View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1248-INSERTION-8 (Length: 365)
Name: NF1248-INSERTION-8
Description: NF1248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1248-INSERTION-8 |
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Alignment Details
Target: chr1 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 8 - 313
Target Start/End: Original strand, 46901201 - 46901506
Alignment:
| Q |
8 |
tctgcgatacaagcggcggaggtgagagctacggggagtaatattataacaccgggaggtttggcttcaatggctcaatctgcagcagctttcaatgctg |
107 |
Q |
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| T |
46901201 |
tctgcgatacaagcggcggaggtgagagctacggggagtaatgttataacaccgggaggtttggcttcaatggctcaatctgcagcagctttcaatgctg |
46901300 |
T |
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| Q |
108 |
agtgtcaacgtgaggaggagaagattaagatgggagatgttctgaccggagcaacagcgaagctgccagctgataaggcggcgacaaggcaagacgctgc |
207 |
Q |
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| T |
46901301 |
agtgtcaacgtgaggaggagaagattaagatgggagatgttctgaccggagcaacagcgaagctgccagctgataaggcggcgacaaggcaagatgctgc |
46901400 |
T |
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| Q |
208 |
tggggtggctagtgctgagatgaggaataatcctgatgctactgctactcctggtggtgtagctgcttctgttgctgcggctgctaggctcaatgaaaac |
307 |
Q |
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| T |
46901401 |
tggggtggctagtgctgagatgaggaataatcctgatgctactgctactcctggtggtgtagctgcttctgttgctgcggctgctaggctcaatgaaaac |
46901500 |
T |
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| Q |
308 |
gtgggc |
313 |
Q |
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|||||| |
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| T |
46901501 |
gtgggc |
46901506 |
T |
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