View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1247_low_5 (Length: 530)
Name: NF1247_low_5
Description: NF1247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1247_low_5 |
 | |
|
| [»] scaffold0400 (2 HSPs) |
| | |
|
| [»] scaffold0365 (2 HSPs) |
| | |
|
Alignment Details
Target: scaffold0400 (Bit Score: 435; Significance: 0; HSPs: 2)
Name: scaffold0400
Description:
Target: scaffold0400; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 12997 - 12506
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12997 |
cagagacattaccacacaagcctttgttatttctcagtgcttcaattggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
12898 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
12897 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattatgtgaaagattcaatgtttgtatgtgattt |
12798 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12797 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaagatcttcaataacttctaattggccaaactcaatgggaatgtttc |
12698 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
12697 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggatgaagccacttaaattatttttttcaagctccaa |
12598 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
12597 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatcgagagtttgattaacaaagataagt |
12506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0400; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 19 - 491
Target Start/End: Complemental strand, 6701 - 6229
Alignment:
| Q |
19 |
ttaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgtatgatatat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||||||||| ||||| ||||| || ||||||||||||||||||| |
|
|
| T |
6701 |
ttaccacacaagcctttgttatttcttaatgcttcaattggagcatttttgaaggctggaatgtttggaattggaccttcaaattggttgtatgatatat |
6602 |
T |
|
| Q |
119 |
caacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgatttaactgtcc |
218 |
Q |
| |
|
||| | |||| |||||| |||||| ||| ||| |||| |||||||| ||||||| |||||| ||||| ||||||||||||| || | ||||||||| ||| |
|
|
| T |
6601 |
caatagttgttaagcttgacatctcaccataggtcaagggaatggtaccagaaaaattattatgtgagagattcaatgtttctaagcgatttaactctcc |
6502 |
T |
|
| Q |
219 |
aagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttccttcaaac |
318 |
Q |
| |
|
|||||||| |||||||||||| ||||||| ||| | ||||| |||| || |||||||| || ||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
6501 |
aagcattgttggtatggttccattcaaaacattctcgctaagatcaagattttcaataattttcaattgtccaaactcagcaggaatgtctccttcaaac |
6402 |
T |
|
| Q |
319 |
ctattttggctcaaattcaaatgtattaactcagacaaccttccaag-tcttctatggatgaagccacttaaattannnnnnncaagctccaaggcagtt |
417 |
Q |
| |
|
||||||||||||||||||| | | ||| | || || |||||||| | |||| ||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
6401 |
ttattttggctcaaattcaagtccaataaattaggtaatcttccaagttgttct-gggatgaagccactgaaattatttgttgcaagctccaagatagtt |
6303 |
T |
|
| Q |
418 |
agtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaa |
491 |
Q |
| |
|
| | |||| | ||||||||||| |||||| |||||||| ||||| |||| |||||||| |||| | |||||| |
|
|
| T |
6302 |
attttatgcaataatgcaatttgttcaggaacttctcctacaagatgattgctacttatcaagagctggatcaa |
6229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365 (Bit Score: 435; Significance: 0; HSPs: 2)
Name: scaffold0365
Description:
Target: scaffold0365; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 13640 - 13149
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13640 |
cagagacattaccacacaagcctttgttatttctcagtgcttcaattggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
13541 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13540 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattatgtgaaagattcaatgtttgtatgtgattt |
13441 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13440 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaagatcttcaataacttctaattggccaaactcaatgggaatgtttc |
13341 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
13340 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggatgaagccacttaaattatttttttcaagctccaa |
13241 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
13240 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatcgagagtttgattaacaaagataagt |
13149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0365; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 19 - 491
Target Start/End: Complemental strand, 7345 - 6873
Alignment:
| Q |
19 |
ttaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgtatgatatat |
118 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||||||||| ||||| ||||| || ||||||||||||||||||| |
|
|
| T |
7345 |
ttaccacacaagcctttgttatttcttaatgcttcaattggagcatttttgaaggctggaatgtttggaattggaccttcaaattggttgtatgatatat |
7246 |
T |
|
| Q |
119 |
caacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgatttaactgtcc |
218 |
Q |
| |
|
||| | |||| |||||| |||||| ||| ||| |||| |||||||| ||||||| |||||| ||||| ||||||||||||| || | ||||||||| ||| |
|
|
| T |
7245 |
caatagttgttaagcttgacatctcaccataggtcaagggaatggtaccagaaaaattattatgtgagagattcaatgtttctaagcgatttaactctcc |
7146 |
T |
|
| Q |
219 |
aagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttccttcaaac |
318 |
Q |
| |
|
|||||||| |||||||||||| ||||||| ||| | ||||| |||| || |||||||| || ||||| ||||||||| ||||||| |||||||||| |
|
|
| T |
7145 |
aagcattgttggtatggttccattcaaaacattctcgctaagatcaagattttcaataattttcaattgtccaaactcagcaggaatgtctccttcaaac |
7046 |
T |
|
| Q |
319 |
ctattttggctcaaattcaaatgtattaactcagacaaccttccaag-tcttctatggatgaagccacttaaattannnnnnncaagctccaaggcagtt |
417 |
Q |
| |
|
||||||||||||||||||| | | ||| | || || |||||||| | |||| ||||||||||||| |||||| ||||||||||| |||| |
|
|
| T |
7045 |
ttattttggctcaaattcaagtccaataaattaggtaatcttccaagttgttct-gggatgaagccactgaaattatttgttgcaagctccaagatagtt |
6947 |
T |
|
| Q |
418 |
agtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaa |
491 |
Q |
| |
|
| | |||| | ||||||||||| |||||| |||||||| ||||| |||| |||||||| |||| | |||||| |
|
|
| T |
6946 |
attttatgcaataatgcaatttgttcaggaacttctcctacaagatgattgctacttatcaagagctggatcaa |
6873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 355; Significance: 0; HSPs: 12)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 11 - 502
Target Start/End: Original strand, 14532639 - 14533130
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||| |||| | ||||| |||||||||||||||||||| |
|
|
| T |
14532639 |
cagagacattaccacacaagcctttgttatttctaagtgcttcaattggagctttttggaaggctgtaatgcttggaattggaccctccaattggttgta |
14532738 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
14532739 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattatgtgaaagattcaatgtttgtaagtgattt |
14532838 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| || |||| ||||||| |||| |||||||||||| | ||||||| ||||||||| |||||||||| |
|
|
| T |
14532839 |
aactgtccaagcattgatggtatggttccactcataacattttcactaagatcaagatcttcaataacctttaattggtcaaactcaacaggaatgtttc |
14532938 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
14532939 |
cttcgaacttattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggatgaagccacttaaattatttttttcaagctccaa |
14533038 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
14533039 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaacttctcccaaaagattattgttatttatcgagagtttgattaacaaagataagt |
14533130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 17 - 502
Target Start/End: Complemental strand, 14504194 - 14503709
Alignment:
| Q |
17 |
cattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgtatgatat |
116 |
Q |
| |
|
|||||||||||||| ||||||| ||||||| ||||||| ||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
14504194 |
cattaccacacaagtctttgttgtttctcagtgcttcaattggagcttgttggaaggctggaatgcttggaatcggaccctccaattggttgtatgatat |
14504095 |
T |
|
| Q |
117 |
atcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgatttaactgt |
216 |
Q |
| |
|
||||| |||||||||||||||||| | ||| |||| || || || || ||||| |||||||| ||||| ||||||||||||| || ||||||||| | |
|
|
| T |
14504094 |
atcaataattgtcaagcttaacatatcaccagagctaaaggggatcgtaccagacagattattatgtgagagattcaatgtttctaaatgatttaacact |
14503995 |
T |
|
| Q |
217 |
ccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttccttcaa |
316 |
Q |
| |
|
|||| |||||| ||||| ||||| |||| |||||||||||| || |||| |||||||||||| | |||| |||||||||||| ||||||||||||||||| |
|
|
| T |
14503994 |
ccaaacattgaaggtatcgttccattcataaaatttccactgagatcaagatcttcaataacatttaatcggccaaactcaacgggaatgtttccttcaa |
14503895 |
T |
|
| Q |
317 |
acctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaaggcagt |
416 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
14503894 |
acttattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctagggatgaagccacttaaattatttgttgcaagctccaaggtagt |
14503795 |
T |
|
| Q |
417 |
tagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14503794 |
tagtgcttgcaatgatgcaatttgtataggaacctctccagaaagatgattgttacttatcgagagtttgatcaacaaagacaagt |
14503709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 15032676 - 15032185
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||| ||| |||| |||||| ||||| ||||||||||| |||||||| |
|
|
| T |
15032676 |
cagagacattaccacataagcctttgttatttgtcaatgcttcaattggagcttttttgaaagctgtaatgtttggaattggaccctccaactggttgta |
15032577 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | | |||| | |||||||| ||||| ||||| || ||||| ||||||||||||| || | ||||| |
|
|
| T |
15032576 |
agatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagcgattt |
15032477 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| |||||| |||||||| |||| || ||||||||| | |||||| |||||||| |||||||| | |
|
|
| T |
15032476 |
aactgcccaagcattgatggtatggttccattcataaaattcccactaagatcaagattttcaataacattcaattgggcaaactcagcaggaatgttcc |
15032377 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
| |||||| |||||||||||||||| || || | |||| ||| ||||| ||||||||| || ||||||||||||| |||||| |||||||||| |
|
|
| T |
15032376 |
cctcaaacttattttggctcaaatttaactgcaataacctagataacctaccaagtcttttagggatgaagccactcaaattatttgttgcaagctccaa |
15032277 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||||| | |||| |||||||||||||||||||| |||||| |||| | ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15032276 |
tgcagttagctcgtgcaatgatgcaatttgtacaggaacttctccagaaaggtgattgttacttaacgagagtttgatcaacaaagataagt |
15032185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 15011218 - 15010727
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||| ||||||| |||||||| || ||| |||| || || |||||||||||||||||||||||||| |
|
|
| T |
15011218 |
cagagacattaccacataagcctttgttatttgtcaatgcttcaattggagctcttttgaaagctgtaacatttggaatcggaccctccaattggttgta |
15011119 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | | |||| | |||||||| ||||| ||||| || ||||| ||||||||||||| || ||||||| |
|
|
| T |
15011118 |
agatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagtgattt |
15011019 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||| | |||| |||||||| |||| || ||||||||| | |||||||||||||||| |||||||| | |
|
|
| T |
15011018 |
aactggccaagcattgctggtatggttccattcatagaattcccactaagatcaagattttcaataacattcaattggccaaactcaacaggaatgttcc |
15010919 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
| |||||| |||||||||||||||| || || | |||| ||||||| | |||||| || || ||||||||||||| |||||| |||||||||| |
|
|
| T |
15010918 |
cctcaaacttattttggctcaaatttaactgcaataacatagacaacataccaagttttttagggatgaagccactcaaattatttattgcaagctccaa |
15010819 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| |||||| |||||| ||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
15010818 |
tgcagttagttgatgcaatgatgcaatttgtacaggaacttctccagaaagatgattgttacttaaggagagtttgaacaacaaagataagt |
15010727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 15002325 - 15001834
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| ||||||| |||||||| || ||| |||| |||||| ||| ||||||||||||| |||||||| |
|
|
| T |
15002325 |
cagaaacattaccacacaagcctttgttatttctcagtgcttcaattggagctctttcgaaagctgtaatgtttggagtcggaccctccaactggttgta |
15002226 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | | |||| | |||||||| ||||| ||||| || ||||| ||||||||||||| || ||||||| |
|
|
| T |
15002225 |
agatatatcaacagttgtcaagcttaacatatcaacaaagctttagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagtgattt |
15002126 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||| | |||| |||||||| |||| | ||||||||| | |||||||||||||||| |||||||| | |
|
|
| T |
15002125 |
aactggccaagcattgctggtatggttccattcatagaattcccactaagatcaaggttttcaataacattcaattggccaaactcaacaggaatgttcc |
15002026 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
| |||||| |||||||||||||||| || || | |||| ||||||| | |||||| || | ||||||| ||||| |||||| |||||||||| |
|
|
| T |
15002025 |
cctcaaacttattttggctcaaatttaactgcaataacatagacaacataccaagtttttcagggatgaatccactcaaattatttgttgcaagctccaa |
15001926 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
||||||||| |||| ||||||||||||||| |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15001925 |
tgcagttagttgatgcaatgatgcaatttgtactggaacttctccataaagatgattgttacttaacgagagtttgatcaacaaagataagt |
15001834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 500
Target Start/End: Complemental strand, 15037238 - 15036749
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||| ||||||| |||||||| || ||| |||| |||||| ||||||||||||||||| |||||||| |
|
|
| T |
15037238 |
cagagacattaccacataagcctttgttatttgtcaatgcttcaattggagctcttttgaaagctgtaatgtttggaatcggaccctccaactggttgta |
15037139 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | | |||| || |||||||| ||||| ||||| || ||||| ||||||||||||| || ||||||| |
|
|
| T |
15037138 |
agatatatcaacagttgtcaagcttaacatatcaacaaagcttaagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagtgattt |
15037039 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||| | |||| |||||||| |||| | ||||||||| | |||||||||||||||| |||||||| | |
|
|
| T |
15037038 |
aactggccaagcattgctggtatggttccattcatagaattcccactaagatcaaggttttcaataacattcaattggccaaactcaacaggaatgttcc |
15036939 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
| |||| | |||| |||||||||||||| || | |||| ||||||| | |||||| || |||||||||||||||| ||| |||||||||| |
|
|
| T |
15036938 |
cctcaagcttattatggctcaaattcaactgcaataacctagacaacataccaagtttttccaggatgaagccacttaagttatttgttgcaagctccaa |
15036839 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataa |
500 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
15036838 |
tgcagttagttgatgcaatgatgcaatttgtacaggaacttctccagaaagatgattgttacttaacgagagtttgaacaacaaagataa |
15036749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 17 - 501
Target Start/End: Complemental strand, 14468015 - 14467531
Alignment:
| Q |
17 |
cattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgtatgatat |
116 |
Q |
| |
|
|||||||||||||| ||||||| ||||||| ||||||| ||||||| | | |||||||||||||| | ||||||||||||||||| |||||||| ||||| |
|
|
| T |
14468015 |
cattaccacacaagtctttgttgtttctcagtgcttcaattggagcctgttggaaggctggaatgcttggaatcggaccctccaactggttgtacgatat |
14467916 |
T |
|
| Q |
117 |
atcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgatttaactgt |
216 |
Q |
| |
|
||| ||| |||||||||||||||| | | | |||| || ||||||| |||||||||||||| ||||| ||||||||||||| || ||||||||||||| |
|
|
| T |
14467915 |
atctacagttgtcaagcttaacatatcaactgagctgaagagaatggtaccagaaagattattatgtgagagattcaatgtttctaagtgatttaactgt |
14467816 |
T |
|
| Q |
217 |
ccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttccttcaa |
316 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||| ||||||| |||| |||||||| ||| | ||||||||||||||| | |||||||||||||||| |
|
|
| T |
14467815 |
ccaaacattgctggaatggttccgttcaaaaaattctcactaagatcaagatcttcaagaacatttaattggccaaactcgacaggaatgtttccttcaa |
14467716 |
T |
|
| Q |
317 |
acctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaaggcagt |
416 |
Q |
| |
|
|| |||||| ||| |||||||| |||| |||| ||||| ||||||||| | | |||| | |||||||||||| ||||||||||| | |
|
|
| T |
14467715 |
acatatttttgcttaaattcaagtgtaataacattgacaaacttccaagttgttttgggattgaaccacttaaattatttgttgaaagctccaaggtatc |
14467616 |
T |
|
| Q |
417 |
tagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataag |
501 |
Q |
| |
|
|||| |||| |||||||| |||| |||||| ||||||| |||||| ||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
14467615 |
tagtttttgcaatgatgcaacttgtgcaggaacttctcctgaaagatgattgttacttaccgagagttggatcaacaaagataag |
14467531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 11 - 502
Target Start/End: Complemental strand, 15017333 - 15016842
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||| ||| ||||||| |||||||| || ||| |||| |||||| ||| ||||||||||||| |||||||| |
|
|
| T |
15017333 |
cagagatattaccacacaagcccttgttatttgtcaatgcttcaattggagctcttccgaaagctgtaatgtttggagtcggaccctccaactggttgta |
15017234 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||| ||||||| |||||||||||||||| | | | |||| | |||||||| ||||| ||||| || ||||| ||||||||||||| || ||||||| |
|
|
| T |
15017233 |
agatacatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagtgattt |
15017134 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
||||| |||||||||| |||||||||||| |||| | |||| |||||||| |||| || ||||||||| | |||||||||||||||| |||||||| | |
|
|
| T |
15017133 |
aactggccaagcattgctggtatggttccattcatagaattcccactaagatcaagattttcaataacattcaattggccaaactcaacaggaatgttcc |
15017034 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
| |||||| |||||||||||||||| || | | |||| ||||||| | |||||| || | ||||||||||||| |||||| |||||||||| |
|
|
| T |
15017033 |
cctcaaacttattttggctcaaatttaacttcaataacctagacaacataccaagtttttcagggatgaagccactgaaattatttgctgcaagctccaa |
15016934 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
||||||| | | |||| |||| |||||||| |||||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15016933 |
tgcagttaattcgtgcaatgattcaatttgttcaggaacttctccagaaagatgattgttacttaacgagagtttgatcaacaaagataagt |
15016842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 12 - 366
Target Start/End: Complemental strand, 14482202 - 14481848
Alignment:
| Q |
12 |
agagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgtat |
111 |
Q |
| |
|
|||| |||||||||||||| ||||||| ||||||| ||||||| |||||| ||| |||||||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
14482202 |
agaggcattaccacacaagtctttgttgtttctcagtgcttcaattggagttttctggaaggctggaatgcttggaatcggaccctccaactggttgtac |
14482103 |
T |
|
| Q |
112 |
gatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattta |
211 |
Q |
| |
|
|||||||| ||| || ||||||||||||||| ||| || || || |||||||| |||||||||||||| ||||| ||||||||||||| || |||||||| |
|
|
| T |
14482102 |
gatatatctacagttatcaagcttaacatctaaccatatctgaagggaatggtaccagaaagattattatgtgagagattcaatgtttctaagtgattta |
14482003 |
T |
|
| Q |
212 |
actgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttcc |
311 |
Q |
| |
|
||||||||| ||||| ||| |||||||||||||||||||| ||||||| |||| |||||||| ||| | ||||||||||||||| | ||||||||||| |
|
|
| T |
14482002 |
actgtccaaacattgctggaatggttccgttcaaaaaattctcactaagatcaagatcttcaagaacatttaattggccaaactcgacaggaatgtttcc |
14481903 |
T |
|
| Q |
312 |
ttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagt |
366 |
Q |
| |
|
||||||| |||||| ||| |||||||| |||| |||| ||||| ||||||||| |
|
|
| T |
14481902 |
ttcaaacatatttttgcttaaattcaagtgtaataacattgacaaacttccaagt |
14481848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 11 - 490
Target Start/End: Original strand, 14522518 - 14522997
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| | ||||||| ||||||| || |||| |||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
14522518 |
cagagacattaccgcacaagcctttgttatttctaaatgcttcaactggagctctttggaatgctgtaatgtttggaattggaccctccaaccggttgta |
14522617 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
|||||||||||| ||||||| |||||||| | | |||| || |||||| | ||| | |||||||| ||||| ||||||||||||| || | ||||| |
|
|
| T |
14522618 |
agatatatcaacagttgtcaaacttaacatatcaaaaaagcttaagggaatgttaccatagagattattatgtgagagattcaatgtttctaagcgattt |
14522717 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||| || ||||| |||| |||||||||||| | ||||| |||| |||| |||||||||| |
|
|
| T |
14522718 |
aactgtccaagcattgttggtatggttccattcaaaaaattcccgctaagatcaagatcttcaataacattcaattgaccaagttcaacaggaatgtttc |
14522817 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
|||||||| ||||||||||||||||||| || | |||| |||||||||||||||| || | |||| || |||||||||||| |||| ||||| |
|
|
| T |
14522818 |
cttcaaacttattttggctcaaattcaactgcaataacctagacaaccttccaagtttttcagggataaaaccacttaaattatttgttgcaagatccaa |
14522917 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatca |
490 |
Q |
| |
|
| ||||||| | |||| ||||||||| || | ||||| |||||| |||||| ||| |||||||||||||||| ||||| |
|
|
| T |
14522918 |
tgtagttagttcatgcaatgatgcaatctgcataggaacttctcccgaaagatgattattacttatcgagagttggatca |
14522997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 112 - 502
Target Start/End: Complemental strand, 15025234 - 15024844
Alignment:
| Q |
112 |
gatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattta |
211 |
Q |
| |
|
|||||||||||| |||||||||||||||| | | | |||| | |||||||| ||||| ||||| || ||||| ||||||||||||| || | |||||| |
|
|
| T |
15025234 |
gatatatcaacagttgtcaagcttaacatatcaacaaagcttgagggaatggtaccagagagattgttatgtgagagattcaatgtttctaagcgattta |
15025135 |
T |
|
| Q |
212 |
actgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttcc |
311 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||| |||||| |||||||| |||| || ||||||||| | |||||| |||||||| |||||||| || |
|
|
| T |
15025134 |
actgcccaagcattgatggtatggttccattcataaaattcccactaagatcaagattttcaataacattcaattgggcaaactcagcaggaatgttccc |
15025035 |
T |
|
| Q |
312 |
ttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaag |
411 |
Q |
| |
|
|||||| |||||||||||||||| || || | |||| ||| ||||| ||||||||| || ||||||||||||| |||||| |||||||||| |
|
|
| T |
15025034 |
ctcaaacttattttggctcaaatttaactgcaataacctagataacctaccaagtcttttagggatgaagccactcaaattatttgttgcaagctccaat |
15024935 |
T |
|
| Q |
412 |
gcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtttgatcaacaaagataagt |
502 |
Q |
| |
|
|||||||| | |||| |||||||||||||||||||| |||||| |||| | ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
15024934 |
gcagttagctcgtgcaatgatgcaatttgtacaggaacttctccagaaaggtgattgttacttaacgagagtttgatcaacaaagataagt |
15024844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 11 - 484
Target Start/End: Complemental strand, 15040962 - 15040504
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||||| || ||| || ||||| ||||||| |||||||||| | |
|
|
| T |
15040962 |
cagagacattaccacacaagcctttgttatttcttaatgcttcaaatggggcttgtaggaaggatgaaatttttggaattggacccttcaattggttgca |
15040863 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||| ||||||||| | |||||| ||| ||| |||| |||||||| | ||| ||||||||||||||| || | ||||| |
|
|
| T |
15040862 |
tgatatatcaacagttgtcaagcctgacatctcaccataggtcaagggaatggtac---aaa------------aaagattcaatgtttctaagcgattt |
15040778 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccactaaggtcaatatcttcaataacttctaattggccaaactcaatgggaatgtttc |
310 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||| |||| |||||||| |||| || ||||||||||| ||| || |||| |||| |||||||||| |
|
|
| T |
15040777 |
aactgtccaagcattgttggtatggttccattcaaagaattcccactaagatcaagattttcaataacttttaactgtccaatctcatcaggaatgtttc |
15040678 |
T |
|
| Q |
311 |
cttcaaacctattttggctcaaattcaaatgtattaactcagacaaccttccaagtcttctatggatgaagccacttaaattannnnnnncaagctccaa |
410 |
Q |
| |
|
|||||||| |||||||||||| ||| || |||| |||| ||| || ||||||||| | | ||| |||||||||||||||| | |||||||| |
|
|
| T |
15040677 |
cttcaaacttattttggctcatatttaagtgtaataacatagataatcttccaagttgttttgggacgaagccacttaaattatttgttgccagctccaa |
15040578 |
T |
|
| Q |
411 |
ggcagttagtgcctgcagtgatgcaatttgtacaggaatttctcctaaaagattattgttacttatcgagagtt |
484 |
Q |
| |
|
| || | | ||| || ||| |||||||||||||||| ||| ||| ||| | |||| ||||||||||||||| |
|
|
| T |
15040577 |
gatagcaacttccttcaatgaggcaatttgtacaggaacttcccctgaaaagtaattgctacttatcgagagtt |
15040504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 14606116 - 14605870
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| || ||| ||| |||| || || | ||||||||||||||||| || |
|
|
| T |
14606116 |
cagagacattaccacacaagcctttattatttctcaccacttcaattgtagcgttgctgaaagctcgaatattggggagtggaccctccaattggttata |
14606017 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||| | || |||| | ||||| |||||||||||||| ||||| | ||||||||||| | || || |
|
|
| T |
14606016 |
tgatatatcaacagatgttaagctgaacatctgatcgaagctagagggaataaaaccagaaagattattatgtgagatattcaatgtttccaagtatttc |
14605917 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccact |
257 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
14605916 |
aactgtgtaagcattgatggtattgttccatccaaaaaatttccact |
14605870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 16025293 - 16025047
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||| ||| ||| || ||| ||| |||| || || | ||||||||||||||||| || |
|
|
| T |
16025293 |
cagagacattaccacacaagcctttattatttctcaccacttcaattgtagcgttgctgaaagctcgaatattggggagtggaccctccaattggttata |
16025194 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||| || ||||| ||||||| | || |||| | ||||| |||||||||||||| ||||| | ||||||||||| | || || |
|
|
| T |
16025193 |
tgatatatcaacagacgttaagctgaacatctgatcgaagctagagggaataaaaccagaaagattattatgtgagatattcaatgtttccaagtatttc |
16025094 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttccgttcaaaaaatttccact |
257 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | ||||||||||||||| |
|
|
| T |
16025093 |
aactgtgtaagcattgatggtattgttccatccaaaaaatttccact |
16025047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 16103098 - 16102851
Alignment:
| Q |
11 |
cagagacattaccacacaagcctttgttatttctcactgcttcagttggagcttttaggaaggctggaatgttaggaatcggaccctccaattggttgta |
110 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||| |||| ||| ||| ||| ||| ||| ||||||| || | ||||||||||||||||| || |
|
|
| T |
16103098 |
cagagacattaccacacaagtctttattatttctcaacacttcgattgtagcgtttctgaaagctcgaatgttggggagtggaccctccaattggttata |
16102999 |
T |
|
| Q |
111 |
tgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagattcaatgtttgtatgtgattt |
210 |
Q |
| |
|
||||||||||||| ||||||||||||||| | | | |||| | ||||| |||||||||||||| ||||| | ||||||||||| | || || |
|
|
| T |
16102998 |
tgatatatcaacagatgtcaagcttaacatttgatcaaagctagagggaataaagccagaaagattattatgtgagatattcaatgtttccaagtatttc |
16102899 |
T |
|
| Q |
211 |
aactgtccaagcattgatggtatggttcc-gttcaaaaaatttccact |
257 |
Q |
| |
|
|||||| ||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
16102898 |
aactgtgtaagcattgatggtattgttccatttaaaaaaatttccact |
16102851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 91 - 257
Target Start/End: Complemental strand, 16172695 - 16172529
Alignment:
| Q |
91 |
ggaccctccaattggttgtatgatatatcaacaattgtcaagcttaacatcttaccgtagctcaaaggaatggttccagaaagattattgtgtgaaagat |
190 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| || || || ||||||| | || |||| | ||||| ||||||||||||||| ||||| | || |
|
|
| T |
16172695 |
ggaccttccaattggttatatgatatatcaacagacgttaaactgaacatctgatcgaagctagagggaataaatccagaaagattattatgtgagatat |
16172596 |
T |
|
| Q |
191 |
tcaatgtttgtatgtgatttaactgtccaagcattgatggtatggttccgttcaaaaaatttccact |
257 |
Q |
| |
|
||||||||| | || || |||||| ||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
16172595 |
tcaatgtttccaagtatttcaactgtgtaagcattgatggtattgttccatttaaaaaatttccact |
16172529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 37026919 - 37026857
Alignment:
| Q |
74 |
ctggaatgttaggaatcggaccctccaattggttgtatgatatatcaacaattgtcaagctta |
136 |
Q |
| |
|
||||| |||||||||| | |||||| |||||||| || ||||| ||||| ||||||||||||| |
|
|
| T |
37026919 |
ctggattgttaggaattgaaccctctaattggttataagatatgtcaaccattgtcaagctta |
37026857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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