View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1247_low_26 (Length: 368)

Name: NF1247_low_26
Description: NF1247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1247_low_26
NF1247_low_26
[»] chr3 (52 HSPs)
chr3 (10-88)||(3136729-3136807)
chr3 (10-89)||(45877446-45877526)
chr3 (9-89)||(29135905-29135986)
chr3 (10-89)||(49198343-49198423)
chr3 (10-86)||(29127914-29127991)
chr3 (10-81)||(26043812-26043884)
chr3 (10-86)||(6462407-6462484)
chr3 (10-86)||(30767282-30767359)
chr3 (10-86)||(54261221-54261298)
chr3 (10-85)||(7650223-7650299)
chr3 (10-78)||(24506683-24506751)
chr3 (10-89)||(25294952-25295032)
chr3 (21-88)||(35315949-35316017)
chr3 (29-85)||(47749159-47749215)
chr3 (10-88)||(7328837-7328915)
chr3 (29-88)||(10040550-10040609)
chr3 (29-88)||(15795548-15795607)
chr3 (10-88)||(26207836-26207915)
chr3 (10-87)||(53649721-53649799)
chr3 (10-86)||(8164548-8164625)
chr3 (10-86)||(30045816-30045893)
chr3 (10-85)||(3507568-3507644)
chr3 (10-89)||(42412809-42412889)
chr3 (10-89)||(47219136-47219216)
chr3 (21-85)||(47471828-47471892)
chr3 (22-89)||(51060328-51060396)
chr3 (21-87)||(29762201-29762268)
chr3 (10-77)||(39849076-39849143)
chr3 (10-88)||(45402386-45402465)
chr3 (10-83)||(11687144-11687218)
chr3 (29-89)||(13893918-13893979)
chr3 (10-86)||(33251657-33251734)
chr3 (10-63)||(33688970-33689023)
chr3 (10-83)||(45450482-45450555)
chr3 (10-86)||(48342015-48342092)
chr3 (10-89)||(49082816-49082896)
chr3 (30-89)||(51683009-51683069)
chr3 (10-84)||(7310738-7310813)
chr3 (10-88)||(15320179-15320258)
chr3 (10-88)||(28572246-28572325)
chr3 (10-87)||(8362571-8362649)
chr3 (29-82)||(10855383-10855437)
chr3 (40-86)||(11025438-11025484)
chr3 (29-87)||(19873361-19873419)
chr3 (10-82)||(41630547-41630620)
chr3 (21-89)||(54237440-54237509)
chr3 (10-89)||(3755562-3755642)
chr3 (39-86)||(7612990-7613038)
chr3 (10-89)||(28242270-28242350)
chr3 (29-88)||(31072871-31072931)
chr3 (10-62)||(35923658-35923710)
chr3 (29-88)||(52364854-52364914)
[»] chr7 (40 HSPs)
chr7 (10-89)||(48804678-48804758)
chr7 (10-88)||(13095854-13095933)
chr7 (21-89)||(10047921-10047990)
chr7 (21-88)||(43925508-43925576)
chr7 (10-88)||(10317780-10317858)
chr7 (22-88)||(18785665-18785732)
chr7 (10-88)||(38578901-38578980)
chr7 (12-89)||(4195238-4195316)
chr7 (10-86)||(36619288-36619365)
chr7 (10-86)||(43862006-43862083)
chr7 (10-89)||(21190814-21190894)
chr7 (29-88)||(47341872-47341932)
chr7 (29-87)||(17748435-17748494)
chr7 (10-88)||(34659222-34659301)
chr7 (10-87)||(22973964-22974042)
chr7 (29-82)||(27028281-27028335)
chr7 (21-86)||(22573811-22573876)
chr7 (29-82)||(24969379-24969431)
chr7 (10-86)||(27875122-27875199)
chr7 (10-85)||(30827291-30827367)
chr7 (10-88)||(1605937-1606016)
chr7 (10-84)||(26423321-26423396)
chr7 (29-86)||(43346832-43346890)
chr7 (29-89)||(1797455-1797516)
chr7 (20-89)||(45697234-45697303)
chr7 (21-88)||(14650313-14650381)
chr7 (39-86)||(22268092-22268140)
chr7 (10-85)||(3353424-3353499)
chr7 (10-88)||(16802119-16802198)
chr7 (10-87)||(5039452-5039530)
chr7 (10-87)||(45960037-45960115)
chr7 (29-85)||(14535290-14535347)
chr7 (10-74)||(32823253-32823318)
chr7 (10-86)||(39474938-39475015)
chr7 (10-82)||(45447972-45448045)
chr7 (10-86)||(48244390-48244467)
chr7 (10-89)||(4228788-4228865)
chr7 (29-88)||(5069868-5069928)
chr7 (29-88)||(22993420-22993480)
chr7 (11-86)||(49142704-49142780)
[»] chr4 (50 HSPs)
chr4 (10-89)||(1446823-1446903)
chr4 (10-89)||(29895784-29895864)
chr4 (10-88)||(42722413-42722491)
chr4 (10-89)||(3159503-3159583)
chr4 (14-89)||(40272369-40272445)
chr4 (13-75)||(20421784-20421847)
chr4 (10-83)||(6779214-6779288)
chr4 (10-83)||(48834734-48834807)
chr4 (10-85)||(3574480-3574556)
chr4 (10-89)||(8889019-8889099)
chr4 (21-88)||(20532454-20532522)
chr4 (21-88)||(53599058-53599126)
chr4 (29-88)||(55921032-55921092)
chr4 (10-88)||(7246680-7246759)
chr4 (10-88)||(42722611-42722690)
chr4 (10-88)||(47078456-47078535)
chr4 (10-87)||(16645117-16645195)
chr4 (10-88)||(36262801-36262878)
chr4 (13-84)||(10541018-10541090)
chr4 (10-89)||(46108691-46108768)
chr4 (10-89)||(295567-295646)
chr4 (10-76)||(16450310-16450377)
chr4 (10-88)||(36145249-36145328)
chr4 (21-83)||(38075436-38075499)
chr4 (10-88)||(41339429-41339508)
chr4 (10-88)||(43468345-43468424)
chr4 (29-86)||(2559307-2559365)
chr4 (10-87)||(24166449-24166527)
chr4 (11-84)||(48015108-48015182)
chr4 (10-89)||(27248425-27248503)
chr4 (10-86)||(33647721-33647798)
chr4 (10-82)||(40780895-40780968)
chr4 (41-89)||(41162947-41162996)
chr4 (10-86)||(52950082-52950159)
chr4 (10-89)||(5472882-5472962)
chr4 (29-84)||(14124018-14124074)
chr4 (10-86)||(15839969-15840045)
chr4 (10-62)||(17080068-17080120)
chr4 (21-89)||(24850672-24850740)
chr4 (10-89)||(38166024-38166104)
chr4 (11-86)||(17946490-17946565)
chr4 (21-86)||(26479994-26480060)
chr4 (11-88)||(29588734-29588812)
chr4 (29-89)||(15732501-15732562)
chr4 (10-70)||(15829715-15829776)
chr4 (10-63)||(49260699-49260752)
chr4 (29-89)||(3507268-3507328)
chr4 (29-89)||(6862222-6862282)
chr4 (10-89)||(20128306-20128386)
chr4 (10-89)||(21429298-21429378)
[»] chr1 (47 HSPs)
chr1 (10-89)||(49078107-49078187)
chr1 (10-87)||(10422783-10422861)
chr1 (10-86)||(47312934-47313010)
chr1 (10-89)||(11397924-11398003)
chr1 (10-87)||(5855517-5855595)
chr1 (21-89)||(41663902-41663971)
chr1 (10-89)||(2980966-2981046)
chr1 (10-88)||(18915861-18915940)
chr1 (33-89)||(34334353-34334410)
chr1 (10-89)||(26325805-26325885)
chr1 (21-84)||(32142892-32142956)
chr1 (10-89)||(48798105-48798185)
chr1 (10-88)||(8763985-8764064)
chr1 (24-86)||(16263541-16263604)
chr1 (10-87)||(26660133-26660211)
chr1 (10-87)||(9659214-9659291)
chr1 (10-82)||(17642039-17642112)
chr1 (29-89)||(50503415-50503476)
chr1 (10-85)||(28324615-28324691)
chr1 (10-89)||(33004050-33004130)
chr1 (10-84)||(18708575-18708650)
chr1 (10-77)||(21849240-21849307)
chr1 (29-87)||(34877985-34878044)
chr1 (10-88)||(43959856-43959935)
chr1 (10-87)||(14254303-14254381)
chr1 (21-89)||(10336509-10336578)
chr1 (14-86)||(15465961-15466034)
chr1 (29-86)||(25165397-25165454)
chr1 (10-82)||(30927762-30927835)
chr1 (10-82)||(33498874-33498947)
chr1 (10-86)||(34719772-34719849)
chr1 (10-88)||(37339813-37339893)
chr1 (12-83)||(2567275-2567347)
chr1 (10-77)||(41696633-41696701)
chr1 (10-85)||(45361917-45361993)
chr1 (29-88)||(45536702-45536762)
chr1 (29-87)||(40288531-40288590)
chr1 (24-82)||(42710187-42710246)
chr1 (10-84)||(45726468-45726543)
chr1 (39-89)||(8905215-8905265)
chr1 (10-87)||(34697330-34697408)
chr1 (10-86)||(13262079-13262156)
chr1 (10-85)||(35908754-35908831)
chr1 (11-86)||(17358507-17358583)
chr1 (10-85)||(31152713-31152789)
chr1 (21-84)||(32150968-32151032)
chr1 (10-82)||(44969665-44969737)
[»] scaffold0291 (1 HSPs)
scaffold0291 (10-88)||(6851-6930)
[»] chr5 (46 HSPs)
chr5 (11-86)||(38897754-38897829)
chr5 (10-89)||(19572717-19572797)
chr5 (21-88)||(28857122-28857190)
chr5 (11-87)||(38369695-38369771)
chr5 (21-87)||(1538426-1538493)
chr5 (10-88)||(5731954-5732033)
chr5 (10-89)||(20525831-20525911)
chr5 (10-83)||(9805003-9805077)
chr5 (13-85)||(13664257-13664330)
chr5 (21-89)||(42861263-42861332)
chr5 (29-87)||(25417236-25417295)
chr5 (21-88)||(41163505-41163572)
chr5 (10-84)||(42086325-42086400)
chr5 (11-88)||(15034069-15034147)
chr5 (10-88)||(37263235-37263313)
chr5 (10-86)||(30995117-30995194)
chr5 (21-84)||(23383655-23383719)
chr5 (10-89)||(35561852-35561932)
chr5 (34-88)||(1898995-1899050)
chr5 (10-85)||(2485194-2485269)
chr5 (10-88)||(8513513-8513592)
chr5 (10-89)||(9168287-9168366)
chr5 (21-87)||(40117410-40117477)
chr5 (10-86)||(14588651-14588728)
chr5 (29-89)||(18136333-18136394)
chr5 (10-59)||(20255393-20255442)
chr5 (21-89)||(30349572-30349641)
chr5 (39-83)||(40060295-40060340)
chr5 (10-89)||(14974358-14974438)
chr5 (29-88)||(20682670-20682730)
chr5 (2-62)||(22295237-22295297)
chr5 (10-62)||(39099813-39099865)
chr5 (10-84)||(7308398-7308473)
chr5 (22-88)||(9812866-9812933)
chr5 (10-88)||(12766125-12766204)
chr5 (39-89)||(16755054-16755105)
chr5 (10-88)||(42291539-42291618)
chr5 (29-82)||(4016308-4016362)
chr5 (29-83)||(18294537-18294591)
chr5 (13-59)||(20156181-20156227)
chr5 (24-89)||(24653859-24653925)
chr5 (13-86)||(26077137-26077211)
chr5 (29-89)||(12081901-12081962)
chr5 (29-84)||(7866579-7866635)
chr5 (29-88)||(18262671-18262731)
chr5 (29-88)||(39728381-39728441)
[»] chr8 (26 HSPs)
chr8 (10-88)||(45521166-45521244)
chr8 (10-89)||(2467152-2467232)
chr8 (10-89)||(14666105-14666185)
chr8 (10-86)||(15884590-15884666)
chr8 (21-87)||(8141100-8141167)
chr8 (10-87)||(33401833-33401911)
chr8 (10-86)||(3418547-3418624)
chr8 (10-86)||(9860029-9860106)
chr8 (10-89)||(6100468-6100548)
chr8 (10-88)||(10927603-10927682)
chr8 (21-83)||(4479341-4479403)
chr8 (10-88)||(14846573-14846651)
chr8 (10-88)||(6042818-6042897)
chr8 (10-84)||(33935769-33935844)
chr8 (21-89)||(1013022-1013091)
chr8 (32-88)||(38922470-38922527)
chr8 (10-82)||(583817-583888)
chr8 (29-84)||(36662406-36662461)
chr8 (40-87)||(43497658-43497705)
chr8 (25-88)||(24837239-24837303)
chr8 (13-88)||(11785913-11785988)
chr8 (19-88)||(17981438-17981508)
chr8 (21-61)||(11298312-11298352)
chr8 (10-62)||(26570948-26571000)
chr8 (41-88)||(44031505-44031553)
chr8 (29-88)||(44893331-44893391)
[»] chr6 (24 HSPs)
chr6 (10-87)||(13036038-13036116)
chr6 (21-88)||(5253268-5253336)
chr6 (10-89)||(21898644-21898724)
chr6 (21-85)||(29333184-29333248)
chr6 (11-88)||(29444800-29444878)
chr6 (21-89)||(8932657-8932726)
chr6 (21-89)||(8944123-8944192)
chr6 (10-89)||(6606131-6606211)
chr6 (10-89)||(10311503-10311583)
chr6 (10-87)||(14107392-14107470)
chr6 (10-89)||(12606426-12606506)
chr6 (22-89)||(3587991-3588059)
chr6 (10-89)||(19089494-19089574)
chr6 (10-89)||(5333001-5333080)
chr6 (10-61)||(32157201-32157252)
chr6 (11-88)||(11142600-11142678)
chr6 (21-63)||(21945312-21945354)
chr6 (21-89)||(8938707-8938776)
chr6 (10-86)||(9147300-9147377)
chr6 (21-85)||(9179781-9179846)
chr6 (29-89)||(12635810-12635871)
chr6 (10-83)||(13391289-13391362)
chr6 (10-86)||(34954653-34954730)
chr6 (32-87)||(3601082-3601138)
[»] chr2 (46 HSPs)
chr2 (10-89)||(6358185-6358265)
chr2 (10-88)||(331494-331573)
chr2 (13-84)||(33005749-33005820)
chr2 (10-87)||(12864218-12864296)
chr2 (21-86)||(34356201-34356267)
chr2 (22-89)||(38962755-38962823)
chr2 (21-88)||(41220628-41220696)
chr2 (10-89)||(2784925-2785004)
chr2 (10-88)||(7787049-7787128)
chr2 (10-88)||(12455303-12455382)
chr2 (21-87)||(20612580-20612648)
chr2 (29-89)||(45263720-45263781)
chr2 (10-89)||(2550860-2550940)
chr2 (10-88)||(8410124-8410203)
chr2 (10-88)||(10823053-10823132)
chr2 (10-88)||(38005395-38005474)
chr2 (10-87)||(14169643-14169721)
chr2 (13-86)||(34346324-34346398)
chr2 (21-89)||(3643932-3644001)
chr2 (10-74)||(16325602-16325667)
chr2 (10-86)||(44139479-44139556)
chr2 (10-89)||(7747266-7747346)
chr2 (10-89)||(28616413-28616493)
chr2 (10-85)||(41031940-41032016)
chr2 (10-89)||(35946731-35946810)
chr2 (10-87)||(18902564-18902642)
chr2 (10-73)||(28525489-28525554)
chr2 (10-82)||(10026650-10026723)
chr2 (29-89)||(21286436-21286497)
chr2 (10-86)||(25540438-25540515)
chr2 (44-88)||(29422208-29422253)
chr2 (21-84)||(3811736-3811800)
chr2 (30-89)||(14853421-14853481)
chr2 (10-88)||(15079476-15079555)
chr2 (10-88)||(15234095-15234174)
chr2 (10-88)||(22593128-22593206)
chr2 (10-88)||(39806919-39806998)
chr2 (10-83)||(21180348-21180422)
chr2 (20-82)||(25604594-25604656)
chr2 (24-85)||(40968963-40969025)
chr2 (10-75)||(24179575-24179640)
chr2 (19-80)||(29421285-29421345)
chr2 (13-80)||(10669593-10669661)
chr2 (10-85)||(13026445-13026521)
chr2 (10-89)||(19976841-19976921)
chr2 (10-62)||(30721889-30721941)
[»] scaffold0384 (1 HSPs)
scaffold0384 (21-88)||(5969-6036)
[»] scaffold0079 (1 HSPs)
scaffold0079 (29-88)||(8171-8230)
[»] scaffold0050 (1 HSPs)
scaffold0050 (10-85)||(72631-72707)
[»] scaffold0170 (1 HSPs)
scaffold0170 (10-84)||(9845-9920)
[»] scaffold0316 (1 HSPs)
scaffold0316 (10-86)||(1648-1725)
[»] scaffold0086 (1 HSPs)
scaffold0086 (10-86)||(26181-26258)
[»] scaffold0004 (1 HSPs)
scaffold0004 (24-88)||(7883-7948)
[»] scaffold0002 (2 HSPs)
scaffold0002 (21-89)||(319417-319486)
scaffold0002 (10-88)||(566-645)
[»] scaffold0209 (1 HSPs)
scaffold0209 (10-82)||(12577-12648)
[»] scaffold0016 (1 HSPs)
scaffold0016 (21-84)||(8746-8810)
[»] scaffold0029 (1 HSPs)
scaffold0029 (10-85)||(41043-41119)
[»] scaffold0332 (1 HSPs)
scaffold0332 (57-88)||(15327-15358)
[»] scaffold0009 (1 HSPs)
scaffold0009 (42-86)||(9434-9479)
[»] scaffold0376 (1 HSPs)
scaffold0376 (29-88)||(12666-12726)


Alignment Details
Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 3136729 - 3136807
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| ||||||||| ||||||||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  3136729 gactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccctgaaaatcgaatccggtattccccgg 3136807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 45877526 - 45877446
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45877526 gactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccgga 45877446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 29135986 - 29135905
Alignment:
Q  9 agactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||||    
T  29135986 agactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccgga 29135905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 49198423 - 49198343
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||    
T  49198423 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgga 49198343  T

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Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 29127991 - 29127914
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  29127991 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattcccc 29127914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 26043884 - 26043812
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtat 81  Q
    |||||||| | ||||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||||||    
T  26043884 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 6462484 - 6462407
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| ||||||| |||||  ||||||||||||||||||||    
T  6462484 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattcccc 6462407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 30767282 - 30767359
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||    
T  30767282 gactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattcccc 30767359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 54261298 - 54261221
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||||||    
T  54261298 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattcccc 54261221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 7650299 - 7650223
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||| ||| || ||||||||||||||||||||| |||||||||||||||||||||||    
T  7650299 gactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtattccc 7650223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 24506683 - 24506751
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccgg 78  Q
    |||||||||||||||||| |||||||||  ||||||| |||| |||||| ||||| |||||||||||||    
T  24506683 gactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtttccctgaaaatcgaacccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 25295032 - 25294952
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||| |||||| |  |||| ||||||||||||||||||    
T  25295032 gactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccgga 25294952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 35316017 - 35315949
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  35316017 ctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgg 35315949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 85
Target Start/End: Original strand, 47749159 - 47749215
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 85  Q
    ||||||||| ||||||||||||| ||||||||||| | |||||||||||||||||||    
T  47749159 tagaggcatgcgcactggccaagagttgttcccctaggaatcgaacccggtattccc 47749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7328915 - 7328837
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| || |||||| |||||||||||||||||||| ||||||| |||||||||||||||| |||||    
T  7328915 gactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgg 7328837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 10040609 - 10040550
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| ||||||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  10040609 tagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccgatattccccgg 10040550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 15795548 - 15795607
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| ||||||| ||||| ||||||||||||| |||||||| |||||||||||||    
T  15795548 tagaggcatgcgcactgaccaagcgttgttcccctgggaatcgaactcggtattccccgg 15795607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 26207836 - 26207915
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| | |||||| |||| |||||||||| ||| ||||||||||||||||||||||    
T  26207836 gactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgg 26207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 53649799 - 53649721
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||| ||  ||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  53649799 gactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtattccccg 53649721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 8164625 - 8164548
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||||| ||||| ||| || |||||| ||||||||||||| |||||||||| | ||||| ||||||||||||||||    
T  8164625 gactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattcccc 8164548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 30045893 - 30045816
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| ||||| ||| ||||| ||| ||||||||||||| |||||| ||||| | ||||||||||||||||||||    
T  30045893 gactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattcccc 30045816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 3507568 - 3507644
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||||||||||||| || | |||| ||||||||||||||    
T  3507568 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtattccc 3507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 42412809 - 42412889
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccct-ggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||||||  ||||| |||||| ||||||||||  || |||||||||||||||||||||||    
T  42412809 gactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccgga 42412889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 47219216 - 47219136
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccct-ggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||| |||||| |||||| |||| || ||||||||| |||||||||||||    
T  47219216 gactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtattccccgga 47219136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 47471892 - 47471828
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 85  Q
    ||||||| |||| |||| |||||| ||||||  |||||||||||| |||||||||||||||||||    
T  47471892 ctcatgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaacccggtattccc 47471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 51060328 - 51060396
Alignment:
Q  22 tcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||||  ||||||||||| |||||||||||    
T  51060328 tcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaacccgatattccccgga 51060396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 29762201 - 29762268
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||  ||||| ||||| |||||||||    
T  29762201 ctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccg 29762268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 39849143 - 39849076
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 77  Q
    |||||||| | ||||||| ||||||||| | ||||||||||| |||||||| |||| |||||||||||    
T  39849143 gactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccg 39849076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 45402386 - 45402465
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||| |||| |||||||||||| || | ||||||||||| ||||||||||    
T  45402386 gactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattccccgg 45402465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 11687144 - 11687218
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 83  Q
    |||||||||||||||| | ||||||||| |||||||||||||  ||||| ||||||  |||| ||||||||||||    
T  11687144 gactaatctgactcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattc 11687218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 13893979 - 13893918
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||||||| |||| || ||||| |||||||||| |||||||| ||||||||||||||||||    
T  13893979 tagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccgga 13893918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 33251734 - 33251657
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| | ||||||||||  ||||||||| | || ||||||||||||||||||||    
T  33251734 gactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccc 33251657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 33689023 - 33688970
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccct 63  Q
    |||||| ||| ||||||| ||||||||| ||||||||||||||||| |||||||    
T  33689023 gactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattcccct 33688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 45450482 - 45450555
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 83  Q
    |||||||||  || |||| ||||||||| |||||||| ||||  ||||||||||||||||| ||||| ||||||    
T  45450482 gactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttcccctggaaatcaaacccagtattc 45450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 48342092 - 48342015
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    ||||||||||  |||||| ||||||||| |||||| |||||| |||||||||| | | ||| ||||||||||||||||    
T  48342092 gactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattcccc 48342015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 49082896 - 49082816
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||||| || ||  |||| |||| ||||||||| ||| ||||||| |||||| |||||||| ||||||||||||||    
T  49082896 gactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccgga 49082816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 51683009 - 51683069
Alignment:
Q  30 agaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||| |||||||| |||| |||||||||| ||| ||||||||| |||||||||||||    
T  51683009 agaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccgga 51683069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 7310738 - 7310813
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcc 84  Q
    |||||||| | ||| ||| ||||||||| | ||| || |||||||||||||| |||| ||||||||||||||||||    
T  7310738 gactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtattcc 7310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 15320258 - 15320179
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| | ||||||||||   ||||||| ||| ||||||||||||||||||||||||    
T  15320258 gactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaacccggtattccccgg 15320179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 28572246 - 28572325
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| |  |||||||||| |||||| ||||||| |||||||||| |||||||||||    
T  28572246 gactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtattccccgg 28572325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 8362649 - 8362571
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccg 87  Q
    ||||||| || ||||||| ||||||||| || |||||||||  |||||| || |||| ||| |||||||||||||||||    
T  8362649 gactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtattccccg 8362571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 10855437 - 10855383
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtatt 82  Q
    ||||||||| || |||||||||| |||||||||| |||||||| |||||||||||    
T  10855437 tagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatt 10855383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 11025438 - 11025484
Alignment:
Q  40 gcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    |||||||||||||||||| ||||| | ||||||||| ||||||||||    
T  11025438 gcactggccaagtgttgtccccctcggaatcgaacctggtattcccc 11025484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 19873419 - 19873361
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 87  Q
    ||||||||| |||||||||||||  ||||||| |||| |||| |||| |||||||||||    
T  19873419 tagaggcatgcgcactggccaagcattgttcctctgggaatcaaacctggtattccccg 19873361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 41630547 - 41630620
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtatt 82  Q
    |||||||| | ||||||  ||||||||| |||||||| |||| |||||||||| ||| ||| ||||||||||||    
T  41630547 gactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaacccggtatt 41630620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 54237509 - 54237440
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||| ||| ||||||| ||||||||||||| ||||| ||||||| |||| |||| ||||||    
T  54237509 ctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcgaccccgatatttcccgga 54237440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 3755642 - 3755562
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||| ||| |||||||| |||  |||||||| ||||| |||||||  ||||||||||||||    
T  3755642 gactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccgga 3755562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 7612990 - 7613038
Alignment:
Q  39 cgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||| |||||| |||||||||| ||| ||||||||||||||||||||    
T  7612990 cgcactagccaagcgttgttccccctgggaatcgaacccggtattcccc 7613038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 28242350 - 28242270
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||||||  |||||||||||   ||||||| ||||| |||| |||||||||||| |||||    
T  28242350 gactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccgga 28242270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 31072931 - 31072871
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||||  |||||| ||||| |||||||||| ||||||||||||| ||||||| ||||    
T  31072931 tagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattctccgg 31072871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 35923658 - 35923710
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    |||||||  ||||| ||||||||||||| ||||||||||||  ||||||||||    
T  35923658 gactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttcccc 35923710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 52364854 - 52364914
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| |||||||| |||| ||||||||  |||| |||||||| |||||||||||||    
T  52364854 tagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgg 52364914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 48804758 - 48804678
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  48804758 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccgga 48804678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 13095933 - 13095854
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||    
T  13095933 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgg 13095854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 10047921 - 10047990
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||| | |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  10047921 ctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 10047990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 43925576 - 43925508
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  43925576 ctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgg 43925508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 10317780 - 10317858
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||||| || |||| ||||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||    
T  10317780 gactaatctg-cttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaacccggtattccccgg 10317858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 18785732 - 18785665
Alignment:
Q  22 tcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||| ||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  18785732 tcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgg 18785665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 38578901 - 38578980
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||| ||||||| ||||||||||| ||||||||||    
T  38578901 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattccccgg 38578980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 4195238 - 4195316
Alignment:
Q  12 ctaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||| | ||||||| ||||||||| |||||| ||||| ||||||||| |||||||||||||| ||||||||||||||    
T  4195238 ctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccgga 4195316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 36619288 - 36619365
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| | |||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  36619288 gactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattcccc 36619365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 43862006 - 43862083
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| ||||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  43862006 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattcccc 43862083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 21190814 - 21190894
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||||||||| ||| ||||||||| |||||| |||||| |||| ||| ||| | |||||||||||||||||||||||    
T  21190814 gactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaacccggtattccccgga 21190894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 47341932 - 47341872
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||||||||    
T  47341932 tagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgg 47341872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 17748435 - 17748494
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  17748435 tagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccg 17748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 34659301 - 34659222
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| |||||||| |||| ||||||||||| || ||||||||||||||||||||||    
T  34659301 gactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgg 34659222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 22974042 - 22973964
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||||| ||||||| |||| |||| | ||||||||||| |||||| ||||||  |||||||||||||||||||||    
T  22974042 gactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccg 22973964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 27028335 - 27028281
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 82  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||    
T  27028335 tagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatt 27028281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 22573876 - 22573811
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    ||||||| || |||||| |||||||| ||| ||||||||||||| |||||||||||| ||||||||    
T  22573876 ctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaacccgatattcccc 22573811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 24969379 - 24969431
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 82  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  24969379 tagaggcacgcgcactggccaagtgttgtt-ccctggaaatcgaacccggtatt 24969431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 27875122 - 27875199
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||  ||||||||| |||||||||  |||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  27875122 gactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattcccc 27875199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 30827367 - 30827291
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||||||| || |||||||||||||||||| ||||| |||||||||| |||||||||    
T  30827367 gactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattccc 30827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 1606016 - 1605937
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | |||| || |||||||||  |||||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  1606016 gactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaaccaggtattctccgg 1605937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 26423321 - 26423396
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    |||||||||| ||| ||| ||||||||   |||||||||||| |||||| ||||||| ||||||||||||||||||    
T  26423321 gactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattcc 26423396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 43346832 - 43346890
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcccc 86  Q
    ||||||||| ||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  43346832 tagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattcccc 43346890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 1797516 - 1797455
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||| ||| ||||||||||||| |||||| ||||||| |||||||||||||||||| ||||    
T  1797516 tagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcgga 1797455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 45697234 - 45697303
Alignment:
Q  20 actcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| ||||||||| |||||||  |||||||||||||||||  ||||||| | | |||||||||||    
T  45697234 actcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgagaatcgaatctgatattccccgga 45697303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 14650381 - 14650313
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||| |||||||||| ||||||| ||||  ||||||| ||||||||||||||||| ||||| ||||    
T  14650381 ctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaacccgatattctccgg 14650313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 22268092 - 22268140
Alignment:
Q  39 cgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  22268092 cgcactggccaaatgttgttccccctgggaatcgaacccggtattcccc 22268140  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 3353499 - 3353424
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||||||| |||||||||||| ||||||| |||||  |||||| |||| |||||||    
T  3353499 gactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatcccgatattccc 3353424  T

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Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 16802198 - 16802119
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||||||||||||||||  |||||||| |||   ||||||| ||||||||||||||    
T  16802198 gactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgg 16802119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 5039452 - 5039530
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| |||||| ||  |||||| |||||||||||||| ||| | |||||||| ||||||||||||    
T  5039452 gactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccg 5039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 45960037 - 45960115
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||| | || |||| ||||||||| ||||||| |||||||||||| ||| ||| |||| ||| ||||||||||||    
T  45960037 gactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattccccg 45960115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 14535347 - 14535290
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 85  Q
    ||||||||| | ||||||||||||||||||| ||||| ||||  ||||||||||||||    
T  14535347 tagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattccc 14535290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 32823318 - 32823253
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaac 74  Q
    |||||||| | ||| ||| ||||||||||| ||| |||||||||||||| ||||||| ||||||||    
T  32823318 gactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 39475015 - 39474938
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| |||||| || ||||||| ||||| |||||||||| | | ||||||||||||||| ||||    
T  39475015 gactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaacccggtatacccc 39474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 45448045 - 45447972
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtatt 82  Q
    |||||||||||||  ||  |||||| || |||||| |||||| ||||||| |||||||||||||||| ||||||    
T  45448045 gactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtatt 45447972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 48244390 - 48244467
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctg-gaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| |||||||| ||||||||  ||||  ||||||||||  ||||| ||||||||||||||||    
T  48244390 gactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaacccggtattcccc 48244467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 4228788 - 4228865
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||| |||||  |||||||||||  ||||||||  ||||||||||||| |||||||| ||||    
T  4228788 gactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgttcc--tggaaatcgaacctggtattcctcgga 4228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 5069868 - 5069928
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| | |||| || ||| |||||||| |||||||||||||||||||||| |||||    
T  5069868 tagaggcatgcacactagctaagcgttgttcctcctggaaatcgaacccggtatttcccgg 5069928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 22993420 - 22993480
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| | ||||||||||| |||||||| ||| | ||||||||||| ||||||||||    
T  22993420 tagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccgatattccccgg 22993480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 49142704 - 49142780
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    ||||||| | ||| ||| |||||||||  |||||||| ||| |||||||||| | | ||||||||||||||||||||    
T  49142704 actaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtattcccc 49142780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 1446903 - 1446823
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  1446903 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 1446823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 29895864 - 29895784
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  29895864 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 29895784  T

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Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 42722413 - 42722491
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  42722413 gactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcccctgggaatcaaacccggtattccccgg 42722491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 3159503 - 3159583
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||    
T  3159503 gactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattctccgga 3159583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 40272369 - 40272445
Alignment:
Q  14 aatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||| |||| |||| ||||||||| ||||||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  40272369 aatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccgga 40272445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 20421847 - 20421784
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacc 75  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||    
T  20421847 taatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacc 20421784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 6779288 - 6779214
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 83  Q
    |||||||| | ||||||| ||||||||| ||||||||||| |||||||| ||||||| |||||||||||||||||    
T  6779288 gactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattc 6779214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 48834734 - 48834807
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 83  Q
    |||||||| ||||||||  |||||||||  ||||||||| ||| || |||||||||||||||||||||||||||    
T  48834734 gactaatccgactcatgtatagaggcatgtgcactggcctagtattattcccctggaaatcgaacccggtattc 48834807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 3574480 - 3574556
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 85  Q
    |||||||| ||||| ||| ||||||||| ||||||||||||||||||||| |||||| ||| |||| ||||||||||    
T  3574480 gactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccc 3574556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 8889099 - 8889019
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||| ||| ||||||| |||||||||||| ||||| | |||||||||||||||||||||||    
T  8889099 gactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtattccccgga 8889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 20532454 - 20532522
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| ||||||||||||| |||||||| |||||||||||||| |||||||| ||||    
T  20532454 ctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgg 20532522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 53599126 - 53599058
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| ||||||||||||  |||||||| ||||| ||||||||||||||||||||||    
T  53599126 ctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgg 53599058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 55921092 - 55921032
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  55921092 tagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgg 55921032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 7246680 - 7246759
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| ||||||||| || | |||||||||| |||||||||||    
T  7246680 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattccccgg 7246759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 42722611 - 42722690
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||||| ||||| ||| |||||||||||| |||||    
T  42722611 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcccgg 42722690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 47078535 - 47078456
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| |||||||||  |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  47078535 gactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgg 47078456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 16645195 - 16645117
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccg 87  Q
    |||||||| ||||||||  ||||||||| | ||||||||||| |||||||  |||| ||||||||||||||||||||||    
T  16645195 gactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaacccggtattccccg 16645117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36262801 - 36262878
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| ||||| ||| |||||||||  |||||||||||| |||||| |||||| ||||||||||||||||| ||||    
T  36262801 gactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt-ccctgggaatcgaacccggtattctccgg 36262878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 10541090 - 10541018
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||| ||| ||| ||||||||| | ||||||||||| |||||| ||||||||||||||||||| ||||||    
T  10541090 taatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 46108768 - 46108691
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||||||| ||||||||| |||||| ||||| ||||||||||||||  ||  ||||||||||| ||||||    
T  46108768 gactaatctggctcatgcgtagaggcatgcgcactagccaaatgttgttcccctggtgat--aacccggtatttcccgga 46108691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 295567 - 295646
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||||  || ||| ||||||||| ||||||||||||  |||||||| |||| ||||||| | |||||||||||||    
T  295567 gactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcctctgggaatcgaatctggtattccccgga 295646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 16450377 - 16450310
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaaccc 76  Q
    |||||||||| ||||||| |||||||||  |||||||||||| |||||| ||||||| ||||||||||    
T  16450377 gactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 36145249 - 36145328
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||  ||||||||| |||||||  |||| |||||| ||||||| ||||||||||||||||||||||    
T  36145249 gactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgg 36145328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 38075499 - 38075436
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattc 83  Q
    ||||||| ||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||    
T  38075499 ctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattc 38075436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 41339429 - 41339508
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||||| ||||||||||| |||||||||| ||| | ||||||||||||||| ||||    
T  41339429 gactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgg 41339508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 43468424 - 43468345
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| |||||  ||  |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  43468424 gactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgg 43468345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 2559365 - 2559307
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 86  Q
    ||||||||| ||||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  2559365 tagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattcccc 2559307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 24166527 - 24166449
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccg 87  Q
    |||||||||| ||| ||| ||||||||| ||||||||||||  |||| ||||| ||| |||||||||| ||||||||||    
T  24166527 gactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccg 24166449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 48015108 - 48015182
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcc 84  Q
    ||||||| | ||| ||| ||||||| | ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  48015108 actaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcc 48015182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 27248503 - 27248425
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||| ||| ||||||||| |||  |||||||| |||||||| ||||| | |||||||||||||||||||||    
T  27248503 gactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattccccgga 27248425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 33647798 - 33647721
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 86  Q
    ||||||||||  || ||| |||||| ||  ||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  33647798 gactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattcccc 33647721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 40780895 - 40780968
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtatt 82  Q
    |||||||| | ||||||| ||||||||| ||||||| ||||| ||||||||||| || ||||||||||| ||||    
T  40780895 gactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaacccgatatt 40780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 41162947 - 41162996
Alignment:
Q  41 cactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 89  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| ||||||    
T  41162947 cactggccaagtgttgttccctctggaaatcgaactcggtatttcccgga 41162996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 52950159 - 52950082
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    ||||||||||  |||||  ||||| ||| ||||||||||||| |||||| ||||||| ||||||||||| ||||||||    
T  52950159 gactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattcccc 52950082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 5472882 - 5472962
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||| ||||||||  |||| |||| |||||||||||||    
T  5472882 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccgga 5472962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 14124074 - 14124018
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||||| |||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  14124074 tagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcc 14124018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 15839969 - 15840045
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| ||||||||||||  ||| |||  || | ||||||||||||||||||||    
T  15839969 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattcttctaggaatcgaacccggtattcccc 15840045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 17080120 - 17080068
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| ||||||||||    
T  17080120 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccc 17080068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 24850672 - 24850740
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||  ||| ||| | |||||| ||||||    
T  24850672 ctcatgcgtagaggcatgcgcactggtcaagtgttgttcccctgataattgaatctggtatttcccgga 24850740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 38166104 - 38166024
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||| ||| ||||||||||||| |||||| ||||||| |||| ||||| ||||||||||||    
T  38166104 gactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattccccgga 38166024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 17946565 - 17946490
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    ||||||||||||||||  |||| |||| |||||||| ||||  ||||||||||| |||||||| | | ||||||||    
T  17946565 actaatctgactcatgtgtagaagcatgcgcactggtcaagaattgttcccctgaaaatcgaatctgctattcccc 17946490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 26479994 - 26480060
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattcccc 86  Q
    ||||||| ||||||||| || |||||||||||||| |||||||  | |||||||| |||||||||||    
T  26479994 ctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattcccc 26480060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 29588812 - 29588734
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| | ||| ||| ||||||||| |||||| ||||||  ||||| ||||||| |||||||||||||||| |||||    
T  29588812 actaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgg 29588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 15732501 - 15732562
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||||  ||||||||||||||||||||||| |   ||||||||||||||||| |||||    
T  15732501 tagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccgga 15732562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 15829776 - 15829715
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatc 70  Q
    |||||||| | ||||||| |||| |||| |||||||||||||||||| |||||||| |||||    
T  15829776 gactaatccggctcatgcctagaagcatgcgcactggccaagtgttgattcccctgaaaatc 15829715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 49260699 - 49260752
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccct 63  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||||||||||    
T  49260699 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccct 49260752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 3507328 - 3507268
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||  |||||| |||||| ||||||||| ||| ||||||||||| ||||| |||||    
T  3507328 tagaggcacgcgcactagccaagcgttgttcccttgggaatcgaacccgatattctccgga 3507268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 6862282 - 6862222
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    ||||| ||| ||||||| |||||| || |||| | || |||||||||||||||||||||||    
T  6862282 tagagacatgcgcactgaccaagtattattccacagggaatcgaacccggtattccccgga 6862222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 20128386 - 20128306
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||  ||| ||| || |||||| |||||||||||||  ||||| ||||||  |||||||||| ||||||||||||    
T  20128386 gactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccgga 20128306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 21429378 - 21429298
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||| |||||||| ||| ||||||||| ||||||||| ||  |||||||||| |  |||||||||||| |||||| ||||    
T  21429378 gactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccgatattcctcgga 21429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 49078187 - 49078107
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  49078187 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccgga 49078107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 10422861 - 10422783
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  10422861 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccg 10422783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 47312934 - 47313010
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    |||||||||| ||||||| ||||||||||||||||||||||  ||||||||||| | |||| |||||||||||||||    
T  47312934 gactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcccctaggaatcaaacccggtattcccc 47313010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 11397924 - 11398003
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| ||||||||| |||||||||||||| |||||||  ||||||||||| | ||||||||||||||||| |||||    
T  11397924 gactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaacccggtattctccgga 11398003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 5855595 - 5855517
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||    
T  5855595 gactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccg 5855517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 41663902 - 41663971
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  41663902 ctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgga 41663971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 2980966 - 2981046
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 89  Q
    |||||||| ||||| ||| ||||||||| | ||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  2980966 gactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccgga 2981046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 18915940 - 18915861
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  18915940 gactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 18915861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 34334353 - 34334410
Alignment:
Q  33 ggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgga 34334410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 26325885 - 26325805
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| ||||||| ||||||||||||||| |||| ||||||||||| |||||| ||||    
T  26325885 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcgga 26325805  T

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Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 32142892 - 32142956
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||| || |||||| |||||||||||||||||||| |||||| |||||||||||||||||||    
T  32142892 ctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattcc 32142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 48798105 - 48798185
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||| | |||| |||||||||| ||||||||||||||| |||||||||||    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccgga 48798185  T

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Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 8764064 - 8763985
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| |||||||||||||||||||| ||||||| || |||||||| ||||||||||    
T  8764064 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgg 8763985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 16263604 - 16263541
Alignment:
Q  24 atgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 86  Q
    |||| ||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  16263604 atgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattcccc 16263541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 26660211 - 26660133
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||||||| || ||||  ||| ||||||||||| |||||||||||||||||||||||||    
T  26660211 gactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccg 26660133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 9659214 - 9659291
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| || |||||| |||||| | |||  ||||||||||||| |||||||||||||||||||||    
T  9659214 gactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaacccggtattccccg 9659291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 17642039 - 17642112
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 82  Q
    |||||||| | ||| ||| ||||||||| |||||||||||||||||||| ||||||| |||||||||| |||||    
T  17642039 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatt 17642112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 50503415 - 50503476
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||| |||||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  50503415 tagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattccccgga 50503476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 28324615 - 28324691
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||||||| ||||||||| ||||||| |||||||||| |||||| || ||||||||||| |||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccc 28324691  T

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Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 33004050 - 33004130
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||||||| |||||||||||||  ||||| ||||||||||||||| ||| |||||||||||    
T  33004050 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaatccgatattccccgga 33004130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 18708575 - 18708650
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattcc 84  Q
    |||||||||| ||||||  ||||||||| |||||| ||||||  ||| |||||||||||||||||||| |||||||    
T  18708575 gactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaacccagtattcc 18708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 21849240 - 21849307
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccg 77  Q
    |||||||| | ||| ||| ||||||||| |||||| |||||| ||||||||||||| |||||||||||    
T  21849240 gactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 34878044 - 34877985
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 87  Q
    ||||||||| |||||||||||||||||||||| ||| | ||||||||| |||||||||||    
T  34878044 tagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccg 34877985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 43959856 - 43959935
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||||| ||||||| ||| ||||||| ||||||||||    
T  43959856 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaacccgatattccccgg 43959935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 14254303 - 14254381
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| || |||||| || |||||||||| |||||||||| || ||||||||| ||||||||||||    
T  14254303 gactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccg 14254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 10336578 - 10336509
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| |||||||| |||| |||||||||| || |||||||||||| ||||| |||||    
T  10336578 ctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccgga 10336509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 15466034 - 15465961
Alignment:
Q  14 aatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||| ||||| ||| |||||||||  |||||| ||||| |||||||||| ||||||||||||| ||||||||||    
T  15466034 aatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattcccc 15465961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 25165454 - 25165397
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    ||||||||| |||||||||  |||||||||||||||  ||||||| ||||||||||||    
T  25165454 tagaggcatgcgcactggcagagtgttgttcccctgataatcgaatccggtattcccc 25165397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 30927762 - 30927835
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtatt 82  Q
    |||||||| | ||||||| ||||||||| | || |||||||| ||||||||| |||||||||||||||| ||||    
T  30927762 gactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatt 30927835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 33498874 - 33498947
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtatt 82  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||| ||| ||||  ||||||||||||||||    
T  33498874 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatt 33498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 34719849 - 34719772
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcccc 86  Q
    |||||||||||||| ||| ||||||||| |||||||| |||| ||| |||||  ||| |||||||||| |||||||||    
T  34719849 gactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaacccagtattcccc 34719772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 37339893 - 37339813
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc--tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| | ||||||| ||||||||||||| ||||| ||||  ||| ||||||||||||||||||||||    
T  37339893 gactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcgaacccggtattccccgg 37339813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 2567347 - 2567275
Alignment:
Q  12 ctaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattc 83  Q
    |||||||||||| ||  ||||||||| ||||||||||||| |||| || ||| | ||||||||||||||||||    
T  2567347 ctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattc 2567275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 41696633 - 41696701
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgtt-gttcccctggaaatcgaacccg 77  Q
    ||||||||||| || ||| ||||||||||| |||||| ||||||||  | |||||||||||||||||||    
T  41696633 gactaatctgattcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcgaacccg 41696701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 45361917 - 45361993
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccc 85  Q
    |||||||| | || |||| ||| ||||| ||||||||||||| |||||||| ||||  |||||||||||||||||||    
T  45361917 gactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaacccggtattccc 45361993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 45536762 - 45536702
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||||  |||||||||||| |||||||||| | ||||||||||||||||||| ||||    
T  45536762 tagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgg 45536702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 40288531 - 40288590
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccg 87  Q
    ||||||||| |  |||||||||  |||||||||| |||||||||||||||||||||||||    
T  40288531 tagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattccccg 40288590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 42710187 - 42710246
Alignment:
Q  24 atgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtatt 82  Q
    |||| ||||||||| |||||||||||||| ||| |||||||| |||||||||||| ||||    
T  42710187 atgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatt 42710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 45726468 - 45726543
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcc 84  Q
    |||||||| | ||||||| ||||| |||||||||||||||| |||| |||| ||||  ||||||||| ||||||||    
T  45726468 gactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcc 45726543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 8905215 - 8905265
Alignment:
Q  39 cgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||||||| ||||||||||| ||||||| ||||| ||||| |||||    
T  8905215 cgcactggccaagcgttgttccccttgaaatcgtacccgatattctccgga 8905265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 34697408 - 34697330
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||||||| | |||| ||||||||||||| |||||   ||||||||| |||||||||||    
T  34697408 gactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccg 34697330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 13262156 - 13262079
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 86  Q
    |||||||| ||||| ||| ||||| ||| || | || ||||  ||||||| |||||||||||||||||||||||||||    
T  13262156 gactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattcccc 13262079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 35908831 - 35908754
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaa-gtgttgttcccc-tggaaatcgaacccggtattccc 85  Q
    |||||||| | ||||||| ||||||||| ||||||| |||| |||||||||||| |  |||||||| |||||||||||    
T  35908831 gactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtattccc 35908754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 17358507 - 17358583
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcccc 86  Q
    ||||||| | ||||||| || |||||| |||| ||| |||| ||||||| |||||  ||||||||||||||||||||    
T  17358507 actaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattcccc 17358583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 31152789 - 31152713
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgg-aaatcgaacccggtattccc 85  Q
    ||||||| |||||| ||  ||||||||  ||||||| ||||| ||| |||||| || ||||||||||||||||||||    
T  31152789 gactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccc 31152713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 32150968 - 32151032
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||| || |||||| ||||||| |||| ||||||| ||||||||||||||||| | ||||||    
T  32150968 ctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcc 32151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 44969737 - 44969665
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 82  Q
    |||||||| | ||||||| ||| ||||| | ||||||||||| ||||||| ||||  ||||||||| ||||||    
T  44969737 gactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttctcctgagaatcgaacctggtatt 44969665  T

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Target: scaffold0291 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 6930 - 6851
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  6930 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 6851  T

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Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 38897754 - 38897829
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    ||||||| | ||| ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38897754 actaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaacccggtattcccc 38897829  T

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Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 19572797 - 19572717
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  19572797 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccgga 19572717  T

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Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 28857190 - 28857122
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28857190 ctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 28857122  T

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Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 38369771 - 38369695
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||    
T  38369771 actaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttcccctgagaatcgaacccgatattccccg 38369695  T

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Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 1538493 - 1538426
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  1538493 ctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccg 1538426  T

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Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 5731954 - 5732033
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||||| ||||| | ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  5731954 gactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgg 5732033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 20525911 - 20525831
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| ||||||||| |||||||||||| ||||| ||||||||||| |||||||||||    
T  20525911 gactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccgga 20525831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 9805077 - 9805003
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 83  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||    
T  9805077 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 13664330 - 13664257
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccc 85  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||  ||||||| |||||||||||    
T  13664330 taatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccc 13664257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 42861263 - 42861332
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccct-ggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| |||||||||||||||||||| |||| |||||| ||||||| |||||||||||    
T  42861263 ctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccgga 42861332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 25417236 - 25417295
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||||| ||||||||||||| |||||| ||||||| |||||||||||||||||||||    
T  25417236 tagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccg 25417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 41163505 - 41163572
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||| |||  |||||||||||  ||||||||||||| ||||||||||||||||||||||    
T  41163505 ctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaacccggtattccccgg 41163572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 42086400 - 42086325
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 84  Q
    |||||||| | ||||||| ||||||||| |||||||| |||| |||||||||| ||| ||||||||||||||||||    
T  42086400 gactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcc 42086325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 15034147 - 15034069
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||||| | ||||||| ||||||||| | ||||| |||||||||||| ||| ||||||| ||||||||||||||||||    
T  15034147 actaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgg 15034069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 37263313 - 37263235
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| |||| |||||||| ||||||||||||  ||||||||||| ||||||||||    
T  37263313 gactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacccgatattccccgg 37263235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 30995194 - 30995117
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||| ||| |||||||||||||||| ||||||| ||||||||| ||||||||||    
T  30995194 gactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattcccc 30995117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 23383719 - 23383655
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||| ||||||||  ||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  23383719 ctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 35561852 - 35561932
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||||||  ||||||||| |||||||| || ||||||||||| |||||| |||||| || |||||||||||    
T  35561852 gactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccgga 35561932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 88
Target Start/End: Complemental strand, 1899050 - 1898995
Alignment:
Q  34 gcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgg 1898995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 2485269 - 2485194
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 85  Q
    |||||||| ||||||| | ||||||||| ||||| |||| || ||||||||||| | |||||||||| ||||||||    
T  2485269 gactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttcccctaggaatcgaacccagtattccc 2485194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 8513592 - 8513513
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||||| ||| ||| |||||||||  ||||||||||||  ||||| ||||| | ||||||||||||||||||||||    
T  8513592 gactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgg 8513513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 9168287 - 9168366
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||| || ||||||||||||| |||||||| |||| |||||  | ||||||||||||||    
T  9168287 gactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctctgggaatcgttctcggtattccccgga 9168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 40117477 - 40117410
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||  || |||||||||    
T  40117477 ctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaattcgatattccccg 40117410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 14588651 - 14588728
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||||||| ||||||||| |||||||| |||| ||| |||| |||| |||||||||||| ||||||||    
T  14588651 gactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattcccc 14588728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 18136333 - 18136394
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||||||| | ||||| |||||||||||||||| ||| ||||||||||||||||| |||||    
T  18136333 tagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccgga 18136394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 20255442 - 20255393
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc 59  Q
    |||||||| ||||||||| ||||||||| |||||||| ||||||||||||    
T  20255442 gactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttc 20255393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 30349641 - 30349572
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| ||||||||||||   ||||||||| | |||||| ||||||||||||||||||    
T  30349641 ctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccgga 30349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 40060340 - 40060295
Alignment:
Q  39 cgcactggccaagtgttgtt-cccctggaaatcgaacccggtattc 83  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  40060340 cgcactggccaagtgttgttccccctgaaaatcgaacccggtattc 40060295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 14974358 - 14974438
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||||||  ||||||||||| ||||||||||||  | ||||||||||| ||||| |||||    
T  14974358 gactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccgga 14974438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 20682670 - 20682730
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| ||||||||||||| |||||| |||||||||||| |||||  ||||||||||    
T  20682670 tagaggcatgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgg 20682730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 22295297 - 22295237
Alignment:
Q  2 agataagagactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    ||||||| ||||||||  |||||||| ||||||||| |||||||||||||| || ||||||    
T  22295297 agataagcgactaatccaactcatgcgtagaggcatgcgcactggccaagtattattcccc 22295237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 39099813 - 39099865
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    |||||||| | ||||||| |||||||||  |||||||||||||||||||||||    
T  39099813 gactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttcccc 39099865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 7308398 - 7308473
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcc 84  Q
    |||||||| | ||||||| |||||||||  |||||| ||||| |||||||||| ||| ||||||||||| ||||||    
T  7308398 gactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcc 7308473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 9812933 - 9812866
Alignment:
Q  22 tcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||| |||| |||| | ||||||||||| |||||||| ||| | ||||||||||||||||||||||    
T  9812933 tcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattccccgg 9812866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12766204 - 12766125
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||||||  |||||| ||||||||| | |||||||||||  ||||||| |||   ||||||||||||||||||||||    
T  12766204 gactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaacccggtattccccgg 12766125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 16755105 - 16755054
Alignment:
Q  39 cgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||||||||||||||| | |||| ||||||||||| ||||||||||||    
T  16755105 cgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccgga 16755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 42291539 - 42291618
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| |||||||||  |||||||||||| ||||||| |||||| |||| |||||||||||| ||||    
T  42291539 gactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattctccgg 42291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 4016308 - 4016362
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 82  Q
    ||||||||| |||||||||||||||||||| ||||||  ||||||||||| ||||    
T  4016308 tagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatt 4016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 18294537 - 18294591
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 83  Q
    |||||| || ||||||| ||||| |||||||||||||| || |||||||||||||    
T  18294537 tagaggtatgcgcactgaccaagcgttgttcccctggatattgaacccggtattc 18294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 20156181 - 20156227
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgttc 59  Q
    ||||||||||||||| |||| |||| |||||| ||||||||||||||    
T  20156181 taatctgactcatgcatagatgcatgcgcactagccaagtgttgttc 20156227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 24653859 - 24653925
Alignment:
Q  24 atgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgga 89  Q
    |||| |||||| || ||||||| ||||||||||||| ||||| |||||||||||  |||||||||||    
T  24653859 atgcgtagaggtatgcgcactgaccaagtgttgttctccctgaaaatcgaaccctatattccccgga 24653925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 26077211 - 26077137
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcccc 86  Q
    ||||||| ||| ||| |||||||||  |||||||||||| ||||||||| |||| |||||||||  |||||||||    
T  26077211 taatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattcccc 26077137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 12081962 - 12081901
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||| |||| ||||||||||||| |||||| ||||||  |||||||||| ||||||||||||    
T  12081962 tagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccgga 12081901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 7866635 - 7866579
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcc 84  Q
    ||||||||| | ||||||||||| |||||||| ||| | ||||||||||||||||||    
T  7866635 tagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcc 7866579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 18262671 - 18262731
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||| || |||||||| |||| |||||||||| || |||| ||||||||||||||||||    
T  18262671 tagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtattccccgg 18262731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 39728441 - 39728381
Alignment:
Q  29 tagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| | |||||||||||||||| |||| |||  ||||||||| ||||||||||||    
T  39728441 tagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgg 39728381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 45521244 - 45521166
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  45521244 gactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaacccggtattccccgg 45521166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 2467152 - 2467232
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||| ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  2467152 gactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccgga 2467232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 14666105 - 14666185
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||  ||| ||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  14666105 gactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccgga 14666185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 15884590 - 15884666
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||    
T  15884590 gactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacccggtattcccc 15884666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 8141167 - 8141100
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  8141167 ctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccg 8141100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 33401833 - 33401911
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||| ||||||||| ||||||||| | |||||| ||||||||||| |||||| ||||||||||||||||||||||    
T  33401833 gactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccg 33401911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 3418547 - 3418624
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattcccc 86  Q
    |||||||||||||||||| |||| |||| |||||||||||||||||||||| |||  |||||||||||| ||||||||    
T  3418547 gactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaacccgatattcccc 3418624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 9860029 - 9860106
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||||| ||||||  ||||||||| | |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  9860029 gactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattcccc 9860106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 6100548 - 6100468
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||| ||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  6100548 gactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgga 6100468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10927682 - 10927603
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||||| ||| | ||||||||||||||||||||||    
T  10927682 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgg 10927603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 4479341 - 4479403
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 83  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  4479341 ctcatgcgtagaggcatgcgcactggccaagcgttgttcccctgggaatcgaatccggtattc 4479403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 14846651 - 14846573
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    |||| ||||||||||||| ||||||||| ||||||| ||||   |||||||||||  ||||||||||||||||||||||    
T  14846651 gacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttcccctgagaatcgaacccggtattccccgg 14846573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 6042897 - 6042818
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| |  |||||| ||||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  6042897 gactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattccccgg 6042818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 33935769 - 33935844
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattcc 84  Q
    |||||||| ||||||||| || |||||| ||||||||||||||||||||| |||| | ||||||| ||||||||||    
T  33935769 gactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcc 33935844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 1013022 - 1013091
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    ||||||| |||||||||  | |||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  1013022 ctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccgga 1013091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 38922470 - 38922527
Alignment:
Q  32 aggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 88  Q
    |||||| ||||||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  38922470 aggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgg 38922527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 583888 - 583817
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 82  Q
    |||||||| ||||||||| ||||||||| |||||||| |||| |||||||||  |||| ||||||||||||||    
T  583888 gactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttccctaggaa-tcgaacccggtatt 583817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 36662461 - 36662406
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcc 84  Q
    ||||||||| ||||||||| |||| ||||||||||| |||||||||||| ||||||    
T  36662461 tagaggcatgcgcactggctaagtattgttcccctgaaaatcgaacccgatattcc 36662406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 43497658 - 43497705
Alignment:
Q  40 gcactggccaagtgttgttcccctggaaatcgaacccggtattccccg 87  Q
    |||||| |||||||||||||||||| |||||||| |||||||||||||    
T  43497658 gcactgaccaagtgttgttcccctgaaaatcgaagccggtattccccg 43497705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 24837303 - 24837239
Alignment:
Q  25 tgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccccgg 88  Q
    |||||||||||||   ||||||||||| ||||||| |||||| |||||||| |||||||||||||    
T  24837303 tgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattccccgg 24837239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 11785988 - 11785913
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||| ||||||||| | ||||| ||||  |||| |||||| | ||||||| ||||||||||||||    
T  11785988 taatctggctcatgcgtagaggcatgcacactgcccaaacgttgctccccttggaatcgaatccggtattccccgg 11785913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 17981508 - 17981438
Alignment:
Q  19 gactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||| ||| ||||||||| | |||||| |||| |||||||||| ||| |||||||||||||||| |||||    
T  17981508 gactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgg 17981438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 11298312 - 11298352
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttccc 61  Q
    ||||||| ||||||||| ||||||||| |||||||||||||    
T  11298312 ctcatgcatagaggcatgcgcactggctaagtgttgttccc 11298352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 26571000 - 26570948
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    |||||||| | ||||||| |||| |||||| ||||||||||| ||||||||||    
T  26571000 gactaatccggctcatgcgtagatgcatacacactggccaagcgttgttcccc 26570948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 44031505 - 44031553
Alignment:
Q  41 cactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  44031505 cactggccaagcgttgttccccctggaaatcgaacccgatatttcccgg 44031553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 44893331 - 44893391
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||||||| | |||||||||||  ||||||||| | ||||| ||||||||||||||||||    
T  44893331 tagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgg 44893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 13036038 - 13036116
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  13036038 gactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccg 13036116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 5253268 - 5253336
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5253268 ctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 5253336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 21898724 - 21898644
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  21898724 gactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgga 21898644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 29333184 - 29333248
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccc 85  Q
    ||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  29333184 ctcatgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaacccggtattccc 29333248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 29444800 - 29444878
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| | ||||||| ||||||||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||||||    
T  29444800 actaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatcccccgg 29444878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 8932726 - 8932657
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  8932726 ctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccgga 8932657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 8944192 - 8944123
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||| ||||||||||| |||||||||||    
T  8944192 ctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatattccccgga 8944123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 6606131 - 6606211
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| |||||||||   |||||||||||||||||| ||||||  |||||||||||||||||||||||    
T  6606131 gactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattccccgga 6606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 10311503 - 10311583
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccccgga 89  Q
    ||||||||| |||| ||| ||||| ||| ||||||||||||| ||||||||||| ||  ||||||||||||||||||||||    
T  10311503 gactaatctaactcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccgga 10311583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 14107392 - 14107470
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| |||||||||  ||||||| |||| |||||||| ||||| |||||||||||||||||||||    
T  14107392 gactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccg 14107470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 12606506 - 12606426
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||  |||||| ||||||||||||||| | |||||||||||||    
T  12606506 gactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaatctggtattccccgga 12606426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 3587991 - 3588059
Alignment:
Q  22 tcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||| |||||| ||  |||||||||||| |||||||||| ||| ||||||||||||||||| |||||    
T  3587991 tcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattctccgga 3588059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 19089574 - 19089494
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||||||| | |||||||||||||||||| ||||||| |||| |||| |||||||| ||||    
T  19089574 gactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtattcctcgga 19089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 5333080 - 5333001
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||||||  ||||| ||| |||||||| ||||||||||||| | |  ||||||||| | |||||||||||    
T  5333080 gactaatctggctcatgtgtagagacatgcgcactggacaagtgttgttccgccgagaatcgaacctgatattccccgga 5333001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 32157201 - 32157252
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttccc 61  Q
    |||||||||| ||||||| |||||| || |||||||| ||||||||||||||    
T  32157201 gactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttccc 32157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 11142678 - 11142600
Alignment:
Q  11 actaatctgactcatgcttagaggcatacgcactggccaagtgttg-ttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||||||||||| ||||||||| |||||||| |||  |||| |||| |||  |||||||| ||||||| |||||    
T  11142678 actaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaactcggtatttcccgg 11142600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 21945354 - 21945312
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccct 63  Q
    ||||||| |||||||||||| |||||||||| |||||||||||    
T  21945354 ctcatgcatagaggcatacgaactggccaagcgttgttcccct 21945312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 8938776 - 8938707
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    ||||||| |||| || | |||||||| ||||||||||||| ||||| |||||||||  ||||||||||||    
T  8938776 ctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccgga 8938707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 9147377 - 9147300
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||||| | || |||| |||||||||  ||||||| ||||||| ||||||| ||| ||||||||||| ||||||||    
T  9147377 gactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattcccc 9147300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 9179781 - 9179846
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccc 85  Q
    ||||||| |||||| || |  ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  9179781 ctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccc 9179846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 12635871 - 12635810
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||||| |||||| |||||| |||||| ||||||| |||| |||| |||||||||||||    
T  12635871 tagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaacctggtattccccgga 12635810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 13391362 - 13391289
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattc 83  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||   ||||||||||| |||||||| ||| |||||    
T  13391362 gactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatcgaatccgatattc 13391289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 34954653 - 34954730
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||||| ||||||| |||||| ||  |||||||||||  |||||| ||||||  ||||||||| ||||||||||    
T  34954653 gactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtattcccc 34954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 3601138 - 3601082
Alignment:
Q  32 aggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||| ||||||||||||| |||||| ||||||  ||||||| |||||||||||||    
T  3601138 aggcatgcgcactggccaagcgttgttccccctgagaatcgaaaccggtattccccg 3601082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 6358185 - 6358265
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||||    
T  6358185 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccgga 6358265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 331573 - 331494
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| |||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  331573 gactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgg 331494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 33005820 - 33005749
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattcc 84  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||| ||  ||||||||||||||    
T  33005820 taatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttcccctgggaacagaacccggtattcc 33005749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 12864296 - 12864218
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccg 87  Q
    |||||||||| |||||||  |||||||| ||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  12864296 gactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattccccg 12864218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 34356267 - 34356201
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    ||||||| ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  34356267 ctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattcccc 34356201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 38962823 - 38962755
Alignment:
Q  22 tcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||| ||||||||| ||||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  38962823 tcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccgga 38962755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 41220696 - 41220628
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||| ||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  41220696 ctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgg 41220628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 2785004 - 2784925
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||||||||||| ||||||||| ||||||| |||| | ||||| ||||| ||||||||| ||||||||| ||||    
T  2785004 gactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtttccctgaaaatcgaactcggtattcctcgga 2784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 7787128 - 7787049
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  7787128 gactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgg 7787049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 12455382 - 12455303
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  12455382 gactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtattccccgg 12455303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 20612580 - 20612648
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc--cctggaaatcgaacccggtattccccg 87  Q
    ||||||| ||||||||| ||||||||||||||||||||||  ||||  |||||||||||||||||||||    
T  20612580 ctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccg 20612648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 45263720 - 45263781
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattccccgga 89  Q
    ||||||||| ||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  45263720 tagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgga 45263781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 2550940 - 2550860
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||| ||| ||||||||| |||||||||||| ||||| ||||||||||| |||||||||||    
T  2550940 gactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccgga 2550860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 8410203 - 8410124
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| ||||    
T  8410203 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgg 8410124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 10823132 - 10823053
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||||||| ||||| |||| |||||||||||||||||    
T  10823132 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtattccccgg 10823053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 38005474 - 38005395
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||  ||||||||| ||||||||||||| |||||||||| ||| |||||||||| |||||||||||    
T  38005474 gactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgg 38005395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 14169643 - 14169721
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccccg 87  Q
    |||||||| | ||||||| ||||| ||| |||||||| ||||||||||||||| ||| ||||||||||| |||||||||    
T  14169643 gactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattccccg 14169721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 34346324 - 34346398
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    ||||||||||||||| ||||||||| | |||||||||||||||||| ||||||  |||| ||||| |||||||||    
T  34346324 taatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaacccagtattcccc 34346398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 3643932 - 3644001
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    ||||||| ||||||||| ||||||||||||| |||||||| | | |||||| ||||||||||||||||||    
T  3643932 ctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccgga 3644001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 16325667 - 16325602
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaac 74  Q
    |||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||| ||||||||    
T  16325667 gactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 44139556 - 44139479
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||  ||||||||||||| |||||| ||||||| ||||||||||||||||||||    
T  44139556 gactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcccc 44139479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 7747346 - 7747266
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||||||| ||||||||| | ||||||||||  |||||||| ||| | |||||||||||||||||||||||    
T  7747346 gactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccgga 7747266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 28616413 - 28616493
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||||| ||| ||| ||||||||| ||||||| ||||||||| |||||| || |||||||||||| |||||| ||||    
T  28616413 gactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaacccgatattccgcgga 28616493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 41031940 - 41032016
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||||||| | |||||||||||||||||| ||||||| ||||||||||||| |||||    
T  41031940 gactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtgttccc 41032016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 35946810 - 35946731
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgga 89  Q
    |||||||| | ||| ||| ||||||||| | || |||||||| ||||||||||| | |||||||| ||||||||||||||    
T  35946810 gactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcccctaggaatcgaactcggtattccccgga 35946731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 18902564 - 18902642
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccg 87  Q
    |||||||||| ||| ||| ||||| ||  |||||||| |||| |||||||||| ||| |||||||||||||||||||||    
T  18902564 gactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccg 18902642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 28525489 - 28525554
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt--cccctggaaatcgaa 73  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||||||||||  |||||||||||||||    
T  28525489 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcgaa 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 10026650 - 10026723
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtatt 82  Q
    |||||||| | ||||||| ||||||||| ||||||||||||  |||||| ||||||  ||||||||||||||||    
T  10026650 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatt 10026723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 21286497 - 21286436
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgga 89  Q
    ||||||||| |||||||| |||| |||||| | ||||| |||||||||||||||||||||||    
T  21286497 tagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccgga 21286436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 25540438 - 25540515
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||||| ||||| | |||||||||| |||||||||    
T  25540438 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattcccc 25540515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 29422253 - 29422208
Alignment:
Q  44 tggccaagtgttgttccc-ctggaaatcgaacccggtattccccgg 88  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||    
T  29422253 tggccaagtgttgttccctctggaaatcgaacccagtattccccgg 29422208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 3811736 - 3811800
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttccc-ctggaaatcgaacccggtattcc 84  Q
    ||||||| ||||||||| |||| || ||||||||||||||| |||| ||||||||||| ||||||    
T  3811736 ctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatattcc 3811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 14853421 - 14853481
Alignment:
Q  30 agaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    |||||||||||||||||||||  |||||| |||||| |||||||| | |||||||||||||    
T  14853421 agaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccgga 14853481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 15079555 - 15079476
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    ||||||| || ||| ||| ||||| ||| | |||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  15079555 gactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgg 15079476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 15234095 - 15234174
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| |||  ||| ||||||||| |||||||| ||||||||||| ||||||  |||||||||  |||||||||||    
T  15234095 gactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgg 15234174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 22593206 - 22593128
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||| | ||||||| ||||||||| ||||||||||||  |||||| ||||||| |||||||| | |||||||||||    
T  22593206 gactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgg 22593128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 39806919 - 39806998
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccct-ggaaatcgaacccggtattccccgg 88  Q
    |||||||| ||||| ||  ||||||||| ||||||||||||  |||||| | || || ||||||||||||||||||||||    
T  39806919 gactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgg 39806998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 21180348 - 21180422
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattc 83  Q
    |||||||| | ||| ||| |||||||||  |||||||||||||||||||| || ||| ||||||| |||||||||    
T  21180348 gactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattc 21180422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 25604656 - 25604594
Alignment:
Q  20 actcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 82  Q
    |||||||| ||||||||| |  ||||| |||  ||||||||||||||||||||| ||||||||    
T  25604656 actcatgcgtagaggcatgcatactggtcaaacgttgttcccctggaaatcgaatccggtatt 25604594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 40968963 - 40969025
Alignment:
Q  24 atgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggtattccc 85  Q
    |||| ||||||||| ||||||| ||||  ||||||  ||||||||||||||||||||||||||    
T  40968963 atgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccc 40969025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 24179640 - 24179575
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacc 75  Q
    |||||||| | ||||||| |||||||||  |||||||||||  ||||||||||||  |||||||||    
T  24179640 gactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcgaacc 24179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 29421345 - 29421285
Alignment:
Q  19 gactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggta 80  Q
    ||||||||| ||||||||| | ||||| ||||| ||||||||||| |||||| |||||||||    
T  29421345 gactcatgcgtagaggcatgctcactgcccaagcgttgttcccct-gaaatcaaacccggta 29421285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 10669661 - 10669593
Alignment:
Q  13 taatctgactcatgcttagaggcatacgcactggccaagtgttgttc-ccctggaaatcgaacccggta 80  Q
    ||||| ||||| ||| ||||| ||| ||||||||||||| ||||||| |||||| |||| |||||||||    
T  10669661 taatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 13026445 - 13026521
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccc 85  Q
    |||||||| | ||||||| ||||||||| ||||||||||||   ||||||| ||||  ||||||||||| |||||||    
T  13026445 gactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccc 13026521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 19976841 - 19976921
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgga 89  Q
    |||||||  |||| |||| ||||| ||| ||||||| ||||  ||| |||||| || ||||||||||||||||||||||||    
T  19976841 gactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccgga 19976921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 30721889 - 30721941
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc 62  Q
    |||||||| ||||||| | ||||| ||| ||||||| ||||||||||||||||    
T  30721889 gactaatccgactcatacgtagagacatgcgcactgaccaagtgttgttcccc 30721941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 6036 - 5969
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||| |||||||||  |||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  6036 ctcatgcgtagaggcatgtgcactggccaagcgttgtccccctggaaatcgaacccagtattccccgg 5969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 8230 - 8171
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| ||||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  8230 tagaggcatgcgcactggccaagcgttgttcccttgggaatcgaacccggtattccccgg 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 72707 - 72631
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccc 85  Q
    |||||||| | || |||||| ||||||| |||||||| |||| |||||||||| |||||||||||||||||||||||    
T  72707 gactaatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccc 72631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 9920 - 9845
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    |||||||| | ||| ||| ||||||||| ||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  9920 gactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcc 9845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 1648 - 1725
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    ||||||| || ||||||| ||||||||| ||||||||| ||  |||||||||| ||||||||||||| ||||||||||    
T  1648 gactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtattcccc 1725  T

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Target: scaffold0086 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 26258 - 26181
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcccc 86  Q
    |||||||| | ||| ||| ||||||||| | ||||||||||| |||||| |||||||||||||||||| |||||||||    
T  26258 gactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattcccc 26181  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 7883 - 7948
Alignment:
Q  24 atgcttagaggcatacgcactggccaagtgttgttcccc-tggaaatcgaacccggtattccccgg 88  Q
    |||| ||||||||| ||||||||||||||||| |||||| ||| |||| |||||||||||||||||    
T  7883 atgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattccccgg 7948  T

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Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 319486 - 319417
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgga 89  Q
    ||||||| |||||| || ||||||||||||| |||||| ||||| |||||| ||||||||||||||||||    
T  319486 ctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaacccggtattccccgga 319417  T

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Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 645 - 566
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattccccgg 88  Q
    |||||||||| ||||| | ||||||||| | |||||  ||||||||||| ||||||  ||||||||||||||||||||||    
T  645 gactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaacccggtattccccgg 566  T

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Target: scaffold0209 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 82
Target Start/End: Complemental strand, 12648 - 12577
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctggaaatcgaacccggtatt 82  Q
    |||||||| ||||||||| ||||||||| |||||||| |||| |||||||||  |||| ||||||||||||||    
T  12648 gactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttccctaggaa-tcgaacccggtatt 12577  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 8746 - 8810
Alignment:
Q  21 ctcatgcttagaggcatacgcactggccaagtgttgtt-cccctggaaatcgaacccggtattcc 84  Q
    ||||||| ||||||||  ||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  8746 ctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 8810  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 41119 - 41043
Alignment:
Q  10 gactaatctgactcatgcttagaggcatacgcactggccaagtgttgttcccctgga-aatcgaacccggtattccc 85  Q
    |||||||| | ||| ||| ||||||||| | ||||| ||||||||||||||||| || ||||||||||| |||||||    
T  41119 gactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccc 41043  T

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Target: scaffold0332 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 57 - 88
Target Start/End: Complemental strand, 15358 - 15327
Alignment:
Q  57 ttcccctggaaatcgaacccggtattccccgg 88  Q
    ||||||||||||||||||||||||||||||||    
T  15358 ttcccctggaaatcgaacccggtattccccgg 15327  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 9479 - 9434
Alignment:
Q  42 actggccaagtgttgttcccc-tggaaatcgaacccggtattcccc 86  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattcccc 9434  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 12726 - 12666
Alignment:
Q  29 tagaggcatacgcactggccaagtgttgttcc-cctggaaatcgaacccggtattccccgg 88  Q
    ||||||||| | ||||||||||| |||||||| |||   ||||||||||||||||||||||    
T  12726 tagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgg 12666  T

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