View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1247_high_51 (Length: 234)
Name: NF1247_high_51
Description: NF1247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1247_high_51 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 80 - 234
Target Start/End: Complemental strand, 15264952 - 15264798
Alignment:
| Q |
80 |
caaaggggttcagataggaagaaacaggtccatagtgttggcactgtctaataaatgcgaatgacattgagaattaaacataatgtatcaatgtgtatga |
179 |
Q |
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| T |
15264952 |
caaaggggttcagataggaagaaacaggtccatagtgttggcactgtctaataaatgcgaatgacattgagaattaaacataatgtagcaatgtgtatga |
15264853 |
T |
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| Q |
180 |
gtagttttactcagtagcaacttgaaccaattgctataaatgcacctctgttgtt |
234 |
Q |
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| T |
15264852 |
gtagttttactcagtagcaacttgaaccaattgctataaatgcacctctgttgtt |
15264798 |
T |
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