
Alignment:
Q  135 acaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacga 184  Q
    |||| |||| |||||||| ||||||| ||||||||||| |||||||||||    
T  9121084 acaaccaagccttatcccactaagtgaggtcggctacatgaatcaaacga 9121133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 9234165 - 9234116
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||||||||| |||||||| |||||||||||||| |||| | ||||||    
T  9234165 acaacaatcaagccttatcccactaagtggggtcggttacatggatcaaa 9234116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 18855886 - 18855837
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  18855886 acaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaa 18855837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 26884692 - 26884741
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    |||||||||||| ||||| || ||||||||||||||||||| | ||||||    
T  26884692 acaacaatcaagccttattccactaagtggggtcggctacatggatcaaa 26884741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 30213852 - 30213787
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  30213852 aacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 30213787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 34119899 - 34119858
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaa 173  Q
    |||| ||||||| |||||||| ||||||||||||||||||||    
T  34119899 acaaaaatcaagccttatcccactaagtggggtcggctacaa 34119858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 3001018 - 3000978
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  3001018 acaacaaccaagccttatcccactaagtggggtcggctaca 3000978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 5860113 - 5860073
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    |||||||||||| |||||||| |||||| ||||||||||||    
T  5860113 acaacaatcaagccttatcccactaagtagggtcggctaca 5860073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 7678756 - 7678692
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgtt 196  Q
    ||||||| ||||  ||||||| ||||||||||||||||||| | ||||||| || ||||| ||||    
T  7678756 acaacaaccaagttttatcccactaagtggggtcggctacatggatcaaactacctcataatgtt 7678692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 14665991 - 14665951
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  14665991 acaacaaccaagccttatcccactaagtggggtcggctaca 14665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 14749502 - 14749462
Alignment:
Q  215 tatccaactcattaacatctagatccttcttgatagtttct 255  Q
    |||||||||| ||||  ||||||||||||||||||||||||    
T  14749502 tatccaactcgttaatctctagatccttcttgatagtttct 14749462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 21952574 - 21952510
Alignment:
Q  192 ttgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    |||||||| ||||||| |||||||| |||||| ||||||  |||||||||||||  |||||||||    
T  21952574 ttgttctatcaaaaaccatgtctttctccaacccattaatctctagatccttctcaatagtttct 21952510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 31635979 - 31636047
Alignment:
Q  188 catattgttctac-aaaaactatgtctttatccaactcattaacatctagatccttcttgatagtttct 255  Q
    |||| |||||||| |||||| |||| ||| ||||||||||| |  |||| |||||||||||||||||||    
T  31635979 catagtgttctaccaaaaaccatgtgtttctccaactcattgatctctatatccttcttgatagtttct 31636047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 255
Target Start/End: Original strand, 10617253 - 10617361
Alignment:
Q  148 atcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacatctagatccttcttg 246  Q
    ||||| |||||||||| ||||||||  |||||||| ||  || | ||||||| ||||||| |||||||| |||||||||||||  ||||||||||||||     
T  10617253 atcccactaagtggggccggctacataaatcaaacaacgccaaagtgttctatcaaaaaccatgtctttctccaactcattaatctctagatccttctta 10617352  T
Q  247 atagtttct 255  Q
    || ||||||    
T  10617353 atggtttct 10617361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 243
Target Start/End: Complemental strand, 9707049 - 9706937
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaac 230  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| ||   |||| ||||||| ||||||| || | |  |||||||||||||||    
T  9707049 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcattaac 9706950  T
Q  231 atctagatccttc 243  Q
     |||| |||||||    
T  9706949 ctctaaatccttc 9706937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 28085655 - 28085588
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||| |||| |||||||    
T  28085655 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttcta 28085588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 171
Target Start/End: Original strand, 5258151 - 5258190
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctac 171  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  5258151 acaacaaccaagacttatcccactaagtggggtcggctac 5258190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 7513394 - 7513504
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcattaacat 232  Q
    ||||| |||| ||| ||| || ||||| | || |||||| ||||||||| ||  |||| ||||||| ||||||| |||||||| ||||||||||| |  |    
T  7513394 aacaaccaagccttgtcctgccaagtgagatcagctacatgaatcaaacaacgccatagtgttctatcaaaaaccatgtctttctccaactcattcatct 7513493  T
Q  233 ctagatccttc 243  Q
    |||||||||||    
T  7513494 ctagatccttc 7513504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 4245877 - 4245942
Alignment:
Q  134 aacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||| |||| |||||||| ||||||||||||||||||  | |||||||||  ||||| |||||||    
T  4245877 aacaaccaagccttatcccactaagtggggtcggctacttggatcaaacgatgtcataatgttcta 4245942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Complemental strand, 12890854 - 12890805
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  12890854 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 12890805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 181
Target Start/End: Original strand, 34934833 - 34934882
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaa 181  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | ||||||    
T  34934833 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaa 34934882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 608440 - 608344
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta-caaaaactatgtctttatccaactcatt 227  Q
    ||||||| |||| |||||||| |||||| |||||||||||| | |||||| ||| ||||| | ||||| ||||||| || | |  ||||||||||||    
T  608440 acaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaatgacgtcatagtattctatcaaaaaccatatttggatccaactcatt 608344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 30643048 - 30643008
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  30643048 acaacaaccaagccttaacccgctaagtggggtcggctaca 30643008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 33730244 - 33730204
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctaca 172  Q
    ||||||| |||| |||||||| |||||||||||||||||||    
T  33730244 acaacaaccaagccttatcccactaagtggggtcggctaca 33730204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 99289 - 99390
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta--caaaaactatgtctttatccaactcattaa 229  Q
    ||||||| |||| |||||||| ||| |||| |||||||||| || |||||||||| ||||  ||||||  ||||||| |||||| | |||||||||||||    
T  99289 acaacaaccaagccttatcccactatgtggtgtcggctacatgattcaaacgacaccatagcgttctatacaaaaaccatgtctgtctccaactcattaa 99388  T
Q  230 ca 231  Q
    ||    
T  99389 ca 99390  T

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Target: scaffold1318 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 610 - 543
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    |||||||||||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  610 acaacaatcaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 543  T

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Target: scaffold0168 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Original strand, 28892 - 28959
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| |||  |||| |||||||    
T  28892 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttcta 28959  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 199
Target Start/End: Complemental strand, 31747 - 31680
Alignment:
Q  132 acaacaatcaagacttatcccgctaagtggggtcggctacaagaatcaaacgacatcatattgttcta 199  Q
    ||||||| |||| |||||||| ||||||||||||||||||| | |||||| ||| ||| | |||||||    
T  31747 acaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacttcacagtgttcta 31680  T

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