View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12484_high_2 (Length: 235)
Name: NF12484_high_2
Description: NF12484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12484_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 224
Target Start/End: Complemental strand, 11204801 - 11204586
Alignment:
| Q |
9 |
aacctgtgattcaaaagatttattacatgccagtgaaattttcaactgcaattacagctaagcatgaatatgaatccgataaatgagtttagttgctatc |
108 |
Q |
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| T |
11204801 |
aacctgtgattcaaaagatttattacatgccagtgaaattttcaactgcaattacagctaagcatgaatatgaatccgataaatgagtttagttgctatc |
11204702 |
T |
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| Q |
109 |
cttctacttaccaacggtacattatgaagaggtttaatgtctttggtctcgttttcaattgtccataatctaacaaaaccattacccgcaccagatgcgg |
208 |
Q |
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| T |
11204701 |
cttctacttaccaacggtacattatgaagaggtttaatgtctttggtctcgttttcaattgtccataatctaacaaaaccattacccgcaccagatgcgg |
11204602 |
T |
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| Q |
209 |
caaggtctctgctcct |
224 |
Q |
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| T |
11204601 |
caaggtcactgttcct |
11204586 |
T |
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