View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1248-INSERTION-2 (Length: 314)

Name: NF1248-INSERTION-2
Description: NF1248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1248-INSERTION-2
NF1248-INSERTION-2
[»] chr3 (46 HSPs)
chr3 (5-314)||(34280545-34280853)
chr3 (46-213)||(3537305-3537471)
chr3 (43-208)||(50534928-50535092)
chr3 (43-211)||(37673971-37674138)
chr3 (43-214)||(48908707-48908877)
chr3 (43-213)||(38639675-38639844)
chr3 (43-213)||(44400795-44400964)
chr3 (43-212)||(5939598-5939766)
chr3 (43-184)||(49183781-49183922)
chr3 (43-211)||(25753931-25754097)
chr3 (43-184)||(517477-517617)
chr3 (43-192)||(47359405-47359558)
chr3 (43-213)||(33944456-33944625)
chr3 (43-211)||(51686602-51686769)
chr3 (43-214)||(53664423-53664594)
chr3 (46-211)||(45570762-45570926)
chr3 (43-213)||(50948302-50948471)
chr3 (129-213)||(16883891-16883974)
chr3 (129-213)||(53888667-53888751)
chr3 (129-215)||(34729153-34729238)
chr3 (129-211)||(54126441-54126523)
chr3 (134-215)||(35989269-35989350)
chr3 (129-214)||(40118716-40118800)
chr3 (43-108)||(29623332-29623397)
chr3 (129-214)||(52620650-52620735)
chr3 (44-108)||(4247214-4247278)
chr3 (149-217)||(41099549-41099617)
chr3 (43-110)||(2420755-2420822)
chr3 (44-107)||(13638523-13638586)
chr3 (152-211)||(30121340-30121399)
chr3 (131-213)||(21777456-21777536)
chr3 (42-108)||(27681898-27681964)
chr3 (43-109)||(30131805-30131871)
chr3 (149-207)||(36598443-36598501)
chr3 (43-109)||(41961896-41961962)
chr3 (43-109)||(43007441-43007507)
chr3 (43-88)||(16883441-16883486)
chr3 (43-108)||(23163619-23163684)
chr3 (172-213)||(35283311-35283352)
chr3 (152-213)||(47789262-47789323)
chr3 (43-108)||(49860932-49860997)
chr3 (43-107)||(18257629-18257693)
chr3 (61-117)||(30697485-30697541)
chr3 (140-212)||(33281540-33281612)
chr3 (167-211)||(42668261-42668305)
chr3 (186-218)||(46672415-46672447)
[»] chr7 (48 HSPs)
chr7 (43-211)||(38505162-38505329)
chr7 (43-212)||(4057963-4058131)
chr7 (43-175)||(13044243-13044375)
chr7 (81-213)||(33871776-33871907)
chr7 (43-213)||(16805383-16805552)
chr7 (43-213)||(42254064-42254233)
chr7 (43-211)||(35264709-35264877)
chr7 (43-195)||(2826082-2826232)
chr7 (43-213)||(32650207-32650376)
chr7 (43-197)||(4126057-4126211)
chr7 (44-211)||(23465818-23465984)
chr7 (51-216)||(42112771-42112936)
chr7 (43-109)||(15748868-15748934)
chr7 (46-120)||(45940318-45940392)
chr7 (43-119)||(17818382-17818458)
chr7 (129-211)||(6746400-6746481)
chr7 (43-211)||(30081068-30081236)
chr7 (54-107)||(10591825-10591878)
chr7 (43-108)||(19791763-19791828)
chr7 (42-212)||(22556522-22556690)
chr7 (43-120)||(43348147-43348224)
chr7 (152-216)||(34651866-34651930)
chr7 (43-107)||(34670281-34670345)
chr7 (42-100)||(9573112-9573170)
chr7 (43-108)||(4787923-4787988)
chr7 (51-108)||(41471542-41471599)
chr7 (43-108)||(42266927-42266992)
chr7 (154-214)||(34670526-34670586)
chr7 (45-109)||(38233655-38233719)
chr7 (43-107)||(38235890-38235954)
chr7 (129-213)||(41471624-41471708)
chr7 (45-109)||(43741793-43741857)
chr7 (43-109)||(5967972-5968038)
chr7 (51-117)||(24923305-24923371)
chr7 (43-109)||(41002170-41002236)
chr7 (43-109)||(42620271-42620337)
chr7 (43-108)||(38138027-38138092)
chr7 (147-184)||(38470844-38470881)
chr7 (169-214)||(38505501-38505546)
chr7 (43-108)||(42622447-42622512)
chr7 (43-108)||(43665089-43665154)
chr7 (152-209)||(47275821-47275878)
chr7 (173-213)||(30081236-30081276)
chr7 (167-211)||(33872219-33872263)
chr7 (175-215)||(36747164-36747204)
chr7 (43-107)||(36845362-36845426)
chr7 (44-108)||(45510439-45510503)
chr7 (45-109)||(47275921-47275985)
[»] chr5 (34 HSPs)
chr5 (43-211)||(14569866-14570035)
chr5 (43-209)||(10843130-10843295)
chr5 (46-211)||(39649670-39649834)
chr5 (43-214)||(5772545-5772715)
chr5 (43-212)||(35683290-35683458)
chr5 (43-211)||(38568197-38568362)
chr5 (54-207)||(13569469-13569621)
chr5 (45-120)||(18675631-18675706)
chr5 (43-108)||(8944141-8944206)
chr5 (139-211)||(18671139-18671209)
chr5 (46-211)||(10955507-10955672)
chr5 (43-108)||(15974436-15974500)
chr5 (44-213)||(19389649-19389812)
chr5 (44-213)||(9684607-9684775)
chr5 (46-175)||(10438075-10438203)
chr5 (130-211)||(32824831-32824913)
chr5 (43-109)||(33718277-33718343)
chr5 (43-109)||(39027835-39027901)
chr5 (152-213)||(10295690-10295751)
chr5 (169-214)||(18670902-18670947)
chr5 (43-108)||(27480092-27480157)
chr5 (43-108)||(41923254-41923319)
chr5 (135-198)||(39027927-39027990)
chr5 (129-208)||(43496717-43496796)
chr5 (148-213)||(8944257-8944327)
chr5 (167-213)||(35708611-35708657)
chr5 (43-108)||(4648907-4648972)
chr5 (43-104)||(6491280-6491341)
chr5 (43-108)||(29022715-29022780)
chr5 (43-108)||(35704708-35704773)
chr5 (43-108)||(43496802-43496866)
chr5 (85-117)||(26149741-26149773)
chr5 (45-109)||(35868928-35868992)
chr5 (45-109)||(38302277-38302341)
[»] chr8 (29 HSPs)
chr8 (43-211)||(29584270-29584437)
chr8 (43-210)||(79439-79608)
chr8 (43-211)||(34336126-34336293)
chr8 (43-213)||(12506012-12506181)
chr8 (43-208)||(36837319-36837483)
chr8 (43-210)||(23932367-23932533)
chr8 (50-213)||(6943281-6943444)
chr8 (43-180)||(21173707-21173843)
chr8 (48-174)||(13369772-13369900)
chr8 (129-207)||(41865458-41865535)
chr8 (43-211)||(13227806-13227978)
chr8 (42-109)||(14641489-14641557)
chr8 (43-175)||(26772507-26772637)
chr8 (129-184)||(43239907-43239962)
chr8 (45-207)||(14581582-14581741)
chr8 (43-105)||(41866050-41866112)
chr8 (43-213)||(1839636-1839805)
chr8 (169-218)||(23932724-23932773)
chr8 (178-214)||(11226217-11226253)
chr8 (43-146)||(39194027-39194130)
chr8 (43-109)||(3404493-3404559)
chr8 (43-109)||(33230966-33231032)
chr8 (43-109)||(34349811-34349877)
chr8 (43-109)||(36102809-36102875)
chr8 (46-100)||(43239768-43239822)
chr8 (43-108)||(27085444-27085509)
chr8 (165-213)||(10604947-10604995)
chr8 (45-109)||(37659450-37659514)
chr8 (44-108)||(40984994-40985058)
[»] chr4 (48 HSPs)
chr4 (43-211)||(38136652-38136819)
chr4 (43-211)||(29114061-29114228)
chr4 (43-216)||(49667929-49668099)
chr4 (43-211)||(30198589-30198756)
chr4 (51-213)||(33500624-33500786)
chr4 (43-213)||(12708650-12708819)
chr4 (134-213)||(22165582-22165661)
chr4 (43-213)||(16318713-16318883)
chr4 (43-170)||(16423009-16423135)
chr4 (43-214)||(41708933-41709103)
chr4 (43-120)||(28175372-28175449)
chr4 (130-209)||(16461547-16461627)
chr4 (130-211)||(35959349-35959430)
chr4 (43-108)||(368153-368218)
chr4 (54-207)||(50494476-50494628)
chr4 (142-213)||(51151883-51151954)
chr4 (162-213)||(48620494-48620545)
chr4 (129-208)||(50784179-50784258)
chr4 (43-117)||(7182102-7182176)
chr4 (43-109)||(32648923-32648989)
chr4 (129-211)||(42650813-42650895)
chr4 (44-196)||(46176772-46176921)
chr4 (46-107)||(38366126-38366187)
chr4 (43-108)||(49936598-49936663)
chr4 (166-211)||(55510122-55510167)
chr4 (52-108)||(45823650-45823706)
chr4 (46-109)||(904296-904359)
chr4 (161-220)||(41844648-41844707)
chr4 (43-109)||(21730246-21730312)
chr4 (169-211)||(22845377-22845419)
chr4 (152-214)||(31530227-31530289)
chr4 (43-109)||(38317147-38317213)
chr4 (43-109)||(48830733-48830799)
chr4 (46-108)||(55509976-55510038)
chr4 (172-209)||(368290-368327)
chr4 (152-213)||(3126828-3126889)
chr4 (43-108)||(17873292-17873357)
chr4 (156-213)||(20534135-20534192)
chr4 (175-208)||(30863044-30863077)
chr4 (43-108)||(46669865-46669930)
chr4 (43-107)||(24291481-24291545)
chr4 (44-108)||(24662667-24662731)
chr4 (163-215)||(31418774-31418826)
chr4 (43-107)||(35959277-35959341)
chr4 (172-208)||(44076473-44076509)
chr4 (43-107)||(47669906-47669970)
chr4 (44-108)||(53013684-53013748)
chr4 (52-108)||(54091534-54091590)
[»] chr2 (49 HSPs)
chr2 (43-213)||(43572360-43572529)
chr2 (43-217)||(1364919-1365092)
chr2 (43-213)||(39205113-39205282)
chr2 (51-213)||(13018294-13018455)
chr2 (43-213)||(37194363-37194532)
chr2 (45-216)||(41099928-41100098)
chr2 (72-213)||(31082926-31083063)
chr2 (43-218)||(21626221-21626395)
chr2 (43-209)||(40212099-40212264)
chr2 (43-211)||(11515140-11515307)
chr2 (43-200)||(1270531-1270688)
chr2 (46-207)||(15234694-15234855)
chr2 (84-211)||(7367714-7367841)
chr2 (43-206)||(35549982-35550143)
chr2 (51-180)||(16813727-16813854)
chr2 (51-180)||(16853006-16853133)
chr2 (43-211)||(26905900-26906073)
chr2 (43-178)||(34757702-34757836)
chr2 (46-176)||(18590137-18590266)
chr2 (129-211)||(15803353-15803435)
chr2 (43-217)||(16518902-16519074)
chr2 (43-104)||(43100492-43100553)
chr2 (90-198)||(21835050-21835158)
chr2 (43-183)||(28539273-28539411)
chr2 (129-209)||(30072265-30072345)
chr2 (152-211)||(41655225-41655284)
chr2 (152-213)||(36567094-36567155)
chr2 (45-108)||(726046-726109)
chr2 (43-109)||(4042060-4042126)
chr2 (43-109)||(13765858-13765924)
chr2 (43-109)||(38023366-38023432)
chr2 (43-109)||(38293984-38294050)
chr2 (43-109)||(40357553-40357619)
chr2 (130-211)||(43190378-43190459)
chr2 (167-213)||(44137296-44137342)
chr2 (170-211)||(16625632-16625673)
chr2 (43-108)||(16625724-16625789)
chr2 (43-108)||(29880860-29880925)
chr2 (43-108)||(32243571-32243636)
chr2 (51-108)||(36030897-36030954)
chr2 (43-108)||(36567198-36567263)
chr2 (129-209)||(36870418-36870499)
chr2 (43-108)||(44020435-44020500)
chr2 (53-109)||(7184227-7184283)
chr2 (169-213)||(11514914-11514958)
chr2 (44-108)||(14385177-14385241)
chr2 (129-213)||(31584583-31584667)
chr2 (43-107)||(39750238-39750301)
chr2 (188-216)||(40211871-40211899)
[»] chr1 (48 HSPs)
chr1 (43-213)||(37649432-37649601)
chr1 (43-211)||(36886965-36887132)
chr1 (46-216)||(52067960-52068129)
chr1 (43-211)||(34154156-34154323)
chr1 (43-207)||(50226126-50226290)
chr1 (43-213)||(17760301-17760470)
chr1 (54-211)||(2909224-2909380)
chr1 (45-209)||(69829-69992)
chr1 (129-212)||(14439751-14439834)
chr1 (129-211)||(24369081-24369163)
chr1 (61-213)||(666390-666542)
chr1 (43-180)||(5584601-5584737)
chr1 (43-180)||(41817148-41817284)
chr1 (43-207)||(46001662-46001825)
chr1 (54-211)||(4204597-4204754)
chr1 (129-208)||(38795233-38795312)
chr1 (43-181)||(33324719-33324857)
chr1 (51-120)||(27255303-27255372)
chr1 (44-108)||(28848719-28848783)
chr1 (129-209)||(37875572-37875652)
chr1 (43-109)||(39886843-39886909)
chr1 (130-211)||(43036141-43036222)
chr1 (131-211)||(50587216-50587295)
chr1 (43-175)||(29092182-29092310)
chr1 (46-104)||(32287679-32287737)
chr1 (129-211)||(49102793-49102875)
chr1 (46-120)||(50247695-50247769)
chr1 (43-109)||(50402837-50402903)
chr1 (43-108)||(32672689-32672754)
chr1 (178-214)||(47742775-47742811)
chr1 (175-211)||(51302993-51303029)
chr1 (129-215)||(7915741-7915827)
chr1 (43-109)||(11017697-11017763)
chr1 (43-109)||(23871382-23871448)
chr1 (43-109)||(33991637-33991703)
chr1 (43-109)||(42161972-42162038)
chr1 (43-109)||(45565226-45565292)
chr1 (43-108)||(1278565-1278630)
chr1 (152-213)||(33991746-33991807)
chr1 (169-214)||(36886739-36886784)
chr1 (168-213)||(40136435-40136480)
chr1 (43-120)||(43530206-43530283)
chr1 (152-213)||(43571785-43571846)
chr1 (129-210)||(52073249-52073330)
chr1 (46-106)||(1688139-1688199)
chr1 (44-108)||(26345722-26345786)
chr1 (175-211)||(39508995-39509031)
chr1 (136-196)||(39886767-39886827)
[»] scaffold0388 (1 HSPs)
scaffold0388 (46-211)||(7170-7334)
[»] chr6 (24 HSPs)
chr6 (43-211)||(32719117-32719284)
chr6 (43-209)||(20820354-20820525)
chr6 (43-213)||(12779609-12779778)
chr6 (43-120)||(6687856-6687933)
chr6 (45-197)||(24849381-24849533)
chr6 (51-211)||(11179946-11180105)
chr6 (43-120)||(26289647-26289724)
chr6 (45-183)||(33590176-33590312)
chr6 (129-213)||(28551723-28551805)
chr6 (43-175)||(6855747-6855878)
chr6 (43-109)||(1567377-1567443)
chr6 (43-213)||(33755135-33755299)
chr6 (43-108)||(19477352-19477417)
chr6 (43-107)||(22788441-22788505)
chr6 (43-108)||(26713949-26714014)
chr6 (44-120)||(29054664-29054740)
chr6 (43-105)||(1029389-1029451)
chr6 (43-109)||(5825428-5825494)
chr6 (43-109)||(24734976-24735042)
chr6 (43-109)||(26481050-26481116)
chr6 (43-109)||(34914723-34914789)
chr6 (43-108)||(4465022-4465087)
chr6 (43-108)||(26574315-26574380)
chr6 (43-103)||(597060-597120)
[»] scaffold0119 (2 HSPs)
scaffold0119 (43-203)||(37217-37377)
scaffold0119 (43-200)||(30549-30706)
[»] scaffold0263 (1 HSPs)
scaffold0263 (130-215)||(5799-5884)
[»] scaffold0128 (1 HSPs)
scaffold0128 (43-211)||(26476-26644)
[»] scaffold0248 (1 HSPs)
scaffold0248 (43-213)||(12-181)
[»] scaffold0031 (1 HSPs)
scaffold0031 (43-173)||(93362-93491)
[»] scaffold0179 (1 HSPs)
scaffold0179 (43-211)||(939-1107)
[»] scaffold0136 (1 HSPs)
scaffold0136 (43-213)||(1839-2008)
[»] scaffold0051 (2 HSPs)
scaffold0051 (43-211)||(509-676)
scaffold0051 (43-211)||(3386-3553)
[»] scaffold0991 (1 HSPs)
scaffold0991 (133-214)||(491-573)
[»] scaffold0024 (1 HSPs)
scaffold0024 (61-181)||(44825-44944)
[»] scaffold0717 (2 HSPs)
scaffold0717 (43-108)||(1674-1739)
scaffold0717 (152-213)||(1783-1844)
[»] scaffold0002 (1 HSPs)
scaffold0002 (43-108)||(90805-90870)
[»] scaffold0140 (2 HSPs)
scaffold0140 (129-212)||(19291-19375)
scaffold0140 (181-215)||(19571-19605)
[»] scaffold0952 (1 HSPs)
scaffold0952 (43-109)||(3589-3655)
[»] scaffold0028 (2 HSPs)
scaffold0028 (43-109)||(35374-35440)
scaffold0028 (152-213)||(35271-35332)
[»] scaffold1562 (1 HSPs)
scaffold1562 (43-108)||(236-301)
[»] scaffold1158 (1 HSPs)
scaffold1158 (43-108)||(2292-2357)
[»] scaffold0636 (1 HSPs)
scaffold0636 (43-108)||(8487-8552)
[»] scaffold0245 (1 HSPs)
scaffold0245 (43-108)||(4242-4307)
[»] scaffold0229 (1 HSPs)
scaffold0229 (43-108)||(4573-4638)
[»] scaffold0006 (1 HSPs)
scaffold0006 (172-213)||(59670-59711)
[»] scaffold1163 (1 HSPs)
scaffold1163 (166-210)||(1931-1975)


Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 5 - 314
Target Start/End: Original strand, 34280545 - 34280853
Alignment:
Q  5 acaaagtgttggacggtaaatgaggatgttgctttggatgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa 104  Q
    |||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  34280545 acaaagtgttggacagtaaacgaggatattgctttggatgttatattatttttaagattaaaaatacagtaatcacatgcattaatttatcattatctaa 34280644  T
Q  105 aaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaac 204  Q
    ||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34280645 aaaaccaatcttttaattttttt-gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaac 34280743  T
Q  205 aaagcctaaaagttatctttaaaaattatgatagtttgatccttatttgagattcttaaggaccaaattgatattttttacatttttcaggaaccaaaca 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34280744 aaagcctaaaagttatctttaaaaattatgatagtttgatccttatttgagattcttaaggaccaaattgatattttttacatttttcaggaaccaaaca 34280843  T
Q  305 ggtctctgta 314  Q
    ||||||||||    
T  34280844 ggtctctgta 34280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 3537305 - 3537471
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        ||||||||||| |||||    
T  3537305 tataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaaaaattt-gaaagatttcttcattt 3537403  T
Q  146 tccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||    
T  3537404 tccctcatattttccacccctcaaagccttcccctcccttcccctccaaactcccaaacaaagcctaa 3537471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 50535092 - 50534928
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||| |||||||||| | || |||||        ||||||||||||||    
T  50535092 tgttatattatttttaaaattaaaaatatagtaatcatatgcattagtttatcattttctaaaaaactactcatttaaatttttt-gaaagatttctcca 50534994  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaag 208  Q
    ||||||||||||||||||||| |||||||| |||  |||||| ||||||||||||| |||||||||    
T  50534993 ttttccctcatattttccaccactcaaagcattctgttcccctcccctccaaactcgcaaacaaag 50534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 37674138 - 37673971
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||||| ||||||||        |||||||||||| |    
T  37674138 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaaattatcattctctaaaaaaccactcttttaa-attttttgaaagatttctcta 37674040  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||||| |||| |||||||    
T  37674039 tttttcctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaagaaagcct 37673971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 48908877 - 48908707
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| | ||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  48908877 tgttataatgtttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaatttttt-gaaagatttctcta 48908779  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||| ||||||||| | |||||||||||||||| |||| ||  ||||||||||||| |||||||||||||||    
T  48908778 tttttcctcatattctgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaaa 48908707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 38639675 - 38639844
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  38639675 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 38639773  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||| ||||||| |||||||||||||||| | || ||  |||||||| |||| ||||||||||||||    
T  38639774 tttttccttatattttgcacccctcaaagcctttcttttccttcccctccagactcccaaacaaagcctaa 38639844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 44400795 - 44400964
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||| | |||||||| ||||||||  ||||| ||||||||||||| | ||||||||        |||||||||||| |    
T  44400795 tgttataatatttttaaaattaaaaagaaagtaatcatatgcattaaattatcgttctctaaaaaactactcttttaaatttttt-gaaagatttctcta 44400893  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  44400894 tttttcctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 44400964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 5939766 - 5939598
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||| | ||||||||        |||||||||||| |    
T  5939766 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaaattatcattctctaaaaaactactcttttaa-aaaatttgaaagatttctcta 5939668  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    | || ||| ||||||| |||||||||||||||| |||| ||  ||||||||||||| |||||||||||||    
T  5939667 tatttccttatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagccta 5939598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 43 - 184
Target Start/End: Original strand, 49183781 - 49183922
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| || ||||||| |||||||| |||||||| |||||||||||||| ||| | | ||||||||        ||||||||||||||    
T  49183781 tgttatattatttttaaaataaaaaatatagtaatcatatgcattaatttatcattctctataaagctactcttttaaatttttt-gaaagatttctcca 49183879  T
Q  143 ttttccctcatattttcca-cccctcaaagccttcccttcccc 184  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  49183880 ttttccctcatattttccaccccctcaaagcctttccttcccc 49183922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 25754097 - 25753931
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| ||||||||||| |||||||| | ||||||||        |||||||||||| |    
T  25754097 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctttaaaaaactactcttttaa-tttttttgaaagatttctcta 25753999  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| ||||||||||| ||||||||||||| || ||||  |  ||||||||||||| ||||||||||||    
T  25753998 tttttcctcatattttacacccctcaaagcatttcctt-tcatcccctccaaactcccaaacaaagcct 25753931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 184
Target Start/End: Complemental strand, 517617 - 517477
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||| ||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  517617 tgttataatatatttaaaattaaaaatatagtaatcaaatgcattaatttatcattctctaaaaaactactcttttaa-aaattttgaaagatttctcaa 517519  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttcccc 184  Q
    |||||||| |||||||||||||  | ||||||||||||||||    
T  517518 ttttccctaatattttccaccctcccaagccttcccttcccc 517477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 47359405 - 47359558
Alignment:
Q  43 tgttatattattttt-aagattaaaaatacagtaatcacatgcattagtttat--cattctctaaaaaa--ccaatcttttaannnnnnnngaaagattt 137  Q
    ||||||||||||||| || |||||||||| | |||||| |||||||| |||||  ||||||||||||||  | | ||||||||        |||||||||    
T  47359405 tgttatattattttttaaaattaaaaatatattaatcatatgcattaatttatatcattctctaaaaaaaactactcttttaaatttttt-gaaagattt 47359503  T
Q  138 ctccattttccctcatattttccacccctcaaagccttcccttccccacccctcc 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47359504 ctccattttccctcatattttccacccctcaaagccttcccttcccttcccctcc 47359558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 33944625 - 33944456
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| | ||||||| |||||||| | |||||||| |||||||| ||||| ||||||||| |||| | ||||||||         ||||||||||| |    
T  33944625 tgttataatgtttttaaaattaaaaaaaaagtaatcatatgcattaatttattattctctaacaaactactcttttaaatttttta-aaagatttctcta 33944527  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| |||| ||   |||||||||||| ||||||||||||||    
T  33944526 tttttcctcatattttgcacccctcaaagcctttcctttcctttccctccaaactcccaaacaaagcctaa 33944456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 51686602 - 51686769
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||| ||||||| || ||||||| |||||||| |||||||| |||||||||||||||||||  |  |||| ||         |||||||||| ||    
T  51686602 tgttatattgtttttaaaataaaaaatatagtaatcatatgcattaatttatcattctctaaaaaagtacactttcaaaaaattta-aaagatttcttca 51686700  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||| |||||||||||| |||||||||| | ||| ||  |||||||||||| ||||||||||||    
T  51686701 ttttccctcgtattttccacccttcaaagcctttcattcaccttccctccaaactcgcaaacaaagcct 51686769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 53664594 - 53664423
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctc-c 141  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | ||||||||||      
T  53664594 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aatttttgtaagatttctctt 53664496  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||| | ||||||||| || ||||||||  ||| |||| ||  ||||||||||||| |||||||||||||||    
T  53664495 atttttcttcatattttgcatccctcaaaatctttcctttccttcccctccaaactcgcaaacaaagcctaaa 53664423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 45570926 - 45570762
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||||||||||||| |||||||||| |||||||| |||||||| ||||| ||||||||||| || | |||| |||        ||||||| |||  ||||    
T  45570926 tatattatttttaaaattaaaaatatagtaatcatatgcattaatttattattctctaaaatactactcttataa-ataaattgaaagatctctttattt 45570828  T
Q  146 tccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    | ||||||||||||||||| ||||||||||  |||  || ||||||||||||  ||||| ||||||    
T  45570827 ttcctcatattttccacccttcaaagccttatcttttcctcccctccaaacttgcaaacgaagcct 45570762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 50948302 - 50948471
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| || ||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  50948302 tgttataatatttttaaaattaaaaataaagcaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaagatttctcta 50948400  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| | ||||||||| |||| ||||||| ||| |||| ||   |||||||||||| |||| |||| ||||    
T  50948401 tttttcttcatattttgcaccactcaaagtctttcctttcctttccctccaaactcgcaaataaagtctaa 50948471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 16883891 - 16883974
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||||||| ||| ||||||||||| |||| ||||||||||||||| | ||| | |||||||  |||||||||||||    
T  16883891 gaaagatttctccatttcccc-catattttccatcccttaaagccttcccttccgctcccttgcaaactcgtaaacaaagcctaa 16883974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 53888667 - 53888751
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||||| ||||||||  |||||||   || | ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  53888667 gaaagatttctcaattttcccctatatttttgtccacccaaagcctttccttcccctcccctccaaactcccaaacaaagcctaa 53888751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 34729238 - 34729153
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    |||| |||||||||||||||||  ||||||||| ||| ||||||||||| |||  | | |||||||||||||||||||| |||||||    
T  34729238 gaaaaatttctccattttcccttgtattttccaaccc-caaagccttccattcttctctcctccaaactcacaaacaaatcctaaaa 34729153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 54126441 - 54126523
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||||||| |||||  |||||| ||||||| ||||||  |||||||||| ||||| ||| ||| ||||||||||||    
T  54126441 gaaagatttctccatgttcccctatatttcccaccccccaaagctctcccttcccctccccttcaatctcccaaacaaagcct 54126523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 35989269 - 35989350
Alignment:
Q  134 atttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    |||||||||||||| || ||||||| ||||||||||||  |||| |||||| ||| | |||| ||| |||||||||||||||    
T  35989269 atttctccattttctctaatatttttcacccctcaaagtattccattcccctccctttcaaattcataaacaaagcctaaaa 35989350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 40118800 - 40118716
Alignment:
Q  129 gaaagatttctccattttccctc-atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||||||||||||||| ||||| ||||||  |||||| ||||||| | ||||||||  |||||||||||| |||||||||||||||    
T  40118800 gaaagatttctccattt-ccctcgatatttctcacccc-caaagcccttccttcccctaccctccaaactctcaaacaaagcctaaa 40118716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 29623332 - 29623397
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||||||||| |  ||||| | |||||||||||||||| |||||||||    
T  29623332 tgttataatatttttaatattaaaaatatatgaatcataagcattagtttatcattttctaaaaaa 29623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Complemental strand, 52620735 - 52620650
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||||| |||||||||| |   ||||||  ||| || ||||||| |||| ||||| ||||||||||||| |||||||||||||||    
T  52620735 gaaagatatctccatttttctcaatatttcacactccccaaagccctcccctcccctcccctccaaactcccaaacaaagcctaaa 52620650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 4247214 - 4247278
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||||||||||    
T  4247214 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctctaaaaaa 4247278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 41099617 - 41099549
Alignment:
Q  149 ctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaagt 217  Q
    |||||||||||||||||||||||||||| | ||||  ||| || |||||| |||||||| ||| |||||    
T  41099617 ctcatattttccacccctcaaagccttctcatcccttcccatctaaactcccaaacaaaaccttaaagt 41099549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 2420755 - 2420822
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaacc 110  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||||    
T  2420755 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaacc 2420822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 13638523 - 13638586
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    |||||| |||| |||| |||||||||| | |||||| | |||||| ||||||||||||||||||    
T  13638523 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctctaaaaa 13638586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 30121399 - 30121340
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||| | ||||| ||||||| |||| ||||| ||||||||||||| ||||||||||||    
T  30121399 atatttccaaccccccaaagccctcccctcccctcccctccaaactcccaaacaaagcct 30121340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 21777536 - 21777456
Alignment:
Q  131 aagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||||||||||||  | ||||  |||||| ||||||| ||||| |||| ||||| ||||||| ||||||||||||||    
T  21777536 aagatttctccattttcccctagatttctcacccc-caaagccctccct-cccctccccttcaaactctcaaacaaagcctaa 21777456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 27681898 - 27681964
Alignment:
Q  42 atgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||||| |||| |||| |||||||||| | |||||| | |||||| ||||||| |||||||||||    
T  27681898 atgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctctaaaaaa 27681964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 30131871 - 30131805
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  30131871 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 30131805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 36598443 - 36598501
Alignment:
Q  149 ctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    ||||||||| | |||| |||||| |||| ||||||| ||||||||||||| ||||||||    
T  36598443 ctcatatttccaacccttcaaagtcttctcttcccctcccctccaaactcccaaacaaa 36598501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 41961962 - 41961896
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  41961962 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 41961896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 43007507 - 43007441
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  43007507 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 43007441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 16883441 - 16883486
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcatta 88  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||    
T  16883441 tgttatattatttttaaaataaaaaatatagtaatcatatgcatta 16883486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 23163619 - 23163684
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  23163619 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 23163684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 35283311 - 35283352
Alignment:
Q  172 ccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  35283311 cctttccttcccctcccctccaaactcccaaacaaagcctaa 35283352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 47789323 - 47789262
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| | ||||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  47789323 atatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 47789262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 49860932 - 49860997
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  49860932 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 49860997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 18257693 - 18257629
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| |||| |||| |||||||||| |  ||||| |  ||||||||||||||||||||||||    
T  18257693 tgttataatattcttaatattaaaaatatatgaatcataaacattagtttatcattctctaaaaa 18257629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 30697485 - 30697541
Alignment:
Q  61 attaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttt 117  Q
    |||||||||| | |||||| |  |||||||||||||||||||||||||  |||||||    
T  30697485 attaaaaatatattaatcataaacattagtttatcattctctaaaaaaataatcttt 30697541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 212
Target Start/End: Complemental strand, 33281612 - 33281540
Alignment:
Q  140 ccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    ||||||||||  |||||||| ||||  ||||| |||||||| ||  ||||||| ||||| |||||||||||||    
T  33281612 ccattttcccctatattttcaaccctccaaagtcttccctttccatcccctcctaactcccaaacaaagccta 33281540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 42668261 - 42668305
Alignment:
Q  167 caaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||| |||||||||  || |||||||||||||||||||||||    
T  42668261 caaagccctcccttcccttcctctccaaactcacaaacaaagcct 42668305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 218
Target Start/End: Original strand, 46672415 - 46672447
Alignment:
Q  186 cccctccaaactcacaaacaaagcctaaaagtt 218  Q
    |||||||||||||||||||||||| ||||||||    
T  46672415 cccctccaaactcacaaacaaagcgtaaaagtt 46672447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 4e-47; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 38505329 - 38505162
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| ||||||||  ||||||| |||||||||||||||||||| | ||||||||        ||||||||||||||    
T  38505329 tgttataatatttttaaaattaaaaatatagtaatcatctgcattaatttatcattctctaaaaaactactcttttaaaaaattt-gaaagatttctcca 38505231  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  38505230 ttttccctcaaattttccacccctcaaagccttcccttcccctcccctccaaactcccaaacaaagcct 38505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 4058131 - 4057963
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  4058131 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 4058033  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    |||| ||||||||||| |||||||||||| |||  ||| ||  ||||||||||||  |||||||||||||    
T  4058032 tttttcctcatattttgcacccctcaaagtcttttctttccttcccctccaaacttccaaacaaagccta 4057963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 13044243 - 13044375
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        ||| ||||||||||    
T  13044243 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactactcttttaattttttttgaaggatttctcca 13044342  T
Q  143 ttttccctcatattttccacccctcaaagcctt 175  Q
    ||||| |||||||||| |||||||| |||||||    
T  13044343 ttttctctcatatttttcacccctcgaagcctt 13044375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 33871907 - 33871776
Alignment:
Q  81 atgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttccacccctcaaagccttccctt 180  Q
    |||||||| ||||| |||||||||||||| | ||||||||         ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  33871907 atgcattaatttattattctctaaaaaactactcttttaaaaaattta-aaagatttctcaattttcccacatattttccacccctcaaagccttccctt 33871809  T
Q  181 ccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||||| ||||||||||||||    
T  33871808 cccctcccctccaaactcgcaaacaaagcctaa 33871776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 16805552 - 16805383
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||         ||| ||||||| |    
T  16805552 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaattttttta-aaaaatttctcta 16805454  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||| ||| | || ||  ||||||||||||| ||||||||||||||    
T  16805453 tttttcctcatattttgcacccctcaaagtctttcttttccttcccctccaaactcccaaacaaagcctaa 16805383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 42254064 - 42254233
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    |||||||  |||||||| |||||||||| |||||||| |||| ||| |||||||||||||||||||| | ||||||||         ||||||||||| |    
T  42254064 tgttataagatttttaaaattaaaaataaagtaatcatatgcgttaatttatcattctctaaaaaactactcttttaaatttttta-aaagatttctcta 42254162  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| | ||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  42254163 tttttcttcatattttacacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 42254233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 35264877 - 35264709
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaa-tcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||| ||||||||| |||||||||| ||||| |||||  ||||| ||||||||||| |||||||| | ||||||||        ||||||||||||     
T  35264877 tgttataatatttttaaaattaaaaatatagtaaatcacaaacattaatttatcattctttaaaaaactactcttttaattttttt-gaaagatttctct 35264779  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||| ||||||||||||||||||||||| || ||||| || ||||||||||||  ||||||||||||    
T  35264778 attttccttcatattttccacccctcaaagcatttccttcacctcccctccaaactatcaaacaaagcct 35264709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 195
Target Start/End: Complemental strand, 2826232 - 2826082
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| || ||||||| |||||||| ||||||||  ||||||||| | ||||| | | ||||||||        ||||||||||||||    
T  2826232 tgttatattatttttaaaatgaaaaatatagtaatcatatgcattaacttatcattcacgaaaaa-ctactcttttaaatttttt-gaaagatttctcca 2826135  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaa 195  Q
    ||||  |||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  2826134 ttttttctcatattttccacccttcaaagctttcccttcccctcccctccaaa 2826082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 32650376 - 32650207
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| | |||||| |||||||| |||||||||||||||||||| | ||||| ||        | ||||||| || |    
T  32650376 tgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctctaaaaaactactctttcaa-aaattttgtaagatttatcta 32650278  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| | ||||||||| |||||||||||| ||| |||| ||  ||||| ||||||| ||||||||||||||    
T  32650277 tttttcttcatattttgcacccctcaaagtctttcctttccttccccttcaaactcgcaaacaaagcctaa 32650207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 197
Target Start/End: Original strand, 4126057 - 4126211
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| | |||||| |||||||| ||||||||  |||||||||| | ||||||||         ||||||||||| |    
T  4126057 tgttatattatttttaaaattaaaaatataataatcatatgcattaatttatcatcatctaaaaaactactcttttaatttttttttaaagatttctcta 4126156  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaact 197  Q
    ||||| ||||| || |  ||||||||||| |||||||| ||  ||||||||||||    
T  4126157 ttttctctcatgttgtttacccctcaaagtcttccctttccatcccctccaaact 4126211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 211
Target Start/End: Complemental strand, 23465984 - 23465818
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccat 143  Q
    |||||| |||| |||| |||||| ||| | |||||| | | |||| |||||||||||||||||||| | ||||||||        |||||||||  ||||    
T  23465984 gttataatattcttaaaattaaatatatattaatcataagaattaatttatcattctctaaaaaactattcttttaaaaaatgt-gaaagattttaccat 23465886  T
Q  144 tttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||  |||||| | |||| |||||| |||||||||||| ||||||||||||| ||||||||||||    
T  23465885 tttcccctatatttccaacccttcaaagtcttcccttcccctcccctccaaactcccaaacaaagcct 23465818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 216
Target Start/End: Complemental strand, 42112936 - 42112771
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    |||| |||| |||||||||| |  ||||| | |||||||||||||||||||||||||| || ||||| ||        ||||||||||||||||| | ||    
T  42112936 tattcttaatattaaaaatatatgaatcataagcattagtttatcattctctaaaaaaacactctttcaaagaaatgtgaaagatttctccattt-ctct 42112838  T
Q  151 c-atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaag 216  Q
    | ||| || |||||||  ||| || | |||||||| ||||||||||||| |||||||||||||||||    
T  42112837 ctatacttcccaccccctaaaacccttccttcccctcccctccaaactcccaaacaaagcctaaaag 42112771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 15748934 - 15748868
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| |||||||||||||||    
T  15748934 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaac 15748868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 45940392 - 45940318
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||    
T  45940392 tataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactattcttttaa 45940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 17818382 - 17818458
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatctttta 119  Q
    ||||||| ||||||||| |||||||||| |||||| | || ||||| |||||||||||||||||||| | |||||||    
T  17818382 tgttatagtatttttaaaattaaaaatatagtaattatatacattaatttatcattctctaaaaaactattctttta 17818458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 6746481 - 6746400
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||||||||||||| ||||||||| ||||| |||| || ||| ||||||  |||| ||||||| ||||||||||||    
T  6746481 gaaagatttctccattttcccccatattttcgaccccccaaaaccctccattcccc-tcccttcaaactcccaaacaaagcct 6746400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 30081068 - 30081236
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| || ||||||  |||||||  |  ||||| |||| ||||||||||||||| | ||||||||        |||||||||||| |    
T  30081068 tgttataatatttttaaaataaaaaatgtagtaatcttaaacattaatttaccattctctaaaaaactactcttttaaaaaaatt-gaaagatttctcaa 30081166  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccc--cacccctccaaactcacaaacaaagcct 211  Q
    |||| |||||||||||||| |||| |||| |||||||||||  | |||||| |||||| |||| |||||||    
T  30081167 tttttcctcatattttcca-cccttaaagacttcccttcccctctcccctctaaactcccaaataaagcct 30081236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 10591878 - 10591825
Alignment:
Q  54 ttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    |||||| |||||||||| |||||||| |||||||| ||||||||||||||||||    
T  10591878 ttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaa 10591825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 19791763 - 19791828
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||||||||||||| |  ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  19791763 tgttatattatttttaaaacaaaaaatatagtaatcatatgcattaatttttcattctctaaaaaa 19791828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 212
Target Start/End: Complemental strand, 22556690 - 22556522
Alignment:
Q  42 atgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    |||||||| |||| |||| |||||||||| | |||||| | |||||||||||||| |||||||||||  | ||||||||        ||||||||||||     
T  22556690 atgttataatattcttaaaattaaaaatatattaatcataagcattagtttatcactctctaaaaaaatactcttttaa-aaaatgtgaaagatttctca 22556592  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    ||||| ||  ||| |||| | |||  | |||||| ||||| || |||||||||||| ||||||||||||||    
T  22556591 atttttccctata-tttctatccccgagagcctttccttctcctcccctccaaacttacaaacaaagccta 22556522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 43348224 - 43348147
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||| ||||||||| |||||||||| | |||||| |||||||| |||||  ||||||||||||| | ||||||||    
T  43348224 tgttataatatttttaaaattaaaaatataataatcatatgcattaatttattgttctctaaaaaactactcttttaa 43348147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 152 - 216
Target Start/End: Complemental strand, 34651930 - 34651866
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaag 216  Q
    |||||| | ||||||||||||| |||| ||||  ||||||||||||| |||||||||||||||||    
T  34651930 atatttccaacccctcaaagccatcccctcccttcccctccaaactcccaaacaaagcctaaaag 34651866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 34670281 - 34670345
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| ||||||||| || || |||| |||||||| |||||||| ||||||||||||||||||    
T  34670281 tgttataatatttttaaaataaagaatatagtaatcatatgcattactttatcattctctaaaaa 34670345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 100
Target Start/End: Complemental strand, 9573170 - 9573112
Alignment:
Q  42 atgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattct 100  Q
    |||||||  |||||||||||||||||||| | |||||| |||||||| |||||||||||    
T  9573170 atgttattatatttttaagattaaaaatataataatcatatgcattaatttatcattct 9573112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 4787988 - 4787923
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||||||||| | |||||| | |||||| ||||||| |||||||||||    
T  4787988 tgttataatatttttaaaattaaaaatatattaatcataagcattaatttatcactctctaaaaaa 4787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 41471542 - 41471599
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||||| |||||||||| | || ||| | ||||||||||||||||||||||||||    
T  41471542 tatttttaaaattaaaaatatattactcaaaagcattagtttatcattctctaaaaaa 41471599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 42266992 - 42266927
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| ||||| || | |||||| |||||||||||||||||||    
T  42266992 tgttataatattcttaaaattaaaaatatagtaaacataagcattaatttatcattctctaaaaaa 42266927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 34670526 - 34670586
Alignment:
Q  154 attttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||||||||||||||||  |||| ||||| | | ||||||||||| |||||||||||||||    
T  34670526 attttccacccctcaaaatcttctcttcctctctcctccaaactctcaaacaaagcctaaa 34670586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 38233719 - 38233655
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| ||||||||| |||||||||| |  ||||| |  ||||||||||||||||||||||||||    
T  38233719 ttataatatttttaatattaaaaatatatgaatcataaacattagtttatcattctctaaaaaac 38233655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 38235890 - 38235954
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| ||||||||| ||||||| || | |||||| | | |||||||||||||||||||||||    
T  38235890 tgttataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaa 38235954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 41471624 - 41471708
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||| ||||||||| |||  |||||| ||||||| ||||||| ||  ||||||  |||||||||||| |||||| |||||||    
T  41471624 gaaagatctctccatttccccctatatttcccaccccccaaagccctcaattccccttccctccaaactcccaaacagagcctaa 41471708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 43741793 - 43741857
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| ||||||||| |||||||||| | ||| || |||||||| ||||| ||||||||||||||    
T  43741793 ttataatatttttaaaattaaaaatataataaccatatgcattaatttattattctctaaaaaac 43741857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 5968038 - 5967972
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  5968038 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 5967972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 24923371 - 24923305
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttt 117  Q
    |||| |||| |||||||||| | |||||| |  ||||| |||||||||||||||||||||| |||||    
T  24923371 tattcttaaaattaaaaatatattaatcataatcattaatttatcattctctaaaaaaccactcttt 24923305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 41002236 - 41002170
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| |||||||||| | |||||| | | |||||||||||||| ||||||||||    
T  41002236 tgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattatctaaaaaac 41002170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42620337 - 42620271
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  42620337 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 42620271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 38138027 - 38138092
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||| | |||||||||  | |||||| | |||||| |||||||||||||||||||    
T  38138027 tgttataatatttttgaaattaaaaatgtattaatcataagcattaatttatcattctctaaaaaa 38138092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 38470881 - 38470844
Alignment:
Q  147 ccctcatattttccacccctcaaagccttcccttcccc 184  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  38470881 ccctcatattttccacccctcaaagtcttcctttcccc 38470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Original strand, 38505501 - 38505546
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||||||||| ||||  ||||||||||||| |||||||||||||||    
T  38505501 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaaa 38505546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 42622447 - 42622512
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||  ||| ||||||||||||  ||||| | |||||||||||||||||| |||||||    
T  42622447 tgttataatattcgtaatattaaaaatacatgaatcataagcattagtttatcattctttaaaaaa 42622512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 43665154 - 43665089
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | | | ||||||||||||||||||||||    
T  43665154 tgttataatattcttaaaattaaaaatatattaatcataagtagtagtttatcattctctaaaaaa 43665089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 47275878 - 47275821
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    |||||||| ||||| ||||||| || ||||||  ||||||||||||| ||||||||||    
T  47275878 atattttcaaccccccaaagccctcacttcccttcccctccaaactcccaaacaaagc 47275821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 30081276 - 30081236
Alignment:
Q  173 cttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  30081276 cttcccctcccttcccctccaaactcacaaacaaagcctaa 30081236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 33872219 - 33872263
Alignment:
Q  167 caaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||| |||| ||||| ||||||||||||| ||||||||||||    
T  33872219 caaagccctcccctcccctcccctccaaactcgcaaacaaagcct 33872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 36747204 - 36747164
Alignment:
Q  175 tcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    |||| ||||| ||||||||||||| ||||||||||||||||    
T  36747204 tcccctcccctcccctccaaactctcaaacaaagcctaaaa 36747164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 36845426 - 36845362
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| |||| |||| |||||||||| |||||||| | | |||| |||| |||||||||||||    
T  36845426 tgttataatattcttaaaattaaaaatatagtaatcataagtattaatttaacattctctaaaaa 36845362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 45510439 - 45510503
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| ||||||||| ||| |||||| | |||||| |  ||||| |||||||||||||||||||    
T  45510439 gttataatatttttaaaatttaaaatatattaatcataaacattaatttatcattctctaaaaaa 45510503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 47275985 - 47275921
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  47275985 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 47275921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 14570035 - 14569866
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||| ||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        ||||||||||||||    
T  14570035 tgttatattatttttaaaattaaatatatagtaatcatatgcattaatttatcattctctaaaaaacaactcttttaaatttttt-gaaagatttctcca 14569937  T
Q  143 ttttccctcatattttccacccctcaaagcc-ttcccttccccaccc-ctccaaactcacaaacaaagcct 211  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||    
T  14569936 ttttccctcatattttccacccctcaaagcctttccgttcccctcccgctccaaactcacaaacaaagcct 14569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 209
Target Start/End: Original strand, 10843130 - 10843295
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| | ||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  10843130 tgttataatgtttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 10843228  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    |||| ||||||||||| |||||||||||||||| |||  ||  ||||||||||||| ||||||||||    
T  10843229 tttttcctcatattttgcacccctcaaagcctttcctctccttcccctccaaactcccaaacaaagc 10843295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 39649670 - 39649834
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||| ||||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||| | | ||||||        |||||||||||| ||||    
T  39649670 tataatatttttaaaattaaaaataaagtaatcatatgcattaaattatcattctctaaaaaactact-ttttaaaattttttgaaagatttctctattt 39649768  T
Q  146 tccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    | ||||||||||| |||||||||||||||| |||| ||  ||||||||||||  ||||||||||||    
T  39649769 ttcctcatattttgcacccctcaaagccttacctttccttcccctccaaactaccaaacaaagcct 39649834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 5772715 - 5772545
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | ||| |||||| |    
T  5772715 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaaggtttctcta 5772617  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||| | ||||||||| |||||||||||| ||| |||| ||  ||||||||||||| |||||||||||||||    
T  5772616 tttttcttcatattttgcacccctcaaagtctttcctttccttcccctccaaactcgcaaacaaagcctaaa 5772545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 212
Target Start/End: Complemental strand, 35683458 - 35683290
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  35683458 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaagatttctcta 35683360  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    |||| | ||||||||| |||||||||||||||| | ||  |  ||||||||||||| |||||||||||||    
T  35683359 tttttcttcatattttgcacccctcaaagcctttcattttcttcccctccaaactcgcaaacaaagccta 35683290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 38568362 - 38568197
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||| ||||||| ||||||| || |||||| | |||||||| |||||| ||||||||||| | | ||||||||        ||||||||||| ||    
T  38568362 tgttatattgtttttaaaattaaaa-tatagtaatgatatgcattaatttatccttctctaaaaa-ctactcttttaaaaaaatt-gaaagatttcttca 38568266  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||||||||||||||||| ||||||||||  |||| || |||||||||| ||||||||||||    
T  38568265 ttttccctcatattttccacccctcgaagccttcccccccccccctctccaaactcgcaaacaaagcct 38568197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 54 - 207
Target Start/End: Original strand, 13569469 - 13569621
Alignment:
Q  54 ttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcat 153  Q
    |||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||| | ||||||||         ||||||||||| ||||| ||||||    
T  13569469 ttttaaaattaaaaataaagtaatcatatgcattaaattatcattctctaaaaaactactcttttaaaaaattta-aaagatttctctatttttcctcat 13569567  T
Q  154 attttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    ||||| ||||| |||||| ||| |||| ||  ||||||||||||| ||||||||    
T  13569568 attttgcacccatcaaagtctttcctttccttcccctccaaactcccaaacaaa 13569621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 18675706 - 18675631
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||||||||||| |||||||||| |||||| | |||||||| |||||||||||||||||||| | ||||||||    
T  18675706 ttatattatttttaaaattaaaaatatagtaattatatgcattaatttatcattctctaaaaaactactcttttaa 18675631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 8944141 - 8944206
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||||||||||| || |||||||||| |||||||| |||||||| |||||||||||||||||||    
T  8944141 tgttatattattttaaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaa 8944206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 211
Target Start/End: Original strand, 18671139 - 18671209
Alignment:
Q  139 tccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  18671139 tccattttccctcgtattttccacccttcaaagccttccctt-ccctcccctccaaactcac-aacaaagcct 18671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 10955672 - 10955507
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatc-attctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    |||| ||||||||| |||||||||| | ||| || ||| |||| |||||  |||||||||||||| | ||||||||        ||||||||||||||||    
T  10955672 tatactatttttaaaattaaaaatatattaaccatatgtattaatttatttattctctaaaaaactactcttttaaaattttt-gaaagatttctccatt 10955574  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    || ||||||||||| ||| ||||||||| || ||||| |  || |||||||||| |||| |||||||    
T  10955573 tttcctcatatttttcactcctcaaagcttttccttctcttcctctccaaactctcaaataaagcct 10955507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 15974436 - 15974500
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| ||||| |||||||||||||    
T  15974436 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttat-attctctaaaaaa 15974500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 19389812 - 19389649
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccat 143  Q
    |||||| ||||||||| |||||||||| | |||||| | |||||| |||||||||||||||||||  ||||||| ||        |||||||||  ||||    
T  19389812 gttataatatttttaaaattaaaaatatattaatcataagcattaatttatcattctctaaaaaattaatctttcaa-aaattgtgaaagattttaccat 19389714  T
Q  144 tttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| ||||||| | ||||  |||||     |||||||| ||||||||||||| ||||||||| ||||    
T  19389713 tttcccacatatttccaaccctccaaag-----ccttcccctcccctccaaactcccaaacaaagtctaa 19389649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 213
Target Start/End: Complemental strand, 9684775 - 9684607
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccat 143  Q
    |||||| |||| |||| |||||||||| | |||||| | |||||| ||||||||| |||||||||  | ||||| ||        ||| |||||  ||||    
T  9684775 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattttctaaaaaattactctttcaaaaaatgtggaa-gattttcccat 9684677  T
Q  144 tttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||  |||||| | ||||  | |||||||||||||||  ||||||||||||| ||||||||||||||    
T  9684676 tttcccctatatttccaaccctcctaagccttcccttcccttcccctccaaactcccaaacaaagcctaa 9684607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 10438075 - 10438203
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| |||||| |||| |||||||| | | | ||||         ||| ||||||| ||||    
T  10438075 tatactatttttaaaattaaaaatatagtaatcatatgcattaatttatctttctttaaaaaactactatgttaaaaaatttaaaaa-atttctctattt 10438173  T
Q  146 tccctcatattttccacccctcaaagcctt 175  Q
    | ||||||||||| ||||||||||||||||    
T  10438174 ttcctcatattttgcacccctcaaagcctt 10438203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 32824831 - 32824913
Alignment:
Q  130 aaagatttctccattttccctcatattttcc-acccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||| |||  ||||||||| | ||||||||||| |||||||||| |||||   ||||| ||||||||||||    
T  32824831 aaagatttctccatttccccctatattttcccatccctcaaagccctcccttcccctcccctgtgaactcccaaacaaagcct 32824913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 33718277 - 33718343
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| |||||||||| | |||||| | | |||||||||||||||||||||||||    
T  33718277 tgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctctaaaaaac 33718343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 39027835 - 39027901
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| |||||||| | ||| |||| ||| |||| ||||||||||||||||||||    
T  39027835 tgttataatatttttaaaattaaaaacaaagttatcatatgtattattttatcattctctaaaaaac 39027901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 10295690 - 10295751
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||| ||||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  10295690 atattttcaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 10295751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 18670947 - 18670902
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||||||||| ||||  |||||||||||||||||||||||||||||    
T  18670947 aagccttcccctcccttcccctccaaactcacaaacaaagcctaaa 18670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 27480157 - 27480092
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| ||| ||||||||||||||||||||||||    
T  27480157 tgttataatattcttaaaattaaaagtatattaatcatatgtattagtttatcattctctaaaaaa 27480092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 41923254 - 41923319
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||||||||||||||    ||||| |||||||||||||||||| |||| ||||    
T  41923254 tgttataatatttttaagattaaaaatatttgaatcatatgcattagtttatcattttctagaaaa 41923319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 39027927 - 39027990
Alignment:
Q  135 tttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactc 198  Q
    ||||| |||||| |||| |||||||||||||||||| | |||| || ||| |||||||||||||    
T  39027927 tttcttcatttttcctcctattttccacccctcaaaactttccatttccctcccctccaaactc 39027990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 43496796 - 43496717
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaag 208  Q
    |||||||||||| |||| ||| ||||||| ||| ||| |||| || || | ||||| ||||||||||||| |||||||||    
T  43496796 gaaagatttctctatttccccccatatttcccaacccccaaaaccctctcatcccctcccctccaaactcgcaaacaaag 43496717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 213
Target Start/End: Original strand, 8944257 - 8944327
Alignment:
Q  148 cctcatattttccacccctcaaagcc-----ttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||||||||||||||||     ||| | ||||| ||||||||||||| |||||||| |||||    
T  8944257 cctcatattttccacccctcaaagcctctcattcgcctcccctcccctccaaactcgcaaacaaaacctaa 8944327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 35708657 - 35708611
Alignment:
Q  167 caaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||| |||||||| ||||| ||||||| ||||||||||||||    
T  35708657 caaagcctttccttcccctccccttcaaactcccaaacaaagcctaa 35708611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 4648972 - 4648907
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  4648972 tgttatagtattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 4648907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 6491280 - 6491341
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa 104  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||||||    
T  6491280 tgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctctaa 6491341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 29022715 - 29022780
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||| ||||||| |||||| |  ||||| ||||||| |||||||||||    
T  29022715 tgttataatatttttaaaattacaaatacattaatcataaacattaatttatcactctctaaaaaa 29022780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 35704708 - 35704773
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||||| ||  ||||||||||| |||||| | ||| || |||||||||||||||||||    
T  35704708 tgttataatattttgaaagttaaaaatacattaatcataagcactaatttatcattctctaaaaaa 35704773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 43496866 - 43496802
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| || ||||||| |||||||| |  ||||| |||||||||||||||||||    
T  43496866 tgttataatatttttaaaataaaaaatatagtaatcataatcatta-tttatcattctctaaaaaa 43496802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 26149741 - 26149773
Alignment:
Q  85 attagtttatcattctctaaaaaaccaatcttt 117  Q
    ||||||||||||||||||||||||| |||||||    
T  26149741 attagtttatcattctctaaaaaactaatcttt 26149773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 35868928 - 35868992
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  35868928 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 35868992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 38302341 - 38302277
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  38302341 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 38302277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 29584270 - 29584437
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| |  |||||||        ||||||||||| ||    
T  29584270 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactacacttttaaaaaattt-gaaagatttcttca 29584368  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||    
T  29584369 ttttccctcgtattttccacccctcaaagcctttccttccccttccctccaaactcgcaaacaaagcct 29584437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 43 - 210
Target Start/End: Complemental strand, 79608 - 79439
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaacc--aatcttttaannnnnnnngaaagatttctc 140  Q
    |||| ||||||||| || |||||||||| |||||||| |||||||| ||||||||||||||||| ||   | ||||||||        ||||||||||||    
T  79608 tgttctattattttaaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaagactctactcttttaaaaaaaattgaaagatttctc 79509  T
Q  141 cattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcc 210  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||    
T  79508 cattttccctcatattttccactcctcaaagccttcccttcccctcccctccaaactcgcaaacaaagcc 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 34336126 - 34336293
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||  | ||||||||||||||| ||| |||||||||||||||| | |||||||         ||||||||||||||    
T  34336126 tgttatattatttttaaaattaaaaatttattaatcacatgcattaatttgtcattctctaaaaaactactctttta-caaaatttgaaagatttctcca 34336224  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| |||||||||||||||||||||||| ||||| ||| || ||||||||||||||||||||||||||    
T  34336225 tttttcctcatattttccacccctcaaagtcttccattctcctcccctccaaactcacaaacaaagcct 34336293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 12506181 - 12506012
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||| ||||| ||||||||||| || | ||||||||        ||||||||||||||    
T  12506181 tgttatattatttttaaaattaaaaatatagtcatcatatgcattaatttataattctctaaaatactactcttttaaatttttt-gaaagatttctcca 12506083  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||  || ||||||||||||||||||| ||||| ||||||| |||||||||| || ||||||||||||||    
T  12506082 ttttttcttatattttccacccctcaaaaccttctcttcccctcccctccaaattcgcaaacaaagcctaa 12506012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 208
Target Start/End: Complemental strand, 36837483 - 36837319
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||| ||||| | ||||||||        |||||||||||| |    
T  36837483 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctataaaactactcttttaa-attttttgaaagatttctcta 36837385  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaag 208  Q
    |||| ||||||||||| |||||||||||| ||| |||| ||  ||||||||||||| || ||||||    
T  36837384 tttttcctcatattttgcacccctcaaagtctttcctttccttcccctccaaactcccagacaaag 36837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 210
Target Start/End: Complemental strand, 23932533 - 23932367
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||| ||| |||||||||||||||||||| | ||||||||         ||||||||||| |    
T  23932533 tgttataatatttttaaaattaaaaataaagtaatcatatgcgttaatttatcattctctaaaaaactactcttttaaatttttta-aaagatttctcta 23932435  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcc 210  Q
    |||| | ||||||||| |||||||||||||||| |||| ||  |||||| |||||| |||||||||||    
T  23932434 tttttcttcatattttgcacccctcaaagcctttcctttccttcccctcaaaactcccaaacaaagcc 23932367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 213
Target Start/End: Complemental strand, 6943444 - 6943281
Alignment:
Q  50 ttatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccc 149  Q
    |||||||||| |||||||||| |||||||| |||||||| ||||||||||| ||||||| | |   ||| |        ||||||||| |||  ||||||    
T  6943444 ttatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctttaaaaaaactactattttaaattttttgaaagatttatccggtttccc 6943345  T
Q  150 tcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||| |||||||||||||  || ||| ||||||||||||| ||||||||| ||||    
T  6943344 tcatattttccacacctcaaagccttcaatttccctcccctccaaactctcaaacaaagtctaa 6943281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 21173843 - 21173707
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  21173843 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaagatttctcta 21173745  T
Q  143 ttttccctcatattttccacccctcaaagccttccctt 180  Q
    |||| | ||||||||| |||||||||||| ||| ||||    
T  21173744 tttttcttcatattttgcacccctcaaagtctttcctt 21173707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 174
Target Start/End: Complemental strand, 13369900 - 13369772
Alignment:
Q  48 tattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa---aaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    |||||||||||| |||||||||| |||||||  |||||||| |||||||||||||||   ||||  | ||||||||        |||||||||||| |||    
T  13369900 tattatttttaaaattaaaaatatagtaatcgtatgcattaatttatcattctctaaaaaaaaattactcttttaa-aaaatttgaaagatttctcaatt 13369802  T
Q  145 ttccctcatattttccacccctcaaagcct 174  Q
    ||| ||||||||||||||||||||||||||    
T  13369801 ttctctcatattttccacccctcaaagcct 13369772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 207
Target Start/End: Complemental strand, 41865535 - 41865458
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    ||||||||||| |||||||||||||||||| || |||||||||| |||  |||||| ||| ||||||||||||||||||    
T  41865535 gaaagatttcttcattttccctcatatttttca-ccctcaaagcattcatttcccctcccatccaaactcacaaacaaa 41865458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 13227806 - 13227978
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||  |||||||| || ||||| ||||| ||| ||||||||| |  |||| |||        ||||||||||| ||    
T  13227806 tgttataatatttttaaaattaaaaatgtagtaatcatatacattaatttataattatctaaaaaatctttcttataaatttttt-gaaagatttcttca 13227904  T
Q  143 ttttccctcatattttccacccctcaaagcct-----tcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||||||| | || ||| ||     |||| ||||| ||||||||||||| |||||| |||||    
T  13227905 ttttccctcatattttccactcatctaagtctttctctcccctcccctcccctccaaactctcaaacagagcct 13227978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 109
Target Start/End: Original strand, 14641489 - 14641557
Alignment:
Q  42 atgttatattatttttaagattaaaaa-tacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    |||||||||||||||||| |||||||| || || ||||| ||| |||| ||||||||||||||||||||    
T  14641489 atgttatattatttttaaaattaaaaaatatagcaatcatatgtattaatttatcattctctaaaaaac 14641557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 175
Target Start/End: Complemental strand, 26772637 - 26772507
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| | |||||| || ||||| |||||| ||||||||||||| | ||||||||        | |||||||||| |    
T  26772637 tgttataatatttttaaaattaaaaataaaataatca-atacattaatttatccttctctaaaaaactactcttttaa-aaaaattgtaagatttctcta 26772540  T
Q  143 ttttccctcatattttccacccctcaaagcctt 175  Q
    |||| ||| ||||||| ||||||||||| ||||    
T  26772539 tttttccttatattttacacccctcaaaacctt 26772507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 43239907 - 43239962
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttcccc 184  Q
    |||||||||||||||||||||||||||||| || || ||||| |||||| ||||||    
T  43239907 gaaagatttctccattttccctcatatttttcaaccttcaaaaccttccattcccc 43239962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 207
Target Start/End: Complemental strand, 14581741 - 14581582
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||||||||||||| |||||||||| |||||| | ||| ||||  |||| |||||||||||||| | | ||||||         ||| |||||||| ||    
T  14581741 ttatattatttttaaaattaaaaatatagtaattatatgtattaacttattattctctaaaaaactactattttaaaaaaata--aaatatttctcc-tt 14581645  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    || |||| |||||| || ||| |||| ||||| || |||| ||||||||||||| ||||||||    
T  14581644 tttcctcttatttttcatcccgcaaaaccttctctccccctcccctccaaactcgcaaacaaa 14581582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 41866112 - 41866050
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaa 105  Q
    ||||||||||||||||| |||||||||| || ||||| |||||||| ||||| ||||| ||||    
T  41866112 tgttatattatttttaaaattaaaaatatagcaatcatatgcattaatttattattctttaaa 41866050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 1839805 - 1839636
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||| ||| | |||| | ||| |||| ||||||| |||||||||||  | ||||| ||        |||||||||||| |    
T  1839805 tgttataatatttttaaaattaaacatatattaatgatatgtattaatttatcactctctaaaaaaatactctttcaaaaaatgt-gaaagatttctcaa 1839707  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||   ||| |||   |||| ||||||||| |||||||  ||||||||||||| ||||||||||||||    
T  1839706 ttttcctctataattttgtccccccaaagcctttccttcccttcccctccaaactcgcaaacaaagcctaa 1839636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 23932724 - 23932773
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcctaaaagtt 218  Q
    |||||||||||||||  ||||||||||||| ||||||||||||| |||||    
T  23932724 aagccttcccttcccttcccctccaaactcgcaaacaaagcctataagtt 23932773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 11226253 - 11226217
Alignment:
Q  178 cttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11226253 cttccccacccctccaaactcccaaacaaagcctaaa 11226217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 146
Target Start/End: Original strand, 39194027 - 39194130
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| |||| |||| |||||||||| |  ||||| |  ||||||||||||||||||||||||| || ||||| ||        ||||||||||||||    
T  39194027 tgttataatattcttaatattaaaaatatatgaatcataaacattagtttatcattctctaaaaaaacactctttcaaaaaagtgtgaaagatttctcca 39194126  T
Q  143 tttt 146  Q
    ||||    
T  39194127 tttt 39194130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 3404559 - 3404493
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  3404559 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 3404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 33231032 - 33230966
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  33231032 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 33230966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 34349811 - 34349877
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  34349811 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 34349877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 36102875 - 36102809
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  36102875 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 36102809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 43239768 - 43239822
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattct 100  Q
    |||| ||||||||| || ||||||| |||||||| |||||||| |||||||||||    
T  43239768 tataatatttttaaaataaaaaatatagtaatcatatgcattaatttatcattct 43239822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 27085444 - 27085509
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||| | |||||||||| | |||||| | |||||| ||||||| |||||||||||    
T  27085444 tgttataatattttttaaattaaaaatatattaatcataagcattaatttatcactctctaaaaaa 27085509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 10604995 - 10604947
Alignment:
Q  165 ctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||| |||| ||||||| || |||||||||| ||||||||||||||    
T  10604995 ctcaaagtcttctcttcccctcctctccaaactctcaaacaaagcctaa 10604947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 37659514 - 37659450
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  37659514 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 37659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 40985058 - 40984994
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| |||| |||| |||||||||| | |||||| |  ||||| |||||||||||||||||||    
T  40985058 gttatagtattattaaaattaaaaatatattaatcataaacattaatttatcattctctaaaaaa 40984994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 38136819 - 38136652
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  38136819 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaatttttt-gaaagatttctcta 38136721  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||| |||||||||||||||| |||||||  ||||||||||||| ||||||||||||    
T  38136720 ttttccctcatattttgcacccctcaaagcctttccttcccttcccctccaaactcccaaacaaagcct 38136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 29114228 - 29114061
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  29114228 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactattcttttaaatttttt-gaaagatttctcta 29114130  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||    
T  29114129 tttttcctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcct 29114061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 43 - 216
Target Start/End: Complemental strand, 49668099 - 49667929
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||| |||||||| | ||||||||        || | |||||||||    
T  49668099 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctttaaaaaactactcttttaaatttt---gacacatttctcca 49668003  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaag 216  Q
    ||||||||||||||||||| ||||||||  |||||||| |||  ||  ||||||||||||||||||||||||||    
T  49668002 ttttccctcatattttccatccctcaaaatcttccctttcccttcctgccaaactcacaaacaaagcctaaaag 49667929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 30198756 - 30198589
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  30198756 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 30198658  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  || |||||||||| ||||||||||||    
T  30198657 tttttcctcatattttgcacccctcaaagcctttcctttccttcctctccaaactcccaaacaaagcct 30198589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 51 - 213
Target Start/End: Original strand, 33500624 - 33500786
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        ||||| |||||| ||||| ||     
T  33500624 tatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaaaaaaattgaaaggtttctctatttttcca 33500723  T
Q  151 catattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  33500724 catattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 33500786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 12708819 - 12708650
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||| ||| | ||||||||        |||||||||||| |    
T  12708819 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaataactactcttttaa-attttttgaaagatttctcta 12708721  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| |||| ||   |||||||||||| ||||||||| ||||    
T  12708720 tttttcctcatattttgcacccctcaaagcctttcctttcctttccctccaaactcccaaacaaagtctaa 12708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 22165661 - 22165582
Alignment:
Q  134 atttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  22165661 atttctcaattttccctcatattttccacctctcaaagccttcccttcctctcccctccaaactcacaaacaaagcctaa 22165582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 16318713 - 16318883
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | | || |||        | |||||||||| |    
T  16318713 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactattctaa-gaaatttgtaagatttctcta 16318811  T
Q  143 ttttccctcatattttcca-cccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| | ||||||||| || |||||||||||||| |||| ||  || |||||||||||||||||||||||||    
T  16318812 tttttcttcatattttgcaccccctcaaagcctttcctttccttcctctccaaactcacaaacaaagcctaa 16318883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 16423009 - 16423135
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||  |||||||| || ||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  16423009 tgttatattatttttaaaattaaaaatgtagtaatcatatacattaatttatcattctctaaaaaactattcttttaa-tttttttgaaagatttctcta 16423107  T
Q  143 ttttccctcatattttccacccctcaaa 170  Q
    |||||||||||||||||| || ||||||    
T  16423108 ttttccctcatattttccgccgctcaaa 16423135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 214
Target Start/End: Complemental strand, 41709103 - 41708933
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| || ||||| |  || || |||||||||||| ||||||| | ||||| ||        ||||||||||||||    
T  41709103 tgttatattatttttaaaattaaaaatatagcaatcatacacactaatttatcattctccaaaaaactactctttgaattttttt-gaaagatttctcca 41709005  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    || | ||||||||||| ||  |||||||| ||||||||||||  |||||||||||| |||| ||||||||||    
T  41709004 ttctacctcatatttttcaatcctcaaagtcttcccttccccttccctccaaactcgcaaagaaagcctaaa 41708933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 28175449 - 28175372
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||    
T  28175449 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa 28175372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 16461627 - 16461547
Alignment:
Q  130 aaagatttctccattttccctcatattttccacccctcaaagccttc-ccttccccacccctccaaactcacaaacaaagc 209  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||| | |||||| || |||||||||| ||||||||||    
T  16461627 aaagatttctcaattttccctcatattttccacccctcaaagctttctctttcccctcctctccaaactcgcaaacaaagc 16461547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 35959349 - 35959430
Alignment:
Q  130 aaagatttctccattttccctc-atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||||    
T  35959349 aaagatttctcca-tttccctctatattttccaccccccaaagcctttcctacccctcccctccaaactcccaaacaaagcct 35959430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 368153 - 368218
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||    
T  368153 tgttataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaa 368218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 207
Target Start/End: Complemental strand, 50494628 - 50494476
Alignment:
Q  54 ttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcat 153  Q
    |||||| |||||||||| |||||||| |||||||| | |||||||||||||||||| |  |||||||        |||||| ||||| ||||||||||||    
T  50494628 ttttaaaattaaaaatatagtaatcatatgcattaatctatcattctctaaaaaactatccttttaa-attttttgaaagaattctctattttccctcat 50494530  T
Q  154 attttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    |||||  | || |||||| ||| |||||||  || |||||||||| ||||||||    
T  50494529 attttttatccttcaaagtctttccttcccttccgctccaaactcccaaacaaa 50494476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 213
Target Start/End: Complemental strand, 51151954 - 51151883
Alignment:
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||| ||| |||||||||||  ||||||||||| |||||||| |||||||||| || ||||||||||||||    
T  51151954 atttttccttatattttccacttctcaaagcctttccttcccctcccctccaaaatcgcaaacaaagcctaa 51151883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 48620494 - 48620545
Alignment:
Q  162 cccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  48620494 ccccccaaagcctttccttcccctcccctccaaactcgcaaacaaagcctaa 48620545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 50784258 - 50784179
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaag 208  Q
    ||||||||||| || |||| |||||||||| |||||||||||||  ||  || ||| ||||||||||||| |||||||||    
T  50784258 gaaagatttcttcaatttctctcatatttttcacccctcaaagcactcattttccctcccctccaaactcgcaaacaaag 50784179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 7182176 - 7182102
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttt 117  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||||| |||||    
T  7182176 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaaccattcttt 7182102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 32648989 - 32648923
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| |||||||||| | |||||| | | |||||||||||||||||||||||||    
T  32648989 tgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctctaaaaaac 32648923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 42650813 - 42650895
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||| || ||||| ||  ||||||  |||||| ||||||| | |||||||  ||||||||||||||||||||||||||    
T  42650813 gaaagatttatcaatttttccctatatttctcaccccccaaagcccttccttcccttcccctccaaactcacaaacaaagcct 42650895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 46176921 - 46176772
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccat 143  Q
    |||||| ||||||||| |||||||||| |  ||||| |  |||||||||||||||||||||||||  | ||||| ||          ||||||||||||     
T  46176921 gttataatatttttaatattaaaaatatatgaatcataaccattagtttatcattctctaaaaaaatactctttcaaaaaatgtg--aagatttctcca- 46176825  T
Q  144 tttccctc-atattttccacccctcaaagccttcccttccccacccctccaaac 196  Q
    ||||||||  ||||||||||||| ||||| |||||||||||| |||||||||||    
T  46176824 tttccctctttattttccacccc-caaagtcttcccttcccctcccctccaaac 46176772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 38366126 - 38366187
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    |||| ||||||||| |||||||||| | |||||| | | |||||||||||||||||||||||    
T  38366126 tataatatttttaaaattaaaaatatattaatcataagtattagtttatcattctctaaaaa 38366187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 49936598 - 49936663
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||||||||||    
T  49936598 tgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctctaaaaaa 49936663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 55510122 - 55510167
Alignment:
Q  166 tcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||    
T  55510122 tcaaagccttccattcccctcccctccaaactcccaaacaaagcct 55510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 45823650 - 45823706
Alignment:
Q  52 atttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||||| |||||| ||| |||||||  |||||||| |||||||||||||||||||    
T  45823650 atttttaaaattaaatatatagtaatcttatgcattaatttatcattctctaaaaaa 45823706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 109
Target Start/End: Original strand, 904296 - 904359
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    |||| ||||||||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  904296 tataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 904359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 41844648 - 41844707
Alignment:
Q  161 acccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaagttat 220  Q
    ||||| ||||| | |||| ||||  ||||||||||||| |||||||||||||||||||||    
T  41844648 accccccaaagtcctcccctcccttcccctccaaactcccaaacaaagcctaaaagttat 41844707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 21730312 - 21730246
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| || | |||||||||| | |||||| | | |||||||||||||||||||||||||    
T  21730312 tgttataatattcttgaaattaaaaatatattaatcataagtattagtttatcattctctaaaaaac 21730246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 22845377 - 22845419
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||| |||||||||||||||||||||||| |||||| |||||    
T  22845377 aagccctcccttccccacccctccaaactcccaaacagagcct 22845419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Original strand, 31530227 - 31530289
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||||||  ||||| ||||||| |||| ||||  ||||||||||||| |||||||||||||||    
T  31530227 atatttttaaccccccaaagccctcccctcccttcccctccaaactctcaaacaaagcctaaa 31530289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 38317213 - 38317147
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  38317213 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 38317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 48830799 - 48830733
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  48830799 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 48830733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 108
Target Start/End: Original strand, 55509976 - 55510038
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||| ||||||||| || ||||||| || ||||| || ||||| |||||||||||||||||||    
T  55509976 tataatatttttaaaataaaaaatatagcaatcatattcattaatttatcattctctaaaaaa 55510038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 368290 - 368327
Alignment:
Q  172 ccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  368290 ccttcccttcccctcccctccaaactcccaaacaaagc 368327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 3126889 - 3126828
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||| ||||| ||||||  |||||||||  ||||||||||||| |||||||| |||||    
T  3126889 atattttcaaccccccaaagctctcccttcccttcccctccaaactcccaaacaaaacctaa 3126828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 17873292 - 17873357
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  17873292 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 17873357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 20534135 - 20534192
Alignment:
Q  156 tttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| ||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  20534135 tttccaacccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 20534192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 208
Target Start/End: Original strand, 30863044 - 30863077
Alignment:
Q  175 tcccttccccacccctccaaactcacaaacaaag 208  Q
    |||||||||| |||||||||||||||||||||||    
T  30863044 tcccttcccctcccctccaaactcacaaacaaag 30863077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 46669930 - 46669865
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||| | |||||||||||||||||||    
T  46669930 tgttataatattcttaaaattaaaaatatattaatcataagcataaatttatcattctctaaaaaa 46669865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 24291481 - 24291545
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||    
T  24291481 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaa 24291545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 24662731 - 24662667
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| ||||||||| |||||||| | | |||||| | |||||  |||||||||||||||||||    
T  24662731 gttataatatttttaaaattaaaaaaatattaatcataagcattgatttatcattctctaaaaaa 24662667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 215
Target Start/End: Complemental strand, 31418826 - 31418774
Alignment:
Q  163 ccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    ||||||||| | | |||||| | ||||||||||||| ||||||||||||||||    
T  31418826 ccctcaaagtcattccttcctctcccctccaaactctcaaacaaagcctaaaa 31418774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 35959277 - 35959341
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| |||| |||| |||||||||| |  ||||| | |||||| ||||||||||||||||||    
T  35959277 tgttataatattcttaatattaaaaatatatgaatcataagcattactttatcattctctaaaaa 35959341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 44076509 - 44076473
Alignment:
Q  172 ccttcccttccccacccctccaaactcacaaacaaag 208  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  44076509 ccttcccttcccctcccctccaaactcgcaaacaaag 44076473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 47669906 - 47669970
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||    
T  47669906 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaa 47669970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 53013684 - 53013748
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| |||| |||| |||||||||| | |||||| |  ||||| |||||||||||||||||||    
T  53013684 gttataatattgttaaaattaaaaatatattaatcataaacattaatttatcattctctaaaaaa 53013748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 54091534 - 54091590
Alignment:
Q  52 atttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||||| |||||||||| | |||||| ||| |||| ||||||||||| |||||||    
T  54091534 atttttaaaattaaaaatatattaatcatatgaattaatttatcattctttaaaaaa 54091590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 43572529 - 43572360
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  43572529 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaatttttt-gaaagatttctcta 43572431  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  43572430 tttttcctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 43572360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 1364919 - 1365092
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  1364919 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaaaaaattt-gtaagatttctcta 1365017  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaagt 217  Q
    |||| | ||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||||||    
T  1365018 tttttcttcatattttgcacccctcaaagcctttcctttccttcccctccaaactcgcaaacaaagcctaaaagt 1365092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 39205113 - 39205282
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||| ||||||| |||||||||||| | ||||||||        ||||||||||| ||    
T  39205113 tgttatattatttttaaaattaaaaatatagtaatcatatacattaatttatcactctctaaaaaactactcttttaaatttttt-gaaagatttctaca 39205211  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||  |||||||||| ||||||||||||||||| ||||| ||||||| |||||  |||||||    
T  39205212 ttttccctcatacattccacccctaaaagccttcccttcccctccccttcaaactcgcaaacgcagcctaa 39205282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 13018455 - 13018294
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |||||  |     
T  13018455 tatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-aaaaattgaaagatttctctattttttca 13018357  T
Q  151 catattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  13018356 catattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 13018294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 37194363 - 37194532
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  37194363 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 37194461  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| | ||  |   |||||||||||| ||||||||||||||    
T  37194462 tttttcctcatattttgcacccctcaaagcctttcattttctttccctccaaactcccaaacaaagcctaa 37194532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 41100098 - 41099928
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||| ||||||||  || ||||||| ||||| || ||| | || |||||||||||||||||||||| ||||||||         |||||||||| ||||    
T  41100098 ttataatatttttagaatgaaaaatatagtaaccatatggagtaatttatcattctctaaaaaaccactcttttaaaattttta-aaagatttcttcatt 41100000  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaag 216  Q
    |||||||||||||| ||||||||||||||||||| ||||| | |||||||| || |||||||||||||||||    
T  41099999 ttccctcatatttttcacccctcaaagccttcccctcccctctcctccaaattcccaaacaaagcctaaaag 41099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 72 - 213
Target Start/End: Original strand, 31082926 - 31083063
Alignment:
Q  72 agtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttccacccctcaaag 171  Q
    |||||||| |||||||| |||||||||||||||||||||| || |||||        || |||||||||||||||||||||||||||||||   ||||||    
T  31082926 agtaatcatatgcattaatttatcattctctaaaaaaccactcatttaattttttt-gatagatttctccattttccctcatattttccac---tcaaag 31083021  T
Q  172 ccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  31083022 cctttccttcccctcccctccaaactcccaaacaaagcctaa 31083063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 218
Target Start/End: Original strand, 21626221 - 21626395
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| | |||||| |||||||| |||||||||||||||||| | | |||||||         |||| |||||||||    
T  21626221 tgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctctaaaaacctactctttta-gaaaatttgaaaaatttctcca 21626319  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaagtt 218  Q
    |||| ||||||||||| |||||||||||||||| | || ||  ||||| ||||||| |||||||||||||| ||||    
T  21626320 tttttcctcatattttgcacccctcaaagcctttcatttccttccccttcaaactcccaaacaaagcctaagagtt 21626395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 43 - 209
Target Start/End: Original strand, 40212099 - 40212264
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| || || ||| |||||||||| |||||||  |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  40212099 tgttataataattgtaaaattaaaaataaagtaatcgtatgcattaatttatcattctctaaaaaactactcttttaaaattttt-gaaagatttctcta 40212197  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    |||| ||||||||||| ||||||||||||||||  ||| ||  ||||||||||||| ||||||||||    
T  40212198 tttttcctcatattttgcacccctcaaagccttttctttccttcccctccaaactcccaaacaaagc 40212264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 11515140 - 11515307
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  11515140 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaagatttctcta 11515238  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| | ||||||||| ||| ||||||| |||| |||| ||  ||||||||||||| ||||||||||||    
T  11515239 tttttcttcatattttgcactcctcaaaacctttcctttccttcccctccaaactcgcaaacaaagcct 11515307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 200
Target Start/End: Complemental strand, 1270688 - 1270531
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa-aaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||||| ||||| | ||||||||         |||||||||||     
T  1270688 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaaactactcttttaaaaaattta-aaagatttctca 1270590  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcac 200  Q
    ||| |||||||||||||| | ||||||||| ||| | ||| || |||||||||||||||    
T  1270589 attctccctcatattttctatccctcaaagtctttcattctcctcccctccaaactcac 1270531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 207
Target Start/End: Complemental strand, 15234855 - 15234694
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagttt-atcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||| |||||||| |||||||||| |||||||| |||||||| ||| |||||||| |||||||| | | ||||||         ||| |||||||||||    
T  15234855 tatatcatttttaaaattaaaaatatagtaatcatatgcattaattttatcattctttaaaaaactactattttaaaaaaatttaaaa-atttctccatt 15234757  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||    
T  15234756 ttccctcgtattttccacccctcaaagtcttctcttcccctcccctccaaactcgcaatcaaa 15234694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 7367714 - 7367841
Alignment:
Q  84 cattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttccacccctcaaagccttcccttccc 183  Q
    ||||| ||||||||||||||||||| | ||  |||||        ||||||||||| |||||||||||||||||||||| ||  |||||||||||||||     
T  7367714 cattaatttatcattctctaaaaaaactattctttaaaaaaatgtgaaagatttcttcattttccctcatattttccactccctaaagccttcccttcca 7367813  T
Q  184 cacccctccaaactcacaaacaaagcct 211  Q
    | ||||||||||||| ||||||||||||    
T  7367814 ctcccctccaaactctcaaacaaagcct 7367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 206
Target Start/End: Complemental strand, 35550143 - 35549982
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| || ||||||| | | || | |||||||| |||||||||||||||||||| | ||||||||         |||||||| || |    
T  35550143 tgttatattatttttaaaataaaaaatataattatgatatgcattaatttatcattctctaaaaaactattcttttaaatttttta-aaagatttttcaa 35550045  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaa 206  Q
    ||  ||||||||||||||||||||||||||||| | |||||| ||||||||||||| |||||||    
T  35550044 tta-ccctcatattttccacccctcaaagcctttcattcccctcccctccaaactctcaaacaa 35549982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 16813727 - 16813854
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    ||||||||| |||||||||| |||||||| |||||||| ||||| |||||||||||||||| ||||||||         ||||||||||  |||||||||    
T  16813727 tatttttaaaattaaaaatatagtaatcatatgcattaatttat-attctctaaaaaaccactcttttaaatttttta-aaagatttctttattttccct 16813824  T
Q  151 catattttccacccctcaaagccttccctt 180  Q
    |||||||||||||| ||||||| |||||||    
T  16813825 catattttccacccttcaaagctttccctt 16813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 180
Target Start/End: Original strand, 16853006 - 16853133
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    ||||||||| |||||||||| |||||||| |||||||| ||||| |||||||||||||||| ||||||||         ||||||||||  |||||||||    
T  16853006 tatttttaaaattaaaaatatagtaatcatatgcattaatttat-attctctaaaaaaccactcttttaaatttttta-aaagatttctttattttccct 16853103  T
Q  151 catattttccacccctcaaagccttccctt 180  Q
    |||||||||||||| ||||||| |||||||    
T  16853104 catattttccacccttcaaagctttccctt 16853133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 26905900 - 26906073
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaa---tcttttaa--nnnnnnnngaaagattt 137  Q
    ||||||| ||||||||| |||||||||| |||||||| ||||||||  ||||||||||||||||||| ||   ||||||||          |||||||||    
T  26905900 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaaattatcattctctaaaaaactaatattcttttaaatttttttttgaaagattt 26905999  T
Q  138 ctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||| ||||| ||||||||||| ||||||||||||| || |||| ||  ||| ||||||||| |||| |||||||    
T  26906000 ctctatttttcctcatattttgcacccctcaaagcttttcctttccttcccatccaaactcccaaagaaagcct 26906073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 34757702 - 34757836
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||| | |||||||||| | |||||| || ||||| ||||||||||||||| |||  | |||||| |        |||||||||||| |    
T  34757702 tgttatattattttttaaattaaaaatataataatcatatacattaatttatcattctctaagaaattactcttttcaaattttt-gaaagatttctcaa 34757800  T
Q  143 ttttccctcatattttccacccctcaaagccttccc 178  Q
    ||||| |||||||||||||||||||||| |||||||    
T  34757801 ttttctctcatattttccacccctcaaaaccttccc 34757836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 18590137 - 18590266
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||||||||||||| |||||||||| | |||||| |||||||| |||| |||| ||||||||| || ||||||||        ||||||||||| | |||    
T  18590137 tatattatttttaaaattaaaaatagaataatcatatgcattaatttaccattttctaaaaaaacactcttttaa-attttttgaaagatttcttcgttt 18590235  T
Q  146 tccctcatattttccacccctcaaagccttc 176  Q
    |||||||||||||| | ||||||||| ||||    
T  18590236 tccctcatattttctatccctcaaagtcttc 18590266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 15803353 - 15803435
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||| ||||||||  ||||||  | |||| ||||||||| |||||||| ||||||||||||| ||||||||||||    
T  15803353 gaaagatttctcaattttcccctatatttctctccccccaaagcctttccttcccctcccctccaaactcccaaacaaagcct 15803435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 16519074 - 16518902
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| |||| |||| |||||||||| |  ||||| | |||||||||||| |||||| ||||||| | ||||| ||        ||||||||||||||    
T  16519074 tgttataatattcttaatattaaaaatatatgaatcataagcattagtttatgattctccaaaaaac-actctttcaaaaaaatgtgaaagatttctcca 16518976  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaagt 217  Q
    |||  | |  ||||| ||||||  |||||| || |||||||| ||||||||| ||| ||||||||||||||||||    
T  16518975 tttctctttgtatttaccaccctccaaagcttttccttcccctcccctccaa-ctcccaaacaaagcctaaaagt 16518902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 43100553 - 43100492
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa 104  Q
    ||||||| ||||||||| ||| |||||| |||||||||||| |||| |||||||||||||||    
T  43100553 tgttatactatttttaaaatttaaaatatagtaatcacatgtattaatttatcattctctaa 43100492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 198
Target Start/End: Original strand, 21835050 - 21835158
Alignment:
Q  90 tttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccc 189  Q
    ||||||||||||||||||| || ||||| ||        |||||| || |||||||||| | ||||||| |||||||||||||||| | | |||| ||||    
T  21835050 tttatcattctctaaaaaaacactctttcaaaaaaatgtgaaagaattttccattttccttaatatttttcacccctcaaagcctttcttacccctcccc 21835149  T
Q  190 tccaaactc 198  Q
    |||||||||    
T  21835150 tccaaactc 21835158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 183
Target Start/End: Complemental strand, 28539411 - 28539273
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctct-aaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||||||||||||| |||||||||| | |||| | |||||| | ||||||||||||| ||||||| | | ||||||        ||||||||||| |    
T  28539411 tgttatattatttttaaaattaaaaatata-taattatatgcataa-tttatcattctcttaaaaaactactattttaaatttttt-gaaagatttcttc 28539315  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccc 183  Q
    ||||||| ||||||||||||||||| |||| |||||| ||||    
T  28539314 attttccttcatattttccaccccttaaagtcttcccctccc 28539273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 30072345 - 30072265
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    ||||||| ||||||||| | |||||||||| ||||||||||| |||| |||||| |  |||||||||||| ||| ||||||    
T  30072345 gaaagatctctccatttcctctcatattttacacccctcaaaacctttccttcctcttccctccaaactcgcaagcaaagc 30072265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 41655284 - 41655225
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||| |||||||| ||||||||||  |||| ||||||||||||| ||||||||||||    
T  41655284 atatttttcacccctcgaagccttcccaccccctcccctccaaactcccaaacaaagcct 41655225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 36567155 - 36567094
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||| ||||| ||||||| |||| ||||  |||||||||||||||| |||||||||||    
T  36567155 atattttcaaccccccaaagccctcccctcccttcccctccaaactcacagacaaagcctaa 36567094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 726046 - 726109
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||| ||||||||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  726046 ttataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 726109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 4042060 - 4042126
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  4042060 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 4042126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 13765924 - 13765858
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  13765924 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 13765858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 38023432 - 38023366
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  38023432 tgttataatattcttaaaattaaaagtatattaatcataagaattagtttatcattctctaaaaaac 38023366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 38293984 - 38294050
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  38293984 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 38294050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 40357553 - 40357619
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  40357553 tgttataatattcttaaaattaaaattatattaatcataagtattagtttatcattctctaaaaaac 40357619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 43190459 - 43190378
Alignment:
Q  130 aaagatttctccattttccctcata-ttttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||||||||  ||||||  | | ||||||||| ||||||||||||    
T  43190459 aaagatttctctatttttcctcatatttttccacccct-aaagccttttcttcccttcacttccaaactcccaaacaaagcct 43190378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 44137296 - 44137342
Alignment:
Q  167 caaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||| |||||||||  ||||||||||||| ||||||||||||||    
T  44137296 caaagccctcccttcccttcccctccaaactcccaaacaaagcctaa 44137342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 16625673 - 16625632
Alignment:
Q  170 agccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| |||||||||| ||||||||||||| ||||||||||||    
T  16625673 agccctcccttcccctcccctccaaactcccaaacaaagcct 16625632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 16625789 - 16625724
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| |  ||||| | ||||| ||||||||||||||||||||    
T  16625789 tgttataatattcttaatattaaaaatatatgaatcataagcattggtttatcattctctaaaaaa 16625724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 29880860 - 29880925
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| | || |||||||||| | |||||| | ||||| ||||||||||||||||||||    
T  29880860 tgttataatattatcaaaattaaaaatatattaatcataagcattcgtttatcattctctaaaaaa 29880925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 32243571 - 32243636
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  32243571 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 32243636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 108
Target Start/End: Original strand, 36030897 - 36030954
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||| |||| |||||||||| | |||||| | |||||| |||||||||||||||||||    
T  36030897 tattcttaaaattaaaaatatattaatcataagcattaatttatcattctctaaaaaa 36030954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 36567263 - 36567198
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  36567263 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 36567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 36870418 - 36870499
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttcc-ccacccctccaaactcacaaacaaagc 209  Q
    |||| ||||||| ||||||||  ||||||| | |||| ||||||||| |||||| || ||||||||||||| |||| |||||    
T  36870418 gaaaaatttctcaattttcccctatatttttctccccccaaagcctttccttcctcctcccctccaaactcccaaataaagc 36870499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 44020435 - 44020500
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  44020435 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 44020500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 7184227 - 7184283
Alignment:
Q  53 tttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  7184227 tttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 7184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 11514958 - 11514914
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||| ||||  ||||||||||||| ||||||||||||||    
T  11514958 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaa 11514914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 14385177 - 14385241
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| ||||||||| |||||||||| | |||| | |  ||||| |||||||||||||||||||    
T  14385177 gttataatatttttaaaattaaaaatatactaataataaacattaatttatcattctctaaaaaa 14385241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 31584667 - 31584583
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||||| ||||| |   ||||||  | |||||||||| |||  ||||||| ||||||||||||| |||||||| |||||    
T  31584667 gaaagatttctcaatttttctctatatttctctcccctcaaagtcttttcttcccctcccctccaaactctcaaacaaaacctaa 31584583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 39750238 - 39750301
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||| ||||||||||| ||| |||||| || ||||| |||||||| ||||| ||||||||||||    
T  39750238 tgttacattatttttaaaatttaaaatatagcaatcatatgcattaatttat-attctctaaaaa 39750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 40211899 - 40211871
Alignment:
Q  188 cctccaaactcacaaacaaagcctaaaag 216  Q
    |||||||||||||||||||||||||||||    
T  40211899 cctccaaactcacaaacaaagcctaaaag 40211871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 37649601 - 37649432
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  37649601 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaattttttt-gaaagatttctcta 37649503  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||    
T  37649502 tttttcctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcctaa 37649432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 36886965 - 36887132
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||| ||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| |  |||||||        ||||||||||| ||    
T  36886965 tgttatattgtttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactacacttttaaaaaattt-gaaagatttcttca 36887063  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||  |||||||||||| ||||||||||||    
T  36887064 ttttccctcgtattttccacccctcaaagtctttccttccccttccctccaaactcgcaaacaaagcct 36887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 52068129 - 52067960
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| ||||    
T  52068129 tataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctctattt 52068031  T
Q  146 tccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaag 216  Q
    | ||||||||||| |||||||||||||||| | || ||  ||||||||||||  |||||||||||| ||||    
T  52068030 ttcctcatattttgcacccctcaaagcctttcttttccttcccctccaaacttccaaacaaagccttaaag 52067960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 34154323 - 34154156
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  34154323 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 34154225  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||  |||||||||| |||||||||||  ||| |||| ||  ||||||||||||| ||||||||||||    
T  34154224 ttttttctcatattttgcacccctcaaaatctttcctttccttcccctccaaactcccaaacaaagcct 34154156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 50226126 - 50226290
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| |||||||| ||| || | |||||||||||||||||||| | | |||| |        ||||| ||||||||    
T  50226126 tgttatattatttttaaaattaaaaatatagtaatcatatgaataaatttatcattctctaaaaaactattttttttaaattttttgaaagttttctcca 50226225  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    |||||  | ||||||||||||||||||| ||||||||||||| || |||||||||  ||||||||    
T  50226226 ttttctgttatattttccacccctcaaaaccttcccttcccctcctctccaaacttgcaaacaaa 50226290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 17760470 - 17760301
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||| ||||||| |    
T  17760470 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaaaatttctcta 17760372  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| |||||||| || |||||||||||||||| | || ||  |||||| |||||| |||| |||||||||    
T  17760371 tttttcctcatatgttgcacccctcaaagcctttcatttccttcccctctaaactcccaaataaagcctaa 17760301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 2909224 - 2909380
Alignment:
Q  54 ttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcat 153  Q
    |||||| |||||||||| |||||||| || ||||| |||||||||||||||||||| | ||||||||        ||||||| |||| |||||  |||||    
T  2909224 ttttaaaattaaaaataaagtaatcatatacattaatttatcattctctaaaaaactactcttttaaatttttt-gaaagatctctctattttttctcat 2909322  T
Q  154 attttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||    
T  2909323 attttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcct 2909380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 209
Target Start/End: Original strand, 69829 - 69992
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||||||||||| | |||||| |||  ||||| | || ||||| |||||||||||||||||||| | ||||||||        ||||||||||| ||||    
T  69829 ttatattatttttgaaattaaatatatggtaattatattcattaatttatcattctctaaaaaactactcttttaaaaaaatt-gaaagatttcttcatt 69927  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    |||||||||||||| |||||||||||  ||| |||||| | |||||||||| |||||||||||||    
T  69928 ttccctcatatttttcacccctcaaaatctttccttcctctcccctccaaattcacaaacaaagc 69992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 14439751 - 14439834
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||||| || ||| ||||||||||||| |||||||||||||    
T  14439751 gaaagatttctccatttttcctcatatttttcacccctcaaagtcttccgtttccctcccctccaaactcgcaaacaaagccta 14439834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 24369163 - 24369081
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||||| |||| |||||| |||||||||||| |||||||||| | |||||| |||||||||||||||||||    
T  24369163 gaaagatttctccatttttcctcgtattttgcacccctcaaagtcttcccttcctctcccctctaaactcacaaacaaagcct 24369081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 666390 - 666542
Alignment:
Q  61 attaaaaatacagtaatcacatgcattagtttatcattctctaaa-aaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttc 159  Q
    |||||||||| |||||||| |||||||| |||||||||||||||| |||| | ||||||||         |||||||||| |||||||||||||||||||    
T  666390 attaaaaatatagtaatcatatgcattaatttatcattctctaaacaaactactcttttaattttttta-aaagatttcttcattttccctcatattttc 666488  T
Q  160 cacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||||| ||| |||||  |  |||| ||||||| ||||||||| ||||    
T  666489 cacccctcaaagtctttccttcatcttcccttcaaactcgcaaacaaagtctaa 666542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 5584601 - 5584737
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||| | ||||||||        | |||||||||| |    
T  5584601 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaactactcttttaa-aaaatttgtaagatttctcta 5584699  T
Q  143 ttttccctcatattttccacccctcaaagccttccctt 180  Q
    |||| | ||||||||| |||||||||||||||| ||||    
T  5584700 tttttcttcatattttgcacccctcaaagcctttcctt 5584737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 180
Target Start/End: Complemental strand, 41817284 - 41817148
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        ||||||| |||| |    
T  41817284 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatctctcta 41817186  T
Q  143 ttttccctcatattttccacccctcaaagccttccctt 180  Q
    |||| ||| ||||||| ||||||||||| |||| ||||    
T  41817185 tttttccttatattttacacccctcaaaacctttcctt 41817148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 46001662 - 46001825
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| | ||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||         ||||||||||| |    
T  46001662 tgttataatgtttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaaatttttta-aaagatttctcta 46001760  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaa 207  Q
    |||| | ||||||||| ||||||||||| |||| |||| ||   ||||||||||||  |||||||    
T  46001761 tttttcttcatattttgcacccctcaaaacctttcctttcctttccctccaaactcctaaacaaa 46001825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 4204754 - 4204597
Alignment:
Q  54 ttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcat 153  Q
    |||||| |||||||||| |||||||| ||| |||| ||||||||||||||||||| | |   |||          ||||||||||||||||||||||| |    
T  4204754 ttttaaaattaaaaatatagtaatcatatgtattaatttatcattctctaaaaaaactactattttcatttttttgaaagatttctccattttccctcgt 4204655  T
Q  154 attttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    | |||||||| ||||||||||||| |||    ||||||||||||| ||||||||||||    
T  4204654 aatttccacctctcaaagccttccattctattcccctccaaactcccaaacaaagcct 4204597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 38795312 - 38795233
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaag 208  Q
    ||||||||||| |||||||||||||||||||||||  ||||||| ||| ||||||| || |||||||||| |||||||||    
T  38795312 gaaagatttcttcattttccctcatattttccacctttcaaagctttcacttcccctccgctccaaactcgcaaacaaag 38795233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 33324719 - 33324857
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctct-aaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||| ||||||||| | | |||||||   ||||||||         ||| | ||||||    
T  33324719 tgttatattatttttaaaattaaaattatagtaatcatatgcattaatttatcattatttaaaaaaactcctcttttaaaacattta-aaaaaattctcc 33324817  T
Q  142 attttccctcatattttccacccctcaaagccttcccttc 181  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  33324818 attttccctcatatttcccacccctcaaagtcttcccttc 33324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 27255303 - 27255372
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||||| |||||||||| || ||||| |||||||| |||||||||||||||||||| | ||||||||    
T  27255303 tatttttaaaattaaaaataaagcaatcatatgcattaatttatcattctctaaaaaactactcttttaa 27255372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 28848783 - 28848719
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| ||||||||| |||||||||| |||||||| | |||||| |||||||||||||||||||    
T  28848783 gttataatatttttaaaattaaaaatatagtaatcataggcattaatttatcattctctaaaaaa 28848719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 37875652 - 37875572
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    ||||||||| ||||||||| |||||||||| ||||||||||| | || || ||||| || |||||||||| ||||||||||    
T  37875652 gaaagatttttccattttctctcatatttttcacccctcaaaacatttccctcccctcctctccaaactcgcaaacaaagc 37875572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 39886909 - 39886843
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||||||||||||| | |||||||| | |||||| ||| |||| ||||||||||||||||||||    
T  39886909 tgttatattatttttaaaactaaaaatataataatcatatgtattaatttatcattctctaaaaaac 39886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 43036222 - 43036141
Alignment:
Q  130 aaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||| || |||||||||  |||||  |||||| ||||||| | |||||||| ||||||||||||| ||||||||||||    
T  43036222 aaagatttttcaattttcccttctatttctcaccccacaaagcccttccttcccctcccctccaaactcccaaacaaagcct 43036141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 50587216 - 50587295
Alignment:
Q  131 aagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||||||   ||||| |||||| ||||||||  ||||||||| ||| ||||||||| ||||||||||||    
T  50587216 aagatttctccattttcccctctatttcccacccttcaaagccc-cccttcccctcccttccaaactcccaaacaaagcct 50587295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 29092182 - 29092310
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| ||||||| || |||||||| |||||||| |||| ||||||||||||||  | ||||   |        |||||||||||| |    
T  29092182 tgttataatatttttaaaattaaaa-taaagtaatcatatgcattaatttaccattctctaaaaaattactctt---aaattttttgaaagatttctcta 29092277  T
Q  143 ttttccctcatattttccacccctcaaagcctt 175  Q
    |||| ||||||||||| ||||||||||| ||||    
T  29092278 tttttcctcatattttgcacccctcaaaacctt 29092310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 32287679 - 32287737
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaa 104  Q
    |||| ||||||||| | |||||||| |||||||| |||||||| |||||||||||||||    
T  32287679 tataatatttttaaaactaaaaatatagtaatcatatgcattaatttatcattctctaa 32287737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 49102875 - 49102793
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||| ||||| ||  ||||||  | |||| ||||||| | |||||||| ||||||||||||| ||||||||||||    
T  49102875 gaaagatttctcaatttttccctatatttctctccccccaaagcccttccttcccctcccctccaaactcccaaacaaagcct 49102793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 50247695 - 50247769
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    |||| ||||||||| ||||||| || | |||||| | | ||||||||||||||||||||||||| | ||||||||    
T  50247695 tataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaactattcttttaa 50247769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 50402837 - 50402903
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| |||||||||| | |||||| | | ||||||||||||||||| |||||||    
T  50402837 tgttataatatttttaaaattaaaaatatattaatcataagtattagtttatcattctcaaaaaaac 50402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 32672689 - 32672754
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||| |||||||||||| |||||||||| | |||||| ||  |||| |||||||||||||||||||    
T  32672689 tgttgtattatttttaaaattaaaaatataataatcatatatattaatttatcattctctaaaaaa 32672754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 47742775 - 47742811
Alignment:
Q  178 cttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||||||||||||||||||| |||||||||||||||    
T  47742775 cttccccacccctccaaactcccaaacaaagcctaaa 47742811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 51303029 - 51302993
Alignment:
Q  175 tcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||||||||||||||||| ||||||||||||    
T  51303029 tcccttccccacccctccaaactcccaaacaaagcct 51302993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 7915741 - 7915827
Alignment:
Q  129 gaaagatttctc-cattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    ||||||||||||  ||||||||| |||||| | ||||| ||||||| |||| ||||| ||| |||||||||  |||||||||||||||    
T  7915741 gaaagatttctcaaattttccct-atatttcctaccccccaaagccctcccctcccctcccgtccaaactccaaaacaaagcctaaaa 7915827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 11017697 - 11017763
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  11017697 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 11017763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 23871448 - 23871382
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  23871448 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 23871382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 33991637 - 33991703
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  33991637 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 33991703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 42162038 - 42161972
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| ||||||| || | |||||| |   |||||||||||||||||||||||||    
T  42162038 tgttataatatttttaaaattaaaagtatattaatcataaatattagtttatcattctctaaaaaac 42161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 45565226 - 45565292
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| ||||||| || | |||||| | | || ||||||||||||||||||||||    
T  45565226 tgttatagtatttttaaaattaaaagtatattaatcataagtataagtttatcattctctaaaaaac 45565292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 1278565 - 1278630
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||| ||||||    
T  1278565 tgttatagtattcttaaaattaaaaatatattaatcataagcattaatttatcattctccaaaaaa 1278630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 33991746 - 33991807
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| | ||||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  33991746 atatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 33991807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 36886784 - 36886739
Alignment:
Q  169 aagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    |||||||||| ||||  ||||||||||||| |||||||||||||||    
T  36886784 aagccttcccctcccttcccctccaaactcgcaaacaaagcctaaa 36886739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 213
Target Start/End: Original strand, 40136435 - 40136480
Alignment:
Q  168 aaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||    
T  40136435 aaagccttccctttccttcccctccaaactcgcaaacaaagcctaa 40136480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 43530283 - 43530206
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||| || | |||| |||||||||| | |||||| | |||||| ||||||| ||||||||||| || ||||||||    
T  43530283 tgttataatactcttaaaattaaaaatatattaatcataagcattaatttatcactctctaaaaaaacactcttttaa 43530206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 43571846 - 43571785
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| | ||||| |||||||||||| ||||  || |||||||||| ||||||||||||||    
T  43571846 atatttccaaccccccaaagccttcccctcccttcctctccaaactcccaaacaaagcctaa 43571785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 52073330 - 52073249
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcc 210  Q
    |||||||||  | ||||||||  |||||| | ||||  || ||||||||||||||| |||| |||||||| |||||||||||    
T  52073330 gaaagattttacaattttcccctatatttccaaccctccagagccttcccttcccctccccaccaaactcccaaacaaagcc 52073249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 1688199 - 1688139
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaa 106  Q
    |||| ||||||||| ||||||| || | |||||| | | ||||||||||||||||||||||    
T  1688199 tataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaa 1688139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 26345722 - 26345786
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||| ||||||||| || | ||||| | |||||| | |||||| |||||||||||||||||||    
T  26345722 gttataatatttttaaaataataaatatattaatcataagcattaatttatcattctctaaaaaa 26345786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 39508995 - 39509031
Alignment:
Q  175 tcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  39508995 tcccttcccctcccctccaaactcccaaacaaagcct 39509031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 39886827 - 39886767
Alignment:
Q  136 ttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaac 196  Q
    |||| ||||||||||| |||||| || |||| |||| |||| ||||||| |||||||||||    
T  39886827 ttcttcattttccctcgtatttttcatcccttaaagtcttctcttcccctcccctccaaac 39886767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 7170 - 7334
Alignment:
Q  46 tatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattt 145  Q
    |||| ||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||| | ||||||||        |||| ||||||||||||    
T  7170 tataatatttttaaaattaaaaataaagtaatcacatgcattaatttatcattttctaaaaaactactcttttaa-aaaaattgaaaaatttctccattt 7268  T
Q  146 tccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||||||| ||||||||||  ||||||||| |||| ||  |||||||||||||||||||| ||||    
T  7269 tccctcatactttccaccccaaaaagccttctcttctccttccctccaaactcacaaacaatgcct 7334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 32719284 - 32719117
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  32719284 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 32719186  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||  |||||||||| |||||||||||||||| |||| ||  |||||| |||||| ||||||||||||    
T  32719185 tttttactcatattttgcacccctcaaagcctttcctttccttcccctctaaactcccaaacaaagcct 32719117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 20820525 - 20820354
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacat-----gcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagattt 137  Q
    ||||||||||||||||| |||||||||| |||||||| ||     |||||| ||||| |||||||||||||| | ||||||||        ||||   ||    
T  20820525 tgttatattatttttaaaattaaaaatatagtaatcatatcttatgcattaatttattattctctaaaaaactactcttttaaaaaaaattgaaatgatt 20820426  T
Q  138 ctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagc 209  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| |||||| |||| | ||||||||||    
T  20820425 ctccattttccctcatattttccacccctcaaatcttttccttcccctcccctctaaacccgcaaacaaagc 20820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 12779609 - 12779778
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| | |||||| |||||||| |||||||||||||||||| | | |||||| |        |||| |||||||||    
T  12779609 tgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctctaaaaacctactctttt-agaaaatttgaaaaatttctcca 12779707  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| ||||||||||| |||||||||||| ||| | || ||  ||||| ||||||| ||||||||||||||    
T  12779708 tttttcctcatattttgcacccctcaaagtctttcatttccttccccttcaaactcccaaacaaagcctaa 12779778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 6687933 - 6687856
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||    
T  6687933 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa 6687856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 24849533 - 24849381
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||||||||||| | ||| |||||| ||| |||| ||  |||| ||||||||||| | |||||||| ||||||||        |||||||||||  |||    
T  24849533 ttatattatttttcaaatttaaaatatagtgatcatatttattaatttatcattctttgaaaaaccactcttttaaaaaaaattgaaagatttcttaatt 24849434  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccccacccctccaaact 197  Q
    |||||||||||||||||||||||||| |||| | |||||| || |||||||||    
T  24849433 ttccctcatattttccacccctcaaaacctttcattcccctcctctccaaact 24849381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 11180105 - 11179946
Alignment:
Q  51 tatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccct 150  Q
    ||||||||| |||||||||| |||||||| |||||||| ||||||||| |||||||||| | ||||||||        |||  ||||||| ||||  |||    
T  11180105 tatttttaaaattaaaaataaagtaatcatatgcattaatttatcattatctaaaaaactactcttttaaaaatttt-gaagaatttctctatttatcct 11180007  T
Q  151 catattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||||| |||||||||||||| | |||| ||  ||| ||||||||| ||||||||||||    
T  11180006 catattttgcacccctcaaagcccttcctttccttcccttccaaactctcaaacaaagcct 11179946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 26289647 - 26289724
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||| ||||  ||||||||||    
T  26289647 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctacaaaaataatcttttaa 26289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 183
Target Start/End: Complemental strand, 33590312 - 33590176
Alignment:
Q  45 ttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccatt 144  Q
    ||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||| ||||||||| |    
T  33590312 ttataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-aaaaattgaaaaatttctccaat 33590214  T
Q  145 ttccctcatattttccacccctcaaagccttcccttccc 183  Q
    ||  |||||||||| ||||||||||| |||| |||||||    
T  33590213 ttttctcatattttgcacccctcaaa-cctttccttccc 33590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 213
Target Start/End: Complemental strand, 28551805 - 28551723
Alignment:
Q  129 gaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||||||||| |||  |||||||||||||||||  ||||||  ||||||||||| ||||||||||||| ||||||||||||||    
T  28551805 gaaagatttctctatt--ccctcatattttccacctttcaaagttttcccttcccctcccctccaaactcccaaacaaagcctaa 28551723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 175
Target Start/End: Original strand, 6855747 - 6855878
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| |||||||||| | |||||| || ||||| ||||||||| | |||||||| | ||||| ||         ||| |||| | ||    
T  6855747 tgttatattatttttaaaattaaaaatatattaatcatatacattaatttatcattatttaaaaaactattctttcaaatttttta-aaatattttttca 6855845  T
Q  143 ttttccctcatattttccacccctcaaagcctt 175  Q
    |||||||||||||||||||||||||||||||||    
T  6855846 ttttccctcatattttccacccctcaaagcctt 6855878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 1567377 - 1567443
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| |||||||||||||||    
T  1567377 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaac 1567443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 33755135 - 33755299
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||||||||||||| ||| |||||| |||||||| || | ||| ||||||||||| |||||||  ||||||||||        ||||||||| | ||    
T  33755135 tgttatattatttttaaaatttaaaatatagtaatcatattctttaatttatcattctataaaaaattaatcttttaa-attttttgaaagattttttca 33755233  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||||| |||||||||||  |||||| ||||  ||     ||||||||||||| ||||| ||||||||    
T  33755234 ttttccctcgtattttccaccattcaaagtcttcattt-----cccctccaaactcgcaaacgaagcctaa 33755299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 19477352 - 19477417
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||||| ||| |||||||| |||||||| ||||||||||||| |||||    
T  19477352 tgttataatatttttaaaattaaatatatagtaatcatatgcattaatttatcattctctgaaaaa 19477417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 22788505 - 22788441
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaa 107  Q
    ||||||| ||||||||| ||||||| || ||||||||||||||||| ||||||||| | ||||||    
T  22788505 tgttataatatttttaaaattaaaattatagtaatcacatgcattaatttatcattttttaaaaa 22788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 26713949 - 26714014
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    |||||||||||| |||| |||||||||| |  ||||| | |||||||||||||||||| |||||||    
T  26713949 tgttatattattcttaatattaaaaatatatgaatcataagcattagtttatcattctataaaaaa 26714014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 29054664 - 29054740
Alignment:
Q  44 gttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaa 120  Q
    |||||| |||| |||| || ||||||| |||||||| ||  |||| |||||||||||||||||||| | ||||||||    
T  29054664 gttataatattattaaaataaaaaatatagtaatcatatatattaatttatcattctctaaaaaactattcttttaa 29054740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 1029389 - 1029451
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaa 105  Q
    ||||||| |||| |||| ||||||| || | |||||||| | |||||||||||||||||||||    
T  1029389 tgttataatattcttaaaattaaaagtatattaatcacaagtattagtttatcattctctaaa 1029451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 5825428 - 5825494
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  5825428 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 5825494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 24734976 - 24735042
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  24734976 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 24735042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 26481116 - 26481050
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  26481116 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 26481050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 34914723 - 34914789
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  34914723 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 34914789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 4465022 - 4465087
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| |||||||||| | |||||| |  ||||| ||||||||||| |||||||    
T  4465022 tgttataatatttttaaaattaaaaatatattaatcataaacattaatttatcattctttaaaaaa 4465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 26574380 - 26574315
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  26574380 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 26574315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 597120 - 597060
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctcta 103  Q
    ||||||| ||||||||| || |||||||||||||||| |  ||||| |||||| |||||||    
T  597120 tgttataatatttttaaaataaaaaatacagtaatcataaacattaatttatcgttctcta 597060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 43 - 203
Target Start/End: Original strand, 37217 - 37377
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctct-aaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||| ||||||| | ||||||||         |||||||||||     
T  37217 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaaactactcttttaaaaaattta-aaagatttctca 37315  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaa 203  Q
    ||| |||||||||||||| ||||||||||| ||| | ||| || ||||||||||||||||||    
T  37316 attctccctcatattttctacccctcaaagtctttcattctcctcccctccaaactcacaaa 37377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 43 - 200
Target Start/End: Original strand, 30549 - 30706
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctct-aaaaaaccaatcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||||| ||||||| | ||||||||         |||||||||||     
T  30549 tgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctaaaaaaactactcttttaaaaaattta-aaagatttctca 30647  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcac 200  Q
    ||| |||||||||||||| | ||||||||| ||| | ||| || |||||||||||||||    
T  30648 attctccctcatattttctaaccctcaaagtctttcattctcctcccctccaaactcac 30706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 5884 - 5799
Alignment:
Q  130 aaagatttctccattttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||| |||||||| |||||||    
T  5884 aaagatttctccattttccctcatattttccacccctcaaagtcttcccttcctcttccctccaaactcccaaacaaaacctaaaa 5799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 26476 - 26644
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaa-tcttttaannnnnnnngaaagatttctcc 141  Q
    ||||||| ||||||||| |||||||||| |||||||| ||| |||| ||||||||||||||||||| | | ||||||||        ||| ||||||||     
T  26476 tgttataatatttttaaaattaaaaataaagtaatcatatgtattaatttatcattctctaaaaaaactactcttttaaattttttggaa-gatttctct 26574  T
Q  142 attttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||||  |||||||||| |||||||||||||||| |||| ||  ||||||||||||| ||||||||||||    
T  26575 attttttctcatattttgcacccctcaaagcctttcctttccttcccctccaaactcccaaacaaagcct 26644  T

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Target: scaffold0248 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 181 - 12
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||        |||||||||||| |    
T  181 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctctaaaaaactactcttttaa-attttttgaaagatttctcta 83  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||| |||||||| || ||||| |||||||||| | || |   |||||| |||||| |||| |||||||||    
T  82 tttttcctcatatgttgcacccttcaaagcctttcatttctttcccctctaaactcccaaataaagcctaa 12  T

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Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 93491 - 93362
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| ||||| |||||||||||||| | ||||||||        |||||||||||| |    
T  93491 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttattattctctaaaaaactactcttttaa-attttttgaaagatttctcta 93393  T
Q  143 ttttccctcatattttccacccctcaaagcc 173  Q
    |||| ||||||||||| ||||||||||||||    
T  93392 tttttcctcatattttgcacccctcaaagcc 93362  T

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Target: scaffold0179 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 211
Target Start/End: Original strand, 939 - 1107
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| || ||||| | |||||| | |||||||| ||| ||||||||||||| |||| ||||||||        |||||||||||| |    
T  939 tgttataatatttttaaaataaaaaacatagtaattatatgcattaatttctcattctctaaaataccactcttttaaagttttttgaaagatttctcta 1038  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    ||||  ||||||||||  ||||||||||||||| ||||  |  |||||||||||||  |||||||||||    
T  1039 ttttttctcatattttgaacccctcaaagcctttccttttcttcccctccaaactcctaaacaaagcct 1107  T

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Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 2008 - 1839
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||||| |||||||| |||||||| |||| ||||||||||||||  | ||||||||        | |||||||||| |    
T  2008 tgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttaccattctctaaaaaattactcttttaa-aaaatttgtaagatttctcta 1910  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    || | | ||||||||| | |||||||||||||| |||| ||  ||||| |||| || |||| |||||||||    
T  1909 ttattcttcatattttacgcccctcaaagcctttcctttccttccccttcaaattcgcaaagaaagcctaa 1839  T

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Target: scaffold0051 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 676 - 509
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| || ||||| | | |||| | |||||||| ||| ||||||||||||| |||| ||||||||        |||||||||| | |    
T  676 tgttataatatttttaaaatgaaaaacatattaattatatgcattaatttctcattctctaaaataccactcttttaaatttttt-gaaagatttcccta 578  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| |||||||||||  ||||||||||||||| ||||  |  ||| ||||||||| ||||||||||||    
T  577 tttttcctcatatttttaacccctcaaagcctttccttttcttcccttccaaactcccaaacaaagcct 509  T

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Target: scaffold0051; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 211
Target Start/End: Complemental strand, 3553 - 3386
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctcca 142  Q
    ||||||| ||||||||| |||||||| | |||||| | ||| |||| ||||||||| ||||||| || | ||||||||        |||||||||||| |    
T  3553 tgttataatatttttaaaattaaaaacatagtaattatatgaattaatttatcattatctaaaatactactcttttaaatttttt-gaaagatttctcta 3455  T
Q  143 ttttccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcct 211  Q
    |||| ||||||||||| ||||| |||||||||| | ||  |  ||| ||||||||| ||||||||||||    
T  3454 tttttcctcatattttgcacccatcaaagcctttcattttcttcccttccaaactcccaaacaaagcct 3386  T

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Target: scaffold0991 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 491 - 573
Alignment:
Q  133 gatttctccattttccctcatatttt-ccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaaa 214  Q
    ||||||| |||||||||||||||||| |||||| ||| | ||||||||||||| ||||||||||||  ||||||||| |||||    
T  491 gatttcttcattttccctcatatttttccacccttcacaaccttcccttcccctcccctccaaactttcaaacaaagtctaaa 573  T

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Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 181
Target Start/End: Complemental strand, 44944 - 44825
Alignment:
Q  61 attaaaaatacagtaatcacatgcattagtttatcattctctaaaaaaccaatcttttaannnnnnnngaaagatttctccattttccctcatattttcc 160  Q
    |||||||||| |||||||| ||||||||  ||||||||||||||||||  | ||||||||         |||||||| | |||||||||| |||||||||    
T  44944 attaaaaatatagtaatcatatgcattaaattatcattctctaaaaaattactcttttaaaaaattta-aaagattttttcattttccctaatattttcc 44846  T
Q  161 acccctcaaagccttcccttc 181  Q
    |||| |||||  |||||||||    
T  44845 acccgtcaaaatcttcccttc 44825  T

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Target: scaffold0717 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 1674 - 1739
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | | ||||||||||||||||||||||||    
T  1674 tgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctctaaaaaa 1739  T

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Target: scaffold0717; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 1783 - 1844
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| | ||||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  1783 atatttccaaccccccaaagccctcccctcccttcccctccaaactctcaaacaaagcctaa 1844  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 90870 - 90805
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| ||||||||| ||||||||||  ||||||| | |||||| ||||||||||| |||||||    
T  90870 tgttataatatttttaaaattaaaaatattgtaatcataagcattaatttatcattctttaaaaaa 90805  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Complemental strand, 19375 - 19291
Alignment:
Q  129 gaaagatttctccatttt-ccctcatattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagccta 212  Q
    |||||||||||||||||| ||||  ||||| ||||||||||||||  || | ||||  |||||| |||||| |||||||||||||    
T  19375 gaaagatttctccatttttcccttttatttcccacccctcaaagctctctcctcccttcccctcaaaactcccaaacaaagccta 19291  T

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Target: scaffold0140; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 19571 - 19605
Alignment:
Q  181 ccccacccctccaaactcacaaacaaagcctaaaa 215  Q
    |||| ||||||||||||||||||||||||||||||    
T  19571 ccccgcccctccaaactcacaaacaaagcctaaaa 19605  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 3655 - 3589
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  3655 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 3589  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 35440 - 35374
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaac 109  Q
    ||||||| |||| |||| ||||||| || | |||||| | | |||||||||||||||||||||||||    
T  35440 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaac 35374  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 35332 - 35271
Alignment:
Q  152 atattttccacccctcaaagccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    |||||| | ||||| ||||||| |||| ||||  ||||||||||||| ||||||||||||||    
T  35332 atatttccaaccccccaaagccctcccctcccttcccctccaaactcccaaacaaagcctaa 35271  T

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Target: scaffold1562 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 236 - 301
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  236 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 301  T

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Target: scaffold1158 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 2357 - 2292
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  2357 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 2292  T

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Target: scaffold0636 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 8487 - 8552
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| ||||||| || | |||||| | | ||||||||||||||||||||||||    
T  8487 tgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctctaaaaaa 8552  T

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Target: scaffold0245 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 4242 - 4307
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||| ||||||    
T  4242 tgttatagtattcttaaaattaaaaatatattaatcataagcattaatttatcattctccaaaaaa 4307  T

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Target: scaffold0229 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 4573 - 4638
Alignment:
Q  43 tgttatattatttttaagattaaaaatacagtaatcacatgcattagtttatcattctctaaaaaa 108  Q
    ||||||| |||| |||| |||||||||| | |||||| | |||||| |||||||||||| ||||||    
T  4573 tgttatagtattcttaaaattaaaaatatattaatcataagcattaatttatcattctccaaaaaa 4638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 59711 - 59670
Alignment:
Q  172 ccttcccttccccacccctccaaactcacaaacaaagcctaa 213  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||    
T  59711 ccttcccctcccctcccctccaaactcccaaacaaagcctaa 59670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1163 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 1975 - 1931
Alignment:
Q  166 tcaaagccttcccttccccacccctccaaactcacaaacaaagcc 210  Q
    |||||| |||||||||||  ||||||||||||| |||||||||||    
T  1975 tcaaagtcttcccttcccttcccctccaaactcgcaaacaaagcc 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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