View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1247_low_6 (Length: 516)

Name: NF1247_low_6
Description: NF1247
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1247_low_6
NF1247_low_6
[»] chr8 (52 HSPs)
chr8 (30-371)||(13116327-13116668)
chr8 (128-371)||(42099982-42100225)
chr8 (38-342)||(45279706-45280008)
chr8 (233-372)||(17339530-17339669)
chr8 (128-370)||(32797136-32797381)
chr8 (253-372)||(13117634-13117753)
chr8 (47-342)||(41629734-41630029)
chr8 (258-373)||(17338036-17338151)
chr8 (232-371)||(42098560-42098698)
chr8 (128-343)||(32693855-32694070)
chr8 (159-342)||(6397809-6397992)
chr8 (231-371)||(28418803-28418944)
chr8 (256-369)||(211594-211707)
chr8 (256-369)||(240549-240662)
chr8 (256-369)||(725217-725330)
chr8 (256-369)||(793904-794017)
chr8 (231-373)||(28420152-28420295)
chr8 (186-342)||(42870839-42870998)
chr8 (165-342)||(30787513-30787690)
chr8 (160-371)||(42872098-42872308)
chr8 (133-356)||(42877631-42877853)
chr8 (257-354)||(26696546-26696643)
chr8 (159-342)||(32798437-32798622)
chr8 (232-332)||(4810505-4810605)
chr8 (240-332)||(6398485-6398577)
chr8 (159-291)||(30786753-30786887)
chr8 (232-355)||(32695255-32695378)
chr8 (232-374)||(44076343-44076485)
chr8 (256-354)||(8570132-8570230)
chr8 (232-342)||(45281170-45281278)
chr8 (258-342)||(212718-212802)
chr8 (258-342)||(239452-239536)
chr8 (258-342)||(726341-726425)
chr8 (258-342)||(792807-792891)
chr8 (258-342)||(798842-798926)
chr8 (257-373)||(23708754-23708870)
chr8 (60-126)||(44038784-44038850)
chr8 (227-372)||(45437456-45437602)
chr8 (257-370)||(23702955-23703068)
chr8 (227-332)||(26697807-26697912)
chr8 (272-342)||(13197961-13198031)
chr8 (233-342)||(22551033-22551142)
chr8 (231-342)||(8571594-8571707)
chr8 (259-348)||(416560-416649)
chr8 (259-348)||(37400818-37400907)
chr8 (258-371)||(38697012-38697125)
chr8 (304-372)||(41743667-41743735)
chr8 (316-372)||(42878880-42878936)
chr8 (257-328)||(29103527-29103598)
chr8 (304-363)||(45394972-45395031)
chr8 (259-325)||(1659293-1659359)
chr8 (168-356)||(38696320-38696509)
[»] chr1 (40 HSPs)
chr1 (29-370)||(15233819-15234159)
chr1 (38-373)||(16963829-16964170)
chr1 (126-371)||(49802770-49803014)
chr1 (186-371)||(15232749-15232936)
chr1 (240-371)||(49801614-49801744)
chr1 (232-353)||(16965107-16965228)
chr1 (173-343)||(15072710-15072881)
chr1 (168-342)||(27814318-27814493)
chr1 (159-282)||(46110368-46110491)
chr1 (241-377)||(24499644-24499780)
chr1 (159-342)||(50444605-50444788)
chr1 (243-354)||(46111479-46111590)
chr1 (201-372)||(14470852-14471024)
chr1 (233-370)||(52628854-52628991)
chr1 (256-342)||(16123313-16123399)
chr1 (232-342)||(45584989-45585099)
chr1 (168-342)||(14477706-14477881)
chr1 (259-355)||(51042350-51042445)
chr1 (159-326)||(44999368-44999535)
chr1 (258-373)||(41872571-41872686)
chr1 (257-355)||(15071355-15071453)
chr1 (257-343)||(44278354-44278440)
chr1 (60-126)||(48030001-48030067)
chr1 (155-371)||(15746669-15746885)
chr1 (256-373)||(23091346-23091463)
chr1 (186-342)||(35943380-35943537)
chr1 (73-127)||(13970781-13970835)
chr1 (264-352)||(34351968-34352056)
chr1 (256-372)||(46467142-46467258)
chr1 (304-372)||(52627511-52627579)
chr1 (304-372)||(42245939-42246007)
chr1 (73-120)||(51676130-51676177)
chr1 (58-116)||(17241862-17241920)
chr1 (304-370)||(42244629-42244695)
chr1 (186-332)||(48096965-48097111)
chr1 (304-373)||(33369247-33369316)
chr1 (316-372)||(20064172-20064228)
chr1 (38-126)||(24303157-24303245)
chr1 (257-333)||(30535674-30535750)
chr1 (240-332)||(44276158-44276250)
[»] chr6 (36 HSPs)
chr6 (29-370)||(29380189-29380533)
chr6 (63-371)||(17838950-17839258)
chr6 (44-372)||(23397158-23397474)
chr6 (119-371)||(5186565-5186806)
chr6 (233-381)||(6702852-6702999)
chr6 (232-371)||(23392211-23392350)
chr6 (258-370)||(6701378-6701490)
chr6 (257-371)||(2687929-2688043)
chr6 (230-371)||(5187601-5187741)
chr6 (203-371)||(32506976-32507145)
chr6 (256-356)||(2687242-2687342)
chr6 (241-372)||(29722659-29722790)
chr6 (240-373)||(18346739-18346871)
chr6 (232-370)||(17837614-17837751)
chr6 (232-371)||(29381711-29381849)
chr6 (231-370)||(232174-232312)
chr6 (284-371)||(12256616-12256703)
chr6 (257-372)||(6452516-6452631)
chr6 (257-342)||(6452310-6452395)
chr6 (175-332)||(12669759-12669917)
chr6 (370-496)||(5261283-5261412)
chr6 (421-496)||(5285335-5285411)
chr6 (231-342)||(7310302-7310413)
chr6 (305-362)||(12256557-12256614)
chr6 (421-496)||(5445813-5445889)
chr6 (259-373)||(15730036-15730151)
chr6 (231-372)||(233547-233684)
chr6 (258-351)||(27080941-27081034)
chr6 (261-342)||(34024073-34024154)
chr6 (370-407)||(5285280-5285317)
chr6 (272-372)||(34023882-34023982)
chr6 (304-371)||(7308499-7308566)
chr6 (232-354)||(7311706-7311826)
chr6 (263-348)||(13847914-13847999)
chr6 (77-122)||(26545648-26545693)
chr6 (304-332)||(27082196-27082224)
[»] chr5 (32 HSPs)
chr5 (36-370)||(30911946-30912280)
chr5 (232-371)||(30910738-30910877)
chr5 (128-343)||(39605344-39605560)
chr5 (159-373)||(325092-325306)
chr5 (203-371)||(33173910-33174079)
chr5 (159-371)||(22308705-22308918)
chr5 (232-373)||(22047727-22047868)
chr5 (256-370)||(22307506-22307620)
chr5 (155-356)||(8521267-8521467)
chr5 (155-371)||(1010268-1010483)
chr5 (128-343)||(30857825-30858031)
chr5 (168-342)||(30859085-30859262)
chr5 (232-342)||(39603879-39603989)
chr5 (231-342)||(22049115-22049226)
chr5 (232-342)||(27705297-27705406)
chr5 (48-135)||(39605243-39605330)
chr5 (73-125)||(7492825-7492877)
chr5 (304-372)||(8523798-8523866)
chr5 (304-370)||(9169584-9169650)
chr5 (127-297)||(11263574-11263741)
chr5 (259-348)||(28393251-28393340)
chr5 (257-298)||(33172623-33172664)
chr5 (159-255)||(1102732-1102828)
chr5 (240-296)||(15548310-15548365)
chr5 (325-373)||(15941409-15941457)
chr5 (304-356)||(20538065-20538117)
chr5 (304-371)||(34899003-34899070)
chr5 (304-371)||(34894146-34894213)
chr5 (259-325)||(27262480-27262546)
chr5 (259-348)||(41874018-41874106)
chr5 (73-109)||(5577542-5577578)
chr5 (309-369)||(41798004-41798064)
[»] chr3 (66 HSPs)
chr3 (128-367)||(27837921-27838159)
chr3 (128-370)||(35372035-35372279)
chr3 (128-370)||(53612869-53613102)
chr3 (128-371)||(41263635-41263878)
chr3 (134-371)||(26887437-26887674)
chr3 (123-371)||(38240903-38241150)
chr3 (159-371)||(10730882-10731094)
chr3 (127-371)||(40244184-40244427)
chr3 (173-370)||(10732048-10732247)
chr3 (257-372)||(53614278-53614393)
chr3 (128-343)||(34818111-34818326)
chr3 (128-342)||(40745342-40745556)
chr3 (262-371)||(35370910-35371019)
chr3 (241-370)||(41264642-41264771)
chr3 (247-372)||(26886268-26886392)
chr3 (231-371)||(50809418-50809559)
chr3 (231-371)||(50810812-50810953)
chr3 (231-371)||(50864911-50865052)
chr3 (231-371)||(50866303-50866444)
chr3 (258-342)||(18458663-18458747)
chr3 (128-267)||(3209842-3209982)
chr3 (234-342)||(18197173-18197281)
chr3 (257-370)||(3817268-3817381)
chr3 (260-352)||(37736089-37736181)
chr3 (128-197)||(42592710-42592779)
chr3 (47-135)||(40745231-40745319)
chr3 (285-370)||(3811525-3811610)
chr3 (258-371)||(42686151-42686264)
chr3 (233-374)||(53187553-53187693)
chr3 (231-342)||(53194848-53194960)
chr3 (258-374)||(36176512-36176629)
chr3 (159-342)||(42684902-42685086)
chr3 (261-352)||(12107992-12108083)
chr3 (57-135)||(41263892-41263970)
chr3 (257-355)||(41544675-41544773)
chr3 (57-135)||(42592793-42592871)
chr3 (256-342)||(53420342-53420428)
chr3 (231-373)||(53624340-53624482)
chr3 (257-342)||(40364345-40364430)
chr3 (238-342)||(38242502-38242606)
chr3 (31-135)||(53613116-53613220)
chr3 (256-343)||(53421765-53421852)
chr3 (73-135)||(34818340-34818402)
chr3 (73-127)||(39606422-39606476)
chr3 (73-127)||(54673432-54673486)
chr3 (259-342)||(18442278-18442358)
chr3 (259-342)||(19487352-19487432)
chr3 (169-325)||(27841625-27841783)
chr3 (258-371)||(37735303-37735416)
chr3 (259-348)||(44182302-44182391)
chr3 (232-332)||(3208520-3208620)
chr3 (231-299)||(36175332-36175400)
chr3 (47-126)||(11150497-11150576)
chr3 (232-330)||(53622700-53622798)
chr3 (259-348)||(3807980-3808069)
chr3 (47-116)||(10731100-10731169)
chr3 (259-348)||(37981662-37981751)
chr3 (259-348)||(44175604-44175693)
chr3 (304-354)||(3209983-3210033)
chr3 (173-342)||(34819204-34819374)
chr3 (73-127)||(48538075-48538129)
chr3 (258-351)||(23443463-23443556)
chr3 (169-253)||(10338854-10338938)
chr3 (82-126)||(34800090-34800134)
chr3 (304-356)||(43174758-43174810)
chr3 (279-343)||(55328332-55328396)
[»] chr2 (44 HSPs)
chr2 (47-370)||(29220680-29220994)
chr2 (47-370)||(29333979-29334293)
chr2 (47-369)||(18615515-18615828)
chr2 (128-371)||(1082985-1083228)
chr2 (38-297)||(6028787-6029045)
chr2 (168-371)||(29219382-29219588)
chr2 (168-371)||(29332681-29332887)
chr2 (232-371)||(18616986-18617125)
chr2 (123-342)||(32470446-32470665)
chr2 (256-371)||(6030602-6030717)
chr2 (128-343)||(17460570-17460775)
chr2 (371-509)||(22585460-22585600)
chr2 (258-369)||(34468957-34469068)
chr2 (259-370)||(44192453-44192564)
chr2 (126-370)||(6032187-6032432)
chr2 (241-370)||(1085377-1085504)
chr2 (123-355)||(11315946-11316169)
chr2 (168-373)||(43033077-43033282)
chr2 (232-370)||(17459251-17459389)
chr2 (256-370)||(44191134-44191248)
chr2 (240-371)||(12359666-12359798)
chr2 (29-126)||(31915804-31915901)
chr2 (241-342)||(28562798-28562899)
chr2 (257-370)||(249022-249135)
chr2 (173-342)||(11317287-11317458)
chr2 (232-355)||(11547672-11547795)
chr2 (186-370)||(35903506-35903690)
chr2 (240-356)||(34512826-34512942)
chr2 (57-131)||(1083243-1083317)
chr2 (257-342)||(7437766-7437851)
chr2 (259-354)||(28561382-28561477)
chr2 (264-352)||(36010593-36010681)
chr2 (258-342)||(43034477-43034561)
chr2 (240-342)||(6030458-6030560)
chr2 (257-342)||(32469174-32469260)
chr2 (73-127)||(18751244-18751298)
chr2 (231-355)||(21664816-21664940)
chr2 (287-372)||(35061351-35061435)
chr2 (259-348)||(40322971-40323060)
chr2 (316-376)||(102420-102480)
chr2 (259-327)||(2384477-2384545)
chr2 (304-356)||(37956961-37957013)
chr2 (258-331)||(36011648-36011721)
chr2 (259-327)||(8265572-8265640)
[»] chr4 (65 HSPs)
chr4 (56-371)||(7708592-7708909)
chr4 (128-370)||(23203829-23204071)
chr4 (128-372)||(52241032-52241275)
chr4 (240-371)||(10168770-10168902)
chr4 (128-343)||(40792776-40792989)
chr4 (233-370)||(54866612-54866748)
chr4 (168-367)||(7707589-7707791)
chr4 (241-374)||(23201840-23201973)
chr4 (256-371)||(10167422-10167537)
chr4 (154-373)||(4714014-4714235)
chr4 (240-371)||(50546903-50547035)
chr4 (73-342)||(52963595-52963860)
chr4 (201-370)||(13165494-13165663)
chr4 (259-371)||(33231386-33231498)
chr4 (181-342)||(393566-393728)
chr4 (165-342)||(1829779-1829957)
chr4 (258-364)||(54865109-54865214)
chr4 (257-367)||(50548228-50548334)
chr4 (258-340)||(33232703-33232785)
chr4 (159-332)||(1587218-1587392)
chr4 (231-373)||(42871090-42871232)
chr4 (232-372)||(2312462-2312602)
chr4 (128-222)||(2311100-2311193)
chr4 (239-343)||(2310948-2311052)
chr4 (256-366)||(53204363-53204473)
chr4 (257-342)||(53205488-53205573)
chr4 (159-371)||(6348152-6348364)
chr4 (243-342)||(1188869-1188968)
chr4 (232-371)||(1588069-1588208)
chr4 (257-352)||(42810208-42810303)
chr4 (244-342)||(4129019-4129117)
chr4 (168-371)||(11968508-11968713)
chr4 (231-355)||(390230-390354)
chr4 (243-342)||(44503670-44503768)
chr4 (154-356)||(53435654-53435857)
chr4 (217-342)||(4871328-4871454)
chr4 (232-342)||(6349533-6349643)
chr4 (258-342)||(37882860-37882944)
chr4 (231-370)||(53432060-53432200)
chr4 (259-371)||(24426336-24426448)
chr4 (257-373)||(31968397-31968513)
chr4 (31-135)||(40793003-40793107)
chr4 (173-375)||(15449994-15450198)
chr4 (233-332)||(37884258-37884357)
chr4 (261-332)||(42872308-42872379)
chr4 (57-135)||(23203737-23203815)
chr4 (231-372)||(54485523-54485665)
chr4 (258-355)||(44501531-44501628)
chr4 (256-372)||(1831267-1831383)
chr4 (217-296)||(13166733-13166813)
chr4 (231-342)||(27847704-27847815)
chr4 (256-355)||(1190196-1190295)
chr4 (240-343)||(31965860-31965963)
chr4 (258-327)||(49344015-49344085)
chr4 (73-127)||(5169527-5169581)
chr4 (231-352)||(11438546-11438668)
chr4 (231-332)||(54484349-54484451)
chr4 (216-355)||(14524814-14524954)
chr4 (259-342)||(49342645-49342728)
chr4 (304-342)||(27850984-27851022)
chr4 (231-372)||(13533239-13533380)
chr4 (259-348)||(23317290-23317379)
chr4 (168-342)||(52239903-52240079)
chr4 (55-126)||(47862551-47862622)
chr4 (318-370)||(13531143-13531195)
[»] chr7 (60 HSPs)
chr7 (128-368)||(11501180-11501420)
chr7 (44-377)||(22337174-22337495)
chr7 (128-370)||(22538724-22538966)
chr7 (128-371)||(13562819-13563053)
chr7 (123-342)||(43459481-43459700)
chr7 (233-372)||(13564221-13564359)
chr7 (232-370)||(22335977-22336115)
chr7 (128-370)||(40812486-40812731)
chr7 (35-342)||(32256165-32256485)
chr7 (168-342)||(47454363-47454537)
chr7 (128-355)||(41079711-41079937)
chr7 (159-370)||(3413530-3413742)
chr7 (257-370)||(3414839-3414952)
chr7 (231-367)||(24844262-24844398)
chr7 (240-372)||(11502410-11502542)
chr7 (240-371)||(22537556-22537686)
chr7 (168-370)||(32254987-32255192)
chr7 (257-370)||(40738843-40738957)
chr7 (257-354)||(45454052-45454149)
chr7 (231-342)||(24282954-24283065)
chr7 (169-371)||(6173369-6173569)
chr7 (240-354)||(47059122-47059236)
chr7 (159-333)||(43460728-43460904)
chr7 (243-372)||(47456366-47456495)
chr7 (258-342)||(4300054-4300138)
chr7 (31-135)||(13563067-13563171)
chr7 (201-342)||(40509682-40509824)
chr7 (201-342)||(22115112-22115254)
chr7 (231-352)||(30310137-30310259)
chr7 (240-354)||(45455360-45455474)
chr7 (258-371)||(32602930-32603043)
chr7 (257-342)||(40508404-40508489)
chr7 (186-343)||(47060409-47060566)
chr7 (256-373)||(24281069-24281187)
chr7 (257-371)||(33096866-33096980)
chr7 (304-359)||(24844402-24844457)
chr7 (258-371)||(4298710-4298823)
chr7 (273-371)||(33779105-33779203)
chr7 (240-371)||(41078753-41078884)
chr7 (258-355)||(30333298-30333395)
chr7 (279-351)||(534093-534165)
chr7 (279-351)||(537331-537403)
chr7 (168-251)||(2414863-2414946)
chr7 (231-333)||(22690402-22690505)
chr7 (304-371)||(38539668-38539735)
chr7 (304-342)||(11344533-11344571)
chr7 (29-108)||(11501433-11501508)
chr7 (73-115)||(19626911-19626953)
chr7 (159-225)||(22691113-22691179)
chr7 (304-370)||(30334689-30334755)
chr7 (259-348)||(5095104-5095193)
chr7 (231-372)||(9662215-9662356)
chr7 (257-342)||(30311474-30311559)
chr7 (304-356)||(25533200-25533252)
chr7 (58-116)||(5737412-5737470)
chr7 (132-250)||(44554647-44554764)
chr7 (159-251)||(669295-669386)
chr7 (318-370)||(9660119-9660171)
chr7 (311-371)||(22039126-22039186)
chr7 (73-121)||(23526552-23526600)
[»] scaffold0034 (1 HSPs)
scaffold0034 (128-354)||(109621-109847)
[»] scaffold0077 (2 HSPs)
scaffold0077 (31-343)||(52617-52950)
scaffold0077 (232-371)||(54165-54304)
[»] scaffold0019 (2 HSPs)
scaffold0019 (201-367)||(63079-63246)
scaffold0019 (258-371)||(61848-61961)
[»] scaffold0472 (1 HSPs)
scaffold0472 (233-372)||(726-863)
[»] scaffold1152 (1 HSPs)
scaffold1152 (133-372)||(2365-2595)
[»] scaffold0031 (2 HSPs)
scaffold0031 (201-342)||(123995-124136)
scaffold0031 (232-342)||(125213-125323)
[»] scaffold0118 (1 HSPs)
scaffold0118 (168-355)||(43488-43678)
[»] scaffold0078 (1 HSPs)
scaffold0078 (256-375)||(18805-18924)
[»] scaffold0011 (2 HSPs)
scaffold0011 (168-371)||(127430-127634)
scaffold0011 (318-371)||(128657-128710)
[»] scaffold2071 (1 HSPs)
scaffold2071 (159-370)||(587-799)
[»] scaffold0035 (1 HSPs)
scaffold0035 (259-348)||(83210-83299)
[»] scaffold0013 (1 HSPs)
scaffold0013 (181-356)||(32584-32758)
[»] scaffold1251 (1 HSPs)
scaffold1251 (231-371)||(1063-1204)
[»] scaffold0262 (1 HSPs)
scaffold0262 (38-126)||(4122-4209)


Alignment Details
Target: chr8 (Bit Score: 326; Significance: 0; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 30 - 371
Target Start/End: Complemental strand, 13116668 - 13116327
Alignment:
Q  30 gaagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatg 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13116668 gaagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttagcattattttatg 13116569  T
Q  130 aagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattata 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13116568 aagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattata 13116469  T
Q  230 aacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13116468 gacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatga 13116369  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13116368 aaacatgaaattaaataagggaccaaacgatctaataagcct 13116327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 128 - 371
Target Start/End: Original strand, 42099982 - 42100225
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| | ||| |||||| |  |    
T  42099982 tgaaaatctaacggttccttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccacca 42100081  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
     | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||| |||||||||||||| |||||||||    
T  42100082 aagacatttgaagttaaagttaacagtcgggaattatttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaat 42100181  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  42100182 gaaaacatgaaattaaataagggatcaaacgatctaataagcct 42100225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 38 - 342
Target Start/End: Complemental strand, 45280008 - 45279706
Alignment:
Q  38 tcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatcta 137  Q
    |||||||  ||||| |||||||||||| ||  || |||||||||  |  ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  45280008 tcgctggagaagaataggagaaaagaagttgtgatttttaatttgac--tagggatattttaggtatttcacatctttagtattattttatgaagatcta 45279911  T
Q  138 acggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttg 237  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||| || || |||||||||| ||||||| | |||| ||||| |  ||| ||||||     
T  45279910 acgatcccttttatcataaatagatcgaatggttaaaattaacaaaattattaaggtctacgatagaccacttttaagactggtccaccatatacattta 45279811  T
Q  238 gagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatga 337  Q
    |||||||||||||| ||||||||||||||| |||||| |  ||||  |||||||| ||||||    |||||||||||||  ||| ||||||||||  |||    
T  45279810 gagttaaagttaaccgtcgggatttatttgccaaacgaaaaaaaacttgagggaccaaaacgtacgttttattaattgtatgactaaaatgaaaatttga 45279711  T
Q  338 aatta 342  Q
    |||||    
T  45279710 aatta 45279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 17339530 - 17339669
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  17339530 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaa 17339629  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcctt 372  Q
     |||||||||||||||||||||||||||||||||||||||    
T  17339630 tatgaaattaaataagggaccaaacgatctaataagcctt 17339669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 128 - 370
Target Start/End: Complemental strand, 32797381 - 32797136
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| | | ||| ||| || || |    
T  32797381 tgaagatctaacggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatgaaccatttttaaggttgatccatca 32797282  T
Q  228 taaacatttggagttaaagttaacagtcgggat---ttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaa 324  Q
    || ||||||||||||||| ||||| | || |||   |||||||| |||||||||||||  ||||||||| |||||    |||||||||||||||||||||    
T  32797281 tagacatttggagttaaacttaacggccgcgatttattatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaa 32797182  T
Q  325 aatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||| ||||||||  |||||||||||  |||| ||||||||    
T  32797181 aatgaaaacttgaaattatttaagggaccaatagatcaaataagcc 32797136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 253 - 372
Target Start/End: Original strand, 13117634 - 13117753
Alignment:
Q  253 gtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13117634 gtcgggatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggac 13117733  T
Q  353 caaacgatctaataagcctt 372  Q
    ||||||||||||||||||||    
T  13117734 caaacgatctaataagcctt 13117753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 47 - 342
Target Start/End: Complemental strand, 41630029 - 41629734
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtccct 146  Q
    |||||||||||| || |||||   | |||||||||  |||||||| ||||||| |||||||||| | |||  |||||||||||||||||||| |||| ||    
T  41630029 aagaagaggagagaaaaaattgaaatttttaatttgacattaggggtattttaagtatttcacaacgttagtattattttatgaagatctaatggtctct 41629930  T
Q  147 tttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaag 246  Q
    ||||||||||||| || ||||||||||||||||||||| ||||| ||| ||||||| |||||| | ||| |||||  |  ||| || ||||||||| |||    
T  41629929 tttatgataaataaattgaatggttaaaattaacaaaattaataaggtatacgatgaaccacttttaaggttggttcaccatagacttttggagttcaag 41629830  T
Q  247 ttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||| |||||||||||||||||||||||| |||||  |||||||  ||||      |||||||||||||| ||||||||| ||||| ||||||||    
T  41629829 ttaacggtcgggatttatttggcaaacggaagaaaacttgagggatcaaaatatacgttttattaattgtgagaccaaaataaaaacttgaaatta 41629734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 17338151 - 17338036
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17338151 gatttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 17338052  T
Q  358 gatctaataagccttt 373  Q
    ||| ||||||||||||    
T  17338051 gatttaataagccttt 17338036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 232 - 371
Target Start/End: Complemental strand, 42098698 - 42098560
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||||||||| |||||||||||||||||||  ||| ||| ||||  ||||||||||||||||||||||||||||||||||||||    
T  42098698 catttggggttaaaattaacagtcgg-atttatttggcaaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaa 42098600  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42098599 acatgaaattaaataagggaccaaacgatctaataagcct 42098560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 32694070 - 32693855
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| |||| ||||||||||||||||||| || |||||||||||| |||| ||||| |||||| ||| | ||||| | ||| |||||| || |    
T  32694070 tgaagatctaatggtctcttttatgataaatagatcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatca 32693971  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||  ||||||||||||| || |||||||||||||||||||||||||||| ||| |||| ||| ||    ||||||||||||||||||||||||    
T  32693970 tatacatttaaagttaaagttaactgttgggatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaat 32693871  T
Q  328 gaaaacatgaaattaa 343  Q
    |||||| | |||||||    
T  32693870 gaaaacttaaaattaa 32693855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 159 - 342
Target Start/End: Complemental strand, 6397992 - 6397809
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggg 258  Q
    ||||| ||||||| ||||||| |||| ||||| |||||| | ||||||||| ||||| ||||| ||  |||   ||||||||||||| |||||| ||  |    
T  6397992 agatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccactgtaaaggttggtttaccatagttatttggagttaaatttaacattcatg 6397893  T
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||||||| ||||  ||||||||||||| |  | ||||||||||||||||||||||||||||| |||||||||    
T  6397892 atttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttttattaattgtgggaccaaaatgaaaatatgaaatta 6397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 371
Target Start/End: Complemental strand, 28418944 - 28418803
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  | ||||||||||||||||||||||||| ||||||||||||||||    ||||||||||| ||||||||||||||    
T  28418944 acatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatga 28418845  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||  ||||||||  |||||||||||  |||||| |||||||    
T  28418844 aaaattgaaattatttaagggaccaatggatctattaagcct 28418803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 369
Target Start/End: Complemental strand, 211707 - 211594
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||| |||    
T  211707 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 211608  T
Q  356 acgatctaataagc 369  Q
    | ||||||||||||    
T  211607 atgatctaataagc 211594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 240549 - 240662
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||| |||    
T  240549 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 240648  T
Q  356 acgatctaataagc 369  Q
    | ||||||||||||    
T  240649 atgatctaataagc 240662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 369
Target Start/End: Complemental strand, 725330 - 725217
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||| |||    
T  725330 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 725231  T
Q  356 acgatctaataagc 369  Q
    | ||||||||||||    
T  725230 atgatctaataagc 725217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 369
Target Start/End: Original strand, 793904 - 794017
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||| |||||||| ||||  | ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||| |||    
T  793904 gggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaa 794003  T
Q  356 acgatctaataagc 369  Q
    | ||||||||||||    
T  794004 atgatctaataagc 794017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 231 - 373
Target Start/End: Original strand, 28420152 - 28420295
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  | |||||||||| ||||||||||||||  |||||||||||||||    ||||||||||| ||||||||||||||    
T  28420152 acatttagagttaaagttaacagtttgagatttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatga 28420251  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    |||  ||||||||  |||||||||||  |||||| |||||||||    
T  28420252 aaaattgaaattatttaagggaccaatggatctattaagccttt 28420295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 342
Target Start/End: Complemental strand, 42870998 - 42870839
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaaca---tttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaa 282  Q
    ||||| |||||||| ||||||||||| |||||||||| |  ||| |||   ||||| |||||| ||||||||| ||||| ||| ||||||| || |||||    
T  42870998 taataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggattcattcggcaaacagacgaaaa 42870899  T
Q  283 tgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
     || |||||||||||||    |||||||||||||||||||||||||||||| ||||||||    
T  42870898 agtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 42870839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 165 - 342
Target Start/End: Original strand, 30787513 - 30787690
Alignment:
Q  165 aatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttat 264  Q
    ||||||||| |||||||||| |   ||| ||||||||| |||| | | ||  |||||| | ||||||||||| |||||||||||||||  | ||||||||    
T  30787513 aatggttaagattaacaaaattctaaggttctacgatgaaccatttttaaagttggtccactataaacatttagagttaaagttaacatacaggatttat 30787612  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||| ||||| ||||||||| ||||      ||||||||||| |||||||||||||||||| | ||||||    
T  30787613 ttggcaaacggaagaaaaagtgagggaccaaaatatatattttattaattatgggaccaaaatgaaaacttaaaatta 30787690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 160 - 371
Target Start/End: Original strand, 42872098 - 42872308
Alignment:
Q  160 gatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggga 259  Q
    |||||||||| | | ||||| |||| ||||||| |||| | | ||||||||| ||| ||||||||  ||| |||||||  |||||||||||| ||| |||    
T  42872098 gatcgaatgggttatattaa-aaaattaataggatctatggtagaccactcttaaggttggtctaccatagacatttgaggttaaagttaaccgtcagga 42872196  T
Q  260 tttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacga 359  Q
    |||||||| |||||||||||||| |||| |||||||||||    ||||||| ||| || ||  ||||||||||| | ||||||  ||||||||||   ||    
T  42872197 tttatttgacaaacggaggaaaaagtgaaggactaaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggaccattgga 42872296  T
Q  360 tctaataagcct 371  Q
    || |||||||||    
T  42872297 tcaaataagcct 42872308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 133 - 356
Target Start/End: Complemental strand, 42877853 - 42877631
Alignment:
Q  133 atctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaac 232  Q
    ||||||| |||| ||||  || ||||||||| || |||| ||||||| | || ||||||| |||| | ||||||| ||| ||| |||||| |  ||| ||    
T  42877853 atctaaccgtccttttttggaaaaatagatcaaagggttgaaattaa-ataattaataggatctatggtggaccattcttaaggttggtccaccatacac 42877755  T
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||||||||| ||||||||||||||| |  ||| ||  ||| ||||||||| |||||   | |||||||| || || ||||||||||||||    
T  42877754 atttggggttaaagttaaccgtcgggatttatttgactgacgaagacaaacgtgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaa 42877655  T
Q  333 catgaaattaaataagggaccaaa 356  Q
    | ||||||||| |||| |||||||    
T  42877654 cttgaaattaattaagagaccaaa 42877631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 26696643 - 26696546
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    |||||||||||||||| ||||||||| ||||||||| |||| |    |||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  26696643 ggatttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaacttgaaattaattaggggacca 26696546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 159 - 342
Target Start/End: Original strand, 32798437 - 32798622
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcg 256  Q
    ||||| || |||| ||||||| | || ||||||| |||| | ||||||||||| ||| ||| || |  ||| ||||  || |||||||| ||||| ||      
T  32798437 agatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccgtga 32798536  T
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||| ||||||||| ||||  ||||||||||||| |    |||||||||||||||||||||||||||||| ||||||||    
T  32798537 ggatttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 32798622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 4810605 - 4810505
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| ||||| ||| |||| |||||     ||||||||||| |||||||||||| |||    
T  4810605 catttggggttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaa 4810506  T
Q  332 a 332  Q
    |    
T  4810505 a 4810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 240 - 332
Target Start/End: Original strand, 6398485 - 6398577
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||   ||||||||||| || ||||||||||||||    
T  6398485 gttaaacttaacagtcatgatttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaa 6398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 291
Target Start/End: Complemental strand, 30786887 - 30786753
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagtt--aaagttaacagtcg 256  Q
    ||||| || ||||||||||||||||| ||||| ||| || ||||||||||| | ||  ||| || |  ||| |||||| |||||  ||||||||||||||    
T  30786887 agatcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacatttagagttaaaaagttaacagtcg 30786788  T
Q  257 ggatttatttggcaaacggaggaaaatgtgaggga 291  Q
    | ||||||||||||||||||| |||| ||||||||    
T  30786787 gaatttatttggcaaacggagaaaaaagtgaggga 30786753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 355
Target Start/End: Original strand, 32695255 - 32695378
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| ||| ||| | ||||||||||| |||||||| |||| ||||| |||||    |||||||||||||| |||||||||||||    
T  32695255 catttggggttaaacttaacggtcaggactaatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaa 32695354  T
Q  332 acatgaaattaaataagggaccaa 355  Q
    || ||||||||  | |||||||||    
T  32695355 acttgaaattatttgagggaccaa 32695378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 232 - 374
Target Start/End: Original strand, 44076343 - 44076485
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaa 330  Q
    ||||||| |||||| ||||| || |||||||||||||||||||||||||||  ||||| || |||| |  || |||||||||||||||||||||||| ||    
T  44076343 catttggggttaaacttaactgtagggatttatttggcaaacggaggaaaaattgaggcaccaaaa-gatacgttttattaattgtgggaccaaaataaa 44076441  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataagcctttt 374  Q
    ||  ||||||||  | ||||||||   |||| ||||||||||||    
T  44076442 aatttgaaattatttgagggaccattggatcaaataagcctttt 44076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 354
Target Start/End: Complemental strand, 8570230 - 8570132
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    |||||||||||||||||| |||  ||| ||||||||| ||||||    ||||||||||||| |||||||||||||||| ||||||||| || |||||||    
T  8570230 gggatttatttggcaaacagagacaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaacgtgaaattaattaggggacca 8570132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 45281170 - 45281278
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    |||||||| ||||||||||| || ||||||||||||||||| |||||||||| ||| |||  |||||   | ||||||||||||| ||||||||||||||    
T  45281170 catttgga-ttaaagttaactgttgggatttatttggcaaatggaggaaaatctgaaggatcaaaac-atatttttattaattgttggaccaaaatgaaa 45281267  T
Q  332 acatgaaatta 342  Q
    || ||||||||    
T  45281268 acttgaaatta 45281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 212718 - 212802
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||  ||||||||    
T  212718 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 239536 - 239452
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||  ||||||||    
T  239536 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 239452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 726341 - 726425
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||  ||||||||    
T  726341 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 726425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 792891 - 792807
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||  ||||||||    
T  792891 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 792807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 798842 - 798926
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||| ||||||| ||||||||||||||| ||  |||| ||||||||||||| ||||||||||  ||||||||    
T  798842 gatttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 798926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 373
Target Start/End: Original strand, 23708754 - 23708870
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||| ||||||||||||   || || |||||||||||  ||||||||||||||| | ||||||||||||||||| |  ||||||  || ||||||||     
T  23708754 ggatttttttggcaaacggctcaatatttgagggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaattagttaggggaccaat 23708853  T
Q  357 cgatctaataagccttt 373  Q
     ||||||||||||||||    
T  23708854 ggatctaataagccttt 23708870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 44038784 - 44038850
Alignment:
Q  60 aagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||    
T  44038784 aagaaattgggatttttaatttagcattaggggtattttaggtatttcacatatttagtattatttt 44038850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 372
Target Start/End: Original strand, 45437456 - 45437602
Alignment:
Q  227 ataaacatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
    ||||| |||||| |||||| ||||||||| |||||||||||| | | |||||| |||   ||||||| |||||   | ||||||||||| ||||| ||||    
T  45437456 ataaatatttggggttaaacttaacagtcagggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaa 45437555  T
Q  326 atgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||| ||||||||| || |||| |||| || ||| ||||||||    
T  45437556 atgaaaacttgaaattaattaggggatcaaatgacctattaagcctt 45437602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 23703068 - 23702955
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||| ||||||||||||   || || |||||||||||  ||||||||||||||| | ||||||||||||||||| |  ||||||  || ||||||||     
T  23703068 ggatttttttggcaaacggctcaatatttgagggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaattagttaggggaccaat 23702969  T
Q  357 cgatctaataagcc 370  Q
     |||||||||||||    
T  23702968 ggatctaataagcc 23702955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 332
Target Start/End: Original strand, 26697807 - 26697912
Alignment:
Q  227 ataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaa 326  Q
    |||||||||||| |||||| |||||| |  ||||||||| | |||| ||| ||||| ||||||||||||||||    ||||||||||| |||||| ||||    
T  26697807 ataaacatttggggttaaacttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaattatgggactaaaa 26697906  T
Q  327 tgaaaa 332  Q
    ||||||    
T  26697907 tgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 342
Target Start/End: Original strand, 13197961 - 13198031
Alignment:
Q  272 acggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||| |||||||||| |||||   |||||||||||||||||||||||| ||||||  |||||||    
T  13197961 acggaggaaaaagtgagggacttaaacgtaccttttattaattgtgggaccaaaacgaaaactcgaaatta 13198031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 342
Target Start/End: Complemental strand, 22551142 - 22551033
Alignment:
Q  233 atttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaa 330  Q
    |||||| |||||| |||||| ||  |||||||||||||||| |||| |||| ||||||||| |||| |  || |||||||||||||||||||||||| ||    
T  22551142 atttggggttaaacttaacaatccaggatttatttggcaaatggagaaaaa-gtgagggaccaaaa-gatacgttttattaattgtgggaccaaaataaa 22551045  T
Q  331 aacatgaaatta 342  Q
    ||| ||||||||    
T  22551044 aacttgaaatta 22551033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 8571594 - 8571707
Alignment:
Q  231 acatttggagttaaagttaacagtc--gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatg 328  Q
    |||||||| |||||| ||||||| |  ||||||||||||| |||||||| ||||  ||| |||| ||||||    |||||||||||||  ||||||||||    
T  8571594 acatttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaaaatg 8571693  T
Q  329 aaaacatgaaatta 342  Q
    ||||  ||||||||    
T  8571694 aaaatgtgaaatta 8571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 416560 - 416649
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  416560 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 416649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 37400907 - 37400818
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  37400907 atttatttggcaaactgtgggaaacgtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 37400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 38697012 - 38697125
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||| |  ||||||| |||||||| |||  |||||   | |||||||| || ||||||||||||||||||  |||||||| | ||||||||||     
T  38697012 gatttatttgaccgacggaggcaaatgtgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattgagggaccaaat 38697111  T
Q  358 gatctaataagcct 371  Q
    || ||| |||||||    
T  38697112 gagctattaagcct 38697125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 372
Target Start/End: Original strand, 41743667 - 41743735
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||| || |||||||||||||||||| | ||||||| ||| |||||||| || ||| ||||||||    
T  41743667 ttttattacttatgggaccaaaatgaaaacttaaaattaattaaaggaccaaatgacctattaagcctt 41743735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 42878880 - 42878936
Alignment:
Q  316 tgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||||||||||||| ||||||||| || ||||||||| || ||| ||||||||    
T  42878880 tgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcctt 42878936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 29103598 - 29103527
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatg 328  Q
    |||||||||| |||| ||||||||||  ||||||||| ||| |    |||||||||||||||||||||||||    
T  29103598 ggatttatttagcaatcggaggaaaaaatgagggactcaaatgtacgttttattaattgtgggaccaaaatg 29103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 363
Target Start/End: Complemental strand, 45395031 - 45394972
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatcta 363  Q
    ||||||||||| ||||| |||||||||||| | ||||||| ||||||| |||| ||||||    
T  45395031 ttttattaattatgggatcaaaatgaaaacttaaaattaattaagggatcaaatgatcta 45394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Original strand, 1659293 - 1659359
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
    |||||||| |||||| | |||||| |||| |||||||||||  | |||||||||||||| |||||||    
T  1659293 atttatttagcaaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaa 1659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 356
Target Start/End: Complemental strand, 38696509 - 38696320
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc-gggatttattt 266  Q
    |||||||||||  |||| ||||  | |||| | ||||||||| | ||| ||||||||  ||| |||||| | |||||| |||| ||   |||||||||||    
T  38696509 ggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacatttagggttaaacttaatagcaagggatttattt 38696410  T
Q  267 ggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    | |  ||||||| |||  |||||||| |||||   | |||||||| || || ||||||||||||||| | ||||||| || |||||||||    
T  38696409 gaccgacggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaattaattaggggaccaaa 38696320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 294; Significance: 1e-165; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 29 - 370
Target Start/End: Original strand, 15233819 - 15234159
Alignment:
Q  29 agaagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttat 128  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||    
T  15233819 agaagatgctcgctgggaaagaagaggagaaaagaaattaggatttttaatttagtattaggggtattttaggtatttcacatctttagcattattttat 15233918  T
Q  129 gaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattat 228  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15233919 gaagatataatggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctgaagattggtctattat 15234018  T
Q  229 aaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatg 328  Q
    | ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15234019 agacatttgaagttaaag-taacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatg 15234117  T
Q  329 aaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  15234118 aaaacatgaaattaaataagggaccaaacgatctaataagcc 15234159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 38 - 373
Target Start/End: Complemental strand, 16964170 - 16963829
Alignment:
Q  38 tcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagat--- 134  Q
    |||||||  |||||||||| |||| ||||| | | |||| ||||  ||||||||||||||||||||||||| ||||||| |  ||||||||||||||       
T  16964170 tcgctggagaagaagaggataaaataaattggaattttttatttttcattagggatattttaggtatttcatatctttagctatattttatgaagatgaa 16964071  T
Q  135 ---ctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaa 231  Q
       |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||||||||| | ||| |||||| || |||||    
T  16964070 gatctaatggtcccttttatgataaatagatcgaagggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaa 16963971  T
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  16963970 catttagagttaaagttaacagtcagcatttatttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaa 16963871  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    |||||||||||| |||  ||||||||||||||||||||||||    
T  16963870 acatgaaattaattaaaagaccaaacgatctaataagccttt 16963829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 126 - 371
Target Start/End: Original strand, 49802770 - 49803014
Alignment:
Q  126 tatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctat 225  Q
    |||||| ||||||| ||||||||||| |||| |||||||||| ||| |||| ||||||| ||||  |||||||||| ||||||| | ||| |||||  |     
T  49802770 tatgaaaatctaacagtcccttttat-ataagtagatcgaatagttgaaataaacaaaattaatgaggtctacgatagaccacttttaaggttggtacac 49802868  T
Q  226 tataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
     ||| |||||| ||||| |||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||| || ||||||||||||||||||||||    
T  49802869 catagacatttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaa 49802968  T
Q  326 atgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||    
T  49802969 atgaaaacatgaaattaaataagggaccaaacgatctaacaagcct 49803014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 186 - 371
Target Start/End: Complemental strand, 15232936 - 15232749
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaat 283  Q
    ||||||| |||| ||||||||||| | ||  |||||| | |||| ||||  || | |||||| ||||| |||  |||||||||||||||| |||||||||    
T  15232936 taataggatctatgatggaccacttttaaagttggtccactatatacatcatttgggttaaacttaacggtcatgatttatttggcaaacagaggaaaat 15232837  T
Q  284 gtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15232836 gtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaataagggaccaaatgatctaataagcct 15232749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 49801744 - 49801614
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||||||||| ||||||||||||||| |||  ||| ||||||||  ||||| ||| ||||||||||||||||||||||||||||| || |||    
T  49801744 gttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaa 49801646  T
Q  340 ttaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||| ||||||||||||||    
T  49801645 ttaaataagggaccaaatgatctaataagcct 49801614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 232 - 353
Target Start/End: Original strand, 16965107 - 16965228
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||  |||| |||||||||  ||||||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  16965107 catttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaatgaaa 16965206  T
Q  332 acatgaaattaaataagggacc 353  Q
    | | ||||||||||||||||||    
T  16965207 ataagaaattaaataagggacc 16965228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 173 - 343
Target Start/End: Original strand, 15072710 - 15072881
Alignment:
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaa 271  Q
    ||||||| |||| |||||| ||||||| |||||||||||  || |||||| |  ||| |||||||  |||||||||||||| |  |||||||||||||||    
T  15072710 aaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacatttgaggttaaagttaacagacatggatttatttggcaa 15072809  T
Q  272 acggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    |||||||||||  | |||||| |||| |    |||||||||||||||||||||||||||||| |||||||||    
T  15072810 acggaggaaaaaataagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaa 15072881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 27814493 - 27814318
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaa-gttaacagtcgggatttattt 266  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| | ||  |||||| |  ||| |||||| |||||||| |||||| ||||||||||||||    
T  27814493 ggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacatttagagttaaaagttaaccgtcgggatttattt 27814394  T
Q  267 ggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||| ||||||||  |||||||| |||| |    ||||||||||| | |||| ||||||||||| ||||||||    
T  27814393 ggcaaacagaggaaaaaatgagggaccaaaaggtacgttttattaattataggactaaaatgaaaacttgaaatta 27814318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 159 - 282
Target Start/End: Complemental strand, 46110491 - 46110368
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggg 258  Q
    ||||| || ||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||| |  ||| | |||| ||||||||||||||||||| |    
T  46110491 agatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactcttaaggttggtccaccatagatatttagagttaaagttaacagtcgag 46110392  T
Q  259 atttatttggcaaacggaggaaaa 282  Q
    |||||||| |||||||||| ||||    
T  46110391 atttatttagcaaacggagaaaaa 46110368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 241 - 377
Target Start/End: Original strand, 24499644 - 24499780
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    |||||||| |||| | |||||||||||| ||||||||||||| ||||||||| ||||||  | |||||||||||||| ||||||||||||||| ||||||    
T  24499644 ttaaagttgacagaccggatttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaat 24499743  T
Q  341 taaataagggaccaaacgatctaataagccttttaaa 377  Q
    ||  || ||||||||   ||| ||||||||| |||||    
T  24499744 tatttaggggaccaacaaatcaaataagcctattaaa 24499780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 159 - 342
Target Start/End: Original strand, 50444605 - 50444788
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaac-atttggagttaaagttaacagtcgg 257  Q
    ||||| || ||||||||| ||||||| ||||| ||||||||||||| |||||| ||| |||||| |  ||| ||  |||||||||||||||||| ||  |    
T  50444605 agatcaaacggttaaaatgaacaaaattaataaggtctacgatgga-cactcttaaggttggtccaacatagacgttttggagttaaagttaacggtttg 50444703  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||| ||||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||  ||||||||    
T  50444704 gatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaatttgaaatta 50444788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 46111479 - 46111590
Alignment:
Q  243 aaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||||||||||||||||||| |||||||  ||||| || |||| |    |||||||||||||||||||||||| ||||| ||||||||    
T  46111479 aaagttaacagtcgggatttatttggcaaacgaaggaaaaaatgaggaaccaaaaggtacgttttattaattgtgggaccaaaataaaaacttgaaatta 46111578  T
Q  343 aataagggacca 354  Q
      ||||||||||    
T  46111579 tttaagggacca 46111590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 201 - 372
Target Start/End: Complemental strand, 14471024 - 14470852
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg--ggatttatttggcaaacggaggaaaatgtgagggactaaaac 298  Q
    ||||||||||| ||| |||||| | |||| || ||||| |||||| ||||||  ||  |||||||||||||||||| ||||||| |||||||||| || |    
T  14471024 tggaccactcttaaggttggtccactatagacgtttggggttaaacttaacac-cgaaggatttatttggcaaacgaaggaaaaagtgagggacttaacc 14470926  T
Q  299 gccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |    |||||||||||||||||||||||||||||| ||||||||  || |||||||   |||| ||||||||||    
T  14470925 gtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccattggatcaaataagcctt 14470852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 233 - 370
Target Start/End: Original strand, 52628854 - 52628991
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||| ||||| || | |||||||||||||||||||||||||  |||||||| |||| |    |||||||||||||||||||||||| ||||    
T  52628854 atttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaa 52628953  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcc 370  Q
    | ||||||||  ||||||||| |  |||| ||||||||    
T  52628954 cttgaaattatttaagggaccgatagatcaaataagcc 52628991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 256 - 342
Target Start/End: Complemental strand, 16123399 - 16123313
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||||||||| |||||  |||||||||||||||  | ||||||||||||||| |||||||||||||| | ||||||    
T  16123399 gggatttatttggcaaacggaagaaaaaatgagggactaaaacgtgaattttattaattgtggaaccaaaatgaaaactttaaatta 16123313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 45584989 - 45585099
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    |||||||  ||||| ||||| ||| |||||||||||||||||||||||||| |||| |||| |||| |    |||||||||||||| |||||||||||||    
T  45584989 catttgggtttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaa 45585088  T
Q  332 acatgaaatta 342  Q
    || ||||||||    
T  45585089 acttgaaatta 45585099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 168 - 342
Target Start/End: Original strand, 14477706 - 14477881
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg--ggatttatt 265  Q
    |||||||||| | |||| ||||   ||||| | ||||| ||||| ||||||| ||||  ||| |||||| |||||||| |||||| |||  |||||||||    
T  14477706 ggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccatagacatttagagttaaacttaaca-tcgaaggatttatt 14477804  T
Q  266 tggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||| |||| |||||||||| |||||    ||||||||||||||||| |||| ||||||| | ||||||    
T  14477805 tggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaatta 14477881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 259 - 355
Target Start/End: Original strand, 51042350 - 51042445
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||||||||| ||||   ||||||||||||||  | |||||||||||||||||||||||||||||   |||||||| |||||||||||    
T  51042350 atttatttggcaaacggagaaaaaaa-gagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaattaagggaccaa 51042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 326
Target Start/End: Original strand, 44999368 - 44999535
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacag-tcgg 257  Q
    ||||| ||||||| || |||| | || ||||| | |||| | || |||||||| | |||||||| |  ||| ||||||   |||||||||||||| | ||    
T  44999368 agatcaaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattggtccaccatagacatttaaggttaaagttaacagctagg 44999467  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaa 326  Q
    |||||||||||||||| ||||||||  ||||| || ||||||||| |||||||||||||||||| ||||    
T  44999468 gatttatttggcaaacagaggaaaaaatgagg-acgaaaacgccaattttattaattgtgggactaaaa 44999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 373
Target Start/End: Complemental strand, 41872686 - 41872571
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    ||||||||||||||||||||||||| ||||| |||| |||||    |||||||||||||  || |||||||||||  |||||||||  |||||||||       
T  41872686 gatttatttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaagttgaaattaatcaagggaccatta 41872587  T
Q  358 gatctaataagccttt 373  Q
    |||| |||||||||||    
T  41872586 gatcaaataagccttt 41872571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 15071453 - 15071355
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||| ||||||||||||| ||||||||| |||||     ||||||||||| || ||||||||||||||| ||||||||  || ||||||||    
T  15071453 ggatttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaa 15071355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 343
Target Start/End: Original strand, 44278354 - 44278440
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    |||| |||||||||||||||| ||||  |||||||| ||||||    |||||||||| ||||||||||||||||||| |||||||||    
T  44278354 ggatctatttggcaaacggagaaaaaaatgagggaccaaaacgtacgttttattaatcgtgggaccaaaatgaaaacttgaaattaa 44278440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 48030001 - 48030067
Alignment:
Q  60 aagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||  ||||||||    
T  48030001 aagaaattgggatttttaatttagcatcaggggtattttaggtatttcacatctttagtattatttt 48030067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 155 - 371
Target Start/End: Original strand, 15746669 - 15746885
Alignment:
Q  155 aaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagt 254  Q
    ||||||||| || |||||||||||| || | ||||||| |||| | ||||||||||| |||||||||| |  ||| ||||||| ||||||| ||||||||    
T  15746669 aaatagatcaaagggttaaaattaa-aagattaataggatctatggtggaccactcttaagattggtccaccatagacatttgaagttaaacttaacagt 15746767  T
Q  255 cg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacc 353  Q
     |  |||||||||| |  ||||||  | |  | |||||| |||||   | |||||||| || |||||||||||||||||   |||||||| || ||||||    
T  15746768 ggatgatttatttgactgacggagatacaattaagggaccaaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggacc 15746867  T
Q  354 aaacgatctaataagcct 371  Q
    ||| || ||| |||||||    
T  15746868 aaatgacctattaagcct 15746885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 23091463 - 23091346
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||||||| |||| ||||| ||| ||||||    |||||||||||||   |||||||||||||  ||||||||  || ||||||||    
T  23091463 gggatttatttggcaaacggagaaaaaagtgagtgaccaaaacgtacgttttattaattgtaaaaccaaaatgaaaatgtgaaattagttaggggaccaa 23091364  T
Q  356 acgatctaataagccttt 373  Q
      |||| |||||||||||    
T  23091363 tagatcaaataagccttt 23091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 342
Target Start/End: Original strand, 35943380 - 35943537
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc--gggatttatttggcaaacggaggaaaat 283  Q
    ||||| |||||| | |||| |||||| ||| |||||| |  ||| |||||| | |||||| ||||||| |  ||||||||||||||||||| |||||||     
T  35943380 taataaggtctatggtggatcactcttaaggttggtccaccatagacatttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaa 35943479  T
Q  284 gtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||| |||| |||| |    |||||||||||||||||||||||| ||||  ||||||||    
T  35943480 gtga-ggaccaaaatgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 35943537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 13970781 - 13970835
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  13970781 ttttaatttatcattaggggtattttaggtatttcacatttttaacataatttta 13970835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 34351968 - 34352056
Alignment:
Q  264 tttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    |||| |||||| ||||||| ||||||||| |||| |    |||||||||||||||||||||||||||||| | ||||||  ||||||||    
T  34351968 tttgacaaacgtaggaaaaagtgagggaccaaaaggtacattttattaattgtgggaccaaaatgaaaacttaaaattatttaagggac 34352056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 372
Target Start/End: Complemental strand, 46467258 - 46467142
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||| |||||||||| |||  ||||||||  ||||   | |||||||| || |||||||||||||||||| ||||||||| ||| ||| |||    
T  46467258 gggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaaaggatcaa 46467159  T
Q  356 acgatctaataagcctt 372  Q
      || ||| ||||||||    
T  46467158 ttgacctattaagcctt 46467142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 372
Target Start/End: Complemental strand, 52627579 - 52627511
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||||||||||||||||||||||||| ||||||||  | ||||||||   |||| ||||||||||    
T  52627579 ttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattggatcaaataagcctt 52627511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 372
Target Start/End: Original strand, 42245939 - 42246007
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    ||||||||||| ||| |||||||| ||||| ||||||||| |||||||  ||| |||||| ||||||||    
T  42245939 ttttattaattatggaaccaaaataaaaacttgaaattaattaagggattaaatgatctattaagcctt 42246007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Original strand, 51676130 - 51676177
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacat 120  Q
    |||||||||| ||||| || ||||||||||||||||||| ||||||||    
T  51676130 ttttaatttatcattaagggtattttaggtatttcacatttttaacat 51676177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 17241862 - 17241920
Alignment:
Q  58 aaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatcttta 116  Q
    |||| ||||| ||| |||| | ||| |||||||| ||||||||||||||||||||||||    
T  17241862 aaaaaaaattgggattttttaattaacattaggggtattttaggtatttcacatcttta 17241920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 42244695 - 42244629
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||| ||||| |||||||||||  ||||||||| ||| |||||||| || ||| ||||||    
T  42244695 ttttattaattatgggatcaaaatgaaaatttgaaattaattaaaggaccaaatgacctattaagcc 42244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 332
Target Start/End: Original strand, 48096965 - 48097111
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgt 285  Q
    ||||||| |||| | | ||||||||| ||| |||||| |  ||| |||||||  |||||| |||||||| |||||||||||| |  ||||||  |||  |    
T  48096965 taataggatctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacct 48097064  T
Q  286 gagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
     ||||||||||||   | |||||||| || |||||||||||| ||||    
T  48097065 aagggactaaaacatgagttttattagttatgggaccaaaataaaaa 48097111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 373
Target Start/End: Original strand, 33369247 - 33369316
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    ||||||||||| ||||||||||||||| || ||||||||| || | |||||   |||| |||||||||||    
T  33369247 ttttattaattatgggaccaaaatgaatacttgaaattaattaggagaccattggatcaaataagccttt 33369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 20064228 - 20064172
Alignment:
Q  316 tgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    ||||||||||||||||||  |||||||| | |||||||||| || ||| ||||||||    
T  20064228 tgggaccaaaatgaaaacgggaaattaattgagggaccaaatgagctattaagcctt 20064172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 126
Target Start/End: Complemental strand, 24303245 - 24303157
Alignment:
Q  38 tcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||  ||||||| |||||||  |||| ||| |||||||||| ||  | || || ||||||||||||| ||||| |||||||||||    
T  24303245 tcgctggagaagaagaagagaaaattaatttggaattttaatttaacagaaagggtactttaggtatttcatatcttcaacattatttt 24303157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 333
Target Start/End: Original strand, 30535674 - 30535750
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaac 333  Q
    ||||||||||| |||||||||  | || ||||| |||||||||    ||||||||||| ||| ||||||||||||||    
T  30535674 ggatttatttgacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaac 30535750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 332
Target Start/End: Complemental strand, 44276250 - 44276158
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| ||||||||| ||||||| ||| ||||| ||| |||| |||| |||  ||||||    ||||||||||| || ||||||||||||||    
T  44276250 gttaaacttaacagtcaggatttaattgacaaacagagaaaaaagtgaaggatcaaaacgtacgttttattaattatgagaccaaaatgaaaa 44276158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 29 - 370
Target Start/End: Complemental strand, 29380533 - 29380189
Alignment:
Q  29 agaagatgctcgctgggaaagaagagga---gaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattt 125  Q
    ||||||||||||||||  ||||||| ||   | ||| ||||| ||| ||||||||| ||||| ||| |||||||||||||||| ||||||| || |||||    
T  29380533 agaagatgctcgctggagaagaagaagaagtggaaacaaattgggatttttaatttggcatttggggtattttaggtatttcatatctttagcaatattt 29380434  T
Q  126 tatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctat 225  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| | ||| ||| || |     
T  29380433 tgtgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccac 29380334  T
Q  226 tataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
     ||| ||||||| ||||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||    
T  29380333 catatacatttgaagttaaaattaacggtcgggatttatttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaa 29380234  T
Q  326 atgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||    
T  29380233 atgaaaacaagaaattaaataagggaccaaatgatctaataagcc 29380189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 63 - 371
Target Start/End: Original strand, 17838950 - 17839258
Alignment:
Q  63 aaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtcccttttatgataaatagat 162  Q
    ||||| ||| |||||||||  |||||||| |||||||||||||||| ||||||| || |||||| ||| |||||||||||||||||||||||||||||||    
T  17838950 aaattgggatttttaatttgacattaggggtattttaggtatttcatatctttagcaatattttgtgaggatctaacggtcccttttatgataaatagat 17839049  T
Q  163 cgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggattt 262  Q
    |||||||||||||||||||||| ||||| ||||||| |||||| ||| | ||| ||  || |  ||  ||||||| ||||||| ||||| ||||||||||    
T  17839050 cgaatggttaaaattaacaaaattaataaggtctacaatggactacttttaaggttaatccaccatctacatttgaagttaaaattaacggtcgggattt 17839149  T
Q  263 atttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatct 362  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17839150 atttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaattaaataagggaccaaacgatct 17839249  T
Q  363 aataagcct 371  Q
    |||||||||    
T  17839250 aataagcct 17839258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 44 - 372
Target Start/End: Original strand, 23397158 - 23397474
Alignment:
Q  44 ggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtc 143  Q
    |||||||||||||||||||||| | ||| ||||||||| ||||||||| ||||||||||| ||||||     || | |       |||||||||||||||    
T  23397158 ggaaagaagaggagaaaagaaagtgggatttttaatttggcattaggggtattttaggtacttcaca-----aaaagt-------gaagatctaacggtc 23397245  T
Q  144 ccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagtta 243  Q
    | ||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||| ||||| ||| | ||| |||||| |  ||| ||||||| |||||    
T  23397246 cattttatgataaatagatcggatggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacatttgaagtta 23397345  T
Q  244 aagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    || ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23397346 aatttaacggtcgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaa 23397445  T
Q  344 ataagggaccaaacgatctaataagcctt 372  Q
    ||||||||||||| |||||||||||||||    
T  23397446 ataagggaccaaatgatctaataagcctt 23397474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 119 - 371
Target Start/End: Complemental strand, 5186806 - 5186565
Alignment:
Q  119 attattttatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagatt 218  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |          |||| |||||||||| ||||| | ||| | ||    
T  5186806 attattttatgaagatctaactgtcctttttatgataaatagatcgaatggttaaatt----------aataaggtctacgattgaccattttaaggttt 5186717  T
Q  219 ggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgg 318  Q
    | || |  ||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||  ||| ||| ||||||| |||||||||||||||||     
T  5186716 gttc-accatagatatttgaagttaaagttaacggtcgggatttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgt 5186618  T
Q  319 gaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  5186617 gaccaaaatgaaaacatgaaattaaataagggatcaaatgatctaataagcct 5186565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 233 - 381
Target Start/End: Original strand, 6702852 - 6702999
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||    
T  6702852 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga-taaaacgccatttttattaattgtgggaccaaaatgaaaa 6702950  T
Q  333 catgaaattaaataagggaccaaacgatctaataagccttttaaattct 381  Q
     ||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  6702951 tatgaaattaaataagggaccaaacgatctaataagccatttaatttct 6702999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 232 - 371
Target Start/End: Complemental strand, 23392350 - 23392211
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||| |  |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  23392350 catttggggttaaacttaacatttaggatttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtgggaccaaaatgaaa 23392251  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||| ||||||||||||||||||||| ||||||||||||||    
T  23392250 acacgaaattaaataagggaccaaatgatctaataagcct 23392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 258 - 370
Target Start/End: Complemental strand, 6701490 - 6701378
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6701490 gatttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaattaaataagggaccaaac 6701391  T
Q  358 gatctaataagcc 370  Q
    |||||||||||||    
T  6701390 gatctaataagcc 6701378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 257 - 371
Target Start/End: Original strand, 2687929 - 2688043
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2687929 ggatttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaa 2688028  T
Q  357 cgatctaataagcct 371  Q
    |||||||||||||||    
T  2688029 cgatctaataagcct 2688043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 230 - 371
Target Start/End: Original strand, 5187601 - 5187741
Alignment:
Q  230 aacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    ||||||||| |||||| ||||| ||| ||||||||||||||||||||  |||| || ||| |||||||||||| ||||||||||| ||||||||||||||    
T  5187601 aacatttgg-gttaaacttaaccgtcaggatttatttggcaaacggacaaaaaggtaaggaactaaaacgccatttttattaattatgggaccaaaatga 5187699  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  5187700 aaacatgaaattaaataagggaccaaacaatctaataagcct 5187741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 371
Target Start/End: Original strand, 32506976 - 32507145
Alignment:
Q  203 gaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgcc 301  Q
    ||||||||| ||| |||||| |  ||| | |||||| |||||| |||||||||  ||||||||||||||||| ||| |||||||||||||||||||| ||    
T  32506976 gaccactcttaaggttggtccaccatagatatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggactaaaacacc 32507075  T
Q  302 acttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    | ||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  32507076 atttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagtgaccaaacaatctaataagcct 32507145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 256 - 356
Target Start/End: Complemental strand, 2687342 - 2687242
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2687342 gggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaa 2687243  T
Q  356 a 356  Q
    |    
T  2687242 a 2687242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 241 - 372
Target Start/End: Complemental strand, 29722790 - 29722659
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||| |||||||| | ||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  29722790 ttaaatttaacagttgagatttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaattatgggatcaaaatgaaaacatgaaat 29722691  T
Q  341 taaataagggaccaaacgatctaataagcctt 372  Q
    |||||||||||||||| |||||||||| ||||    
T  29722690 taaataagggaccaaatgatctaataaacctt 29722659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 240 - 373
Target Start/End: Original strand, 18346739 - 18346871
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||||||||| ||||||||||||||| |||  ||| ||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  18346739 gttaaaattaacagtcgg-atttatttggcaaacagagacaaacgtgagggatcaaaacgccatttttattaattgtgggaccaaaatgaaaatatgaaa 18346837  T
Q  340 ttaaataagggaccaaacgatctaataagccttt 373  Q
    ||||||||||||||||| ||||||||||||||||    
T  18346838 ttaaataagggaccaaatgatctaataagccttt 18346871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 17837751 - 17837614
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| || || |||||||||| ||||||| |||||  |||||||||||||||||| ||||||||||||||| ||||||||||||    
T  17837751 catttggggttaaacttaactgttgg-atttatttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaa 17837653  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||  ||||||||||||||||||||||||||||||||||    
T  17837652 acaataaattaaataagggaccaaacgatctaataagcc 17837614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 232 - 371
Target Start/End: Original strand, 29381711 - 29381849
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| || || |||||||||| |||||||||||||  ||| ||||||||||| || ||||||||||||||||| ||||||||||    
T  29381711 catttggggttaaacttaactgttgg-atttatttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaa 29381809  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    | | ||||||||||||||||||||||||||||||||||||    
T  29381810 ataagaaattaaataagggaccaaacgatctaataagcct 29381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 231 - 370
Target Start/End: Complemental strand, 232312 - 232174
Alignment:
Q  231 acatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    ||||||||||| ||||||||||||||    
T  232312 acatttagagttaaagttaacagtttgggatttatttggcaaacggaggaaaaagtgagggactaaaacg--tgttttattaattatgggaccaaaatga 232215  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||  ||||||||  |||||||||||  |||||| ||||||    
T  232214 aaaattgaaattatttaagggaccaatggatctattaagcc 232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 284 - 371
Target Start/End: Original strand, 12256616 - 12256703
Alignment:
Q  284 gtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  12256616 gtgagggactaaaacgctatttttattaattgtgcgaccaaaacgaaaacatgaaattaaataagggaccaaacaatctaataagcct 12256703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 6452516 - 6452631
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    ||||||||||| |||||||||||||||||| ||||||||  || ||||||||     
T  6452516 ggatttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaat 6452615  T
Q  357 cgatctaataagcctt 372  Q
     |||| ||||||||||    
T  6452616 ggatcaaataagcctt 6452631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 6452395 - 6452310
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||||||||||||| ||||||||||||||||   |||||||||||| | ||||||||| |||||| ||||||||    
T  6452395 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaacttgaaatta 6452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 175 - 332
Target Start/End: Complemental strand, 12669917 - 12669759
Alignment:
Q  175 attaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgg-gatttatttggcaaac 273  Q
    ||||| |||| ||||| | |||| | ||||||||||| ||| |||||| |  ||| |||||||  |||||||||||||||  | ||||||||| ||||||    
T  12669917 attaataaaaataatatgatctatggtggaccactcttaaggttggtccaccatacacatttgaggttaaagttaacagttagagatttatttagcaaac 12669818  T
Q  274 ggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    ||||||||| |||| ||||||||||   | |||||||||||||| ||||||||| ||||    
T  12669817 ggaggaaaaagtgacggactaaaacttgagttttattaattgtgagaccaaaataaaaa 12669759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 496
Target Start/End: Original strand, 5261283 - 5261412
Alignment:
Q  370 cttttaaattcttaatctttaaatgctttaaatccaaatttnnnnnnnnnn---tatacaaagtcttacagtttgttttgataatacgtcaatcacatcc 466  Q
    |||||||||||||||  ||||||||||||||||||||||||             ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  5261283 cttttaaattcttaagttttaaatgctttaaatccaaattttaaaaaaaaaaattatacgaagtcttacagtttgttttgataatacatcaatcacatcc 5261382  T
Q  467 tccggatacaacaacctgctacgcttctca 496  Q
    ||| |||   ||||||||||||| ||||||    
T  5261383 tcctgatcacacaacctgctacgtttctca 5261412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 421 - 496
Target Start/End: Original strand, 5285335 - 5285411
Alignment:
Q  421 tatacaaagtcttacagtttgttttg-ataatacgtcaatcacatcctccggatacaacaacctgctacgcttctca 496  Q
    |||||||||||||||||||| ||||  ||||||| ||||||||||||||||||||| ||||||||||||| ||||||    
T  5285335 tatacaaagtcttacagttttttttttataatacatcaatcacatcctccggataccacaacctgctacgtttctca 5285411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 7310413 - 7310302
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    ||||||||||||||| ||||||| || ||||||||||| |||||||| ||||  ||| ||||| ||||     ||||||||||| |||||||||||||||    
T  7310413 acatttggagttaaacttaacagccgagatttatttggtaaacggagaaaaacctgaaggacttaaacatacgttttattaattatgggaccaaaatgaa 7310314  T
Q  331 aacatgaaatta 342  Q
    ||| | ||||||    
T  7310313 aacttaaaatta 7310302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 362
Target Start/End: Complemental strand, 12256614 - 12256557
Alignment:
Q  305 tttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatct 362  Q
    |||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||    
T  12256614 tttattaattttaggaccaaaataaaaatatgaaattaaataagggaccaaacgatct 12256557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 496
Target Start/End: Complemental strand, 5445889 - 5445813
Alignment:
Q  421 tatacaaagt-cttacagtttgttttgataatacgtcaatcacatcctccggatacaacaacctgctacgcttctca 496  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||| ||| | ||||||| ||||| ||||||    
T  5445889 tatacaaagttcttacagtttgtcttgataatacatcaatcacatcctcctgatcccacaacctactacgtttctca 5445813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 15730036 - 15730151
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccactttt-attaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||| ||||||||| ||||| ||||||||| |||| |    |||| |||||||||||||||||||||||||   |||||||| | |||||||||      
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaaatggaaattaattgagggaccaatg 15730135  T
Q  358 gatctaataagccttt 373  Q
     |||||||||||||||    
T  15730136 aatctaataagccttt 15730151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 233547 - 233684
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| ||||||||||||||| |  | |||||||||||||||     |||||  |||||||||||||||    ||||||||||| ||||||||||||||    
T  233547 acatttagagttaaagttaacaatttgagatttatttggcaaa-----gaaaaaatgagggactaaaacgtgttttttattaattatgggaccaaaatga 233641  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||  ||||||||  ||| |||||||  |||||| ||||||||    
T  233642 aaaattgaaattatttaaaggaccaattgatctattaagcctt 233684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 27081034 - 27080941
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataaggga 351  Q
    ||||||||| |||||||||| |||| |||||||||| ||| |  | |||||||||||||  |||||||||||||||  |||||||  |||||||    
T  27081034 gatttatttcgcaaacggagaaaaaagtgagggacttaaatgtaaattttattaattgtaagaccaaaatgaaaactcgaaattatttaaggga 27080941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 342
Target Start/End: Original strand, 34024073 - 34024154
Alignment:
Q  261 ttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||| |||||||||||||| ||||||||  |||| |    |||||||||||||||||||||||||||||  ||||||||    
T  34024073 ttatttgacaaacggaggaaaaagtgagggatcaaaatgtacattttattaattgtgggaccaaaatgaaaatttgaaatta 34024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 407
Target Start/End: Original strand, 5285280 - 5285317
Alignment:
Q  370 cttttaaattcttaatctttaaatgctttaaatccaaa 407  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5285280 cttttaaattcttaagctttaaatgctttaaatccaaa 5285317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 372
Target Start/End: Complemental strand, 34023982 - 34023882
Alignment:
Q  272 acggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||| ||||||||| |||| |    ||||||||||||||| |||||||||||||| | ||||||  | ||||||||   |||| |||||||||    
T  34023982 acggaggaaaaggtgagggaccaaaaggtacgttttattaattgtggtaccaaaatgaaaacttaaaattatttgagggaccatttgatcaaataagcct 34023883  T
Q  372 t 372  Q
    |    
T  34023882 t 34023882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 7308499 - 7308566
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||| || | |||||||||||||||| ||||||||| |||||| ||||| || ||| |||||||    
T  7308499 ttttattacttataggaccaaaatgaaaacttgaaattaattaaggggccaaatgacctattaagcct 7308566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 354
Target Start/End: Original strand, 7311706 - 7311826
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    |||||||| ||||| ||||| ||  ||||||||||||||||  ||  |||| || |||||| |||| |  || |||||||||||||||| ||||||||||    
T  7311706 catttgga-ttaaacttaactgtgaggatttatttggcaaatagataaaaaagtaagggaccaaaaggt-acgtttattaattgtgggatcaaaatgaaa 7311803  T
Q  332 acatgaaattaaataagggacca 354  Q
    || | ||||||  ||||||||||    
T  7311804 acttaaaattatttaagggacca 7311826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 348
Target Start/End: Original strand, 13847914 - 13847999
Alignment:
Q  263 atttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  13847914 atttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 13847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 26545648 - 26545693
Alignment:
Q  77 aatttagcattagggatattttaggtatttcacatctttaacatta 122  Q
    |||| |||||||||| || |||||||||||||||||||||| ||||    
T  26545648 aattaagcattaggggtagtttaggtatttcacatctttaatatta 26545693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 332
Target Start/End: Original strand, 27082196 - 27082224
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||||||||||||||||||||||||||    
T  27082196 ttttattaattgtgggaccaaaatgaaaa 27082224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 36 - 370
Target Start/End: Original strand, 30911946 - 30912280
Alignment:
Q  36 gctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    |||||||||  ||||||| |||||||||||||  || ||||||||| ||| ||||| | |||||||||||||||||||||| |||||||  |||||||||    
T  30911946 gctcgctggagaagaagaagagaaaagaaattgtgatttttaatttggcaataggggtgttttaggtatttcacatctttagcattattggatgaagatc 30912045  T
Q  136 taacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatt 235  Q
    ||| ||||||||||| ||||||||||||| ||| ||| ||||||||||| ||||| |||||| |||| |||||| | ||| |||||| |  ||| | |||    
T  30912046 taatggtcccttttaagataaatagatcggatgattagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatatt 30912145  T
Q  236 tggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacat 335  Q
    ||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30912146 tggagttaaagttaacacttgggatttatttggcaaacggagaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacat 30912245  T
Q  336 gaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||| |||||||||||||||||    
T  30912246 gaaattaaataagggactaaacgatctaataagcc 30912280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 232 - 371
Target Start/End: Complemental strand, 30910877 - 30910738
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  30910877 catttggtgttaaagttaacagtcgagatttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 30910778  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30910777 acatgaaattaaataagggaccaaacgatctaataagcct 30910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 39605344 - 39605560
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccac-tctaaagattggtctatt 226  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||| ||||||| || |||||| | | |||||||||| |      
T  39605344 tgaagatctaacggtcccttttatgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccactttttaagattggtccacc 39605443  T
Q  227 ataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaa 326  Q
    ||| ||||||  |||| |||||||| ||| ||||||||||||||||||||||||||| |||||||| ||||||    |||||||||||||||||||||||    
T  39605444 atatacatttaaagttgaagttaaccgtcaggatttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaa 39605543  T
Q  327 tgaaaacatgaaattaa 343  Q
    ||||||| |||||||||    
T  39605544 tgaaaacttgaaattaa 39605560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 159 - 373
Target Start/End: Original strand, 325092 - 325306
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggg 258  Q
    ||||| || ||||||||||||||||| ||||| |||||||||||||||||| | ||| |||||| |  ||| |||||| |||||||||||||||||||||    
T  325092 agatcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacatttagagttaaagttaacagtcggg 325191  T
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    ||||||||||||||||||||||||  |||||||| |||| |    |||||||||||||||||||||||||||||| ||||||||  | ||||||||   |    
T  325192 atttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccattag 325291  T
Q  359 atctaataagccttt 373  Q
    ||| |||||||||||    
T  325292 atcaaataagccttt 325306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 371
Target Start/End: Original strand, 33173910 - 33174079
Alignment:
Q  203 gaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgcc 301  Q
    ||||||||| ||| |||||| |  ||| |||||||| |||||| ||||||| |  ||||||||||||||||| |||||||| ||||||||||||||||||    
T  33173910 gaccactcttaaggttggtccaccatagacatttggggttaaacttaacagccaaggatttatttggcaaacagaggaaaaggtgagggactaaaacgcc 33174009  T
Q  302 acttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33174010 atttttattaaatgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 33174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 159 - 371
Target Start/End: Original strand, 22308705 - 22308918
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-g 257  Q
    ||||| ||||||| | ||||| |||  |||||  ||||| | ||||||||||| ||| | |||| |  ||| |||||||| |||||| ||||||  |  |    
T  22308705 agatcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtaggtccaccatagacatttggggttaaacttaacaaccatg 22308804  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||  || ||||||||||    
T  22308805 gatttatttggcaaacggagcaaaatgtgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaac 22308904  T
Q  358 gatctaataagcct 371  Q
    ||||||||||||||    
T  22308905 gatctaataagcct 22308918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 232 - 373
Target Start/End: Complemental strand, 22047868 - 22047727
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||| |||||||| ||||||| | ||||||||||||||||||||||||||  |||||||| ||||||    ||||||||||||||||||||||||||||    
T  22047868 catttagagttaaacttaacagccaggatttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaa 22047769  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    || ||||||||| ||||||||||   |||| |||||||||||    
T  22047768 acttgaaattaattaagggaccattggatcaaataagccttt 22047727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 22307620 - 22307506
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||| ||| |||| ||||||||||||||| ||  ||||||||||| ||| ||||||||||||||||||||||   || ||||||||    
T  22307620 gggatttatttggcaaacagagcaaaaagtgagggactaaaacacctgttttattaattatggaaccaaaatgaaaacatgaaattgtttaggggaccaa 22307521  T
Q  356 acgatctaataagcc 370  Q
    |||||||||||||||    
T  22307520 acgatctaataagcc 22307506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 155 - 356
Target Start/End: Complemental strand, 8521467 - 8521267
Alignment:
Q  155 aaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagt 254  Q
    ||||||||| || |||| ||||||| | || ||||||| |||| | ||||||| ||| ||| |||||| |  ||| |||||||| |||||||||||| ||    
T  8521467 aaatagatcaaagggttgaaattaa-ataattaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgt 8521369  T
Q  255 cgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    ||||||||||||| |  ||||||  ||| ||||||||| |||||   | |||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  8521368 cgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggacca 8521269  T
Q  355 aa 356  Q
    ||    
T  8521268 aa 8521267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 155 - 371
Target Start/End: Original strand, 1010268 - 1010483
Alignment:
Q  155 aaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagt 254  Q
    ||||||||| || |||| ||||||| | || ||||||| |||| |  |||||||||| ||| |||||| |  ||| |||||||| |||||||||||| ||    
T  1010268 aaatagatcaaagggttgaaattaa-ataattaataggatctatggcggaccactcttaaggttggtccaccatacacatttggggttaaagttaaccgt 1010366  T
Q  255 cgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    ||||||||||||| |  ||||||  ||| ||||||||| |||||   | |||||||| || |||||||||||| ||||| ||||||||| ||||||||||    
T  1010367 cgggatttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggacca 1010466  T
Q  355 aacgatctaataagcct 371  Q
    || || ||| |||||||    
T  1010467 aatgacctattaagcct 1010483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 30858031 - 30857825
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||         |||||  ||| ||||||| | ||| |||||| || |    
T  30858031 tgaagatctaatggtcccttttatgataaatagatcgaacggttaaaattaataa---------ggtctctgatagaccacttttaaggttggtccatca 30857941  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||  ||||||||||||| ||   |||||||||| |||| |||||||||| ||| |||| |||||     ||||||||||||||||||||||||    
T  30857940 tagacatttaaagttaaagttaactgttaagatttatttgacaaaaggaggaaaatctgaaggaccaaaacatacgttttattaattgtgggaccaaaat 30857841  T
Q  328 gaaaacatgaaattaa 343  Q
    |||||| | |||||||    
T  30857840 gaaaacttaaaattaa 30857825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 168 - 342
Target Start/End: Original strand, 30859085 - 30859262
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattata---aacatttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||||| |||||||||| |  |||   | ||||||| |||||| ||||| |||  || ||||    
T  30859085 ggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagacttat 30859184  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||| ||||||||||||||||||| |||||    |||||||||||||||||||||||||||||| ||||||||    
T  30859185 ttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 30859262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 342
Target Start/End: Complemental strand, 39603989 - 39603879
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||||||  |||||||||||||||||||||||||| |||||||| ||||||    ||||||||||||||||| ||||||||||    
T  39603989 catttggggttaaacttaacagtcatgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaa 39603890  T
Q  332 acatgaaatta 342  Q
    || ||||||||    
T  39603889 acttgaaatta 39603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 22049115 - 22049226
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    |||||||| |||||| |||||||  |||||||||||| ||||| |||||||| ||||||||| ||||||    ||||||||||| |||||||||||||||    
T  22049115 acatttggggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaa 22049214  T
Q  331 aacatgaaatta 342  Q
    ||| ||||||||    
T  22049215 aacttgaaatta 22049226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 27705297 - 27705406
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    |||||||| ||||||||||| ||| | |||||||||||||| |||||||||| |||||||| ||||||    |||||||||||||  |||||||||||||    
T  27705297 catttgga-ttaaagttaactgtctgtatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaa 27705395  T
Q  332 acatgaaatta 342  Q
    || ||||||||    
T  27705396 acttgaaatta 27705406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 39605243 - 39605330
Alignment:
Q  48 agaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    |||||| |||||| ||||||  || ||||||||| ||||||||| ||||||  |||||||||||| ||| ||||||||||||||||||    
T  39605243 agaagaagagaaatgaaattgagaattttaatttggcattaggggtattttttgtatttcacatcgttagcattattttatgaagatc 39605330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 7492825 - 7492877
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattattt 125  Q
    ||||||||||||||||||| || |||||||||||||||||||||  |||||||    
T  7492825 ttttaatttagcattaggggtactttaggtatttcacatctttagtattattt 7492877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 372
Target Start/End: Original strand, 8523798 - 8523866
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||| || |||||||||||||||||| ||||||||| || ||||||||| || ||| ||||||||    
T  8523798 ttttattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcctt 8523866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 370
Target Start/End: Complemental strand, 9169650 - 9169584
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||| |||||| ||||||||||| ||||||||| |||||| ||||| || ||| ||||||    
T  9169650 ttttattaattatgggactaaaatgaaaacttgaaattaattaaggggccaaatgacctattaagcc 9169584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 297
Target Start/End: Original strand, 11263574 - 11263741
Alignment:
Q  127 atgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatt 226  Q
    |||||||||||||||||| ||||||||||| || ||  || | ||||||||||||||| ||||| ||| || |||||| || | | ||| |||||  |||    
T  11263574 atgaagatctaacggtcc-ttttatgataacta-attaaaggattaaaattaacaaaattaataaggtttatgatggatcatttttaagtttggttcatt 11263671  T
Q  227 ataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaa 297  Q
    ||| ||||||| ||||||| ||||| |||   |||||||||  |||||||| ||||| ||| | |||||||    
T  11263672 atagacatttgaagttaaa-ttaactgtcacaatttatttgataaacggagaaaaatatgaagaactaaaa 11263741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 28393340 - 28393251
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  28393340 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 28393251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 33172664 - 33172623
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaac 298  Q
    ||||||||||||||||||||| ||||||||| ||||||||||    
T  33172664 ggatttatttggcaaacggagaaaaatgtgaaggactaaaac 33172623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 1102828 - 1102732
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc 255  Q
    ||||| || |||| ||||||| | || ||||| | |||| | ||||||||||| ||| ||||||||  ||| |||||||| ||||||||||||||||    
T  1102828 agatcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctaccatagacatttggggttaaagttaacagtc 1102732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 15548365 - 15548310
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaa 296  Q
    |||||| ||||||| | ||||||||||||||||||||||||||  ||||||||||||    
T  15548365 gttaaacttaacaggcaggatttatttggcaaacggaggaaaa-atgagggactaaa 15548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 373
Target Start/End: Original strand, 15941409 - 15941457
Alignment:
Q  325 aatgaaaacatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    ||||||||| ||||||||  | |||||||||||||||||||||||||||    
T  15941409 aatgaaaacttgaaattatttgagggaccaaacgatctaataagccttt 15941457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 20538117 - 20538065
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||| |||||||||||||||||  ||||||||| || |||||||||    
T  20538117 ttttattaattatgggaccaaaatgaaaatttgaaattaattaggggaccaaa 20538065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 34899003 - 34899070
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaa-ttaaataagggaccaaacgatctaataagcct 371  Q
    |||||||| || ||||||||||||||||| |||||| |||| |||||||||||  ||||||||||||||    
T  34899003 ttttattacttatgggaccaaaatgaaaa-atgaaaattaattaagggaccaatggatctaataagcct 34899070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 34894213 - 34894146
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||| ||  ||||||||||||||||   |||||||| |||||||||||  ||||||||||||||    
T  34894213 ttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaatggatctaataagcct 34894146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 325
Target Start/End: Complemental strand, 27262546 - 27262480
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
    |||||||| |||||| | |||||| |||| |||||||||||  | |||||||||||||| |||||||    
T  27262546 atttatttagcaaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaa 27262480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 41874106 - 41874018
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||| ||||| | |||||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  41874106 atttatttg-caaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 41874018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 5577542 - 5577578
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcac 109  Q
    |||||||||| |||||||| |||||||||||||||||    
T  5577542 ttttaatttatcattaggggtattttaggtatttcac 5577578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 41798004 - 41798064
Alignment:
Q  309 ttaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagc 369  Q
    ||||||||||||||||||| ||||| ||||||||  | |||||||||  |||| |||||||    
T  41798004 ttaattgtgggaccaaaataaaaacttgaaattatttgagggaccaatggatcaaataagc 41798064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 8e-90; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 128 - 367
Target Start/End: Complemental strand, 27838159 - 27837921
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||| | || |||||||||  |    
T  27838159 tgaagatctaacggtccattttatgataaatagatcgaatagttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtctacca 27838060  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| |||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||    
T  27838059 tagacatttgaagttaa-gttaacagtcaggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaat 27837961  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataa 367  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  27837960 gaaaacatgaaattaaataagggatcaaacgatctaataa 27837921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 128 - 370
Target Start/End: Original strand, 35372035 - 35372279
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| | || ||||||| |  |    
T  35372035 tgaagatctaacagtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccacttttaaaattggtccaaca 35372134  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| |||||| |||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  35372135 tagacatttgaagttaa-gttaacagtaaggatttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaat 35372233  T
Q  328 gaaaacatgaaattaaataa---gggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||| ||   |||||||||||||||||||||||    
T  35372234 gaaaacatgaaattaaaaaaggggggaccaaacgatctaataagcc 35372279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 128 - 370
Target Start/End: Complemental strand, 53613102 - 53612869
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||         ||||||| ||| |||||| | ||  |||||  || |    
T  53613102 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaataa---------ggtctacaatgaaccacttttaaagttggttcatca 53613012  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  53613011 tagacatttgaagttaaagttaacggtcgggatttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaat 53612912  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||| ||||||||||||||||  ||||| |||||||||||    
T  53612911 gaaaacaagaaattaaataagggattaaacgttctaataagcc 53612869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 128 - 371
Target Start/End: Complemental strand, 41263878 - 41263635
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||  || ||||||| | ||| ||| || |  |    
T  41263878 tgaagatctaatggtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctagaatagaccacttttaaggttgatccacca 41263779  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | |||| ||||||||||||||| | |||||||| ||| ||||||||| ||||  ||| |||| |||| |||| ||||| ||| ||||||||||||||    
T  41263778 tagatatttagagttaaagttaacacttgggatttaattgacaaacggagaaaaagatgacggaccaaaatgccatttttaataaatgtgggaccaaaat 41263679  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  41263678 gaaaatatgaaattaaataagggaccaaacgatctaataagcct 41263635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 134 - 371
Target Start/End: Original strand, 26887437 - 26887674
Alignment:
Q  134 tctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaaca 233  Q
    |||||||||||||||||| |||| |||||||||||||| |||| || |||| ||||  |||||||||| ||||||| | ||| |||||  |  ||| | |    
T  26887437 tctaacggtcccttttatcataattagatcgaatggttgaaataaataaaattaatgaggtctacgatagaccacttttaaggttggtacaccatagata 26887536  T
Q  234 tttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaac 333  Q
    |||| ||||||||||||| ||| | |||||||||| |||| ||||||||  ||||||||||||  |||| |||||||||||||||||| |||||||||||    
T  26887537 tttgaagttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgccatttttattaattgtgggacaaaaatgaaaac 26887636  T
Q  334 atgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26887637 atgaaattaaataagggaccaaacgatctaataagcct 26887674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 123 - 371
Target Start/End: Complemental strand, 38241150 - 38240903
Alignment:
Q  123 ttttatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtc 222  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||| | | ||| |||||     
T  38241150 ttttgtgaagatctaaccgtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataagctctacgatggaccatttttaag-ttggtt 38241052  T
Q  223 tattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggacc 322  Q
     |  ||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    |||||||||||||||||||    
T  38241051 caccatagacatttggagttaaacttaacagccgggatttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggacc 38240952  T
Q  323 aaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||| ||||  ||||||||   ||||||||||  |||| |||||||||    
T  38240951 aaaataaaaatttgaaattattcaagggaccaatggatcaaataagcct 38240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 159 - 371
Target Start/End: Complemental strand, 10731094 - 10730882
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggg 258  Q
    |||||||||| ||||||||||||||| ||||| ||| || ||| ||||||| | ||| |||||  |  ||| ||||||| ||||||||||||||||||||    
T  10731094 agatcgaatgattaaaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacatttgaagttaaagttaacagtcggg 10730995  T
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    ||||||||||||||||||| |||| |||| |||| |||| |||| ||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||    
T  10730994 atttatttggcaaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaacaagaaattgaataagggatcaaacg 10730895  T
Q  359 atctaataagcct 371  Q
    ||| |||||||||    
T  10730894 atccaataagcct 10730882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 127 - 371
Target Start/End: Complemental strand, 40244427 - 40244184
Alignment:
Q  127 atgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatt 226  Q
    |||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||| ||||| |||||||||||||||||| | ||| |||||| |      
T  40244427 atgaagatctaacggtccattttatgataaatagatcaaagagttaaaattaacaaaattaataaggtctacgatggaccacttttaagtttggtccacc 40244328  T
Q  227 ataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaa 326  Q
    ||| ||| ||| ||||||||||||| |||   | ||||||||||||||||||||||| |||||||| |||| |    |||||||||||||| ||||||||    
T  40244327 atagacacttgaagttaaagttaactgtc-aaaattatttggcaaacggaggaaaatttgagggaccaaaatgtacgttttattaattgtgagaccaaaa 40244229  T
Q  327 tgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||||| ||||||||  |||||||||||  |||| |||||||||    
T  40244228 tgaaaacttgaaattatttaagggaccaatggatcaaataagcct 40244184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 173 - 370
Target Start/End: Original strand, 10732048 - 10732247
Alignment:
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcgggatttatttggca 270  Q
    ||||||| | || ||||||| |||| | |||||| |||||||| |||||| |  ||| ||||  || | |||||| ||||| ||||| |||||||||| |    
T  10732048 aaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcatttgggttaaacttaaccgtcggaatttatttggta 10732147  T
Q  271 aacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||| ||||||||||||||||||    
T  10732148 aacggaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacaataaattaaataagggatcaaacgatctaataagcc 10732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 53614278 - 53614393
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  53614278 ggatttatttggcaaatagaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaataaaaacaagaaattaaataagggaccaaa 53614377  T
Q  357 cgatctaataagcctt 372  Q
    ||||||||||||||||    
T  53614378 cgatctaataagcctt 53614393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 34818326 - 34818111
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||| || || | | ||| ||| || |  |    
T  34818326 tgaagatctaatggtcccttttatgataaatagatcgaacggttaaaattaacaaaattaataaggtctatgatagatcatttttaaggttgatcaacca 34818227  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||  |||||||||||||  | ||||||||||||||||| |||||||||| |||||||| ||| |     ||||||||||||||||||||||||    
T  34818226 tagacatttaaagttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaat 34818127  T
Q  328 gaaaacatgaaattaa 343  Q
    |||||| |||||||||    
T  34818126 gaaaacttgaaattaa 34818111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 40745342 - 40745556
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||| ||||| ||||||||||| |||||| | ||| ||| |  || |    
T  40745342 tgaagatctaacggtcccttttataataaatagatcgagtaattaaaattaacaaaattaataaggtctacgatgaaccacttttaaggttgatacatca 40745441  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    |||||||||||| ||||||||||| |||  ||||||||| ||||||  |||||||| |||||||  ||||||  | |||||| ||||||| |||||||||    
T  40745442 taaacatttggaattaaagttaacggtcaagatttattttgcaaacaaaggaaaatctgagggatcaaaacgaaagttttatcaattgtgagaccaaaat 40745541  T
Q  328 gaaaacatgaaatta 342  Q
    |||||| | ||||||    
T  40745542 gaaaacttaaaatta 40745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 262 - 371
Target Start/End: Complemental strand, 35371019 - 35370910
Alignment:
Q  262 tatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatc 361  Q
    |||||| ||||| |||||||| |||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35371019 tatttgacaaacagaggaaaaggtgaaggactaaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaattaaataagggaccaaacgatc 35370920  T
Q  362 taataagcct 371  Q
    ||||||||||    
T  35370919 taataagcct 35370910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 41264642 - 41264771
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||| ||||| || | |||||||||||||||||||| |||| ||||||||  ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  41264642 ttaaacttaacggttgagatttatttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaat 41264741  T
Q  341 taaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||| ||||||||||||    
T  41264742 taaataagggaccaaacaatctaataagcc 41264771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 247 - 372
Target Start/End: Complemental strand, 26886392 - 26886268
Alignment:
Q  247 ttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaata 346  Q
    ||||||||||| ||||||||||||||| |||  ||| ||||||||  ||||| ||| |||||||||||||  |||||||||||||| |||||||||||||    
T  26886392 ttaacagtcgg-atttatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgttagaccaaaatgaaaatatgaaattaaata 26886294  T
Q  347 agggaccaaacgatctaataagcctt 372  Q
    ||||||||||| ||||||||||||||    
T  26886293 agggaccaaacaatctaataagcctt 26886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 371
Target Start/End: Complemental strand, 50809559 - 50809418
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| ||||||||||| |||||  | ||||||||||||||||||||||||| ||||||||||||||||    ||||||||||| ||||||||||||||    
T  50809559 acatttagagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatga 50809460  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||  ||||||||  |||||||||||  |||||| |||||||    
T  50809459 aaaattgaaattatttaagggaccaatagatctattaagcct 50809418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 371
Target Start/End: Original strand, 50810812 - 50810953
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||||    ||||||||||| ||||||||||||||    
T  50810812 acatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatga 50810911  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||  ||||||||  |||||||||||  |||||| |||||||    
T  50810912 aaaattgaaattatttaagggaccaatggatctattaagcct 50810953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 371
Target Start/End: Complemental strand, 50865052 - 50864911
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  | |||||||||||||||||||||||||  |||||||||||||||    ||||||||||| ||||||||||||||    
T  50865052 acatttagagttaaagttaacagtttgagatttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatga 50864953  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||  ||||||||  |||||||||||  |||||| |||||||    
T  50864952 aaaattgaaattatttaagggaccaatggatctattaagcct 50864911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 231 - 371
Target Start/End: Original strand, 50866303 - 50866444
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| ||||||||||| |||||  | ||||||||||||||||||||||||| ||||||||||||||||    ||||||||||| ||||||||||||||    
T  50866303 acatttagagttaaagttgacagtttgagatttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatga 50866402  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||  ||||||||  |||||||||||  |||||| |||||||    
T  50866403 aaaattgaaattatttaagggaccaatagatctattaagcct 50866444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 18458663 - 18458747
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||    
T  18458663 gatttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaacttgaaatta 18458747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 3209842 - 3209982
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||| ||| |||||||||| | | | ||| |||||| |  |    
T  3209842 tgaagatctaacggttcattttatgataaatagatcaaatggttaaaattaacaaaattaataaggtttacgatggactatttttaaggttggtccacca 3209941  T
Q  228 taaacatttggagtt-aaagttaacagtcgggatttatttg 267  Q
    || ||||||| |||| |||||||| ||| ||||||||||||    
T  3209942 tatacatttgaagttaaaagttaatagttgggatttatttg 3209982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 18197281 - 18197173
Alignment:
Q  234 tttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaac 333  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||  |||||||| |||| |    |||||||||||||||||||||||||||||     
T  18197281 tttggagttaaagttaacggtctggatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaat 18197182  T
Q  334 atgaaatta 342  Q
     ||||||||    
T  18197181 ttgaaatta 18197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 3817268 - 3817381
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||| |||||||||||  | ||||  |||||||||||  || |||||||||||| | |||||||||||||||||||||||||||  || |||||||||    
T  3817268 ggatttttttggcaaacgtcgcaaaagttgagggactaattcgacacttttattaaatatgggaccaaaatgaaaacatgaaattagttaggggaccaaa 3817367  T
Q  357 cgatctaataagcc 370  Q
    ||||||||||||||    
T  3817368 cgatctaataagcc 3817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 37736089 - 37736181
Alignment:
Q  260 tttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    |||||||||||||||||| |||| ||||||||||||||||    |||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaattatttaagggac 37736181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 128 - 197
Target Start/End: Complemental strand, 42592779 - 42592710
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtcta 197  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  42592779 tgaagatctaatggtccattttatgataaatagatcgaatggttaaaattaacaaaattaataaggtcta 42592710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 40745231 - 40745319
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    ||||||||||||||| ||||| ||| |||| |||| ||||||||| |||||||| ||||||||||||||| || |||||||||||||||    
T  40745231 aagaagaggagaaaataaattgggattttttatttggcattagggttattttagttatttcacatctttagcactattttatgaagatc 40745319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 285 - 370
Target Start/End: Complemental strand, 3811610 - 3811525
Alignment:
Q  285 tgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||  || |||||||||||| | |||||||||||||||||||||||||||  || || ||||||||||||||||||||    
T  3811610 tgagggactaattcgacacttttattaaatatgggaccaaaatgaaaacatgaaattagttagggtaccaaacgatctaataagcc 3811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 371
Target Start/End: Original strand, 42686151 - 42686264
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||| ||||| ||| |||| |||||||||||||| |||  ||||||||||||| ||| |||||| |||||||  |||||  ||||||| ||||     
T  42686151 gatttatttgacaaacagagaaaaaagtgagggactaaaatgcctgttttattaattgtaggatcaaaataaaaacatagaattatttaagggatcaaat 42686250  T
Q  358 gatctaataagcct 371  Q
    ||||||||||||||    
T  42686251 gatctaataagcct 42686264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 374
Target Start/End: Complemental strand, 53187693 - 53187553
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||| ||||| || ||||||||||||||||||||| ||||| ||||||||| |||    || |||||||||||||  || |||||||||||    
T  53187693 atttggggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggaccaaacataca-ttttattaattgtaagatcaaaatgaaaa 53187595  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcctttt 374  Q
    | ||||||||  || |||||||  ||||| ||||||||||||    
T  53187594 cttgaaattatttaggggaccattcgatcaaataagcctttt 53187553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 53194848 - 53194960
Alignment:
Q  231 acatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||| ||||||| |  ||||||||||||||||  |||||||| ||||||||| ||||||    ||||||||||| ||||||||||||||    
T  53194848 acattttgagttaaacttaacagacatggatttatttggcaaatagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatga 53194947  T
Q  330 aaacatgaaatta 342  Q
    |||| ||||||||    
T  53194948 aaacttgaaatta 53194960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 36176512 - 36176629
Alignment:
Q  258 gatttatttggcaaacggaggaaaatg-tgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||||||||||| ||||||||   |||||||| |||||     ||||||||||||||||||||||||||||||||||||||||  | |||||||      
T  36176512 gatttatttggcaaacagaggaaaaaaatgagggaccaaaacatacattttattaattgtgggaccaaaatgaaaacatgaaattaatcaggggaccatt 36176611  T
Q  357 cgatctaataagcctttt 374  Q
     |||| ||||||||||||    
T  36176612 ggatcaaataagcctttt 36176629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 342
Target Start/End: Complemental strand, 42685086 - 42684902
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-g 257  Q
    ||||| || |||| ||||||| |||  ||||| ||| || | ||||||||||| ||| |||||  |  ||| |||||||| |||||| |||||||||  |    
T  42685086 agatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacatttggggttaaacttaacagtcaag 42684987  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||| ||||  || ||||  ||||||||||||||| || ||||||| ||| ||| |||||||||||||| | ||||||    
T  42684986 gatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaacttaaaatta 42684902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 12107992 - 12108083
Alignment:
Q  261 ttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    |||||||||||||||||||||| ||||||||| ||||      |||||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  12107992 ttatttggcaaacggaggaaaaagtgagggaccaaaatatatgttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggac 12108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 41263970 - 41263892
Alignment:
Q  57 gaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    ||||||||||| | | ||||||||| |||||| || ||||||||||||||||| | |||| ||||||||||||||||||    
T  41263970 gaaaagaaattggaatttttaatttggcattatgggtattttaggtatttcacttatttaccattattttatgaagatc 41263892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 41544773 - 41544675
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||||||| |||||||| |||||||||| |||||    || |||||||| | |||||||||||||||| ||||||||  ||| |||||||    
T  41544773 ggatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttatattaattataggaccaaaatgaaaacttgaaattatttaatggaccaa 41544675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 42592871 - 42592793
Alignment:
Q  57 gaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    ||||||||||| | | ||||||||| |||||| || ||||||||||||||||| | |||| ||||||||||||||||||    
T  42592871 gaaaagaaattggaatttttaatttggcattatgggtattttaggtatttcacttatttaccattattttatgaagatc 42592793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 342
Target Start/End: Complemental strand, 53420428 - 53420342
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||  |||||||| |||| ||||||||| ||||||    ||||||||||||| ||||||||||||||| |||||||||    
T  53420428 gggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaatatgaaatta 53420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 373
Target Start/End: Original strand, 53624340 - 53624482
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    |||||||| ||||||  |||| ||| ||||||||||||||||| ||| |||| ||||| ||| |||| |    |||||||||||||| || |||||||||    
T  53624340 acatttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaaaatgtacgttttattaattgtgagatcaaaatgaa 53624439  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    ||| ||||||||  | ||||||||   |||| |||||||||||    
T  53624440 aacttgaaattatttgagggaccattggatcaaataagccttt 53624482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 40364430 - 40364345
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||||||||| ||||  ||||||||| |||||    ||||||||||| | |||||||||||||||| ||||||||    
T  40364430 ggatttatttggcaaacggagaaaaaaatgagggacttaaacgtacattttattaattttaggaccaaaatgaaaacttgaaatta 40364345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 238 - 342
Target Start/End: Original strand, 38242502 - 38242606
Alignment:
Q  238 gagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatga 337  Q
    |||||||| ||||| ||  ||||||||||||||||| ||  |||| ||||||||| |||| |    ||||||||||||||||| |||||||||||| |||    
T  38242502 gagttaaacttaactgtgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacgttttattaattgtgggatcaaaatgaaaacttga 38242601  T
Q  338 aatta 342  Q
    |||||    
T  38242602 aatta 38242606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 53613220 - 53613116
Alignment:
Q  31 aagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatga 130  Q
    ||||||||||||||  ||||| |||||| ||| ||||  ||  |||||||  ||||||||| |||||||||||||||| ||||||   ||||||||||||    
T  53613220 aagatgctcgctggagaagaataggagataaggaattgagaaatttaattgggcattaggggtattttaggtatttcatatcttttgtattattttatga 53613121  T
Q  131 agatc 135  Q
    |||||    
T  53613120 agatc 53613116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 53421765 - 53421852
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    |||||||||||||||||| ||| |||| ||||||||| ||||||    ||||||||||||| |||| ||||||||||| | |||||||    
T  53421765 gggatttatttggcaaacagagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggactaaaatgaaaacgtaaaattaa 53421852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 135
Target Start/End: Complemental strand, 34818402 - 34818340
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    ||||||||| | |||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  34818402 ttttaatttggtattatggatattttaggtatttcatatctttactattattttatgaagatc 34818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 39606422 - 39606476
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  39606422 ttttaatttatcattaggggtattttaggtatttcacatttttaacataatttta 39606476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 54673432 - 54673486
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  54673432 ttttaatttatcattaggggtattttaggtatttcacatttttaacataatttta 54673486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 18442358 - 18442278
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||   ||||||||  ||| |||||||||||    |||||||||||||||||||||||||||||| ||||||||    
T  18442358 atttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaatta 18442278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 19487432 - 19487352
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||   ||||||||  ||| |||||||||||    |||||||||||||||||||||||||||||| ||||||||    
T  19487432 atttatttggcaa---gaggaaaaaatgatggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaatta 19487352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 325
Target Start/End: Original strand, 27841625 - 27841783
Alignment:
Q  169 gttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttatt 265  Q
    ||||||||||| | || || |||| |||| | ||||||||||| ||| |||||| |  ||||||||   || || ||||| |||||  |||| |||||||    
T  27841625 gttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataatttaga-ttaaacttaaccatcggaatttatt 27841723  T
Q  266 tggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaa 325  Q
    || |||||| | ||||| |||| ||||||||| || | ||||||||||||||||||||||    
T  27841724 tgacaaacgaaagaaaaggtgaaggactaaaaagctatttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 37735416 - 37735303
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||| |||||| || ||||  ||||||||||||||     ||||||||||| |||||||||||||||||| | ||||||  ||| |||||||      
T  37735416 gatttatttgacaaacgaagaaaaaaatgagggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaatg 37735317  T
Q  358 gatctaataagcct 371  Q
    |||| |||||||||    
T  37735316 gatcaaataagcct 37735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 44182391 - 44182302
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | |||||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  44182391 atttatttggcaaactgtggaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 44182302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 332
Target Start/End: Complemental strand, 3208620 - 3208520
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| ||  ||||||||||| ||||||||||||||  | |||||  ||||||    ||||||||||| ||||||||||||||||    
T  3208620 catttggggttaaacttaacggtaaggatttatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaa 3208521  T
Q  332 a 332  Q
    |    
T  3208520 a 3208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 36175400 - 36175332
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacg 299  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||| ||||  ||||| || ||||||    
T  36175400 acatttggggttaaacttaacagtccggatttatttggcaaacggagaaaaaaatgaggcaccaaaacg 36175332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 11150576 - 11150497
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    ||||||| |||||||  |||| ||| |||||||||| ||||| || || ||||||||||||| ||||| |||||||||||    
T  11150576 aagaagaagagaaaattaatttggatttttaatttaacattaagggtactttaggtatttcatatcttaaacattatttt 11150497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 53622798 - 53622700
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    ||||||| |||||| ||||| || |||||||| ||||||||||||||||||| | |||||  ||||      |||||||||||||| ||||||||||||    
T  53622798 catttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatattttttattaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 3807980 - 3808069
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | | |||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  3807980 atttatttggcaaactgtgaaaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 3808069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 10731169 - 10731100
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatcttta 116  Q
    |||||||||| || | ||||| ||| |||||||||  |||||||| | ||||||||||||||||||||||    
T  10731169 aagaagaggacaacataaattgggatttttaatttgacattaggggtgttttaggtatttcacatcttta 10731100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 37981662 - 37981751
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  37981662 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 37981751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 44175693 - 44175604
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  44175693 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 44175604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 354
Target Start/End: Original strand, 3209983 - 3210033
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    |||||||||||||||||||||||||||||  | ||||||  ||||||||||    
T  3209983 ttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggacca 3210033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 173 - 342
Target Start/End: Original strand, 34819204 - 34819374
Alignment:
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttatttggc 269  Q
    ||||||| | |||||||||| |||| | ||||||||||| ||| ||| || | |||| ||||   |||| |||||| |||||||   ||| | |||||||    
T  34819204 aaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacagcaaggact-atttggc 34819302  T
Q  270 aaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||| ||| |||| |||| ||||| |||||    ||||||||||||| ||| |||||||||||| ||||||||    
T  34819303 aaacagagaaaaa-gtgaaggacttaaacgtacgttttattaattgtaggatcaaaatgaaaacttgaaatta 34819374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 48538129 - 48538075
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| ||| ||||||||||||||| || ||||| ||||||    
T  48538129 ttttaatttatcattaggggtatattaggtatttcacattttcaacataatttta 48538075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 351
Target Start/End: Original strand, 23443463 - 23443556
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataaggga 351  Q
    |||||||||||||||| || |||||  ||| ||||| ||| |    ||||||||||| |||||||||||||||||  | ||||||| |||||||    
T  23443463 gatttatttggcaaacagaagaaaagatgaaggacttaaaggtacgttttattaattttgggaccaaaatgaaaagttaaaattaattaaggga 23443556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 10338938 - 10338854
Alignment:
Q  169 gttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacag 253  Q
    ||||||||||| | || ||||||| |||| | ||||||||||| ||| |||||  |||||| |||| ||  ||||||||||||||    
T  10338938 gttaaaattaaaataattaataggatctatggtggaccactcttaaggttggttcattatagacatctgaggttaaagttaacag 10338854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 34800134 - 34800090
Alignment:
Q  82 agcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||||| || |||||||||||||||||||||  ||||||||    
T  34800134 agcattaggggtagtttaggtatttcacatctttagtattatttt 34800090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 304 - 356
Target Start/End: Original strand, 43174758 - 43174810
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||| || ||||  |||||||||||| | ||||||||||||||||||||    
T  43174758 ttttattagttatggggtcaaaatgaaaacttaaaattaaataagggaccaaa 43174810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 55328332 - 55328396
Alignment:
Q  279 aaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    |||| |||||||||||||||   | ||||||||||| || || |||||||||||| |||||||||    
T  55328332 aaaaagtgagggactaaaacatgaattttattaattatgagatcaaaatgaaaacttgaaattaa 55328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 8e-90; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 47 - 370
Target Start/End: Original strand, 29220680 - 29220994
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtccct 146  Q
    ||||||| ||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29220680 aagaagaagagaaaataaattgggatttttaatttggcattaggggtattttaggtatttcacatctttaatattattttatgaagatctaacggtccct 29220779  T
Q  147 tttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaag 246  Q
    ||||||||||||||||| || |||||||||||| ||         || |||||||||| | || | ||| || ||| |  ||||| ||||  | |||||     
T  29220780 tttatgataaatagatcaaacggttaaaattaataa---------ggcctacgatggatcgcttttaaggttcgtccaccataaatatttaaaattaaaa 29220870  T
Q  247 ttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaata 346  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  29220871 ttaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaata 29220970  T
Q  347 agggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||||||||||    
T  29220971 agggaccaaacgatctaataagcc 29220994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 47 - 370
Target Start/End: Original strand, 29333979 - 29334293
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtccct 146  Q
    ||||||| ||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29333979 aagaagaagagaaaataaattgggatttttaatttggcattaggggtattttaggtatttcacatctttaatattattttatgaagatctaacggtccct 29334078  T
Q  147 tttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaag 246  Q
    ||||||||||||||||| || |||||||||||| ||         || |||||||||| | || | ||| || ||| |  ||||| ||||  | |||||     
T  29334079 tttatgataaatagatcaaacggttaaaattaataa---------ggcctacgatggatcgcttttaaggttcgtccaccataaatatttaaaattaaaa 29334169  T
Q  247 ttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaata 346  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  29334170 ttaacagtcgggattaatttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaata 29334269  T
Q  347 agggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||||||||||    
T  29334270 agggaccaaacgatctaataagcc 29334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 47 - 369
Target Start/End: Complemental strand, 18615828 - 18615515
Alignment:
Q  47 aagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtccct 146  Q
    ||||||| ||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18615828 aagaagaagagaaaataaattgggatttttaatttggcattaggggtattttaggtatttcacatctttaatattattttatgaagatctaacggtccct 18615729  T
Q  147 tttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaag 246  Q
    ||||||||||||||||| || |||||||||||| ||         || |||||||||| | || | ||| || ||| |  ||||| ||||  | |||||     
T  18615728 tttatgataaatagatcaaacggttaaaattaataa---------ggcctacgatggatcgcttttaaggttcgtccaccataaatatttaaaattaaaa 18615638  T
Q  247 ttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaata 346  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||| |||||||||||||| |||||||||||||    
T  18615637 ttaacagtcgggatttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaattaaata 18615538  T
Q  347 agggaccaaacgatctaataagc 369  Q
    |||||||||||||||||||||||    
T  18615537 agggaccaaacgatctaataagc 18615515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 128 - 371
Target Start/End: Complemental strand, 1083228 - 1082985
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||| ||||| ||||||| || ||||||| | ||| ||| || |  |    
T  1083228 tgaagatctaatggtccattttataataaatagatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccacca 1083129  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | |||| ||||||||||||||| | |||||||| ||||||||||||| ||||  ||| |||| ||||| ||| ||||||||| ||||||||||||||    
T  1083128 tagatatttagagttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaat 1083029  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  1083028 gaaaatatgaaattaaataagggaccaaacgatataataagcct 1082985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 38 - 297
Target Start/End: Complemental strand, 6029045 - 6028787
Alignment:
Q  38 tcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatcta 137  Q
    |||||||  |||||||||||||||||| ||  || |||||||||  |  ||||| ||||||||||||||||||| ||||  |||||||||||||||||||    
T  6029045 tcgctggagaagaagaggagaaaagaacttgtgatttttaatttgac--taggggtattttaggtatttcacatatttagtattattttatgaagatcta 6028948  T
Q  138 acggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttg 237  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||| | |||| ||||| |  ||| ||||||     
T  6028947 acggtcccttttatcataaatagatcgaatggttaaaattaacaaaattattaaggtctacgatggaccacttttaagactggtccaccatatacattta 6028848  T
Q  238 gagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaa 297  Q
    |||||||||||||| |||||  |||||||||||||||| || ||||  |||||||| ||||    
T  6028847 gagttaaagttaaccgtcggaaatttatttggcaaacgaagaaaaacttgagggaccaaaa 6028787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 168 - 371
Target Start/End: Complemental strand, 29219588 - 29219382
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||| | |||||||||| |  ||| ||||   |||| |||||| |||||||| |||||||||    
T  29219588 ggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttat 29219489  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaa 364  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29219488 ttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaa 29219389  T
Q  365 taagcct 371  Q
    |||||||    
T  29219388 taagcct 29219382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 168 - 371
Target Start/End: Complemental strand, 29332887 - 29332681
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||| | |||||||||| |  ||| ||||   |||| |||||| |||||||| |||||||||    
T  29332887 ggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatttat 29332788  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaa 364  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29332787 ttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaacgatctaa 29332688  T
Q  365 taagcct 371  Q
    |||||||    
T  29332687 taagcct 29332681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 232 - 371
Target Start/End: Original strand, 18616986 - 18617125
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18616986 catttggggttaaacttaatagttgggatttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 18617085  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||||||| |||||||| ||||||||||||||    
T  18617086 acatgaaattaaataaaggaccaaatgatctaataagcct 18617125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 123 - 342
Target Start/End: Original strand, 32470446 - 32470665
Alignment:
Q  123 ttttatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtc 222  Q
    |||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | | ||| ||  ||    
T  32470446 ttttttgaagatctaacggtttcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatggaccatttttaaggtttatc 32470545  T
Q  223 tattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggacc 322  Q
     |  ||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||  ||||| ||| |||||    |||||||||||||||||||    
T  32470546 caccatagacatttggagttaaacttaacagccgggatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgttttattaattgtgggacc 32470645  T
Q  323 aaaatgaaaacatgaaatta 342  Q
    ||||| ||||| ||||||||    
T  32470646 aaaataaaaacttgaaatta 32470665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 6030717 - 6030602
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||||||||||||  | ||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6030717 gggatttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaa 6030618  T
Q  356 acgatctaataagcct 371  Q
    ||||||||||||||||    
T  6030617 acgatctaataagcct 6030602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 128 - 343
Target Start/End: Original strand, 17460570 - 17460775
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||         |||||||||| ||||||| | |||||||||| |  |    
T  17460570 tgaagatctaacggtcc-ttttataataaatagatcgaatggttaaaattaataa---------ggtctacgatagaccacttttaagattggtccacca 17460659  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||  ||||||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||    ||||||||||||||||| ||||||    
T  17460660 tagacatttaaagttaaagttaacggtcgggatttatttgggaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaat 17460759  T
Q  328 gaaaacatgaaattaa 343  Q
    |||||| |||||||||    
T  17460760 gaaaacttgaaattaa 17460775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 371 - 509
Target Start/End: Original strand, 22585460 - 22585600
Alignment:
Q  371 ttttaaattcttaatctttaaatgctttaaatccaaatttnnnnnnnnnn--tatacaaagtcttacagtttgttttgataatacgtcaatcacatcctc 468  Q
    ||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22585460 ttttaaattcttaatctttaaatgctttaaatccaaatttaaaaaaaaaaattatacaaagtcttacagtttgttttgataatacgtcaatcacatcctc 22585559  T
Q  469 cggatacaacaacctgctacgcttctcatgactctgtggtg 509  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  22585560 cggatacaacaacctgctacgcttctcaggactctttggtg 22585600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 34469068 - 34468957
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||||||||| || |||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34469068 gatttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaattaaataagggaccaaac 34468969  T
Q  358 gatctaataagc 369  Q
    ||||||||||||    
T  34468968 gatctaataagc 34468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 44192453 - 44192564
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||     
T  44192453 atttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaattaaataagggaccaaaca 44192552  T
Q  359 atctaataagcc 370  Q
    ||||||||||||    
T  44192553 atctaataagcc 44192564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 126 - 370
Target Start/End: Original strand, 6032187 - 6032432
Alignment:
Q  126 tatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccac-tctaaagattggtcta 224  Q
    ||||| |||||||||||||| |||||||| || ||||| || || |||||||||  ||| ||||| ||||||||||||| ||  ||| | | |||||| |    
T  6032187 tatgatgatctaacggtcccctttatgattaaaagatcaaacggctaaaattaattaaattaataaggtctacgatggatcatgtcttatg-ttggtcaa 6032285  T
Q  225 ttataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggacca 323  Q
      ||| ||||||| ||||||||||||| |||  ||||||||||||||||| ||||||||  |  ||||||||||| ||| ||||||||||||||| ||||    
T  6032286 ccatagacatttgaagttaaagttaacggtcatggatttatttggcaaacagaggaaaaaatacgggactaaaacaccatttttattaattgtggaacca 6032385  T
Q  324 aaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||||||||    
T  6032386 aaataaaaacatgaaattgaataaaggatcaaacgatctaataagcc 6032432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 241 - 370
Target Start/End: Original strand, 1085377 - 1085504
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||| ||||| || | |||||||||||||||||||||||||||  |||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  1085377 ttaaacttaacggttgtgatttatttggcaaacggaggaaaatg--agggaccaaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaat 1085474  T
Q  341 taaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||| ||||||||||||    
T  1085475 taaataagggaccaaacaatctaataagcc 1085504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 123 - 355
Target Start/End: Complemental strand, 11316169 - 11315946
Alignment:
Q  123 ttttatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtc 222  Q
    |||| ||||||||||| |||| |||| | |||||||||||||||||||||||||||| ||         |||||||| ||||||| | | ||| ||| ||    
T  11316169 ttttgtgaagatctaatggtctctttcacgataaatagatcgaatggttaaaattaataa---------ggtctacggtggaccatttttaaggttgatc 11316079  T
Q  223 tattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggacc 322  Q
     |  ||| ||||||||| ||||| ||||||| ||||||||||||||||||||||||||||  ||||||||| |||||    |||||||||||||||||||    
T  11316078 caccatagacatttggaattaaacttaacagccgggatttatttggcaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggacc 11315979  T
Q  323 aaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||| ||||||||  || ||||||||    
T  11315978 aaaatgaaaacttgaaattatttaggggaccaa 11315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 168 - 373
Target Start/End: Complemental strand, 43033282 - 43033077
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttattt 266  Q
    |||| ||||||| | || ||||||||| || | ||||||||||| ||| ||||||||  ||| |||||||  |||||| |||||| ||| ||||||||||    
T  43033282 ggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatagacatttgaggttaaacttaaca-tcgaggatttattt 43033184  T
Q  267 ggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaata 366  Q
    |||||||||||||||| ||||||||| |||| |    |||||||||||||||||||||||||||||| ||||||||  ||||||| ||   |||| ||||    
T  43033183 ggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggatcattggatcaaata 43033084  T
Q  367 agccttt 373  Q
    |||||||    
T  43033083 agccttt 43033077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 17459389 - 17459251
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||| |||| | |||||||||||||||||||||||| |||||||||| |||||    |||||||||||||| |||||||||||||    
T  17459389 catttggggttaaacttaaaagtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaa 17459290  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    || ||||||||  |||||||| ||  |||| ||||||||    
T  17459289 acttgaaattatttaagggactaatggatcaaataagcc 17459251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 256 - 370
Target Start/End: Complemental strand, 44191248 - 44191134
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||| ||||| | |||||   ||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44191248 gggatttatttgacaaacagtggaaacgatgagggactaaaatgcaatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaa 44191149  T
Q  356 acgatctaataagcc 370  Q
    |  |||| |||||||    
T  44191148 ataatcttataagcc 44191134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 240 - 371
Target Start/End: Original strand, 12359666 - 12359798
Alignment:
Q  240 gttaaagttaacag-tcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaa 338  Q
    |||||||||||||| |  ||||||||||||| |||  |||||||  |||||||| ||||||||| |||||||||||||||||| |||| |||||||||||    
T  12359666 gttaaagttaacagctacggatttatttggcgaacaaaggaaaaaatgagggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaa 12359765  T
Q  339 attaaataagggaccaaacgatctaataagcct 371  Q
    ||||  |||||||| |   ||||||||||||||    
T  12359766 attatttaagggacaaggtgatctaataagcct 12359798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 31915804 - 31915901
Alignment:
Q  29 agaagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||| |||||||||  ||||||||| ||||||||||| ||| || |||||||||||||  | || |||||||||||||||||||||||||||||||    
T  31915804 agaagaggctcgctggtgaagaagaggggaaaagaaattgggatttgtaatttagcattataggtactttaggtatttcacatctttaacattatttt 31915901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 342
Target Start/End: Original strand, 28562798 - 28562899
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||| ||||||||| ||||||||||| |||||||||||||| ||||||||| |||| |    ||||||||||| |||||||||||||||||  ||||||    
T  28562798 ttaaacttaacagtctggatttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaat 28562897  T
Q  341 ta 342  Q
    ||    
T  28562898 ta 28562899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 370
Target Start/End: Complemental strand, 249135 - 249022
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||| |||||||||| ||| ||||| |||||||| ||  || || ||||||||| | ||||||||||||||||| | ||||| |  ||||||||||||    
T  249135 ggatttttttggcaaacagagcaaaatttgagggaccaattcgacatttttattaaatatgggaccaaaatgaaaataagaaataacttaagggaccaaa 249036  T
Q  357 cgatctaataagcc 370  Q
     |||||||||||||    
T  249035 tgatctaataagcc 249022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 342
Target Start/End: Original strand, 11317287 - 11317458
Alignment:
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcgggatttatttggca 270  Q
    ||||||| | || ||||||| |||| | | ||||||||| ||| ||||||||  ||| ||||  || |||||||| ||||| ||  ||||||||||| ||    
T  11317287 aaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactgtgaggatttatttgcca 11317386  T
Q  271 aacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||  |||||||| ||||      |||||||||||||||||||||||||||||  ||||||||    
T  11317387 aacggaggaaaaattgagggaccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaatta 11317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 11547795 - 11547672
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||||||| ||||||||||| |||||| |||||||  ||||||  ||||||     ||||||||||| || |||||||||||||    
T  11547795 catttggggttaaacttaacagtcaggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgtgttttattaattatgagaccaaaatgaaa 11547696  T
Q  332 acatgaaattaaataagggaccaa 355  Q
    || ||||||||  ||| |||||||    
T  11547695 acttgaaattatttaaaggaccaa 11547672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 186 - 370
Target Start/End: Complemental strand, 35903690 - 35903506
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatg 284  Q
    ||||||| |||| | |||||||||||||| | |  ||||| ||| |||||||| |||||| ||||||| |  ||||||||||| |  ||||||  | |      
T  35903690 taataggatctatggtggaccactctaaa-agtaatctatcatagacatttggggttaaacttaacagccaaggatttatttgactgacggagatataat 35903592  T
Q  285 tgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||| |||||   |||||||||| || |||||||||||||||||| ||||||||| ||| |||||||| || ||| ||||||    
T  35903591 tgagggaccaaaacatgacttttattagttatgggaccaaaatgaaaacttgaaattaattaaaggaccaaatgacctattaagcc 35903506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 356
Target Start/End: Complemental strand, 34512942 - 34512826
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| |||||||||  |||||||||| | |||||||| |||| |||||||  |||||   | ||||||||||| ||||||||||||||||||  | ||    
T  34512942 gttaaacttaacagtcatgatttatttgactaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaactggtaa 34512843  T
Q  340 ttaaataagggaccaaa 356  Q
    |||| || |||||||||    
T  34512842 ttaattaggggaccaaa 34512826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 1083317 - 1083243
Alignment:
Q  57 gaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaa 131  Q
    ||||||||||| | | ||||||||| |||||| || ||||||||||||||||| | |||| ||||||||||||||    
T  1083317 gaaaagaaattggaatttttaatttggcattatgggtattttaggtatttcacttatttaccattattttatgaa 1083243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 7437766 - 7437851
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| | |||||||||||||  |||||||| ||||      |||||||||||||||||||||||||||||| ||||||||    
T  7437766 ggatttattttgtaaacggaggaaaaattgagggaccaaaatatacgttttattaattgtgggaccaaaatgaaaacttgaaatta 7437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 28561477 - 28561382
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    ||||||||| |||||| ||||||| ||||||||| |||| |  || |||||||||||||| ||||||||||||||| | ||||||  ||||||||||    
T  28561477 atttatttgacaaacgtaggaaaaggtgagggaccaaaa-gatacgttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggacca 28561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 352
Target Start/End: Complemental strand, 36010681 - 36010593
Alignment:
Q  264 tttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    ||||||||||| ||||||| ||||||||||||||      |||||||||| ||  ||||||||||||||||||||||||  ||||||||    
T  36010681 tttggcaaacgaaggaaaaagtgagggactaaaatatacgttttattaatcgtaagaccaaaatgaaaacatgaaattatttaagggac 36010593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 43034477 - 43034561
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||| |||||||||||||| ||||||||| |||| |    |||||||||||||| ||  ||||||||||| ||||||||    
T  43034477 gatttatttgacaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagattaaaatgaaaacttgaaatta 43034561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 342
Target Start/End: Original strand, 6030458 - 6030560
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccactttt-attaattgtgggaccaaaatgaaaacatgaa 338  Q
    |||||||||||| || | |||||||||||||||  ||||||||| ||| |||  ||||||  |||||| ||||||||||||| |||||||||||| | ||    
T  6030458 gttaaagttaactgttgagatttatttggcaaatagaggaaaatatgaaggatcaaaacg-tacttttaattaattgtgggatcaaaatgaaaacttcaa 6030556  T
Q  339 atta 342  Q
    ||||    
T  6030557 atta 6030560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 32469260 - 32469174
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgc-cac-ttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||| |||||||||| |||| |||| |||| |  ||| ||||||||||||||||| |||||||||||| ||||||||    
T  32469260 ggatttatttggcaa-cggaggaaaaagtgaaggaccaaaaggtacacgttttattaattgtgggatcaaaatgaaaacttgaaatta 32469174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 18751244 - 18751298
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| |||||||||||||||| |||||||  |||||||||    
T  18751244 ttttaatttaacattaggggtattttaggtatttcaaatctttagtattatttta 18751298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 21664940 - 21664816
Alignment:
Q  231 acatttggagttaaagttaacagtcggga-tttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    ||||||| ||||||| ||||||||| | | |||||||  |||| |||||||||  ||| | ||||||||   | |||||| ||||||| |||||||||||    
T  21664940 acatttgaagttaaacttaacagtcagaaatttatttaacaaatggaggaaaaaatgaag-actaaaacagaaattttatgaattgtgtgaccaaaatga 21664842  T
Q  330 aaacatgaaattaaataagggaccaa 355  Q
    |||| ||||||||| ||| |||||||    
T  21664841 aaacttgaaattaattaaaggaccaa 21664816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 35061351 - 35061435
Alignment:
Q  287 agggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||||||||  | |||||||| || ||| |||||||||||||| | ||||||| |||||||||||| || ||| ||||||||    
T  35061351 agggactaaaacgtgagttttattagttatgg-accaaaatgaaaacttcaaattaattaagggaccaaatgacctattaagcctt 35061435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 40323060 - 40322971
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  40323060 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 40322971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 376
Target Start/End: Original strand, 102420 - 102480
Alignment:
Q  316 tgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagccttttaa 376  Q
    ||||||||||||||||||| |||||||  || ||||||||| |||| | ||||||||||||    
T  102420 tgggaccaaaatgaaaacaagaaattagttaggggaccaaatgatcaattaagccttttaa 102480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 2384477 - 2384545
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| |||||||||    
T  2384477 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaat 2384545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 37957013 - 37956961
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||| || |||||||||||||||||  ||||||||| ||||||||||||    
T  37957013 ttttattacttatgggaccaaaatgaaaatttgaaattaattaagggaccaaa 37956961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 36011648 - 36011721
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    |||||||||||||||||||  ||||  |||||||||||||||    ||||||||||| |||||  |||||||||    
T  36011648 gatttatttggcaaacggattaaaaaatgagggactaaaacgtacattttattaattatgggattaaaatgaaa 36011721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 327
Target Start/End: Complemental strand, 8265640 - 8265572
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    ||||||||||||||| | || ||| |||| ||| |||||||  | |||||||||||||| |||||||||    
T  8265640 atttatttggcaaactgtgggaaaagtgaaggattaaaacgtgagttttattaattgtgagaccaaaat 8265572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 56 - 371
Target Start/End: Original strand, 7708592 - 7708909
Alignment:
Q  56 agaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtcccttttatgata 155  Q
    ||||||||||||  || ||||||||| ||||||||| |||||||||||||||||||||| | |||||||  |||||||||||| ||||| ||||| ||||    
T  7708592 agaaaagaaattgtgatttttaatttggcattaggggtattttaggtatttcacatcttcagcattattggatgaagatctaatggtccattttaagata 7708691  T
Q  156 aatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc 255  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||| |||| |||||| | ||| |||||| |  ||| | |||| ||||||||||||||| |     
T  7708692 aatagatcggatggttagaattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatatttagagttaaagttaacactt 7708791  T
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa--acatgaaattaaataagggacc 353  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| | ||||||||||||  |||| |||||||||||||||||    
T  7708792 gggatttatttggcaaacagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatgaaaacacataaaattaaataagggacc 7708891  T
Q  354 aaacgatctaataagcct 371  Q
    ||||||||||||||||||    
T  7708892 aaacgatctaataagcct 7708909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 128 - 370
Target Start/End: Original strand, 23203829 - 23204071
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||||||| || ||||||| | ||| ||| || |  |    
T  23203829 tgaagatctaatggtccattttatgataaatatatcgaatggttaaaattaacaaaattaataaggtctacaatagaccacttttaaggttgatccacca 23203928  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | |||| ||||||||||||| | | |||||||| ||||||||||||| ||||  ||| |||| ||||||||| ||||||||| ||||||||||||||    
T  23203929 tagatatttagagttaaagttaatacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacgccatttttattaaatgtgggaccaaaat 23204028  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  23204029 gaaaatatgaaattaaataagggaccaaacgatctaataagcc 23204071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 128 - 372
Target Start/End: Original strand, 52241032 - 52241275
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||  |||||||||| | |||  ||||| |  |    
T  52241032 tgaaaatctaactgtcccttttatgataaatagatcgaatggataaaattaacaaaactaataaggtctatcatggaccacttttaaggatggtc-acca 52241130  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | ||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||| |  ||||||    ||||||||||||||| | ||||||    
T  52241131 tagatatttggagttaaagttaacggtcggaatttatttggcaaacggaggaaaagatgaggaatcaaaacgtacgttttattaattgtggaatcaaaat 52241230  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||||||||||||||||||||||| |||||||| |||| ||||||    
T  52241231 gaaaacatgaaattaaataagggatcaaacgatgtaatgagcctt 52241275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 240 - 371
Target Start/End: Original strand, 10168770 - 10168902
Alignment:
Q  240 gttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaa 338  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10168770 gttaaagttaactgtcatggatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaa 10168869  T
Q  339 attaaataagggaccaaacgatctaataagcct 371  Q
    ||||||||| |||||||||||||||||||||||    
T  10168870 attaaataatggaccaaacgatctaataagcct 10168902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 128 - 343
Target Start/End: Complemental strand, 40792989 - 40792776
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||| ||||||| || ||||||| | ||| |||||| | ||    
T  40792989 tgaagatctaacggtcccttttatgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccacttttaaggttggtccacta 40792890  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||  |||||||||||||  |||||||||||||||||||||||| ||||| |||||||| |||| |    ||||||||||||||||||||||||    
T  40792889 tagacatttaaagttaaagttaac--tcgggatttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaat 40792792  T
Q  328 gaaaacatgaaattaa 343  Q
    |||||| | |||||||    
T  40792791 gaaaacttaaaattaa 40792776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 233 - 370
Target Start/End: Original strand, 54866612 - 54866748
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    ||||||||||||| |||||||||  ||||||||||||||||||||||||| || |||||||||||| ||| ||||||||||||| |||||||||||||||    
T  54866612 atttggagttaaacttaacagtcatgatttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgt-ggaccaaaatgaaaa 54866710  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcc 370  Q
     |||||||||||||||||||||||||||||||||||||    
T  54866711 tatgaaattaaataagggaccaaacgatctaataagcc 54866748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 168 - 367
Target Start/End: Complemental strand, 7707791 - 7707589
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||||| ||| ||||||||  | | ||||   |||| ||||||| |||| ||| ||||||||    
T  7707791 ggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatttat 7707692  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaa 364  Q
    ||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  7707691 ttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggactaaaagatctaa 7707592  T
Q  365 taa 367  Q
    |||    
T  7707591 taa 7707589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 241 - 374
Target Start/End: Complemental strand, 23201973 - 23201840
Alignment:
Q  241 ttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||| ||||| || ||||||||||||||||||||||||||| ||||||||| |||| |||| ||||||||| |||||||||||||| ||||||||||||    
T  23201973 ttaaacttaacggttgggatttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaat 23201874  T
Q  341 taaataagggaccaaacgatctaataagcctttt 374  Q
    ||||||||||||||||| ||||||||||||||||    
T  23201873 taaataagggaccaaacaatctaataagcctttt 23201840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 256 - 371
Target Start/End: Complemental strand, 10167537 - 10167422
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||| ||||||||||||||| ||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10167537 gggatttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaataagggaccaa 10167438  T
Q  356 acgatctaataagcct 371  Q
    ||||||||||||||||    
T  10167437 acgatctaataagcct 10167422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 154 - 373
Target Start/End: Complemental strand, 4714235 - 4714014
Alignment:
Q  154 taaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacag 253  Q
    |||| ||||| ||||||||||||| | || | ||||   ||||| | ||||||||||| ||| ||| || |  ||| ||||||| ||||||| |||| ||    
T  4714235 taaaaagatcaaatggttaaaatttaaaatattaatgaagtctatggtggaccactcttaaggttgatccaccatagacatttgaagttaaacttaatag 4714136  T
Q  254 tcgg-gatttatttggcaaac-ggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataaggga 351  Q
    |||  |||||||||||||||  |||||| || || ||||| |||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||    
T  4714135 tcgatgatttatttggcaaaaaggaggataaggtaagggattaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaattaaataaggga 4714036  T
Q  352 ccaaacgatctaataagccttt 373  Q
    ||||||||||||||||||||||    
T  4714035 ccaaacgatctaataagccttt 4714014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 50547035 - 50546903
Alignment:
Q  240 gttaaagttaacag-tcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaa 338  Q
    |||||| ||||||| | |||||||||||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||| |||||||| |||||||    
T  50547035 gttaaacttaacaggtagggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaagacatgaa 50546936  T
Q  339 attaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||||||||| ||||||||| ||||    
T  50546935 attaaataagggaccaaatgatctaatacgcct 50546903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 73 - 342
Target Start/End: Complemental strand, 52963860 - 52963595
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtcccttttatgataaatagatcgaatggtta 172  Q
    |||||||||  ||||| || |||||||||||||||| || | ||   |||||| ||||| ||||||| ||||||||||| ||||||||||| || |||||    
T  52963860 ttttaatttgacattaagggtattttaggtatttcatatatgta---ttattt-atgaaaatctaaccgtcccttttatcataaatagatctaaaggtta 52963765  T
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaa 272  Q
    ||| |||||||  ||  | |||||| ||||||||||| | |||  ||||| |  ||| |||||||||||||||||||||||||| |||||||||| ||||    
T  52963764 aaactaacaaatttatgaaggtctatgatggaccacttttaaggctggtccaccatagacatttggagttaaagttaacagtcgagatttatttgacaaa 52963665  T
Q  273 cggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||| ||||  |||||||| |||||      ||||||||||||| ||||||||||||||| ||||||||    
T  52963664 cggagaaaaacttgagggaccaaaacatacgatttattaattgtgagaccaaaatgaaaacttgaaatta 52963595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 201 - 370
Target Start/End: Complemental strand, 13165663 - 13165494
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacg 299  Q
    ||||||||||| ||| |||||| |  ||| | ||||| ||||||| |||||||||  ||||||||||| ||||||||||||||  ||| |||| ||||||    
T  13165663 tggaccactcttaaggttggtccaccatagaaatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagatgaaggacgaaaacg 13165564  T
Q  300 ccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||| |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13165563 ccatttttattaatta-gggaccaaaatgaaaacatgaaattaaataatggaccaaacgatctaataagcc 13165494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 33231498 - 33231386
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    ||||||||||||||||| | ||||  |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  33231498 atttatttggcaaacggtgaaaaagatgagggactaaaacaccatttttattaattgtgggactaaaatgaaaacatgaaattaaataagggaccaaatg 33231399  T
Q  359 atctaataagcct 371  Q
    |||||||||||||    
T  33231398 atctaataagcct 33231386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 181 - 342
Target Start/End: Original strand, 393566 - 393728
Alignment:
Q  181 aaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagt-cgggatttatttggcaaacggagga 279  Q
    |||| ||||| |||||||||||||||||| | ||| |||||| | ||||||||||| || |||||||||||||| ||||||||||||||||||||||| |    
T  393566 aaaattaataaggtctacgatggaccacttttaaggttggtccactataaacatttagaattaaagttaacagtccgggatttatttggcaaacggagaa 393665  T
Q  280 aaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||| ||||||||| |||| |  || |||||||||||||||||||||||||||||  ||||||||    
T  393666 aaaagtgagggaccaaaa-gatactttttattaattgtgggaccaaaatgaaaatttgaaatta 393728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 165 - 342
Target Start/End: Complemental strand, 1829957 - 1829779
Alignment:
Q  165 aatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaa-gttaacagtcgggattta 263  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||||| | ||  |||||| |  ||| |||||| |||||||| |||||||||||| |||||    
T  1829957 aatggttaagattaataaaattaataaggtctacgatggaccacttttaaagttggtccacgatagacatttagagttaaaagttaacagtcggaattta 1829858  T
Q  264 tttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||| |||||| ||||||| |||||||||||||| |  || |||||||||||||||||||||||||||||| ||||||||    
T  1829857 tttgacaaacgtaggaaaaagtgagggactaaaa-gatacgttttattaattgtgggaccaaaatgaaaacttgaaatta 1829779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 54865214 - 54865109
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||| |||||||||||||||||||||||||||||| | | ||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  54865214 gatttatttgacaaacggaggaaaatgtgagggactaaaacacaa-ttttattaattatgggaccaaaatgaaaacataaaattaaataagggaccaaac 54865116  T
Q  358 gatctaa 364  Q
     ||||||    
T  54865115 aatctaa 54865109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 50548228 - 50548334
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||||||||| |||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||    |||||||||||||||    
T  50548228 ggatttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaacatga----aaataagggaccaaa 50548323  T
Q  357 cgatctaataa 367  Q
    |||||||||||    
T  50548324 cgatctaataa 50548334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 258 - 340
Target Start/End: Original strand, 33232703 - 33232785
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaat 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  33232703 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 159 - 332
Target Start/End: Complemental strand, 1587392 - 1587218
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaa-gttaacagtcgg 257  Q
    ||||| || |||||| |||||||||| ||||| ||| ||||||||| |||| | ||  |||||||| |||| |||||| |||||||| ||||||  ||||    
T  1587392 agatcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacatttagagttaaaagttaaccatcgg 1587293  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    ||||||||||||||||||||||||| ||||||||| |||| |    |||||||||||||| ||| ||||||||||    
T  1587292 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaa 1587218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 231 - 373
Target Start/End: Complemental strand, 42871232 - 42871090
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    ||||||||| ||||| ||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    ||||||||||||||||| |||||||||    
T  42871232 acatttggaattaaacttaacagtcaggatttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaa 42871133  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataagccttt 373  Q
    ||  |||||||||  | |||||||   |||| |||||||||||    
T  42871132 aatttgaaattaatcaggggaccattggatcaaataagccttt 42871090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 232 - 372
Target Start/End: Original strand, 2312462 - 2312602
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| |||  ||||||||||||||||||||||||| |||||||||| |||||    |||||||||||||||||| |||||| ||    
T  2312462 catttggggttaaacttaacggtcatgatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatggaa 2312561  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    || ||||||||  |||||||||||  |||| ||||||||||    
T  2312562 acttgaaattatctaagggaccaatggatcaaataagcctt 2312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 2311193 - 2311100
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtc 222  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||| | ||||||||||    
T  2311193 tgaagatctaacggtcc-ttttatgataaatagatcgaatggttaaaattaacaatattaataaggtctacgatagaccacttttaagattggtc 2311100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 2311052 - 2310948
Alignment:
Q  239 agttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaa 338  Q
    ||||||||||||| ||  ||||||||||||||| ||||||||||| |||||||| ||||||    |||||||||||||||||||||||||||||| ||||    
T  2311052 agttaaagttaactgttaggatttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaa 2310953  T
Q  339 attaa 343  Q
    |||||    
T  2310952 attaa 2310948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 256 - 366
Target Start/End: Complemental strand, 53204473 - 53204363
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||||  |||||||||||||| || |||||||||||||| ||||||  ||||||| |||    
T  53204473 gggatttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaacattaaattatttaagggatcaa 53204374  T
Q  356 acgatctaata 366  Q
    | |||||||||    
T  53204373 atgatctaata 53204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 53205488 - 53205573
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||||||||||| ||||||||||  ||||||||    
T  53205488 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaatta 53205573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 159 - 371
Target Start/End: Complemental strand, 6348364 - 6348152
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcggg 258  Q
    ||||| || |||||||||||  || | ||||| |||||||| ||||||||||| ||| |||||| |  ||| |||||||  |||||| |||||  || |     
T  6348364 agatcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccatagacatttgaggttaaacttaaccatcaga 6348265  T
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    ||||||||| ||||| |||||||| |||||| || |||| |    |||||||||||||||||||||||||||||| ||||||||  | ||||||||   |    
T  6348264 atttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggaccatttg 6348165  T
Q  359 atctaataagcct 371  Q
    ||| |||||||||    
T  6348164 atcaaataagcct 6348152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 1188968 - 1188869
Alignment:
Q  243 aaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||| |||| |    |||||||||||||||||||||||| ||||| ||||||||    
T  1188968 aaagttaacgttcgggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaataaaaacttgaaatta 1188869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 232 - 371
Target Start/End: Original strand, 1588069 - 1588208
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||||||   |||||||||| ||||||||||||| |||||||| | |||||    |||||||||||||||||| |||||||||    
T  1588069 catttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacattttattaattgtgggactaaaatgaaa 1588168  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    || | ||||||  | |||||||||| |||| |||||||||    
T  1588169 acttaaaattatttgagggaccaaaagatcaaataagcct 1588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 42810208 - 42810303
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    ||||||||||||||||||||||||||||||||||||| ||| |    |||||||||||||||||||||||||||||  ||||||||  ||||||||    
T  42810208 ggatttatttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggac 42810303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 342
Target Start/End: Complemental strand, 4129117 - 4129019
Alignment:
Q  244 aagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||| ||||||||||||||||||||||||| |||| || |||||| |||| |    |||||||||||||||||||||||||||||| ||||||||    
T  4129117 aagttaacggtcgggatttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaacttgaaatta 4129019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 371
Target Start/End: Complemental strand, 11968713 - 11968508
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcgggatttatt 265  Q
    |||| ||||||| | || ||||||| |||| ||||||||||||| ||| |||||| || ||| ||||  |  ||||||||||| |||| ||| |||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacataatctgagttaaagttgacagccggaatttatt 11968614  T
Q  266 tggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaat 365  Q
    |  ||||||||| ||||| |||||||| |||| |    |||||||||||||| ||||||||||||||| ||||||||  | ||| |||| | |||| |||    
T  11968613 ttacaaacggagcaaaatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaacttgaaattatttgaggaaccataagatcaaat 11968514  T
Q  366 aagcct 371  Q
    ||||||    
T  11968513 aagcct 11968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 355
Target Start/End: Complemental strand, 390354 - 390230
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    |||||||  |||||| ||||||||| |||||||||||||||||||||||| |  |||||||| ||||      |||||||||||||||||||||||||||    
T  390354 acatttgaggttaaacttaacagtcaggatttatttggcaaacggaggaagaaatgagggaccaaaatatacgttttattaattgtgggaccaaaatgaa 390255  T
Q  331 aacatgaaattaaataagggaccaa 355  Q
    ||| ||||||||  || ||||||||    
T  390254 aacttgaaattatttaggggaccaa 390230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 342
Target Start/End: Original strand, 44503670 - 44503768
Alignment:
Q  243 aaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||||||||| |||| |  || ||||||||||||| ||||||||| ||||| ||||||||    
T  44503670 aaagttaacggtcgggatttatttggcaaacagaggaaaaagtgagggaccaaaatg-tacgtttattaattgtgagaccaaaataaaaacttgaaatta 44503768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 356
Target Start/End: Original strand, 53435654 - 53435857
Alignment:
Q  154 taaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacag 253  Q
    |||| ||||| || |||||||||| | |||| ||||   ||||||| ||||||||||| ||| ||||||||  ||| ||||||  ||||||| ||||| |    
T  53435654 taaaaagatcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacatttaaagttaaacttaaccg 53435753  T
Q  254 tcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggac 352  Q
    ||  ||||||||||| | |||||||| |||  |||||| | |||||   | |||||||| || |||||||||||||||||| ||||||||| |||||||     
T  53435754 tcaaggatttatttgaccaacggaggtaaacttgaggggccaaaacatgagttttattacttatgggaccaaaatgaaaacttgaaattaattaagggat 53435853  T
Q  353 caaa 356  Q
    ||||    
T  53435854 caaa 53435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 217 - 342
Target Start/End: Original strand, 4871328 - 4871454
Alignment:
Q  217 ttggtctattataaacatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattg 315  Q
    |||||| || ||||||||||||  |||||||||||| || |||||||||||| ||||||||| |||| ||| |||||| ||||     ||||||||||||    
T  4871328 ttggtccatgataaacatttgggattaaagttaacattcagggatttatttgacaaacggagaaaaacgtgggggacttaaacatacgttttattaattg 4871427  T
Q  316 tgggaccaaaatgaaaacatgaaatta 342  Q
    | | |||||||||||||||||||||||    
T  4871428 tagaaccaaaatgaaaacatgaaatta 4871454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 6349533 - 6349643
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||  ||||||| ||||||| ||||||| ||||| ||||||||| |||| |    ||||||||||||||||||||||||||||    
T  6349533 catttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaa 6349632  T
Q  332 acatgaaatta 342  Q
    || ||||||||    
T  6349633 acttgaaatta 6349643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 258 - 342
Target Start/End: Complemental strand, 37882944 - 37882860
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||||||||||||||| ||||||||| |||| |    |||||||||||||||||| ||||||||||| ||||||||    
T  37882944 gatttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaacttgaaatta 37882860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 231 - 370
Target Start/End: Complemental strand, 53432200 - 53432060
Alignment:
Q  231 acatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||| ||||| ||| |||||||||||| | |||| ||| |||  |||||||| |||||   | |||||||| || ||||||||||||||    
T  53432200 acatttggggttaaacttaaccgtcagggatttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatga 53432101  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||| ||||||||| ||||||| ||||||| ||| ||||||    
T  53432100 aaacttgaaattaattaagggatcaaacgacctattaagcc 53432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 371
Target Start/End: Complemental strand, 24426448 - 24426336
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacg 358  Q
    |||| ||||||||||||||||||| ||||||||| |||| |    |||||||||||||| ||||||||||||||| ||||||||  | ||||||||   |    
T  24426448 atttttttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattatttgagggaccattgg 24426349  T
Q  359 atctaataagcct 371  Q
    ||| |||||||||    
T  24426348 atcaaataagcct 24426336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 373
Target Start/End: Original strand, 31968397 - 31968513
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||||||||||||||||| |||||||| |||| |||| ||||||    ||||||||||||| |||||||||||||||  | ||||||| || ||||||       
T  31968397 ggatttatttggcaaacagaggaaaaagtgaaggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaaattaaaattaattaggggaccgtt 31968496  T
Q  357 cgatctaataagccttt 373  Q
     ||||||||||||||||    
T  31968497 ggatctaataagccttt 31968513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 40793107 - 40793003
Alignment:
Q  31 aagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatga 130  Q
    |||||||||||| |  || ||||||||| | ||||||   | ||||||||| ||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  40793107 aagatgctcgctagagaataagaggagagatgaaattgacaattttaatttggcattaggggtattttaagtatttcacatcgttagcattattttatga 40793008  T
Q  131 agatc 135  Q
    |||||    
T  40793007 agatc 40793003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 173 - 375
Target Start/End: Original strand, 15449994 - 15450198
Alignment:
Q  173 aaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattata---aacatttggagttaaagttaacagtcgggatttatttggc 269  Q
    ||||||| || | ||||||| |||| | ||||||||||| ||| |||||| |  |||   |||||||||||||||| ||||| ||  | |||||||||||    
T  15449994 aaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgtaag-atttatttggc 15450092  T
Q  270 aaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagc 369  Q
    ||||||||||||| || || |||| |||||    ||||||||| |  |||| || ||||||||| ||||||||  |||||||||||   ||| |||||||    
T  15450093 aaacggaggaaaaggtaagcgacttaaacgtacgttttattaactaagggatcataatgaaaacctgaaattatttaagggaccaatgaatcaaataagc 15450192  T
Q  370 ctttta 375  Q
    ||||||    
T  15450193 ctttta 15450198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 233 - 332
Target Start/End: Original strand, 37884258 - 37884357
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||| ||||||||| |||||||||||||||||||||||||| || | |||| |||| |    ||||||||||| |||||| ||||||||||    
T  37884258 atttggggttaaacttaacagtctggatttatttggcaaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaa 37884357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 42872308 - 42872379
Alignment:
Q  261 ttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||||||||||||||||||| ||||||||| ||||||    ||||||||||| |||||||||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaa 42872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 23203737 - 23203815
Alignment:
Q  57 gaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatc 135  Q
    ||||||||||| | | ||||||||| |||||| || ||||||||||||||||| | |||| ||||||||||||||||||    
T  23203737 gaaaagaaattggaatttttaatttggcattatgggtattttaggtatttcacttatttaccattattttatgaagatc 23203815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 54485523 - 54485665
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| ||||||||||||| |||  | ||||||||||||||||||| |||||  |||||||  ||||||    ||||||||||| ||||| ||||||||    
T  54485523 acatttagagttaaagttaatagtttgtgatttatttggcaaacggatgaaaacttgagggatcaaaacgaatgttttattaattatgggatcaaaatga 54485622  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |||| ||||||||  || ||||| ||  |||||| ||||||||    
T  54485623 aaacttgaaattatttaggggactaagtgatctattaagcctt 54485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 44501628 - 44501531
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||| ||| |||| |||||||||| |||||    ||||||||||| |||||||| ||||||||| ||||||||  | |||||||||    
T  44501628 gatttatttggcaaacagagaaaaaagtgagggacttaaacgtacgttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaa 44501531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 372
Target Start/End: Original strand, 1831267 - 1831383
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||  ||| |||||||||  |||||||| |||| |    |||||||||||||||||| ||||||||||| ||||||||| | ||||||||     
T  1831267 gggatttatttgaaaaatggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaatgaaaacttgaaattaattgagggaccat 1831366  T
Q  356 acgatctaataagcctt 372  Q
      |||| ||||||||||    
T  1831367 tggatcaaataagcctt 1831383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 13166733 - 13166813
Alignment:
Q  217 ttggtctattataaacatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaa 296  Q
    |||||| || ||| ||||||| ||||||| |||||||||  |||||||||||||||||||| ||||| |||||||||||||    
T  13166733 ttggtccatcatagacatttgaagttaaacttaacagtcaaggatttatttggcaaacggatgaaaaagtgagggactaaa 13166813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 27847815 - 27847704
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaggga-ctaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||| ||||| ||| |||||||||||||||||||| |||||  | ||||| | ||||   || |||||||||||||||||||||||| |    
T  27847815 acatttggggttaaacttaaccgtctggatttatttggcaaacggaagaaaaattaagggaccgaaaaataca-ttttattaattgtgggaccaaaataa 27847717  T
Q  330 aaacatgaaatta 342  Q
    |||| ||||||||    
T  27847716 aaacttgaaatta 27847704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 355
Target Start/End: Original strand, 1190196 - 1190295
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||| ||| |||| |||||| ||| |||||    ||||||||||| |||||||||||||||||| | ||||||  | |||||||||    
T  1190196 gggatttatttggcaaacagagaaaaaagtgaggtacttaaacgtacgttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaa 1190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 343
Target Start/End: Complemental strand, 31965963 - 31965860
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||||  | |||||||||||||||||||||||||| ||||||||| |||| |    |||| |||||||| |||||| ||| ||||| |||||    
T  31965963 gttaaacttaacacccaggatttatttggcaaacggaggaaaaagtgagggaccaaaatgtacattttcttaattgtaggaccagaataaaaacttgaaa 31965864  T
Q  340 ttaa 343  Q
    ||||    
T  31965863 ttaa 31965860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 327
Target Start/End: Original strand, 49344015 - 49344085
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtg-agggactaaaacgccac-ttttattaattgtgggaccaaaat 327  Q
    ||||||||||||||||||||||||| ||| ||||||| |||| |||| ||||||||||||||||||||||||    
T  49344015 gatttatttggcaaacggaggaaaaagtgaagggacttaaac-ccacgttttattaattgtgggaccaaaat 49344085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 5169581 - 5169527
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacattatttta 127  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  5169581 ttttaatttatcattaggggtattttaggtatttcacatttttaacataatttta 5169527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 352
Target Start/End: Original strand, 11438546 - 11438668
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||| |||| |||| | ||||||||| ||||| ||||||||| ||||||||| ||||||    ||||||||||| || ||||||||| |    
T  11438546 acatttggggttaaacttaaaagtcagagatttatttagcaaatggaggaaaaagtgagggaccaaaacgagtgttttattaattatgagaccaaaataa 11438645  T
Q  330 aaacatgaaattaaataagggac 352  Q
    |||| | |||||| ||| |||||    
T  11438646 aaacttcaaattatataggggac 11438668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 332
Target Start/End: Complemental strand, 54484451 - 54484349
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||| |||||||||||||||||  | |||||||||||||||| ||||||||| | |||||| ||||||    ||||||||||| ||| |||||||| |    
T  54484451 acatttagagttaaagttaacagtttgagatttatttggcaaacagaggaaaattttagggaccaaaacgaacgttttattaattatggtaccaaaataa 54484352  T
Q  330 aaa 332  Q
    |||    
T  54484351 aaa 54484349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 14524814 - 14524954
Alignment:
Q  216 attggtctattataaacatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaatt 314  Q
    ||||||| || ||| |||||||| |||||| ||||||||  ||||||| |||| |||||||||| ||| || || |||||||||   | |||||||||||    
T  14524814 attggtccatcatagacatttggggttaaacttaacagttagggatttttttg-caaacggagggaaaagtaagagactaaaacatgagttttattaatt 14524912  T
Q  315 gtgggaccaaaatg-aaaacatgaaattaaataagggaccaa 355  Q
     ||||| ||||||| ||||| ||||||||| ||| |||||||    
T  14524913 atgggatcaaaatgaaaaacttgaaattaattaaaggaccaa 14524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 342
Target Start/End: Complemental strand, 49342728 - 49342645
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||  |||| ||||||||| |||||||||| |||||    ||||||||||||||||| |||||||||||| | ||||||    
T  49342728 atttatttaacaaatggaggaaaaagtgagggacttaaacgtacattttattaattgtgggatcaaaatgaaaacttaaaatta 49342645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 342
Target Start/End: Original strand, 27850984 - 27851022
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  27850984 ttttattaattgtgggaccaaaatgaaaacttgaaatta 27851022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 13533239 - 13533380
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    ||||||| ||||||| ||||||||| ||||||||||| |  ||||||  ||| ||||||||| |||||   | |||| ||| || ||| || || |||||    
T  13533239 acatttgaagttaaatttaacagtctggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaa 13533338  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    ||| ||||||||| ||  |||||||| || ||| ||||||||    
T  13533339 aacttgaaattaattagaggaccaaatgacctattaagcctt 13533380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 23317290 - 23317379
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  23317290 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 23317379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 52240079 - 52239903
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcgggatttatt 265  Q
    |||| ||||||| || | ||||||| |||| | ||||||||||| ||| |||||| |  ||| ||||  || | ||||||||||||  | || |||||||    
T  52240079 ggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcatttgggttaaagttaacccttggaatttatt 52239980  T
Q  266 tggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||| ||||  ||| | || ||||||    ||||||||||||||||| |||||| ||||  ||||||||    
T  52239979 tggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaatta 52239903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 47862622 - 47862551
Alignment:
Q  55 gagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||  |||| ||| |||||||||| ||||| || || ||||||||||||| ||||| |||||||||||    
T  47862622 gagaaaattaatttggatttttaatttaacattaagggtactttaggtatttcatatcttcaacattatttt 47862551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 13531195 - 13531143
Alignment:
Q  318 ggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||||||| ||||||||| |||||| ||||| || ||| ||||||    
T  13531195 ggaccaaaatgaaaacttgaaattaattaagggtccaaatgacctattaagcc 13531143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 7e-81; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 128 - 368
Target Start/End: Complemental strand, 11501420 - 11501180
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||| | ||| |||||| |  |    
T  11501420 tgaagatctaatggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacaatgaaccacttttaaggttggtccacca 11501321  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| || | ||||||||| ||||||||||||||    
T  11501320 tagacatttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgctatttttattaactgtgggaccaaaat 11501221  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataag 368  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  11501220 gaaaacatgaaattaattaaaggaccaaacgatctaataag 11501180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 44 - 377
Target Start/End: Original strand, 22337174 - 22337495
Alignment:
Q  44 ggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaagatctaacggtc 143  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||| ||||||||||| ||||||     || | |       |||||||||||||||    
T  22337174 ggaaagaagaggagaaaagaaattgagatttttaatttggcattaggggtattttaggtacttcacaa----aaaagt-------gaagatctaacggtc 22337262  T
Q  144 ccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagtta 243  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||| |||||||| || || ||  | ||| |||||| |  ||| ||||||| |||||    
T  22337263 ccttttatgataaatagatcgaaatgttaaaattaacaaaattaataaggtctacggtgtactacatttaaggttggtccaccatagacatttgaagtta 22337362  T
Q  244 aagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    || ||||| ||| ||||||||||||||||||||||||||||| ||||||| ||  |||| ||||||||||||||||| |||||||||||||||||| |||    
T  22337363 aatttaacggtcaggatttatttggcaaacggaggaaaatgtaagggactgaat-gccatttttattaattgtgggatcaaaatgaaaacatgaaactaa 22337461  T
Q  344 ataagggaccaaacgatctaataagccttttaaa 377  Q
    |||||||||||||| |||||||||||||||||||    
T  22337462 ataagggaccaaacaatctaataagccttttaaa 22337495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 128 - 370
Target Start/End: Original strand, 22538724 - 22538966
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||| ||||||||||||||||||| |||| ||||||||||| || |||| ||||||| ||||  |||||||||| |||| || | ||  |||||  |  |    
T  22538724 tgaaaatctaacggtcccttttatcataattagatcgaatgattgaaataaacaaaattaatgaggtctacgatagaccgcttttaatgttggtacacca 22538823  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||     
T  22538824 tagatatttggagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaa 22538923  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22538924 gaaaacatgaaattaaataagggaccaaacgatctaataagcc 22538966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 128 - 371
Target Start/End: Complemental strand, 13563053 - 13562819
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||| ||         ||||  | ||| |||||| | ||| |||||| ||||    
T  13563053 tgaagatctaacggtcccttttatgataaatagatcaaacggttaaaattaataa---------ggtcatcaatgaaccacttttaaggttggtccatta 13562963  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| |||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  13562962 tagacatttgaagttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgccatttttattacttgtgggaccaaaat 13562863  T
Q  328 gaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
     |||||| ||||||||||||||||| ||||||||||||||||||    
T  13562862 aaaaacaagaaattaaataagggactaaacgatctaataagcct 13562819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 123 - 342
Target Start/End: Complemental strand, 43459700 - 43459481
Alignment:
Q  123 ttttatgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtc 222  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| | | ||| ||| ||    
T  43459700 ttttgtgaagatctaacggtctcttttatgataaatagatcgaatggttaaaattaacaaaattaataaggtctacgatgtaccatttttaaggttgatc 43459601  T
Q  223 tattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggacc 322  Q
     |  ||| ||||||||||||||| ||||||| || |||||||||||||||||||||||||  ||||||||| ||||||   |||||||||||||||||||    
T  43459600 caccatagacatttggagttaaacttaacagccgagatttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggacc 43459501  T
Q  323 aaaatgaaaacatgaaatta 342  Q
    ||||||||||| ||||||||    
T  43459500 aaaatgaaaacttgaaatta 43459481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 13564221 - 13564359
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13564221 atttggggttaaacttaac-gtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaaaa 13564319  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    || ||||||||||||||||| ||| |||||||||||||||    
T  13564320 caagaaattaaataagggactaaatgatctaataagcctt 13564359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 22336115 - 22335977
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22336115 catttggggttaaacttaacattcgggatttatttggcaaactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 22336016  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||| ||||||||||||||||||||| |||||||||||||    
T  22336015 acacgaaattaaataagggaccaaaagatctaataagcc 22335977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 128 - 370
Target Start/End: Original strand, 40812486 - 40812731
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaag---taatagggtctacgatggaccactctaaagattggtcta 224  Q
    |||| |||||||||||||||||| ||||||||||||||| | |||||||||||||||    ||||| | ||||||||||| |||| | ||| |||||| |    
T  40812486 tgaaaatctaacggtcccttttaagataaatagatcgaacgattaaaattaacaaaaaaattaataagatctacgatggatcacttttaaggttggtcca 40812585  T
Q  225 ttataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaa 324  Q
      ||    ||||||||||||||| |||||||||||| |||||| ||||| ||||||||| |||||||  ||||||    ||||||||||| ||| |||||    
T  40812586 ccatggttatttggagttaaagtaaacagtcgggatatatttgacaaacagaggaaaatatgagggagcaaaacgtacgttttattaattatggaaccaa 40812685  T
Q  325 aatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  40812686 aatgaaaacatgaaattaaataagggatcaaacgatctaataagcc 40812731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 35 - 342
Target Start/End: Original strand, 32256165 - 32256485
Alignment:
Q  35 tgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatgaa--- 131  Q
    ||||||||||  |||||||||||||| ||| || | | ||||||||| | ||||||| ||||||||||| |||||||||||| ||||||||||||||       
T  32256165 tgctcgctggagaagaagaggagaaaggaa-ttggaatttttaatttggtattaggggtattttaggtagttcacatctttagcattattttatgaagat 32256263  T
Q  132 ------------gatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattg 219  Q
                ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || || ||| ||| |||||||||| | ||  |||    
T  32256264 caagaatgtgaagatctaacggtcccttttatgataaatggatcgaacggttaaaattaacaaaa-tattaaggtttacaatggaccacttttaatgttg 32256362  T
Q  220 gtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtggg 319  Q
    ||| |  ||| ||||||| ||||||||||||| || || |||||||||||||| ||||||||| ||||||||| |||| |    ||||||||||| ||||    
T  32256363 gtccaccatagacatttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaaggtacattttattaattatggg 32256462  T
Q  320 accaaaatgaaaacatgaaatta 342  Q
    |||||||||||||| ||||||||    
T  32256463 accaaaatgaaaacttgaaatta 32256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 168 - 342
Target Start/End: Complemental strand, 47454537 - 47454363
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttg 267  Q
    |||||||||||| |||| ||||| |||||||||||||||||||| ||| ||||||||  ||| |||||| ||||||||||||| ||||||||||||||||    
T  47454537 ggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccatagacatttagagttaaagttaatagtcgggatttatttg 47454438  T
Q  268 gcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||| || ||||  |||||||| |||| |    |||||||||||||||||||||||||||| | ||||||||    
T  47454437 gcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaagcttgaaatta 47454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 128 - 355
Target Start/End: Original strand, 41079711 - 41079937
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    |||| |||||||| | ||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||| | ||  ||| || |  |    
T  41079711 tgaaaatctaacgattccttttatgataaatagattgaatggttaaaatcaacaaaattaataaggtctacgatggaccacttttaatgttgttccacca 41079810  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || | ||||||||||||||||||| || ||||||||||| |||||||||||||||  | |||||| ||||||    ||||||| ||||||||||||||||    
T  41079811 tagatatttggagttaaagttaacggtagggatttatttagcaaacggaggaaaagataagggaccaaaacgtacgttttatt-attgtgggaccaaaat 41079909  T
Q  328 gaaaacatgaaattaaataagggaccaa 355  Q
     ||||   |||||||| | |||||||||    
T  41079910 aaaaaatggaaattaattgagggaccaa 41079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 159 - 370
Target Start/End: Complemental strand, 3413742 - 3413530
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc-gg 257  Q
    ||||| || |||||||||| | |||| ||||   ||||| | ||||| ||||| ||||||| || |  ||| |||| || ||||||| ||||||||  ||    
T  3413742 agatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatctgaagttaaacttaacagttagg 3413643  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||  ||  |||||||||    
T  3413642 gatttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaattatttagaggaccaaac 3413543  T
Q  358 gatctaataagcc 370  Q
    |||||||||||||    
T  3413542 gatctaataagcc 3413530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 3414839 - 3414952
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||||||||||| ||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||  || ||||| |||    
T  3414839 ggatttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattatttaggggactaaa 3414938  T
Q  357 cgatctaataagcc 370  Q
    || |||||||||||    
T  3414939 cgttctaataagcc 3414952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 231 - 367
Target Start/End: Complemental strand, 24844398 - 24844262
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    |||||||  |||||| ||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||| | || ||||| ||    
T  24844398 acatttgaggttaaacttaacagtgaggatttatttggcaaacggaagaaaatgtgagggactaaaacgccatttgtattaattgtagaacaaaaataaa 24844299  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataa 367  Q
    ||||| ||||||||||||||| ||| ||||| |||||    
T  24844298 aacataaaattaaataagggatcaatcgatccaataa 24844262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 240 - 372
Target Start/End: Original strand, 11502410 - 11502542
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||| || |||||||||||||||||| ||| ||||  |||||||||||  ||| | ||||||||| ||||||| ||||||||||||||||||    
T  11502410 gttaaacttaactgttgggatttatttggcaaacagagcaaaagttgagggactaattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaa 11502509  T
Q  340 ttaaataagggaccaaacgatctaataagcctt 372  Q
    |||  ||| ||||||||||||||||||||||||    
T  11502510 ttagttaaaggaccaaacgatctaataagcctt 11502542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 22537686 - 22537556
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| |||||||| || ||||||||||||||| |||  ||| ||||||||  |||| | || ||||| ||||||||||||||||||||||| || |||    
T  22537686 gttaaaattaacagttgg-atttatttggcaaacagagacaaacgtgagggatcaaaatgtcatttttagtaattgtgggaccaaaatgaaaatataaaa 22537588  T
Q  340 ttaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||| |||||||||||||||||||    
T  22537587 ttaaataagggagcaaacgatctaataagcct 22537556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 168 - 370
Target Start/End: Complemental strand, 32255192 - 32254987
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||||| ||| |||||| |  ||||||||   |||| |||||| ||||| ||||||||||||    
T  32255192 ggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggatttat 32255093  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaa 364  Q
    |||||||||||||||||| ||||||||  |||| |    ||||||||||| |||||||||||| ||||  ||||||||  | |||||||||| ||| |||    
T  32255092 ttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaattatttgagggaccaaatgatttaa 32254993  T
Q  365 taagcc 370  Q
    ||||||    
T  32254992 taagcc 32254987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 370
Target Start/End: Original strand, 40738843 - 40738957
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccactttt-attaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    ||||||||||||||||| ||| |||| ||||||||||||||||||  |||| ||||||| |||||||||||| |||||||||||||   || ||||||||    
T  40738843 ggatttatttggcaaacagagcaaaaagtgagggactaaaacgcctgtttttattaattatgggaccaaaataaaaacatgaaattgtttaggggaccaa 40738942  T
Q  356 acgatctaataagcc 370  Q
    |||||||||||||||    
T  40738943 acgatctaataagcc 40738957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 45454149 - 45454052
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    |||||||||||||||||||||||||| ||||||||||||||||    ||||||||||| || ||||||||||||||| ||||||||| || |||||||    
T  45454149 ggatttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaacgtgaaattaattaggggacca 45454052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 24282954 - 24283065
Alignment:
Q  231 acatttggagttaaagttaacagtcg-ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||||||||||  |  |||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||||    
T  24282954 acatttggggttaaagttaacacccatggatttatttggcaaacggaggaaaatgtgagggactaaagcgcctgtttt-ttaattgtggaaccaaaatga 24283052  T
Q  330 aaacatgaaatta 342  Q
    |||  ||||||||    
T  24283053 aaatctgaaatta 24283065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 169 - 371
Target Start/End: Original strand, 6173369 - 6173569
Alignment:
Q  169 gttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttgg 268  Q
    ||||| |||||||||| || || |||||||||||||||||| | ||  |||||| | |||| | |||| ||||||||||||| ||  || ||||||||||    
T  6173369 gttaagattaacaaaatta-taaggtctacgatggaccacttttaaagttggtccactatagatatttagagttaaagttaatagatgg-atttatttgg 6173466  T
Q  269 caaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataag 368  Q
    |||||||||||||| ||||||||| |||| |    ||||||||||| ||||  |||||||||||| ||||||||  | ||||||||   |||| ||||||    
T  6173467 caaacggaggaaaaagtgagggaccaaaatgtacgttttattaattatgggtacaaaatgaaaacttgaaattatttgagggaccattggatcaaataag 6173566  T
Q  369 cct 371  Q
    |||    
T  6173567 cct 6173569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 354
Target Start/End: Complemental strand, 47059236 - 47059122
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||| ||| |||||||||||||||||||||||||| ||||||||  ||||||    ||||||||||||| |||||||||||||||| | |||    
T  47059236 gttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtacattttattaattgtaggaccaaaatgaaaacttaaaa 47059137  T
Q  340 ttaaataagggacca 354  Q
    |||| || |||||||    
T  47059136 ttaattaggggacca 47059122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 159 - 333
Target Start/End: Original strand, 43460728 - 43460904
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat--ttggagttaaagttaacagtcg 256  Q
    ||||| || |||| ||||||| | || ||||||| |||| | ||||||||||| ||  |||||| |  ||| ||||  || |||||||| ||||| ||      
T  43460728 agatcaaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataatttgagttaaacttaactgtga 43460827  T
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaac 333  Q
    |||||||||||||||| ||||||||| |||||||||||||| |    ||||||||||||||||||||||||||||||    
T  43460828 ggatttatttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaac 43460904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 243 - 372
Target Start/End: Original strand, 47456366 - 47456495
Alignment:
Q  243 aaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||| |||||||||||||||| || |||||  |||||||| |||| |    |||||||||||||||||||||||||||||| ||||||||    
T  47456366 aaagttaacagtcgagatttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 47456465  T
Q  343 aataagggaccaaacgatctaataagcctt 372  Q
      | ||||||||   |||| ||||||||||    
T  47456466 tttgagggaccattggatcaaataagcctt 47456495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 4300054 - 4300138
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||| |||||||| |||||||||| |||||    |||||||||||||||||||||||||||||| ||||||||    
T  4300054 gatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 4300138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 13563171 - 13563067
Alignment:
Q  31 aagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatga 130  Q
    ||||||||||||||  ||||| |||||||||| ||||  || ||||||||| ||||||||| |||||||||||||||| ||||||   ||||||||||||    
T  13563171 aagatgctcgctggagaagaataggagaaaaggaattgagaattttaatttggcattaggggtattttaggtatttcatatcttttgtattattttatga 13563072  T
Q  131 agatc 135  Q
    |||||    
T  13563071 agatc 13563067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 201 - 342
Target Start/End: Original strand, 40509682 - 40509824
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgg--gatttatttggcaaacggaggaaaatgtgagggactaaaac 298  Q
    ||||||||||| ||| |||||| | |||| |||||||| |||||| ||||||  ||   ||||||||||| ||||||||||||| |||||| ||| ||||    
T  40509682 tggaccactcttaaggttggtccactatagacatttggggttaaacttaacac-cgaatgatttatttggtaaacggaggaaaaagtgaggaacttaaac 40509780  T
Q  299 gccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |    |||||||||||||||||||||||||||||| ||||||||    
T  40509781 gtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 40509824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 201 - 342
Target Start/End: Original strand, 22115112 - 22115254
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcg--ggatttatttggcaaacggaggaaaatgtgagggactaaaac 298  Q
    ||||||||||| ||| |||||| | |||| |||||||| |||||| ||||||  ||   |||||||||||  |||||||||||| |||||| ||| ||||    
T  22115112 tggaccactcttaaggttggtccactatagacatttggggttaaacttaacac-cgaangatttatttggtnaacggaggaaaaagtgaggaacttaaac 22115210  T
Q  299 gccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |    |||||||||||||||||||||||||||||| ||||||||    
T  22115211 gtacgttttattaattgtgggaccaaaatgaaaacttgaaatta 22115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 352
Target Start/End: Complemental strand, 30310259 - 30310137
Alignment:
Q  231 acatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||  ||||||||| |||||||||||||||||||||||||||  ||||| ||| ||| |    |||||||||||||||||| |||||||    
T  30310259 acatttggggttaactttaacagtctgggatttatttggcaaacggaggaaaaaatgaggaactcaaatgtacgttttattaattgtgggacaaaaatga 30310160  T
Q  330 aaacatgaaattaaataagggac 352  Q
    |||| ||||||||  ||||||||    
T  30310159 aaacttgaaattatttaagggac 30310137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 354
Target Start/End: Original strand, 45455360 - 45455474
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaa 339  Q
    |||||| ||||||| |  |||||||||||||||||||| |||| ||||||||  |||| |    |||||||||||||||||||||||||||||  |||||    
T  45455360 gttaaacttaacagccatgatttatttggcaaacggagaaaaaagtgagggatcaaaatgtacgttttattaattgtgggaccaaaatgaaaatttgaaa 45455459  T
Q  340 ttaaataagggacca 354  Q
    |||| ||||||||||    
T  45455460 ttaattaagggacca 45455474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 32603043 - 32602930
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||||||||||||| |||| ||||||||||||||||    ||||||||||| |||||||||||| ||||| ||||||||  | | |||||||      
T  32603043 gatttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaatg 32602944  T
Q  358 gatctaataagcct 371  Q
    |||| |||||||||    
T  32602943 gatcaaataagcct 32602930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 342
Target Start/End: Complemental strand, 40508489 - 40508404
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||||||||| |||||||||||| |||||||||| |||||    |||||||||||||||||| ||||||||||| ||||||||    
T  40508489 ggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaatta 40508404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 343
Target Start/End: Original strand, 47060409 - 47060566
Alignment:
Q  186 taatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgt 285  Q
    ||||| |||||| | ||||| | ||| ||| |||||| |  ||| |||||||| |||||| ||||||||| ||||||||||||||||||||  |||  ||    
T  47060409 taataaggtctatggtggactattcttaaggttggtccaccatatacatttggtgttaaacttaacagtccggatttatttggcaaacggaaaaaagggt 47060508  T
Q  286 gagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    ||||||| ||||||    ||||||||||| | |||||||||||||||| | |||||||    
T  47060509 gagggaccaaaacgtacgttttattaattataggaccaaaatgaaaacttaaaattaa 47060566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 373
Target Start/End: Complemental strand, 24281187 - 24281069
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgc-cacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggacca 354  Q
    |||||||||||||| ||||||  ||||  ||||||||||||||||    |||||||||||||||||||||||| ||||||||||||||  ||  ||| ||    
T  24281187 gggatttatttggcgaacggataaaaaattgagggactaaaacgcttgtttttattaattgtgggaccaaaataaaaacatgaaattatttagaggatca 24281088  T
Q  355 aacgatctaataagccttt 373  Q
    || |||||||||| |||||    
T  24281087 aatgatctaataaaccttt 24281069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 33096980 - 33096866
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||||||||||||||||||||| ||||||||| |||| |  | |||||||||||||||| | ||||||| ||| ||||||||  | ||||||||      
T  33096980 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtaagttttattaattgtgggcctaaaatgagaacttgaaattatttgagggaccatt 33096881  T
Q  357 cgatctaataagcct 371  Q
     |||| |||||||||    
T  33096880 ggatcaaataagcct 33096866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 304 - 359
Target Start/End: Original strand, 24844402 - 24844457
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacga 359  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  24844402 ttttattaattgtaggatcaaaatgaaaacatgaaattaaataagggatcaaacga 24844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 4298823 - 4298710
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||||||||||| |||||||| |||||||||| |||| |||| ||||||||||||||||| |||||| ||||| | ||||||  || |||||||      
T  4298823 gatttatttggcaaacagaggaaaaagtgagggacttaaac-ccacattttattaattgtgggatcaaaataaaaacttaaaattatttaggggaccatt 4298725  T
Q  357 cgatctaataagcct 371  Q
     |||| |||||||||    
T  4298724 ggatcaaataagcct 4298710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 273 - 371
Target Start/End: Original strand, 33779105 - 33779203
Alignment:
Q  273 cggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||| | ||||||||||||||  | |||||||||||||||| ||||||||||||| ||||||||  || ||||| ||  |||| |||||||||    
T  33779105 cggaggaaaaagcgagggactaaaacgtgagttttattaattgtggggccaaaatgaaaacttgaaattatttaggggactaatggatcaaataagcct 33779203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 41078884 - 41078753
Alignment:
Q  240 gttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccactttt-attaattgtgggaccaaaatgaaaacatgaa 338  Q
    |||||||||||| ||||||||||||| |||||| |||||||||| | | |||  |||| |  |||||| || ||||||||||||||||||||||   |||    
T  41078884 gttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggatcaaaa-gatactttttatcaattgtgggaccaaaatgaaaaatggaa 41078786  T
Q  339 attaaataagggaccaaacgatctaataagcct 371  Q
    ||||| | ||||||||   ||||||||||||||    
T  41078785 attaattgagggaccagcggatctaataagcct 41078753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 30333395 - 30333298
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccac-ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||| ||||||||| ||||  |||||||| |||| |  || |||||||||||||||||||||||||||||| ||||||||  || ||||||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaa-gatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 30333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Original strand, 534093 - 534165
Alignment:
Q  279 aaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataaggga 351  Q
    ||||| |||||||||||  | ||| ||||||||| |||| |||||||||||||| |||||||||| |||||||    
T  534093 aaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaattaaggga 534165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 537403 - 537331
Alignment:
Q  279 aaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataaggga 351  Q
    ||||| |||||||||||  | ||| ||||||||| |||| |||||||||||||| |||||||||| |||||||    
T  537403 aaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaattaaggga 537331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 2414946 - 2414863
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaac 251  Q
    |||| ||||||| |||| ||||||| |||| | ||||||||| | ||| |||||| |||||| |||||||| ||||||||||||    
T  2414946 ggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacatttggggttaaagttaac 2414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 22690505 - 22690402
Alignment:
Q  231 acatttggagttaaagttaacagtcgg-gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    ||||||| ||||||| ||||| ||| | |||||||||||||||| | ||||||   ||| ||| ||||||  ||||||||||||||||| || |||||||    
T  22690505 acatttgaagttaaaattaactgtccgagatttatttggcaaacaggggaaaacccgagagaccaaaacggaacttttattaattgtggaacaaaaatga 22690406  T
Q  330 aaac 333  Q
    ||||    
T  22690405 aaac 22690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 38539735 - 38539668
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||| || |||||||||||||||||| ||||||||| ||||||| |||| || ||| |||||||    
T  38539735 ttttattatttatgggaccaaaatgaaaacttgaaattaattaagggatcaaatgacctattaagcct 38539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 342
Target Start/End: Complemental strand, 11344571 - 11344533
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  11344571 ttttattaattgtgggaccaaaatgaaaacttgaaatta 11344533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 11501508 - 11501433
Alignment:
Q  29 agaagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttca 108  Q
    ||||||||||||| ||  ||||||||||    |||||| |||| ||||||||| ||||||||| ||||||||||||||||    
T  11501508 agaagatgctcgccggagaagaagagga----agaaatcaggatttttaatttggcattaggggtattttaggtatttca 11501433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 19626953 - 19626911
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatcttt 115  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  19626953 ttttaatttagcatttggggtattttaggtatttcacatcttt 19626911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 22691179 - 22691113
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctat 225  Q
    ||||| || ||||||||| ||||||| | ||| ||| |||||||||||||||| |||||||||||||    
T  22691179 agatcaaacggttaaaataaacaaaatttataaggtatacgatggaccactcttaagattggtctat 22691113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 370
Target Start/End: Original strand, 30334689 - 30334755
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||||||||| ||||||||||| ||||||||  || ||||||||  |||||| ||||||    
T  30334689 ttttattaattgtgggactaaaatgaaaacttgaaattagttaggggaccaatggatctattaagcc 30334755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 5095193 - 5095104
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  5095193 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 5095104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 231 - 372
Target Start/End: Original strand, 9662215 - 9662356
Alignment:
Q  231 acatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaa 330  Q
    ||||||| ||||||| ||||||||| ||||||||||| |  ||||||  ||| ||||||||| |||||   | |||| ||| || ||| || || |||||    
T  9662215 acatttgaagttaaatttaacagtctggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagttatggaactaagatgaa 9662314  T
Q  331 aacatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    ||| ||||||||| ||  |||||||| || ||| ||||||||    
T  9662315 aacttgaaattaattagaggaccaaatgacctattaagcctt 9662356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 257 - 342
Target Start/End: Original strand, 30311474 - 30311559
Alignment:
Q  257 ggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
    ||||||| ||||| ||| ||| ||||  ||||||||| |||||    |||||||||||||||||||||||||||||  ||||||||    
T  30311474 ggatttaattggctaacagagaaaaaaatgagggacttaaacgtatgttttattaattgtgggaccaaaatgaaaatttgaaatta 30311559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 25533252 - 25533200
Alignment:
Q  304 ttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    |||||||| || |||||||||||||||||| ||||||||| |||| |||||||    
T  25533252 ttttattagttatgggaccaaaatgaaaacttgaaattaattaagagaccaaa 25533200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 5737470 - 5737412
Alignment:
Q  58 aaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatcttta 116  Q
    |||| ||||| ||| |||| | ||| |||||||| ||||||||||||||||||||||||    
T  5737470 aaaaaaaattgggattttttaattaacattaggggtattttaggtatttcacatcttta 5737412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 44554647 - 44554764
Alignment:
Q  132 gatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaa 231  Q
    ||||||| |||| | ||||||||||| | ||| |  ||| ||||||||||||| ||||| | |||||| ||||||| | ||| | |||||| |  ||| |    
T  44554647 gatctaatggtctcctttatgataaaaaaatcaaggggtcaaaattaacaaaattaataagatctacggtggaccattataatg-ttggtccaccataga 44554745  T
Q  232 catttggagttaaagttaa 250  Q
    |||||||||||||||||||    
T  44554746 catttggagttaaagttaa 44554764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 669295 - 669386
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaac 251  Q
    ||||| || |||| |||||||||||| ||||||| |||| | ||||||||||| |||| ||||| |  ||| |||||||  ||||||||||||    
T  669295 agatcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaaga-tggtccaccatagacatttgaggttaaagttaac 669386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 9660171 - 9660119
Alignment:
Q  318 ggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcc 370  Q
    |||||||||||||||| ||||||||| |||||| ||||| || ||| ||||||    
T  9660171 ggaccaaaatgaaaacttgaaattaattaagggtccaaatgacctattaagcc 9660119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 22039186 - 22039126
Alignment:
Q  311 aattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||| ||||||||||||||||||| ||||| |  ||||||| |||| |||| |||||||||    
T  22039186 aattatgggaccaaaatgaaaacaagaaataagttaagggatcaaatgatcaaataagcct 22039126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 121
Target Start/End: Original strand, 23526552 - 23526600
Alignment:
Q  73 ttttaatttagcattagggatattttaggtatttcacatctttaacatt 121  Q
    |||||||||| ||||| || ||||||||||||||||||| |||| ||||    
T  23526552 ttttaatttatcattaagggtattttaggtatttcacatttttagcatt 23526600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 128 - 354
Target Start/End: Original strand, 109621 - 109847
Alignment:
Q  128 tgaagatctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctatta 227  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| | | | ||| |||||| |  |    
T  109621 tgaagatctaacggttcattttatgataaatagatcaaatggttaaaattaacaaaattaataaggtctacgatggactatttttaaggttggtccacca 109720  T
Q  228 taaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaat 327  Q
    || ||||||| |||||||||||| ||| |||||| ||||||||||  ||| |||| |||||||||||||| |    ||||||||||||| ||||||||||    
T  109721 tatacatttgaagttaaagttaatagttgggattcatttggcaaattgagaaaaaagtgagggactaaaatgtacgttttattaattgtaggaccaaaat 109820  T
Q  328 gaaaacatgaaattaaataagggacca 354  Q
    |||||| ||||||||  ||||||||||    
T  109821 gaaaacttgaaattatttaagggacca 109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 31 - 343
Target Start/End: Complemental strand, 52950 - 52617
Alignment:
Q  31 aagatgctcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattattttatga 130  Q
    |||||||||||| |  |||||||||||||| ||||||  || ||||||||| ||||||||| |||||||||||||||| ||| ||| |||||||||||||    
T  52950 aagatgctcgctagagaagaagaggagaaatgaaattgagaattttaattttgcattaggggtattttaggtatttcatatcgttagcattattttatga 52851  T
Q  131 agatc---------------------taacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccact 209  Q
    |||||                     ||||  |||||||| |||||||||||||||| || ||||||||| |||| ||||| ||||||| || ||||| |    
T  52850 agatcatgatcaggaaggtgaagatctaacaatcccttttgtgataaatagatcgaacggataaaattaagaaaattaataaggtctaccatagaccatt 52751  T
Q  210 ctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttat 309  Q
     | ||| |||||| |  ||| ||||||  ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||    ||||||    
T  52750 tttaaggttggtccaccatatacatttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacattttat 52651  T
Q  310 taattgtgggaccaaaatgaaaacatgaaattaa 343  Q
    ||||||||||| |||||||||||| |||||||||    
T  52650 taattgtgggatcaaaatgaaaacttgaaattaa 52617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 232 - 371
Target Start/End: Original strand, 54165 - 54304
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||| | |||||||||  |||||||||||||||||||||||||| |||||||| |||||||   |||||||||||||| ||||||||| |||    
T  54165 catttggggttatacttaacagtcacgatttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaa 54264  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    || ||||||||  | |||||||||  |||| |||||||||    
T  54265 acttgaaattatttgagggaccaatggatcaaataagcct 54304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 201 - 367
Target Start/End: Original strand, 63079 - 63246
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc-gggatttatttggcaaacggaggaaaatgtgagggactaaaacg 299  Q
    ||||||| ||| ||||||| || || ||| ||||||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  63079 tggaccattcttaagattgatccatcatagacatttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgagggactaaaacg 63178  T
Q  300 ccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataa 367  Q
    |||  |||||||||||||||||||||||||||||| |||||||  |   |||||||||||||||||||    
T  63179 ccatctttattaattgtgggaccaaaatgaaaacacgaaattatttggaggaccaaacgatctaataa 63246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 371
Target Start/End: Complemental strand, 61961 - 61848
Alignment:
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    ||||||||||||||||||| |||||  |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||  || ||||||||||    
T  61961 gatttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaattatttaggggaccaaac 61862  T
Q  358 gatctaataagcct 371  Q
    | ||||||||||||    
T  61861 gttctaataagcct 61848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 233 - 372
Target Start/End: Original strand, 726 - 863
Alignment:
Q  233 atttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaa 332  Q
    |||||| |||||||||||||||| |||||||| |||||||||||||||||| || ||| ||| ||||||| |||||||||||| ||||||||||| ||||    
T  726 atttggggttaaagttaacagtcaggatttatatggcaaacggaggaaaat-tg-gggtctataacgccatttttattaattgagggaccaaaataaaaa 823  T
Q  333 catgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  824 catgaaattaaataaaggaccaaacgatctaataaacctt 863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 133 - 372
Target Start/End: Original strand, 2365 - 2595
Alignment:
Q  133 atctaacggtcccttttatgataaatagatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataa-a 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||         |||||||||| ||||||| | ||| |||||| |  || | |    
T  2365 atctaacggtcccttttaagataaatagatcgaatggttaaaattaataa---------ggtctacgatagaccacttttaaggttggtccaccattaca 2455  T
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
     ||||||||||||||||||||||||| |||||||||| |||| ||||||||  | |||||| |||| |    ||||||||||||||||||||||||||||    
T  2456 tatttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaaggtactttttattaattgtgggaccaaaatgaaa 2555  T
Q  332 acatgaaattaaataagggaccaaacgatctaataagcctt 372  Q
    |   |||||||| | |||||||||  |||||||||||||||    
T  2556 a-tggaaattaattgagggaccaattgatctaataagcctt 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 342
Target Start/End: Complemental strand, 124136 - 123995
Alignment:
Q  201 tggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgc 300  Q
    ||||||||||| ||| |||||| |  ||| | |||||| |||||| ||||| ||  ||||||||||||||||| |||||||| ||||||||| |||| |     
T  124136 tggaccactcttaaggttggtccaccatagatatttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggaccaaaatgt 124037  T
Q  301 cacttttattaattgtgggaccaaaatgaaaacatgaaatta 342  Q
       |||||||||||||||||||||||||||||| ||||||||    
T  124036 acgttttattaattgtgggaccaaaatgaaaacttgaaatta 123995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 232 - 342
Target Start/End: Original strand, 125213 - 125323
Alignment:
Q  232 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaa 331  Q
    ||||||| |||||| ||||| ||  |||||||||||||||||||||||||| ||||||||| |||| |    ||||||||||||||||||||||||||||    
T  125213 catttggggttaaacttaaccgttaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaa 125312  T
Q  332 acatgaaatta 342  Q
    |  ||||||||    
T  125313 atttgaaatta 125323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 168 - 355
Target Start/End: Original strand, 43488 - 43678
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacat---ttggagttaaagttaacagtcgggatttat 264  Q
    |||| ||||||| | || ||||||| |||| | ||||||||||| |||||||||| |  ||| ||||   |||| |||||| ||||| ||| ||| ||||    
T  43488 ggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggacttat 43587  T
Q  265 ttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||| |||||||||| ||||     ||||||||||| |||||||||||| ||||| | ||||||  | |||||||||    
T  43588 ttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaa 43678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 375
Target Start/End: Complemental strand, 18924 - 18805
Alignment:
Q  256 gggatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaa 355  Q
    |||||||||||||||||||||| |||| |||||||||||||||   | ||||||||| | |||||||||||||||||| | ||||||  ||| ||| |||    
T  18924 gggatttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaaggatcaa 18825  T
Q  356 acgatctaataagcctttta 375  Q
      |||| ||||| |||||||    
T  18824 tggatcaaataaacctttta 18805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 168 - 371
Target Start/End: Complemental strand, 127634 - 127430
Alignment:
Q  168 ggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc-gggatttattt 266  Q
    |||| ||||||| || | ||||||| |||| | ||||||||||| ||| ||| |  |  ||| |||||||  |||||||||||| ||| |||||||||||    
T  127634 ggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacatttgaggttaaagttaactgtcagggatttattt 127535  T
Q  267 ggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaata 366  Q
    | |  ||||||| |||  |||||||| |||||   | |||||||| || ||||||||||| |||||| ||||||||| || ||||||||| || ||| ||    
T  127534 gaccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgacctatta 127435  T
Q  367 agcct 371  Q
    |||||    
T  127434 agcct 127430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 371
Target Start/End: Original strand, 128657 - 128710
Alignment:
Q  318 ggaccaaaatgaaaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    |||||||||||||||| | ||||||| |||||||||||| || ||| |||||||    
T  128657 ggaccaaaatgaaaacttaaaattaattaagggaccaaatgacctattaagcct 128710  T

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Target: scaffold2071 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 159 - 370
Target Start/End: Original strand, 587 - 799
Alignment:
Q  159 agatcgaatggttaaaattaacaaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtc-gg 257  Q
    ||||| || |||| ||||||| |||  ||||| |||||| | ||||||||||| ||| |||||| |||||| |||||||  |||||| || ||| || ||    
T  587 agatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatatacatttgaggttaaacttgacaatcagg 686  T
Q  258 gatttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaac 357  Q
    |||||||||| |  || |||  |||  |||||||| |||||   | |||||||| || ||||||||||||||||||  |||||||| ||  ||||||||     
T  687 gatttatttgaccgacagagacaaacttgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattagaggaccaaat 786  T
Q  358 gatctaataagcc 370  Q
    || ||| ||||||    
T  787 gacctattaagcc 799  T

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Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 83210 - 83299
Alignment:
Q  259 atttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataag 348  Q
    ||||||||||||||| | || ||| |||| |||||||||||  | |||||||||||||| ||||||||| ||| ||   |||||||||||    
T  83210 atttatttggcaaactgtgggaaaagtgaaggactaaaacgtgagttttattaattgtgagaccaaaataaaaccaaagaattaaataag 83299  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 356
Target Start/End: Complemental strand, 32758 - 32584
Alignment:
Q  181 aaaagtaatagggtctacgatggaccactctaaagattggtctattataaacatttggagttaaagttaacagtcgggatttatttggcaaacggaggaa 280  Q
    |||| ||||||| |||| ||||||||||||  ||| |||||| |  ||| ||||||   |||||||||||||||  |||||||||||||  | ||||  |    
T  32758 aaaaataataggatctatgatggaccactcctaaggttggtccaccatagacatttaaggttaaagttaacagttaggatttatttggccgatggagaca 32659  T
Q  281 aatgtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaataagggaccaaa 356  Q
    ||  || || || ||||| | | |||||||| || || ||||||||| ||||| ||||||||| || |||||||||    
T  32658 aacatg-ggcaccaaaacacgagttttattagttatgtgaccaaaataaaaacttgaaattaattacgggaccaaa 32584  T

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Target: scaffold1251 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 371
Target Start/End: Original strand, 1063 - 1204
Alignment:
Q  231 acatttggagttaaagttaacagtcggga-tttatttggcaaacggaggaaaatgtgagggactaaaacgccacttttattaattgtgggaccaaaatga 329  Q
    |||||||| |||||||||||||  |  || |||||||| |  |||||||  ||| |||||||| |||||   | |||||||| || ||||||||||||||    
T  1063 acatttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattacttatgggaccaaaatga 1162  T
Q  330 aaacatgaaattaaataagggaccaaacgatctaataagcct 371  Q
    ||||  |||||||  | |||||||||| || ||| |||||||    
T  1163 aaactggaaattatttgagggaccaaatgacctattaagcct 1204  T

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Target: scaffold0262 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 126
Target Start/End: Original strand, 4122 - 4209
Alignment:
Q  38 tcgctgggaaagaagaggagaaaagaaattaggacttttaatttagcattagggatattttaggtatttcacatctttaacattatttt 126  Q
    |||||||  ||||||| |||||||  |||| ||| |||||||||| ||||| || || |||||||||||||  |||| |||||||||||    
T  4122 tcgctggagaagaagaagagaaaattaatttgga-ttttaatttaacattaagggtactttaggtatttcatttcttcaacattatttt 4209  T

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