View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1247_low_39 (Length: 305)

Name: NF1247_low_39
Description: NF1247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1247_low_39
NF1247_low_39
[»] chr1 (22 HSPs)
chr1 (110-262)||(39776560-39776712)
chr1 (260-305)||(23536065-23536110)
chr1 (258-305)||(8224764-8224811)
chr1 (262-305)||(15034775-15034818)
chr1 (262-305)||(24273250-24273293)
chr1 (258-305)||(27935601-27935648)
chr1 (262-305)||(30190252-30190295)
chr1 (258-305)||(43623008-43623055)
chr1 (260-305)||(4038073-4038118)
chr1 (260-305)||(15034657-15034702)
chr1 (256-297)||(15245454-15245495)
chr1 (260-305)||(26501109-26501154)
chr1 (268-305)||(34756433-34756470)
chr1 (259-302)||(5474414-5474457)
chr1 (258-297)||(34007441-34007480)
chr1 (262-305)||(47165242-47165285)
chr1 (268-302)||(27804271-27804305)
chr1 (259-305)||(49659214-49659259)
chr1 (260-305)||(27804381-27804426)
chr1 (268-305)||(45565400-45565437)
chr1 (261-305)||(32287963-32288007)
chr1 (257-297)||(32572935-32572975)
[»] chr7 (23 HSPs)
chr7 (110-242)||(44207967-44208099)
chr7 (254-305)||(31632714-31632765)
chr7 (258-305)||(40110854-40110901)
chr7 (256-302)||(40854089-40854135)
chr7 (259-305)||(43955514-43955560)
chr7 (268-305)||(21636001-21636038)
chr7 (260-305)||(40110735-40110780)
chr7 (262-305)||(26162153-26162196)
chr7 (262-305)||(34398965-34399008)
chr7 (259-305)||(2057392-2057438)
chr7 (259-305)||(14603278-14603324)
chr7 (259-305)||(35776971-35777017)
chr7 (260-305)||(39342658-39342703)
chr7 (268-305)||(43955630-43955667)
chr7 (262-305)||(6498781-6498824)
chr7 (262-305)||(28539184-28539227)
chr7 (262-305)||(35455804-35455847)
chr7 (259-305)||(5644674-5644720)
chr7 (259-305)||(34388262-34388308)
chr7 (260-305)||(29065817-29065862)
chr7 (260-305)||(29639231-29639276)
chr7 (268-305)||(30629063-30629100)
chr7 (260-297)||(31913234-31913271)
[»] chr4 (20 HSPs)
chr4 (257-305)||(7352928-7352976)
chr4 (252-305)||(1112595-1112648)
chr4 (262-305)||(857355-857398)
chr4 (262-305)||(28845987-28846030)
chr4 (262-305)||(31473849-31473892)
chr4 (262-305)||(49111428-49111471)
chr4 (259-305)||(4896748-4896794)
chr4 (268-305)||(7352818-7352855)
chr4 (268-305)||(10633038-10633075)
chr4 (261-305)||(31742880-31742924)
chr4 (262-305)||(14982280-14982323)
chr4 (262-305)||(15660299-15660342)
chr4 (262-305)||(16516171-16516214)
chr4 (262-305)||(36455907-36455950)
chr4 (259-302)||(36456045-36456088)
chr4 (263-305)||(4441338-4441380)
chr4 (268-305)||(28845877-28845914)
chr4 (260-305)||(41498606-41498651)
chr4 (268-305)||(42542983-42543020)
chr4 (268-305)||(42844659-42844696)
[»] chr8 (26 HSPs)
chr8 (259-305)||(17110866-17110912)
chr8 (262-305)||(3853616-3853659)
chr8 (262-305)||(3858074-3858117)
chr8 (262-305)||(17110985-17111028)
chr8 (258-305)||(36103097-36103144)
chr8 (256-297)||(14799973-14800014)
chr8 (260-305)||(14991690-14991735)
chr8 (260-305)||(27322689-27322734)
chr8 (268-305)||(30435252-30435289)
chr8 (260-305)||(42711396-42711441)
chr8 (257-297)||(33377345-33377385)
chr8 (258-305)||(14235-14281)
chr8 (262-305)||(24044960-24045003)
chr8 (262-305)||(28324702-28324745)
chr8 (262-305)||(29257391-29257434)
chr8 (262-297)||(30435350-30435385)
chr8 (262-305)||(33902667-33902710)
chr8 (258-305)||(40046800-40046847)
chr8 (259-305)||(32626074-32626120)
chr8 (268-305)||(3853732-3853769)
chr8 (268-305)||(3858190-3858227)
chr8 (268-305)||(8689138-8689175)
chr8 (268-305)||(13404833-13404870)
chr8 (260-305)||(23011732-23011777)
chr8 (268-305)||(44346718-44346755)
chr8 (253-293)||(42711295-42711335)
[»] chr5 (34 HSPs)
chr5 (252-305)||(25935317-25935370)
chr5 (257-305)||(40643933-40643981)
chr5 (258-305)||(5658772-5658819)
chr5 (259-305)||(927299-927345)
chr5 (260-305)||(15374076-15374121)
chr5 (268-305)||(15804410-15804447)
chr5 (252-305)||(32470872-32470925)
chr5 (257-305)||(41762242-41762290)
chr5 (262-305)||(22303897-22303940)
chr5 (258-305)||(40809337-40809384)
chr5 (254-305)||(40809457-40809508)
chr5 (260-302)||(2316376-2316418)
chr5 (259-305)||(40090441-40090487)
chr5 (268-305)||(2721587-2721624)
chr5 (268-305)||(9894349-9894386)
chr5 (268-305)||(28828373-28828410)
chr5 (269-305)||(37145528-37145564)
chr5 (258-297)||(2550324-2550363)
chr5 (262-305)||(9764454-9764497)
chr5 (262-305)||(15804322-15804365)
chr5 (262-305)||(22766952-22766995)
chr5 (262-305)||(26281296-26281339)
chr5 (258-305)||(33245399-33245446)
chr5 (262-305)||(37722921-37722964)
chr5 (263-305)||(3563278-3563320)
chr5 (259-305)||(9764335-9764381)
chr5 (263-305)||(20523249-20523291)
chr5 (259-297)||(22305109-22305147)
chr5 (258-300)||(34982212-34982254)
chr5 (268-305)||(19533934-19533971)
chr5 (260-305)||(23092078-23092123)
chr5 (268-305)||(28828463-28828500)
chr5 (260-305)||(32250125-32250169)
chr5 (262-302)||(20523133-20523173)
[»] chr3 (21 HSPs)
chr3 (252-305)||(49457333-49457386)
chr3 (258-305)||(42005982-42006029)
chr3 (258-305)||(44436254-44436301)
chr3 (256-305)||(35279931-35279980)
chr3 (244-305)||(44692938-44692999)
chr3 (258-305)||(27252010-27252057)
chr3 (262-305)||(46672832-46672875)
chr3 (262-305)||(47767432-47767475)
chr3 (259-305)||(34088568-34088614)
chr3 (260-305)||(9129460-9129505)
chr3 (260-305)||(9137567-9137612)
chr3 (262-305)||(2732639-2732682)
chr3 (262-297)||(25655315-25655350)
chr3 (262-305)||(36398018-36398061)
chr3 (262-305)||(37054394-37054437)
chr3 (262-305)||(44692822-44692865)
chr3 (259-297)||(25655403-25655441)
chr3 (259-305)||(53129872-53129918)
chr3 (260-305)||(7302344-7302389)
chr3 (268-305)||(21307561-21307598)
chr3 (261-305)||(5415782-5415826)
[»] chr6 (13 HSPs)
chr6 (257-305)||(8574781-8574829)
chr6 (258-305)||(6919823-6919870)
chr6 (262-305)||(8574695-8574738)
chr6 (262-305)||(9285647-9285690)
chr6 (259-305)||(776196-776242)
chr6 (259-297)||(8475176-8475214)
chr6 (259-305)||(28918162-28918208)
chr6 (268-305)||(9763018-9763055)
chr6 (262-302)||(33733432-33733472)
chr6 (253-305)||(34245010-34245062)
chr6 (262-305)||(776080-776123)
chr6 (254-295)||(1195343-1195384)
chr6 (268-305)||(15299541-15299577)
[»] chr2 (24 HSPs)
chr2 (259-305)||(10480116-10480162)
chr2 (260-305)||(7228042-7228087)
chr2 (260-305)||(14365698-14365743)
chr2 (261-305)||(14537198-14537242)
chr2 (254-305)||(33189287-33189338)
chr2 (262-305)||(41461631-41461674)
chr2 (259-305)||(784790-784836)
chr2 (259-305)||(11684596-11684642)
chr2 (260-305)||(769034-769079)
chr2 (260-305)||(11141303-11141348)
chr2 (260-305)||(17180295-17180340)
chr2 (260-305)||(27033488-27033533)
chr2 (268-305)||(28740602-28740639)
chr2 (262-302)||(13017779-13017819)
chr2 (262-305)||(1583839-1583882)
chr2 (270-305)||(11716515-11716550)
chr2 (262-305)||(14365815-14365858)
chr2 (270-305)||(30698289-30698324)
chr2 (259-305)||(41461512-41461558)
chr2 (259-297)||(41585710-41585748)
chr2 (268-297)||(3345852-3345881)
chr2 (268-305)||(11793901-11793938)
chr2 (260-305)||(39630223-39630268)
chr2 (268-297)||(44205678-44205707)
[»] scaffold1562 (1 HSPs)
scaffold1562 (268-305)||(521-558)
[»] scaffold1158 (1 HSPs)
scaffold1158 (268-305)||(2035-2072)
[»] scaffold0009 (1 HSPs)
scaffold0009 (260-305)||(42094-42139)
[»] scaffold0048 (1 HSPs)
scaffold0048 (268-305)||(82949-82986)
[»] scaffold0039 (1 HSPs)
scaffold0039 (253-297)||(109040-109084)


Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 110 - 262
Target Start/End: Complemental strand, 39776712 - 39776560
Alignment:
Q  110 caggagtgttgccaaagtatttcaattcagagtggtcatttgctcagtttcgcttgcatgaacactgtcgttacactgttgcatttggtgaccaaaagaa 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776712 caggagtgttgccaaagtatttcaattcagagtggtcatttgctcagtttcacttgcatgaacactgtcgttacactgttgcatttggtgaccaaaagaa 39776613  T
Q  210 tacactcacaattcttggcatggatggaaggtaatattttagaaaaatcctaa 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39776612 tacactcacaattcttggcatggatggaaggtaatattttagaaaaatcctaa 39776560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 23536065 - 23536110
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 23536110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 8224764 - 8224811
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| |||||||||| || ||||||||||||||||||||||||    
T  8224764 cctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 8224811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 15034818 - 15034775
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 15034775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 24273293 - 24273250
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 24273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 27935648 - 27935601
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  27935648 cctaagagtgtgtttggatggagaaatattttgagggaatgtaatgtt 27935601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 30190295 - 30190252
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 30190252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 43623055 - 43623008
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||||    
T  43623055 cctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgtt 43623008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 4038073 - 4038118
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaatgtaatgtt 4038118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 15034657 - 15034702
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 15034702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 15245454 - 15245495
Alignment:
Q  256 atcctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  15245454 atcctaagagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 26501154 - 26501109
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||| | ||||||||||||||||||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 26501109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 34756433 - 34756470
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  34756433 tgtttggatgggggaatgttttgagggaatgtaatgtt 34756470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Original strand, 5474414 - 5474457
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    |||||||| ||||||||||||| |||||||||||||||| ||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 34007480 - 34007441
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  34007480 cctaagagtgtgtttggatggggaaatattttgagggaat 34007441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 47165285 - 47165242
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgtt 47165242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 302
Target Start/End: Original strand, 27804271 - 27804305
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||||||||||| |||||||||||||||||||||    
T  27804271 tgtttggatgggggaatgttttgagggaatgtaat 27804305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 49659214 - 49659259
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  49659214 ctaagagtgtgtttggatgggg-aatgtattgagggaatgtaatgtt 49659259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 27804426 - 27804381
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||| | |||||||||||| |||||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgaggaaatgtaatgtt 27804381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 45565400 - 45565437
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  45565400 tgtttggatgggggaatgttttgagagaatgtaatgtt 45565437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 32288007 - 32287963
Alignment:
Q  261 aagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| ||||||||||| | || |||||||||||||||||||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatgtt 32287963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 32572935 - 32572975
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||| ||||| ||||||||||||| ||||||||||||||||    
T  32572935 tccttagagtgtgtttggatgggggaatgttttgagggaat 32572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 44207967 - 44208099
Alignment:
Q  110 caggagtgttgccaaagtatttcaattcagagtggtcatttgctcagtttcgcttgcatgaacactgtcgttacactgttgcatttggtgaccaaaagaa 209  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||||      ||  ||||| ||||| |||||||  ||||||||    
T  44207967 caggagtgttgcccaagtatttcaattcagagtggtcagttgctcggtttcacttgcatgagggtactcagtacacagttgcttttggtgtacaaaagaa 44208066  T
Q  210 tacactcacaattcttggcatggatggaaggta 242  Q
    |||| ||| ||||||||||||||||||||||||    
T  44208067 tacagtcataattcttggcatggatggaaggta 44208099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 31632714 - 31632765
Alignment:
Q  254 aaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  31632714 aaattctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31632765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 40110901 - 40110854
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  40110901 cctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatgtt 40110854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 256 - 302
Target Start/End: Complemental strand, 40854135 - 40854089
Alignment:
Q  256 atcctaagagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  40854135 atcctaagagtgtgtttggatggggaaatgttctgagggaatgtaat 40854089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 43955514 - 43955560
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 43955560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 21636038 - 21636001
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||||||||||||||||||||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgtt 21636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 40110735 - 40110780
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 40110780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 26162196 - 26162153
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 26162153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 34399008 - 34398965
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 34398965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 2057392 - 2057438
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatgtt 2057438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 14603324 - 14603278
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  14603324 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 14603278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 35777017 - 35776971
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||    
T  35777017 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 35776971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 39342703 - 39342658
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 39342658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 43955667 - 43955630
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  43955667 tgtttggatgggggaatgttttgagggaatgtaatgtt 43955630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 6498824 - 6498781
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  6498824 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 6498781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 28539227 - 28539184
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  28539227 agagtgtgtttggatgggggaatgttttgagggaatgtattgtt 28539184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 35455804 - 35455847
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgtt 35455847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 5644674 - 5644720
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| |||||| |||| | ||||||||||||||||||||||||    
T  5644674 ctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgtt 5644720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 34388262 - 34388308
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||||||| |||||||| || ||||||||    
T  34388262 ctaagagtgtgtttggatggggaaatattttgaggaaaagtaatgtt 34388308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 29065817 - 29065862
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||||||   ||||||||||||||||||||||||    
T  29065817 taagagtgtgtttggatggatgaatgttttgagggaatgtaatgtt 29065862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 29639276 - 29639231
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||| ||||||||| |||||||| |||||||||||||||    
T  29639276 taagagtgtgtatggatgggggaatgttttcagggaatgtaatgtt 29639231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 30629063 - 30629100
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  30629063 tgtttggatgggggaatgttttgagggaatgtattgtt 30629100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 31913234 - 31913271
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 7352976 - 7352928
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7352976 tcctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgtt 7352928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 1112595 - 1112648
Alignment:
Q  252 aaaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  1112595 aaaaatcctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtt 1112648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 857398 - 857355
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  857398 agagtgtgtttggatggggaaatgttttgagggaatgtaatgtt 857355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 28846030 - 28845987
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgtt 28845987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 31473849 - 31473892
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 31473892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 49111471 - 49111428
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 49111428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 4896794 - 4896748
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  4896794 ctaatagtgtgtttggatggggaaatattttgagggaatgtaatgtt 4896748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 7352818 - 7352855
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  7352818 tgtttggatgggggaatgttttgagggaatgtaatgtt 7352855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 10633038 - 10633075
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  10633038 tgtttggatgggggaatgttttgagggaatgtaatgtt 10633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 305
Target Start/End: Complemental strand, 31742924 - 31742880
Alignment:
Q  261 aagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| ||||||||||| | ||||||||||||||||||||||||    
T  31742924 aagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 31742880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 14982280 - 14982323
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 14982323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 15660342 - 15660299
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| |||||||||| || ||||||||||||||||||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 15660299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 16516171 - 16516214
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgtt 16516214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 36455907 - 36455950
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgtt 36455950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 259 - 302
Target Start/End: Complemental strand, 36456088 - 36456045
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    |||||||| ||||||||||| | |||||||||||||||||||||    
T  36456088 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaat 36456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 4441338 - 4441380
Alignment:
Q  263 gagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||||||||||| | ||||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgtt 4441380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 28845877 - 28845914
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  28845877 tgtttggatggaggaatgttttgagggaatgtaatgtt 28845914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 41498651 - 41498606
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||| | ||| ||||||||||||||||||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaatgtaatgtt 41498606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 42543020 - 42542983
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  42543020 tgtttggatggtggaatgttttgagggaatgtaatgtt 42542983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 42844696 - 42844659
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  42844696 tgtttggatggggaaatattttgaggtaatgtaatgtt 42844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 17110866 - 17110912
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgtt 17110912  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 3853616 - 3853659
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 3853659  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 3858074 - 3858117
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 3858117  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 17111028 - 17110985
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgtt 17110985  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 36103097 - 36103144
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  36103097 cctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 36103144  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 14799973 - 14800014
Alignment:
Q  256 atcctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||||| ||||||||||||| ||||||||||||||||    
T  14799973 atcctaagagtgtgtttggatgggggaatgttttgagggaat 14800014  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 14991690 - 14991735
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| |||||||||||| |||||||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatgtt 14991735  T

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Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 27322734 - 27322689
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaatgtaatgtt 27322689  T

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Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 30435252 - 30435289
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  30435252 tgtttggatggagaaatgttttgagggaatgtaatgtt 30435289  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 42711441 - 42711396
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||| ||| ||||||||||||||||||||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaatgtaatgtt 42711396  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 33377385 - 33377345
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  33377385 tcctaagagtgtgtttggatgggggaatgttttgagggaat 33377345  T

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Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 14235 - 14281
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  14235 cctaagagtgtgtttggatgggg-aatgtttggagggaatgtaatgtt 14281  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 24044960 - 24045003
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| |||||||||| || ||||||||||||||||||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 24045003  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 28324745 - 28324702
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  28324745 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 28324702  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 29257434 - 29257391
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgtt 29257391  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 297
Target Start/End: Complemental strand, 30435385 - 30435350
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||| ||||||||||||||||||||||||||||||    
T  30435385 agagtgtgtttggatggggaaatgttttgagggaat 30435350  T

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Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 33902667 - 33902710
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 33902710  T

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Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 40046800 - 40046847
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| |||||||||||   ||||||||||||||||||||||||    
T  40046800 cctaagagtgtgtttggatggatgaatgttttgagggaatgtaatgtt 40046847  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 32626120 - 32626074
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| || |||||||||| ||| ||||||||||||||||||||    
T  32626120 ctaagagtgtgcttggatgggggaatcttttgagggaatgtaatgtt 32626074  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 3853769 - 3853732
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  3853769 tgtttggatggggaaatattttgaggtaatgtaatgtt 3853732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 3858227 - 3858190
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  3858227 tgtttggatggggaaatattttgaggtaatgtaatgtt 3858190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 8689138 - 8689175
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  8689138 tgtttggatggagaaatgttttgaaggaatgtaatgtt 8689175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 13404833 - 13404870
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  13404833 tgtttggatggggaaatattttgaggtaatgtaatgtt 13404870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 23011732 - 23011777
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||| |||  ||||||||||||||||||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatgtt 23011777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 44346755 - 44346718
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  44346755 tgtttggatgggggaatgttttgagggaatgtattgtt 44346718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 42711295 - 42711335
Alignment:
Q  253 aaaatcctaagagtctgtttggatggggaaatgttttgagg 293  Q
    |||| ||| ||||| ||||||||||||||||||||||||||    
T  42711295 aaaaaccttagagtgtgtttggatggggaaatgttttgagg 42711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 25935370 - 25935317
Alignment:
Q  252 aaaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  25935370 aaaaattctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 25935317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 40643981 - 40643933
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  40643981 tcctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 40643933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 5658772 - 5658819
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  5658772 cctaagagtgtgtttggatggagaaatgttttgagggaatgtaatgtt 5658819  T

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Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 927299 - 927345
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||    
T  927299 ctaagagtgtgtttggatggggaaatgttttgagggaatgtattgtt 927345  T

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Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 15374121 - 15374076
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 15374076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 15804447 - 15804410
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15804447 tgtttggatggggaaatgttttgagggaatgtaatgtt 15804410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 32470872 - 32470925
Alignment:
Q  252 aaaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  32470872 aaaaagcctaagagtgtatttggatggagaaatgttttgagggaatgtaatgtt 32470925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 41762290 - 41762242
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  41762290 tcctaagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 41762242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 22303940 - 22303897
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 22303897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 40809337 - 40809384
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||    
T  40809337 cctaagagtgtgtttggatggggaaatgttttgagagaatataatgtt 40809384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 40809508 - 40809457
Alignment:
Q  254 aaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  40809508 aaatccttagagtgtgtttagatggggaaatgttttgagagaatgtaatgtt 40809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 2316376 - 2316418
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaatgtaat 2316418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 40090487 - 40090441
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||    
T  40090487 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtt 40090441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 2721624 - 2721587
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2721624 tgtttggatgggggaatgttttgagggaatgtaatgtt 2721587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 9894386 - 9894349
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9894386 tgtttggatgggggaatgttttgagggaatgtaatgtt 9894349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 28828373 - 28828410
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  28828373 tgtttggatgggggaatgttttgagggaatgtaatgtt 28828410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 37145564 - 37145528
Alignment:
Q  269 gtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||||||| ||||||||||||||||||||||||    
T  37145564 gtttggatgggggaatgttttgagggaatgtaatgtt 37145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 2550324 - 2550363
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  2550324 cctaagagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 9764497 - 9764454
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgtt 9764454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 15804322 - 15804365
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaatgtagtgtt 15804365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 22766952 - 22766995
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| |||||||||||||||| |||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgtt 22766995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 26281339 - 26281296
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| || |||||||||||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgtt 26281296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 33245446 - 33245399
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| |||| ||||||||||||| |||||||||| |||||||||||||    
T  33245446 cctatgagtgtgtttggatgggggaatgttttgatggaatgtaatgtt 33245399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 37722964 - 37722921
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgtt 37722921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 3563278 - 3563320
Alignment:
Q  263 gagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgtt 3563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 9764335 - 9764381
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatgtt 9764381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 305
Target Start/End: Complemental strand, 20523291 - 20523249
Alignment:
Q  263 gagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgtt 20523249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 22305109 - 22305147
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  22305109 ctaagagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 300
Target Start/End: Original strand, 34982212 - 34982254
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgta 300  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||    
T  34982212 cctaagagtgtgtttggataggggaatgttttgagggaatgta 34982254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 19533971 - 19533934
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  19533971 tgtttggatggaggaatgttttgagggaatgtaatgtt 19533934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 23092123 - 23092078
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||||||    
T  23092123 taagagtgtgtttggatgggggaatgttttgaacgaatgtaatgtt 23092078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 28828500 - 28828463
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  28828500 tgtttggatggggaaatattttgaggtaatgtaatgtt 28828463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 32250169 - 32250125
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||||||    
T  32250169 taagagtgtgtttggatggggaa-tgttttgagggaaagtaatgtt 32250125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 20523133 - 20523173
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaat 20523173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 49457333 - 49457386
Alignment:
Q  252 aaaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  49457333 aaaattcctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 49457386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 42006029 - 42005982
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42006029 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 42005982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 305
Target Start/End: Original strand, 44436254 - 44436301
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  44436254 cctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 44436301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 305
Target Start/End: Complemental strand, 35279980 - 35279931
Alignment:
Q  256 atcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||||||||    
T  35279980 atcctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgtt 35279931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 305
Target Start/End: Complemental strand, 44692999 - 44692938
Alignment:
Q  244 tattttagaaaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| | ||| ||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  44692999 tattttaaagaaaccctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 44692938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 27252057 - 27252010
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| |||||||||||||  |||||||||||||||||||||||    
T  27252057 cctaagagtgtgtttggatggggggatgttttgagggaatgtaatgtt 27252010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 46672875 - 46672832
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 46672832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 47767432 - 47767475
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 47767475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 34088568 - 34088614
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgtt 34088614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 9129505 - 9129460
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 9129460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 9137612 - 9137567
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 9137567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 2732639 - 2732682
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  2732639 agagtgtgtttggatggggaaatgttttgaggtaatataatgtt 2732682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 297
Target Start/End: Original strand, 25655315 - 25655350
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaat 297  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25655315 agagtgtgtttggatggggaaatgttttgagggaat 25655350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 36398061 - 36398018
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgtt 36398018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 37054394 - 37054437
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgtt 37054437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 44692822 - 44692865
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgtt 44692865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 25655441 - 25655403
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  25655441 ctaagagtgtgtttggatggggaaatgttttgacggaat 25655403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 53129918 - 53129872
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| |||||||||| || ||||||| ||||||||||||||||    
T  53129918 ctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgtt 53129872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 7302344 - 7302389
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||||| || ||||||||||| ||||||||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatgtt 7302389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 21307598 - 21307561
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  21307598 tgtttggatgggggaatgttttgcgggaatgtaatgtt 21307561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 5415782 - 5415826
Alignment:
Q  261 aagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| ||||||||| ||| ||| ||||||||||||||||||||    
T  5415782 aagagtgtgtttggataggggaatattttgagggaatgtaatgtt 5415826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 8574829 - 8574781
Alignment:
Q  257 tcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  8574829 tcctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatgtt 8574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 305
Target Start/End: Complemental strand, 6919870 - 6919823
Alignment:
Q  258 cctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  6919870 cctaagagtgtgtttggatgggggaatgttttgagggaaagtaatgtt 6919823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 8574695 - 8574738
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgtt 8574738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 9285647 - 9285690
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 9285690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 776242 - 776196
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatgtt 776196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 8475176 - 8475214
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  8475176 ctaagagtgtgtttggatggggaaatgttttgagggaat 8475214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 28918162 - 28918208
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 28918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 9763018 - 9763055
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| |||||||||||||||||||||||||||||    
T  9763018 tgtttggaaggggaaatgttttgagggaatgtaatgtt 9763055  T

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Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

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Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 34245062 - 34245010
Alignment:
Q  253 aaaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||| ||||| ||||||||||| | ||||||||||||||||||||||||    
T  34245062 aaaacccttagagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 34245010  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Original strand, 776080 - 776123
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgtt 776123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 1195343 - 1195384
Alignment:
Q  254 aaatcctaagagtctgtttggatggggaaatgttttgaggga 295  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  1195343 aaatactaagagtgtgtttggatgggggaatgttttgaggga 1195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 15299577 - 15299541
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  15299577 tgtttggatggggaa-tgttttgagggaatgtaatgtt 15299541  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 10480116 - 10480162
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 10480162  T

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Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 7228087 - 7228042
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  7228087 taagagtgtgtttggatggggaaatgttttgagagaatgtaatgtt 7228042  T

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Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 14365698 - 14365743
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 14365743  T

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Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 261 - 305
Target Start/End: Original strand, 14537198 - 14537242
Alignment:
Q  261 aagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||    
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 14537242  T

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Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 33189338 - 33189287
Alignment:
Q  254 aaatcctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  33189338 aaattctaagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 33189287  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 41461674 - 41461631
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||    
T  41461674 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtt 41461631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 784790 - 784836
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatgtt 784836  T

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Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 11684596 - 11684642
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgtt 11684642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 769034 - 769079
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 769079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 11141303 - 11141348
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||||||||||| ||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgtattgtt 11141348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 17180295 - 17180340
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||    
T  17180295 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgtt 17180340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 27033488 - 27033533
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatgtt 27033533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 28740602 - 28740639
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28740602 tgtttgaatggggaaatgttttgagggaatgtaatgtt 28740639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Original strand, 13017779 - 13017819
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaat 302  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  13017779 agagtgtgtttggatgtggaaatgttttgagggaatgtaat 13017819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 1583882 - 1583839
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||    
T  1583882 agagtgtgtttggatgggggaatgttttgagggaatgtattgtt 1583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 11716550 - 11716515
Alignment:
Q  270 tttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgtt 11716515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 305
Target Start/End: Complemental strand, 14365858 - 14365815
Alignment:
Q  262 agagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||| ||||||||||| | ||||||||||||||||||||||||    
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgtt 14365815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 270 - 305
Target Start/End: Original strand, 30698289 - 30698324
Alignment:
Q  270 tttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgtt 30698324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 41461512 - 41461558
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    |||| ||| ||||||||||||||||| |||||||| |||||||||||    
T  41461512 ctaatagtgtgtttggatggggaaatattttgaggtaatgtaatgtt 41461558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 41585748 - 41585710
Alignment:
Q  259 ctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  41585748 ctaagagtgtgtttggatggtgaaatgttttgagggaat 41585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Complemental strand, 3345881 - 3345852
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||||||||||||||||||||||||    
T  3345881 tgtttggatggggaaatgttttgagggaat 3345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 11793901 - 11793938
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  11793901 tgtttggatgggggaatattttgagggaatgtaatgtt 11793938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 39630223 - 39630268
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| |||||| |||| ||||||||||||||||||||| ||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgtattgtt 39630268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 297
Target Start/End: Complemental strand, 44205707 - 44205678
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaat 297  Q
    ||||||||||||||||||||||||||||||    
T  44205707 tgtttggatggggaaatgttttgagggaat 44205678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 558 - 521
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  558 tgtttggatgggggaatgttttgagggaatgtaatgtt 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 2035 - 2072
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2035 tgtttggatgggggaatgttttgagggaatgtaatgtt 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 42139 - 42094
Alignment:
Q  260 taagagtctgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaatgtaatgtt 42094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 305
Target Start/End: Original strand, 82949 - 82986
Alignment:
Q  268 tgtttggatggggaaatgttttgagggaatgtaatgtt 305  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  82949 tgtttggatgggtgaatgttttgagggaatgtaatgtt 82986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 297
Target Start/End: Original strand, 109040 - 109084
Alignment:
Q  253 aaaatcctaagagtctgtttggatggggaaatgttttgagggaat 297  Q
    |||||| | ||||| ||||||||||||| ||||||||||||||||    
T  109040 aaaatctttagagtgtgtttggatgggggaatgttttgagggaat 109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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