View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12489_low_3 (Length: 415)

Name: NF12489_low_3
Description: NF12489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12489_low_3
NF12489_low_3
[»] chr6 (71 HSPs)
chr6 (19-397)||(27706446-27706824)
chr6 (19-397)||(27678711-27679089)
chr6 (88-397)||(27677658-27677967)
chr6 (88-397)||(27593064-27593373)
chr6 (52-386)||(31284086-31284420)
chr6 (90-392)||(26622812-26623114)
chr6 (90-392)||(26728790-26729092)
chr6 (24-397)||(27338109-27338483)
chr6 (24-397)||(27398849-27399223)
chr6 (52-397)||(27611046-27611391)
chr6 (52-397)||(27718423-27718768)
chr6 (52-397)||(27724889-27725234)
chr6 (52-391)||(27698544-27698882)
chr6 (92-388)||(26861454-26861750)
chr6 (52-397)||(28780937-28781282)
chr6 (24-397)||(27604749-27605136)
chr6 (52-397)||(28786076-28786421)
chr6 (52-397)||(28792197-28792542)
chr6 (24-390)||(26655751-26656125)
chr6 (24-390)||(26761722-26762096)
chr6 (15-390)||(26802191-26802578)
chr6 (52-383)||(26823644-26823969)
chr6 (152-397)||(25579617-25579862)
chr6 (114-391)||(26884023-26884302)
chr6 (171-397)||(26646396-26646622)
chr6 (171-397)||(26752364-26752590)
chr6 (66-369)||(27229044-27229347)
chr6 (152-397)||(26142763-26143008)
chr6 (152-397)||(25481640-25481885)
chr6 (152-392)||(26055824-26056064)
chr6 (152-392)||(26075794-26076034)
chr6 (143-391)||(27531247-27531495)
chr6 (152-382)||(28234462-28234692)
chr6 (152-397)||(25538438-25538683)
chr6 (152-397)||(26048743-26048988)
chr6 (152-397)||(26069912-26070157)
chr6 (152-389)||(28242702-28242939)
chr6 (254-389)||(28181114-28181249)
chr6 (228-389)||(28149912-28150072)
chr6 (90-389)||(28139377-28139676)
chr6 (254-389)||(28185366-28185501)
chr6 (254-389)||(28226950-28227085)
chr6 (269-389)||(28297765-28297885)
chr6 (269-389)||(28514188-28514308)
chr6 (254-389)||(28325481-28325616)
chr6 (270-389)||(26341986-26342105)
chr6 (269-389)||(26937109-26937229)
chr6 (254-383)||(2184288-2184417)
chr6 (173-385)||(28098425-28098637)
chr6 (258-372)||(25506978-25507092)
chr6 (186-389)||(26848592-26848795)
chr6 (173-384)||(26974971-26975182)
chr6 (254-383)||(2184898-2185027)
chr6 (296-392)||(27427655-27427751)
chr6 (224-382)||(26893530-26893688)
chr6 (337-386)||(25071742-25071791)
chr6 (184-389)||(26635620-26635825)
chr6 (184-389)||(26741586-26741791)
chr6 (173-386)||(26949580-26949793)
chr6 (19-58)||(27593369-27593408)
chr6 (19-58)||(27677963-27678002)
chr6 (52-228)||(27427816-27427990)
chr6 (345-389)||(27214508-27214552)
chr6 (345-389)||(27234676-27234720)
chr6 (185-389)||(27665169-27665373)
chr6 (173-384)||(26959084-26959296)
chr6 (152-312)||(29825925-29826085)
chr6 (56-110)||(25538375-25538429)
chr6 (266-303)||(28481232-28481269)
chr6 (254-303)||(29733186-29733235)
chr6 (266-303)||(29793656-29793693)
[»] scaffold0349 (3 HSPs)
scaffold0349 (52-397)||(3465-3811)
scaffold0349 (52-397)||(14400-14743)
scaffold0349 (52-162)||(8080-8190)
[»] scaffold0419 (1 HSPs)
scaffold0419 (24-397)||(7294-7668)
[»] scaffold0277 (2 HSPs)
scaffold0277 (52-397)||(4715-5060)
scaffold0277 (52-397)||(13676-14021)
[»] chr4 (10 HSPs)
chr4 (52-397)||(18699431-18699776)
chr4 (52-397)||(18655508-18655853)
chr4 (52-397)||(18679598-18679943)
chr4 (52-397)||(18731535-18731880)
chr4 (88-397)||(18724116-18724425)
chr4 (296-392)||(17989089-17989185)
chr4 (296-392)||(18073804-18073900)
chr4 (52-228)||(17989250-17989424)
chr4 (52-228)||(18073565-18073739)
chr4 (270-389)||(5091006-5091125)
[»] chr1 (3 HSPs)
chr1 (88-392)||(268393-268697)
chr1 (57-397)||(28164393-28164733)
chr1 (60-397)||(28127710-28128042)
[»] scaffold1254 (1 HSPs)
scaffold1254 (24-348)||(10-335)
[»] chr8 (2 HSPs)
chr8 (86-397)||(29273814-29274125)
chr8 (173-313)||(31903770-31903910)
[»] scaffold0038 (4 HSPs)
scaffold0038 (152-389)||(34623-34860)
scaffold0038 (152-389)||(42864-43101)
scaffold0038 (254-389)||(27448-27583)
scaffold0038 (254-389)||(116796-116931)
[»] scaffold0019 (1 HSPs)
scaffold0019 (171-389)||(58334-58552)
[»] chr2 (2 HSPs)
chr2 (261-389)||(3279695-3279823)
chr2 (337-389)||(17993736-17993788)
[»] scaffold0003 (2 HSPs)
scaffold0003 (296-392)||(59612-59708)
scaffold0003 (52-228)||(59373-59547)
[»] chr5 (1 HSPs)
chr5 (251-382)||(16689008-16689139)


Alignment Details
Target: chr6 (Bit Score: 363; Significance: 0; HSPs: 71)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 19 - 397
Target Start/End: Complemental strand, 27706824 - 27706446
Alignment:
Q  19 agacttcacagaccacaaaaacttctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttcc 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706824 agacttcacagaccacaaaaacttctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttcc 27706725  T
Q  119 acttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatg 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  27706724 acttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatg 27706625  T
Q  219 acaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27706624 acaagggaatccacaccttcattgacaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttat 27706525  T
Q  319 tcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27706524 tcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 27706446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 19 - 397
Target Start/End: Original strand, 27678711 - 27679089
Alignment:
Q  19 agacttcacagaccacaaaaacttctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27678711 agacttcacagaccacaaaaacttctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttcc 27678810  T
Q  119 acttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  ||    
T  27678811 acttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactg 27678910  T
Q  219 acaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttat 318  Q
    ||||||||||| ||||||||||||| ||  |||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27678911 acaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttat 27679010  T
Q  319 tcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27679011 tcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 27679089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 88 - 397
Target Start/End: Complemental strand, 27677967 - 27677658
Alignment:
Q  88 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 187  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  27677967 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggt 27677868  T
Q  188 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 287  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27677867 ttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 27677768  T
Q  288 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 387  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27677767 tcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 27677668  T
Q  388 ctacaggaca 397  Q
    ||||| ||||    
T  27677667 ctacaagaca 27677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 88 - 397
Target Start/End: Complemental strand, 27593373 - 27593064
Alignment:
Q  88 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27593373 tctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggt 27593274  T
Q  188 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 287  Q
    |||||||| ||||||||||||||| ||  ||||||||||||| |||||||||||||  |  |||  |||||||||||  |||||||||||||||||||||    
T  27593273 ttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttc 27593174  T
Q  288 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 387  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||    
T  27593173 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattg 27593074  T
Q  388 ctacaggaca 397  Q
    ||||| ||||    
T  27593073 ctacaagaca 27593064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 52 - 386
Target Start/End: Original strand, 31284086 - 31284420
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||| ||||| |||||| |  |||||| |||||||||||||||||||||| ||| ||||||| |||||||||||||||  | |||||||||||||    
T  31284086 attctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaataccaagta 31284185  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| |||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||| ||  |||||||||||||||||||||||||||  ||  ||    
T  31284186 ttccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatagtg 31284285  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    ||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||||||| || |||||||||  || |||||||||||| ||    
T  31284286 aacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtc 31284385  T
Q  352 attttgtttggacgaacttgtccacatcattcact 386  Q
     ||||||||||||||||||||||||||||||||||    
T  31284386 gttttgtttggacgaacttgtccacatcattcact 31284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 90 - 392
Target Start/End: Original strand, 26622812 - 26623114
Alignment:
Q  90 tcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggttt 189  Q
    ||||||||||||||||||| | ||||||| |||||||||||||| | | |||||||||||| ||||| |||||||||||  |||||||||||||||||||    
T  26622812 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26622911  T
Q  190 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 289  Q
    ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||  |    
T  26622912 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26623011  T
Q  290 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    || || || |||||||||||||||||||||||||||||||||  || |||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  26623012 aatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgct 26623111  T
Q  390 aca 392  Q
    |||    
T  26623112 aca 26623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 90 - 392
Target Start/End: Original strand, 26728790 - 26729092
Alignment:
Q  90 tcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggttt 189  Q
    ||||||||||||||||||| | ||||||| |||||||||||||| | | |||||||||||| ||||| |||||||||||  |||||||||||||||||||    
T  26728790 tcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggttt 26728889  T
Q  190 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 289  Q
    ||| || ||||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||| ||||||| ||||||||||  |    
T  26728890 cactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgac 26728989  T
Q  290 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    || || || |||||||||||||||||||||||||||||||||  || |||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  26728990 aatgctatcgaagagtctaggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgct 26729089  T
Q  390 aca 392  Q
    |||    
T  26729090 aca 26729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 397
Target Start/End: Complemental strand, 27338483 - 27338109
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccactt 122  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| || ||||||| |||    
T  27338483 tcacagaccacaaaaacttactcattcatattctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctctt 27338384  T
Q  123 caatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaa 222  Q
    ||||||||| || || ||||||||| || ||||||||||| || |    ||||||||  |||||||| ||||| ||||||||||||||| ||  ||||||    
T  27338383 caatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaa 27338284  T
Q  223 gggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcct 322  Q
    ||||||| | |||||||||||  |  | || ||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||     
T  27338283 gggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattccc 27338184  T
Q  323 gtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     | ||||||   | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27338183 atattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagaca 27338109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 397
Target Start/End: Complemental strand, 27399223 - 27398849
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccactt 122  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| || ||||||| |||    
T  27399223 tcacagaccacaaaaacttactcattcatattctcaaacttttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctctt 27399124  T
Q  123 caatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaa 222  Q
    ||||||||| || || ||||||||| || ||||||||||| || |    ||||||||  |||||||| ||||| ||||||||||||||| ||  ||||||    
T  27399123 caatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaa 27399024  T
Q  223 gggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcct 322  Q
    ||||||| | |||||||||||  |  | || ||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||     
T  27399023 gggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctaggattttgattccc 27398924  T
Q  323 gtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     | ||||||   | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  27398923 atattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagaca 27398849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 27611391 - 27611046
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || | ||||||||||||||| | ||| ||||||  ||||| |||||||||  | ||  ||||||||     
T  27611391 attctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatggattcacttaccaagtg 27611292  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  27611291 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27611192  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | |||| |||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27611191 atcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27611092  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     |||||||||||||||||||||||||| ||||||||||||| ||||    
T  27611091 gttttgtttggacgaacttgtccacataattcactgctacaagaca 27611046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 27718768 - 27718423
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||||||||  |||||||| || |||||||||||| |||||||||| ||| ||| ||||| | ||| |||  | ||  ||||||||     
T  27718768 attctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtg 27718669  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||| || |||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  27718668 ttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27718569  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||    
T  27718568 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttc 27718469  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     |||||||||||||||||||||||||| ||||||||||||| ||||    
T  27718468 gttttgtttggacgaacttgtccacataattcactgctacaagaca 27718423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 27725234 - 27724889
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||||||||  |||||||| || | |||||||||| |||||||||| ||| ||| ||||| |||||||||  | ||  ||||||||     
T  27725234 attctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 27725135  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| || ||   |||||||||| ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  27725134 ttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27725035  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  27725034 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttc 27724935  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     |||||||||||||||||||||||||| ||||||||||||| ||||    
T  27724934 gttttgtttggacgaacttgtccacataattcactgctacaagaca 27724889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 52 - 391
Target Start/End: Complemental strand, 27698882 - 27698544
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||| ||||  |||||||| || |||||||||||| |||||||||| ||| ||||||||| |||||||||  | ||  ||||||||     
T  27698882 attctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 27698784  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||| ||||||| || ||   |||||||||| ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  27698783 ttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 27698684  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  27698683 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttc 27698584  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctac 391  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  27698583 attttgtttggacgaacttgtccacataattcactgctac 27698544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 92 - 388
Target Start/End: Original strand, 26861454 - 26861750
Alignment:
Q  92 atggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttca 191  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||  | ||||||||| ||||||||||||||||||||| ||||||||||||| ||||| |    
T  26861454 atggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggtttta 26861553  T
Q  192 ccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaa 291  Q
    |||| ||||||||||||||| ||  |||||||||||| ||||||||||| ||  ||| |||||||||||||||||||||||||| |  ||||||   |||    
T  26861554 ccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaa 26861653  T
Q  292 ggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgc 388  Q
     ||||||||||||||||| ||||| |||||||||||||||  || |||||||||||| |||||||||||||| ||||||||||| |||||| |||||    
T  26861654 tgccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactgc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 52 - 397
Target Start/End: Original strand, 28780937 - 28781282
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||| ||||||| ||||| |||||| ||  | ||  ||||||||     
T  28780937 attctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtg 28781036  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  28781037 ttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28781136  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||       
T  28781137 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaa 28781236  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||| |||||||||||||| ||||| ||||| ||||||| ||||    
T  28781237 attttgcttggacgaacttgttcacattattcattgctacaagaca 28781282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 24 - 397
Target Start/End: Complemental strand, 27605136 - 27604749
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattct-------caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctct 115  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||||||||||| ||||||||| || ||||||||||||||||| ||||| |||     
T  27605136 tcacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctca 27605037  T
Q  116 tccac------ttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaagg 209  Q
    ||| |      |||| |||||||||  | ||  |||||||| ||||| ||||| || ||   ||||||||| |||||||| ||||| |||||||||||||    
T  27605036 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 27604937  T
Q  210 cttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctag 309  Q
    || ||  |||||||||||| || |||||||||||  |  |||| |||| |||||| ||||||||||||||| ||||||||||||||||||| || || ||    
T  27604936 ctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatccag 27604837  T
Q  310 gatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  27604836 gatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattgctacacgaca 27604749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 52 - 397
Target Start/End: Original strand, 28786076 - 28786421
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||| ||| ||| ||||| |||||||||  | ||  ||||||||     
T  28786076 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 28786175  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  28786176 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28786275  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| | ||       
T  28786276 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaa 28786375  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||| |||||||||||||| ||||| ||||| ||||||| ||||    
T  28786376 attttgcttggacgaacttgttcacattattcattgctacaagaca 28786421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 52 - 397
Target Start/End: Original strand, 28792197 - 28792542
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||| ||| ||| ||||| |||||||||  | ||  ||||||||     
T  28792197 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 28792296  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  28792297 ttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 28792396  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| | ||       
T  28792397 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacatcaaa 28792496  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||| |||||||||||||| ||||| ||||| ||||||| ||||    
T  28792497 attttgcttggacgaacttgttcacattattcattgctacaagaca 28792542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 24 - 390
Target Start/End: Original strand, 26655751 - 26656125
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattct-------caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctct 115  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||||||||||| | ||||||| || |||||||||||| |||||||||| |||     
T  26655751 tcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctca 26655850  T
Q  116 tccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttg 215  Q
    ||| ||||| ||||||||| ||  ||||||||||| ||||||||||| || ||   |||||| ||| ||||||| ||||| ||||||||||||||| ||     
T  26655851 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26655950  T
Q  216 atgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttt 315  Q
     ||| ||||||||||| || ||||||||  |  |||| ||||  ||||| ||||||||||||||||||||  | |||||||||||||| || ||||||||    
T  26655951 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26656050  T
Q  316 tattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgcta 390  Q
    ||||||  | ||||||  || |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26656051 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgcta 26656125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 24 - 390
Target Start/End: Original strand, 26761722 - 26762096
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattct-------caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctct 115  Q
    ||||||||||||||||||| ||||||||||||||       ||||||||||||||||| | ||||||| || |||||||||||| |||||||||| |||     
T  26761722 tcacagaccacaaaaacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctca 26761821  T
Q  116 tccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttg 215  Q
    ||| ||||| ||||||||| ||  ||||||||||| ||||||||||| || ||   |||||| ||| ||||||| ||||| ||||||||||||||| ||     
T  26761822 tcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctctta 26761921  T
Q  216 atgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttt 315  Q
     ||| ||||||||||| || ||||||||  |  |||| ||||  ||||| ||||||||||||||||||||  | |||||||||||||| || ||||||||    
T  26761922 ttgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccaggatttt 26762021  T
Q  316 tattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgcta 390  Q
    ||||||  | ||||||  || |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  26762022 tattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgcta 26762096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 390
Target Start/End: Original strand, 26802191 - 26802578
Alignment:
Q  15 catcagacttcacagaccacaaaaactt-ctcattcatattct-------caaactctttttt----catctaatttctctaaaatctcatggctatgca 102  Q
    |||||| | ||||||||||||||||||| ||||||||||||||       |||||||||||||    |||| ||||||||  || | |||||||||||||    
T  26802191 catcagtcatcacagaccacaaaaacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgca 26802290  T
Q  103 atcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctc 202  Q
     || |||| ||| ||| ||||| |||| ||||  | ||  |||||||| ||||||||||| || ||   |||||||||||||||||| || || ||||||    
T  26802291 gtctccttcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctc 26802390  T
Q  203 tacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaag 302  Q
    ||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  26802391 tacaaggctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaag 26802490  T
Q  303 agtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgcta 390  Q
    | ||||| ||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||||||| ||||| ||||| |||||    
T  26802491 aatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgcta 26802578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 52 - 383
Target Start/End: Original strand, 26823644 - 26823969
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||| ||| || ||||||||| || ||||||||||||||| ||| ||| ||||||      | |||| ||||| | ||||||||||||     
T  26823644 attctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttcctcttc------agtttcatatgatttcaaataccaagtg 26823737  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    || |||||||| ||||| | |||||||||||| |  || ||||| ||||||||||||||| ||   ||||||||||||||||||||  ||||  ||| ||    
T  26823738 tttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacaccttttttgatgatcgtg 26823837  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    ||||||||||||||||| |||||  || ||||||    || |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||    
T  26823838 aacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttc 26823937  T
Q  352 attttgtttggacgaacttgtccacatcattc 383  Q
    ||||||||||||||||||||||||||||||||    
T  26823938 attttgtttggacgaacttgtccacatcattc 26823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 25579617 - 25579862
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||||||||||||  ||||||||||  ||  ||| ||||| |||||||| |||||| ||| |||||||||||| |  |||||| ||||  || |||    
T  25579617 ttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgataatg 25579716  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  25579717 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 25579816  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  25579817 attttgtttggacgaacttgtccacatcattcactgctacaagaca 25579862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 114 - 391
Target Start/End: Original strand, 26884023 - 26884302
Alignment:
Q  114 cttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttt 213  Q
    ||||| ||||| |||||||||  | ||  |||||||| |||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||| |    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  214 tgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatt 313  Q
    |  | |||||||||||||||||||||||||  || || | |||| ||||||    |||||||||||||||||  |||||||||||||||| ||||| |||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatt 26884222  T
Q  314 tttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccaca--tcattcactgctac 391  Q
    ||||||||  | ||||||| || |||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  26884223 tttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcattcactgctac 26884302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 171 - 397
Target Start/End: Original strand, 26646396 - 26646622
Alignment:
Q  171 gtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatga 270  Q
    ||||||||||  ||||||| || ||  |||||||||||||| ||  |||||||||||| ||||||||||||||  ||  ||| ||| | ||||| |||||    
T  26646396 gtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatga 26646495  T
Q  271 aatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaactt 370  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  26646496 aatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaactt 26646595  T
Q  371 gtccacatcattcactgctacaggaca 397  Q
    |||||||||||||| ||||||| ||||    
T  26646596 gtccacatcattcattgctacaagaca 26646622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 171 - 397
Target Start/End: Original strand, 26752364 - 26752590
Alignment:
Q  171 gtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatga 270  Q
    ||||||||||  ||||||| || ||  |||||||||||||| ||  |||||||||||| ||||||||||||||  ||  ||| ||| | ||||| |||||    
T  26752364 gtgacactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatga 26752463  T
Q  271 aatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaactt 370  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  26752464 aatcacaccatcactcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaactt 26752563  T
Q  371 gtccacatcattcactgctacaggaca 397  Q
    |||||||||||||| ||||||| ||||    
T  26752564 gtccacatcattcattgctacaagaca 26752590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 66 - 369
Target Start/End: Original strand, 27229044 - 27229347
Alignment:
Q  66 ttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcag 165  Q
    |||||||| ||||||||| || |||||||||||| |||||||||| ||||||| ||||| |||||| ||  | ||  |||||||| ||||| ||||| ||    
T  27229044 ttttcatccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttag 27229143  T
Q  166 aggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggg 265  Q
     ||   |||||||||| ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| |||||||||||     
T  27229144 gggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagagga 27229243  T
Q  266 gatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacg 365  Q
    || |||||||||||||||||  ||||||||||||| || ||| |||||||||||||  | ||||||  || |||||| |||||||||||||||||| |||    
T  27229244 gacgaaatcacaccatcactcgtcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacg 27229343  T
Q  366 aact 369  Q
    ||||    
T  27229344 aact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 26142763 - 26143008
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||||||||| ||  ||||||||||  ||   || ||||| |||||||| |||||| ||| |||||||||||| |  || ||||||||  || |||    
T  26142763 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgataatg 26142862  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||| ||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26142863 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26142962  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  26142963 attttgtttggacgaacttgtccacatcattcactgctacaagaca 26143008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 25481640 - 25481885
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||| |||||| ||  ||||||||||  ||  ||| ||||| |||||||| |||||| ||| |||||||||||| |  || ||||||||  |  |||    
T  25481640 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaaaatg 25481739  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||  | ||||||  || |||||| ||||||||    
T  25481740 atcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttc 25481839  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  25481840 attttgtttggacgaacttgtccacatcattcactgctacaagaca 25481885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 152 - 392
Target Start/End: Original strand, 26055824 - 26056064
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||| |||||| ||  ||||||||||  ||  ||| ||||| |||||||| |||||| ||| ||||||||||||  | || ||||||||  |  |||    
T  26055824 ttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26055923  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||||||  | ||||||  || |||||| ||||||||    
T  26055924 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttc 26056023  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26056024 attttgtttggacgaacttgtccacatcattcactgctaca 26056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 152 - 392
Target Start/End: Original strand, 26075794 - 26076034
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||| |||||| ||  ||||||||||  ||  ||| ||||| |||||||| |||||| ||| ||||||||||||  | || ||||||||  |  |||    
T  26075794 ttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaaaatg 26075893  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||| |||||||| |||||||||| ||||| ||| |||||||||||||  | ||||||  || |||||| ||||||||    
T  26075894 atcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttc 26075993  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26075994 attttgtttggacgaacttgtccacatcattcactgctaca 26076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 143 - 391
Target Start/End: Complemental strand, 27531495 - 27531247
Alignment:
Q  143 taccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattg 242  Q
    |||||||| ||||||||||| || || |  ||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | ||||||||||    
T  27531495 taccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctataccttcattg 27531396  T
Q  243 acaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgc 342  Q
    |  |  |||| ||||||||||| ||||||||||||||||||||    || ||||||||| | ||||||||||||||||| || ||||||   | ||||||    
T  27531395 atgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaaaactatgc 27531296  T
Q  343 ctcttcttcattttgtttggacgaacttgtccacatcattcactgctac 391  Q
     ||||||||||||||||||||||||||||| ||||||| ||| ||||||    
T  27531295 atcttcttcattttgtttggacgaacttgttcacatcactcattgctac 27531247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 382
Target Start/End: Original strand, 28234462 - 28234692
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| |||||  |||||||||| || ||||| ||||  |||||||| |  ||| ||  | |||||||||||||||||||||||||  |    |    
T  28234462 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 28234561  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | |||||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  28234562 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28234661  T
Q  352 attttgtttggacgaacttgtccacatcatt 382  Q
    |||||| ||||||||||||||||||||||||    
T  28234662 attttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 25538438 - 25538683
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||||||||| ||  ||||||||||  ||   || ||||| |||||||| |||||| ||| ||||||||||||    || ||||| ||  || |||    
T  25538438 ttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgataatg 25538537  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||| ||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||  | ||||||  || |||||| ||||||||    
T  25538538 atcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttc 25538637  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  25538638 attttgtttggacgaacttgtccagatcattcactgctacaagaca 25538683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 26048743 - 26048988
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||||||||| ||  ||||||||||  ||  ||| ||||| |||||||| |||||| |   ||||||||||||    || ||||||||  || |||    
T  26048743 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26048842  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||| ||||||| ||||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26048843 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26048942  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  26048943 attttgtttggacgaacttgtccacatcattcactgctacaagaca 26048988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 152 - 397
Target Start/End: Original strand, 26069912 - 26070157
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||||||||| ||  ||||||||||  ||  ||| ||||| |||||||| |||||| |   ||||||||||||    || ||||||||  || |||    
T  26069912 ttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgataatg 26070011  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||| ||||||| ||||||||||||||   |||| |||||||||| ||||| |||||||||||||||||  | ||||||  || |||||| ||||||||    
T  26070012 atcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttc 26070111  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  26070112 attttgtttggacgaacttgtccacatcattcactgctacaagaca 26070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 152 - 389
Target Start/End: Original strand, 28242702 - 28242939
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| |||||  |||||||||| || ||||| || || ||||||||||| | | ||  | | |||||||| | ||||||||||||  |    |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    |||||| | |||| ||  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  352 attttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||| |||||||||||||||||||||||||||||||    
T  28242902 attttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 28181114 - 28181249
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| || ||||| ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||  ||||| ||||||||||    
T  28181114 cttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28181213  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| |||||||||||||||||||||||||||||||    
T  28181214 tttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 228 - 389
Target Start/End: Original strand, 28149912 - 28150072
Alignment:
Q  228 tccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgtt 327  Q
    ||||||||||||||||  ||   || ||| || ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||  | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcact-ctcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  328 ttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
     ||||||| |||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgct 28150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 90 - 389
Target Start/End: Original strand, 28139377 - 28139676
Alignment:
Q  90 tcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggttt 189  Q
    |||||||| ||||| ||||||  ||||| |||||  | |||||||  | || |||| | || || ||||| ||||||||  |||||||||| | ||||||    
T  28139377 tcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggttt 28139476  T
Q  190 caccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctc 289  Q
    ||| || ||||||||||| ||| ||  ||||   ||||||||||| || |||||  ||   || |||||| |||| || |||||  |||| |||||  |     
T  28139477 cactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgta 28139576  T
Q  290 aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    || ||||||||||| ||||||||||| || ||||||||||| |||| ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  28139577 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgct 28139676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 28185366 - 28185501
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| || ||||| ||| |||||||| |||||||||||||||||||||||||||| ||||| || || |||||||  ||||| ||||||||||    
T  28185366 cttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcat 28185465  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| |||||||||||||||||||||||| ||||||    
T  28185466 tttgcttggacgaacttgtccacatcattaactgct 28185501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 28226950 - 28227085
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| |||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||  ||||| ||||||||||    
T  28226950 cttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 28227049  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| |||||||||||||||||||||||||| ||||    
T  28227050 tttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 269 - 389
Target Start/End: Complemental strand, 28297885 - 28297765
Alignment:
Q  269 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaac 368  Q
    ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||| ||  ||||| |||||||||||||| ||||||||||    
T  28297885 gaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaac 28297786  T
Q  369 ttgtccacatcattcactgct 389  Q
    |||||||||||||||||||||    
T  28297785 ttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 28514188 - 28514308
Alignment:
Q  269 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaac 368  Q
    ||||| |||||||||||| |||||  |||||||||| |||||||||| |||||||| || |||| ||  ||||| |||||||||||||| ||||||||||    
T  28514188 gaaataacaccatcacttttcaagcacattgaagagactaggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaac 28514287  T
Q  369 ttgtccacatcattcactgct 389  Q
    |||||||||||||||||||||    
T  28514288 ttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 28325481 - 28325616
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| || ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||  ||||| |||||||| |    
T  28325481 cttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttcct 28325580  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  28325581 tttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 26342105 - 26341986
Alignment:
Q  270 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaact 369  Q
    ||||||||| ||||||| |||| |||||||||||||| |||||||| |||||  | || || |||| |||||| |||||||| |||||||||||||||||    
T  26342105 aaatcacacaatcacttgtcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaact 26342006  T
Q  370 tgtccacatcattcactgct 389  Q
    ||||||||||||||| ||||    
T  26342005 tgtccacatcattcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 269 - 389
Target Start/End: Original strand, 26937109 - 26937229
Alignment:
Q  269 gaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaac 368  Q
    |||||||||||||||||| ||||||| |||||||| ||  |||||   || ||||| || ||||||| ||||||| ||||||||||||||||||||||||    
T  26937109 gaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctctatcaactatgccacttcttcattttgtttggacgaac 26937208  T
Q  369 ttgtccacatcattcactgct 389  Q
    ||||||||||| || ||||||    
T  26937209 ttgtccacatcgttgactgct 26937229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 254 - 383
Target Start/End: Original strand, 2184288 - 2184417
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||||| |||||| ||| |||||||| | || |||||||||||||| || ||||| || ||||| || || |  | |||||| ||||||||||    
T  2184288 cttcaacgagggggtgaaataacagcatcacttatgaaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcat 2184387  T
Q  354 tttgtttggacgaacttgtccacatcattc 383  Q
    ||||||||||||||||||||||||||||||    
T  2184388 tttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 385
Target Start/End: Complemental strand, 28098637 - 28098425
Alignment:
Q  173 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 272  Q
    ||||||||||| ||||| || || ||||||||||| ||| ||  ||||   ||| ||| ||||||||||||| || | || |||||   ||| |||  ||    
T  28098637 gacactcggtatggttttactggaaatctctacaaagctctttgtgacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaa 28098538  T
Q  273 tcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgt 372  Q
    |||||| ||| ||| |||||||||| |||||||| |||||||| ||||| || || ||||  | |||||| |||||||  ||||||||||| ||||||||    
T  28098537 tcacacaatcccttgtcaaggccatcgaagagtccaggattttaattccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgt 28098438  T
Q  373 ccacatcattcac 385  Q
    |||||||||||||    
T  28098437 ccacatcattcac 28098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 372
Target Start/End: Complemental strand, 25507092 - 25506978
Alignment:
Q  258 aaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttg 357  Q
    ||||||| |||||||||||||||||| |  |||  ||||||||||| ||||||||||||||||| ||  ||||||||| ||||||||||||   ||||||    
T  25507092 aaagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttg 25506993  T
Q  358 tttggacgaacttgt 372  Q
    |||||| ||||||||    
T  25506992 tttggaggaacttgt 25506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 186 - 389
Target Start/End: Original strand, 26848592 - 26848795
Alignment:
Q  186 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 285  Q
    ||||||| || |||||||| || ||| ||  |||||| |||||||  |||||||||||  |  | || ||||| || || ||||| |||||||| || ||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgct 26848691  T
Q  286 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 385  Q
     ||||||  ||||||||| || |||||||  |||| ||| || |||   | ||||||| ||||||| ||||||||||||||||||||||||||||||||     
T  26848692 cctcaagaacattgaagactcgaggatttccattcttgtattctctgagaactatgccacttcttcgttttgtttggacgaacttgtccacatcattcat 26848791  T
Q  386 tgct 389  Q
    ||||    
T  26848792 tgct 26848795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 173 - 384
Target Start/End: Original strand, 26974971 - 26975182
Alignment:
Q  173 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 272  Q
    |||||||| | |||||||||||| || ||||| || ||| ||  |||||| |||||| ||| |||||||||  |  | || ||| ||| |||||| ||||    
T  26974971 gacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaa 26975070  T
Q  273 tcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgt 372  Q
    ||||||| || || ||||||  ||||||||| || ||||||   |||   || || ||||    |||||| |||||||||||||||||||||||||||||    
T  26975071 tcacaccttcgctcctcaagagcattgaagactcgaggattaccattatcgtcttctctaaagactatgcttcttcttcattttgtttggacgaacttgt 26975170  T
Q  373 ccacatcattca 384  Q
    ||||||||||||    
T  26975171 ccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 383
Target Start/End: Original strand, 2184898 - 2185027
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||||| |||||| |||||||| ||| | || ||||||||||| || || ||||| || ||||| || || |    |||||| ||||||||||    
T  2184898 cttcaacgagggggtgaaataacaccatcgcttgtgaaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcat 2184997  T
Q  354 tttgtttggacgaacttgtccacatcattc 383  Q
    |||||||||||||||||||||| |||||||    
T  2184998 tttgtttggacgaacttgtccatatcattc 2185027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 27427751 - 27427655
Alignment:
Q  296 attgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||| || |||||||| |||||  | ||||||  || |||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 27427655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 382
Target Start/End: Complemental strand, 26893688 - 26893530
Alignment:
Q  224 ggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctg 323  Q
    ||||| ||||||||||||||  ||   || ||||| ||||| || |||||| ||||||||||| ||||||| ||||||||||||| ||| |  ||||| |    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaagagtctatgatatacattccag 26893589  T
Q  324 tgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcatt 382  Q
    |  | ||||||| |||||| ||||||  |||||||||||| ||||| ||| | ||||||    
T  26893588 tcctctctatcaactatgcttcttctatattttgtttggaagaactcgtcaaaatcatt 26893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 25071742 - 25071791
Alignment:
Q  337 ctatgcctcttcttcattttgtttggacgaacttgtccacatcattcact 386  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  25071742 ctatgcttcttcttcattttgtttagacgaacttgtccacatcattcact 25071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 389
Target Start/End: Original strand, 26635620 - 26635825
Alignment:
Q  184 cggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatca 283  Q
    |||||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||||||||| ||     
T  26635620 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26635719  T
Q  284 cttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattc 383  Q
    || ||||||  |||||||||||| ||||||   |||   || || ||||     ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  26635720 ctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattc 26635819  T
Q  384 actgct 389  Q
    | ||||    
T  26635820 attgct 26635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 389
Target Start/End: Original strand, 26741586 - 26741791
Alignment:
Q  184 cggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatca 283  Q
    |||||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||||||||| ||     
T  26741586 cggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcg 26741685  T
Q  284 cttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattc 383  Q
    || ||||||  |||||||||||| ||||||   |||   || || ||||     ||||| |||||||  ||||||||||| |||||||||||||||||||    
T  26741686 ctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttctttgttttgtttggatgaacttgtccacatcattc 26741785  T
Q  384 actgct 389  Q
    | ||||    
T  26741786 attgct 26741791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 173 - 386
Target Start/End: Original strand, 26949580 - 26949793
Alignment:
Q  173 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 272  Q
    |||||||| | |||||||||||| |||||||| || ||| |   ||||||||||||||  |||||||||||  || | || ||||| | ||| || ||||    
T  26949580 gacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaa 26949679  T
Q  273 tcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgt 372  Q
    ||||||| ||||| ||||||   |||||||| || || |||   |||   || |||||||     ||||| ||||||||||||||||| |||||||||||    
T  26949680 tcacaccttcactcctcaagagaattgaagaatcgagaattgccattatcgtcttttctaaggaatatgcttcttcttcattttgtttagacgaacttgt 26949779  T
Q  373 ccacatcattcact 386  Q
    ||| ||||||||||    
T  26949780 ccatatcattcact 26949793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 27593408 - 27593369
Alignment:
Q  19 agacttcacagaccacaaaaacttctcattcatattctca 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27593408 agacttcacagaccacaaaaacttctcattcatattctca 27593369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 27678002 - 27677963
Alignment:
Q  19 agacttcacagaccacaaaaacttctcattcatattctca 58  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27678002 agacttcacagaccacaaaaacttctcattcatattctca 27677963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 27427990 - 27427816
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||| |  ||||| |||||||| || ||||||||| ||||||| |||||||| |||| ||||| |||||||||  | ||  ||| | ||     
T  27427990 attctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtg 27427893  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 228  Q
    ||||||| ||  |  ||    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  27427892 ttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 27427816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 27214508 - 27214552
Alignment:
Q  345 cttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  27214508 cttcttcattttgtttggacgaacttgtccacatcactcattgct 27214552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 27234720 - 27234676
Alignment:
Q  345 cttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||    
T  27234720 cttcttcattttgtttggacgaacttgtccacatcactcattgct 27234676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 389
Target Start/End: Complemental strand, 27665373 - 27665169
Alignment:
Q  185 ggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcac 284  Q
    ||||||||||| || ||||| |||||| ||  |||||| ||||||||||||||||||||  |  | || |||| ||  || || ||||||||||| ||||    
T  27665373 ggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcac 27665274  T
Q  285 ttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattca 384  Q
    | |  |||  ||||||||| || ||||||   |||  | | || ||||  | ||||||  |||||||||||||||| || ||||||||||||||||||||    
T  27665273 tccggaagagcattgaagaatcgaggattgccattattatattctctaagaactatgctacttcttcattttgtttagatgaacttgtccacatcattca 27665174  T
Q  385 ctgct 389  Q
     ||||    
T  27665173 ttgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 384
Target Start/End: Original strand, 26959084 - 26959296
Alignment:
Q  173 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 272  Q
    |||||||| | | |||||||||| || ||||| || ||| ||  |||||| |||||| |||||||||||||  |  | || ||| ||| |||||||||||    
T  26959084 gacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaa 26959183  T
Q  273 tcacaccatcacttctc-aaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttg 371  Q
    ||||||| || |||||| |||  ||||||||| || ||||||   |||   || || ||||     ||||| |||||||| |||| |||||| |||||||    
T  26959184 tcacaccttcgcttctcaaagagcattgaagactcgaggattgccattatcgttttctctaaggaatatgcttcttcttcgttttatttggatgaacttg 26959283  T
Q  372 tccacatcattca 384  Q
    |||||||||||||    
T  26959284 tccacatcattca 26959296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 312
Target Start/End: Original strand, 29825925 - 29826085
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||||| ||| |  || ||||| |  ||||| ||||| ||||||||||| ||| |   |||||||  ||| | ||||||||||||  |  | |    
T  29825925 ttcctcagtttcacaggtgcagatactcgctttggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaag 29826024  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggat 312  Q
    | |||||||||||||| ||||||||||| |||||| | ||||| ||| |||| ||||||||    
T  29826025 agcttcaaagaggggacgaaatcacaccctcacttgtgaaggcaattcaagaatctaggat 29826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 25538375 - 25538429
Alignment:
Q  56 tcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctt 110  Q
    ||||| |||||||||||| || |||| | || |||||||||||||||||||||||    
T  25538375 tcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcacctt 25538429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 28481269 - 28481232
Alignment:
Q  266 gatgaaatcacaccatcacttctcaaggccattgaaga 303  Q
    |||||||||||||||||||||||||| || ||||||||    
T  28481269 gatgaaatcacaccatcacttctcaaagcaattgaaga 28481232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 303
Target Start/End: Complemental strand, 29733235 - 29733186
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaaga 303  Q
    ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29733235 cttcaaaaaggcgaagaaatcacaccatcacttctcaaagcaattgaaga 29733186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 303
Target Start/End: Complemental strand, 29793693 - 29793656
Alignment:
Q  266 gatgaaatcacaccatcacttctcaaggccattgaaga 303  Q
    |||||||||||||||||||||||||| || ||||||||    
T  29793693 gatgaaatcacaccatcacttctcaaagcaattgaaga 29793656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 183; Significance: 7e-99; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 3811 - 3465
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||||||||  |||||||| || | |||||||||| |||||||||| ||| ||| ||||| |||||||||  | ||  ||||||||     
T  3811 attctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 3712  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| || ||   |||||||||| ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  3711 ttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 3612  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatc-acctatgcctcttctt 350  Q
    | ||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3611 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttctt 3512  T
Q  351 cattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3511 cattttgtttggacgaacttgtccacatcattcactgctacaagaca 3465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 14743 - 14400
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||| ||||  |||||||| || |||||||||||| |||||||||| ||| ||||||||| |||||||||  | ||  ||||||||     
T  14743 attctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatggattcacttaccaagtg 14645  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||| ||||||| || ||   |||||||||| ||||||| ||||| ||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||    
T  14644 ttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 14545  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  14544 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttc 14446  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     |||||||||||||||||||||||||| ||||||||||||| ||||    
T  14445 gttttgtttggacgaacttgtccacataattcactgctacaagaca 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 8190 - 8080
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    ||||||||||||||||||||||  |||||||| || |||||||||||| |||||||||| ||| ||| ||||| | ||| |||  | ||  ||||||||     
T  8190 attctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatggattcacttaccaagtg 8091  T
Q  152 ttcctcagttt 162  Q
    |||||||||||    
T  8090 ttcctcagttt 8080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 24 - 397
Target Start/End: Original strand, 7294 - 7668
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccactt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||  ||||||| |||    
T  7294 tcacagaccacaaaaacttactcattcatattctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctctt 7393  T
Q  123 caatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaa 222  Q
    || |||| ||||  | ||  |||||||| ||||| ||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||    
T  7394 cattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaa 7493  T
Q  223 gggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcct 322  Q
    ||||||| | |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  7494 gggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcct 7593  T
Q  323 gtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||| ||| ||| ||||   |||||| |||||||||||||| ||||| ||||| ||||||| ||||    
T  7594 gtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagaca 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 162; Significance: 2e-86; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 5060 - 4715
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || ||| |||||||| |||||||||| ||| ||| ||||| |||||||||  | ||  ||||||||     
T  5060 attctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggattcacttaccaagtg 4961  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  4960 ttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 4861  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| ||||||||||||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||  |||||||| ||||||    
T  4860 atcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctaggatttttattcctgtgttttctatcttctatgccttttcttc 4761  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
     |||||||||||||||||||||||||| ||||||||||||| ||||    
T  4760 gttttgtttggacgaacttgtccacataattcactgctacaagaca 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 14021 - 13676
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||| ||||||| ||||| |||||| ||  | ||  ||||||||     
T  14021 attctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgcattcacttaccaagtg 13922  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||||||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||||||||| | |||||||||||  |  |||    
T  13921 ttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatg 13822  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| ||||       
T  13821 atcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaa 13722  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||| |||||||||||||| ||||| ||||| ||||||| ||||    
T  13721 attttgcttggacgaacttgttcacattattcattgctacaagaca 13676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 2e-86; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 18699776 - 18699431
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||| ||| ||||| ||||||||   | ||  ||||||||     
T  18699776 attctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18699677  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||| ||||| ||   |||||||||  ||||||| || ||  |||||||||| ||| ||  |||||||||||||||||||||||||||  | | ||    
T  18699676 ttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtg 18699577  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | || ||||| ||||||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  18699576 acctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttc 18699477  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||    
T  18699476 attttgtttggacgaacttgttcacatcattcactgctacaagaca 18699431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 18655853 - 18655508
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| | ||||||| || | ||||||||| ||||||||||| ||| ||| ||||| ||||||||   | ||  ||||||||     
T  18655853 attctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18655754  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||| ||||| ||  ||||||||||  ||||||| || ||| |||||||||| ||| ||  |||||||||||||||||||||||||||  | | ||    
T  18655753 ttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcattgatgaccgtg 18655654  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | || ||||| ||||||||||||| |||||||||   ||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18655653 agctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttc 18655554  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  18655553 attttgtttggacgaacttgtccgcatcattcactgctacaagaca 18655508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 18679943 - 18679598
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| | |||||||  | | ||||||||||||||||||||| ||| | | ||||| ||||||||   | ||  ||||||||     
T  18679943 attctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgattcacttaccaagtg 18679844  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||| ||||| ||  ||||||||||  ||||||| || ||  |||||||||||||| ||  |||||| ||||||||||||||||||||  | | ||    
T  18679843 ttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcattgatgaccgtg 18679744  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | || ||||||||||||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  18679743 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttc 18679644  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  18679643 attttgtttggacgaacttgtccacatcattcactgctacaagaca 18679598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 52 - 397
Target Start/End: Complemental strand, 18731880 - 18731535
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||||||||||| | |||||||  | | ||||||||||||||||||||| ||| ||| ||||| ||||||||   | ||  ||||||||     
T  18731880 attctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtg 18731781  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    |||||||| ||||| ||  ||||||||||  ||||||| || ||  |||||||||  ||| ||  |||||||||||||||||||||||||||  | | ||    
T  18731780 ttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcattgatgaccgtg 18731681  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | || ||||||||||||||||||| |||||||||   ||| |||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||    
T  18731680 acctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttc 18731581  T
Q  352 attttgtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  18731580 attttgtttggacgaacttgtccacatcatgcactgctacaagaca 18731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 88 - 397
Target Start/End: Complemental strand, 18724425 - 18724116
Alignment:
Q  88 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 187  Q
    ||||||||||||||||||||||| ||| ||| ||||| ||||||||   | ||  |||||||| |||||||| ||||| ||  ||||||||||  |||||    
T  18724425 tctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggt 18724326  T
Q  188 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 287  Q
    || || ||  |||||||||||||| ||  |||||||||||||||||||||||||||  | | ||| || ||||||||||||||||||| |||||||||      
T  18724325 tttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcg 18724226  T
Q  288 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 387  Q
     ||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  18724225 acaatgccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactg 18724126  T
Q  388 ctacaggaca 397  Q
    ||||| ||||    
T  18724125 ctacaagaca 18724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Complemental strand, 17989185 - 17989089
Alignment:
Q  296 attgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||| || |||||||| |||||  | ||||||  || |||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 17989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 18073804 - 18073900
Alignment:
Q  296 attgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||| || |||||||| |||||  | ||||||  || |||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 18073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 17989424 - 17989250
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||| |  ||||| |||||||| || ||||||||| ||||||| |||||||| |||| ||||| |||||||||  | ||  ||| | ||     
T  17989424 attctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtg 17989327  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 228  Q
    ||||||| ||  |  ||    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  17989326 ttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 17989250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 18073565 - 18073739
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||| |  ||||| |||||||| || ||||||||| ||||||| |||||||| |||| ||||| |||||||||  | ||  ||| | ||     
T  18073565 attctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtg 18073662  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 228  Q
    ||||||| ||  |  ||    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  18073663 ttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 18073739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 389
Target Start/End: Complemental strand, 5091125 - 5091006
Alignment:
Q  270 aaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaact 369  Q
    |||| ||||| |||||||||||||||||| |||| |||| |||| | |||   || || |||| |  |||||| |||||||| |||||||| || |||||    
T  5091125 aaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgttttgtttagatgaact 5091026  T
Q  370 tgtccacatcattcactgct 389  Q
    |||||| || ||||||||||    
T  5091025 tgtccatattattcactgct 5091006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 88 - 392
Target Start/End: Complemental strand, 268697 - 268393
Alignment:
Q  88 tctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggt 187  Q
    ||||||||||||||||||||||| ||||||| ||||||| || ||||  |     ||||| || |||||||  |||||||| |||||||||||  | |||    
T  268697 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtgacactcgtgagggt 268598  T
Q  188 ttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttc 287  Q
    || |  ||  |||||||||||||| ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||      
T  268597 tttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaaccatcactcg 268498  T
Q  288 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 387  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  268497 acaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 268398  T
Q  388 ctaca 392  Q
    |||||    
T  268397 ctaca 268393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 57 - 397
Target Start/End: Complemental strand, 28164733 - 28164393
Alignment:
Q  57 caaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcct 156  Q
    ||||||||||| ||||| ||||||| | || |||||||||||| | ||| | || ||||||| |||||||||||||||  | || ||||||||| |||||    
T  28164733 caaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttcct 28164634  T
Q  157 cagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaactt 256  Q
    |||||| || ||  ||||||||||  |||||||||| ||  ||||||| |||||  |||| ||||||||||| ||||| ||||||||  ||  ||| |||    
T  28164633 cagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatctt 28164534  T
Q  257 caaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcatttt 356  Q
     | ||||| || ||||||||||| ||| |  |||||||||||||| | ||| | ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  28164533 gagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttgaatttttattcctgtgttatctatcaactatgcctcttcttcatttt 28164434  T
Q  357 gtttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  28164433 gtttggacgaacttgtccacatcattcactgctacaagaca 28164393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 60 - 397
Target Start/End: Complemental strand, 28128042 - 28127710
Alignment:
Q  60 actcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcag 159  Q
    |||||||| ||||| ||||| | | || |||||||||||||||||||| || ||||||      |||||||||||  | || ||||||||| ||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctcttc------aatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  160 tttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaa 259  Q
     ||||| ||  ||||||||||  |||||||||| ||  |||||||||||||  || ||||||||||||||||||| ||||||||  ||  | | ||| |     
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgag 28127849  T
Q  260 agaggggatgaaa-tcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgt 358  Q
    ||||| ||  ||| ||||||| |||||| | |||||||||||||| ||||| |||||||||||||| ||||||| || ||||||||||||||||||||||    
T  28127848 agaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgt 28127749  T
Q  359 ttggacgaacttgtccacatcattcactgctacaggaca 397  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  28127748 ttggacgaacttgtgcacatcattcactgctacaagaca 28127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 158; Significance: 6e-84; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 24 - 348
Target Start/End: Complemental strand, 335 - 10
Alignment:
Q  24 tcacagaccacaaaaactt-ctcattcatattctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccactt 122  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||  ||||||| |||    
T  335 tcacagaccacaaaaacttactcattcatattctcaaactcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctctt 236  T
Q  123 caatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaa 222  Q
    || |||| ||||  | ||  |||||||| ||||| ||||| || ||   |||||||||  ||||||| ||||| ||||||||||||||| ||  ||||||    
T  235 cattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaa 136  T
Q  223 gggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcct 322  Q
    ||||||| | |||||||||||  |  |||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  135 gggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctaggatttttattcct 36  T
Q  323 gtgttttctatcacctatgcctcttc 348  Q
    ||||||||||||| ||| ||| ||||    
T  35 gtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 9e-83; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 86 - 397
Target Start/End: Complemental strand, 29274125 - 29273814
Alignment:
Q  86 aatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaggtgacactcggtacg 185  Q
    ||||||||||||||||||||||||| ||||||| ||||||| || ||||  | ||  ||||| || |||||||  || ||||| |||||||||||  |||    
T  29274125 aatctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacg 29274026  T
Q  186 gtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 285  Q
    |||| |  ||  ||||||||||| || ||  |||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| | |||||||    
T  29274025 gttttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcact 29273926  T
Q  286 tctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 385  Q
       ||| | ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29273925 cgacaatgtcattgaagagtctagaatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcac 29273826  T
Q  386 tgctacaggaca 397  Q
    ||||||| ||||    
T  29273825 tgctacaagaca 29273814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 313
Target Start/End: Original strand, 31903770 - 31903910
Alignment:
Q  173 gacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaa 272  Q
    |||||||| || ||||| || || ||||||||||| ||| || |||| ||||||||||||||||| |||||| || | ||||||||||||||  ||||||    
T  31903770 gacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacctttattgacgatgaagaacttcaaagaggacatgaaa 31903869  T
Q  273 tcacaccatcacttctcaaggccattgaagagtctaggatt 313  Q
    |||||||||||||| |  |||| ||||||||||||||||||    
T  31903870 tcacaccatcacttttagaggcaattgaagagtctaggatt 31903910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 102; Significance: 2e-50; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 152 - 389
Target Start/End: Original strand, 34623 - 34860
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| |||||  |||||||||| || ||||| ||||  |||||||| |  ||| ||  | |||||||||||||||||||||||||  |    |    
T  34623 ttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgacaggg 34722  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    | |||||| |||| |||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  34723 agcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 34822  T
Q  352 attttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||| |||||||||||||||||||||||||||||||    
T  34823 attttgcttggacgaacttgtccacatcattcactgct 34860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 152 - 389
Target Start/End: Original strand, 42864 - 43101
Alignment:
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatg 251  Q
    ||||| ||||| |||||  |||||||||| || ||||| || || ||||||||||| | | ||  | | |||||||| | ||||||||||||  |    |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  252 aacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttc 351  Q
    |||||| | |||| ||  |||| |||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||  ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  352 attttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||| |||||||||||||||||||||||||||||||    
T  43064 attttgcttggacgaacttgtccacatcattcactgct 43101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 27448 - 27583
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| |||||||| ||| |||||||| |||||| ||||||||| ||||||||||| |||||||| || |||||||  ||||| ||||||||||    
T  27448 cttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcat 27547  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| |||||||||||||||||||||||||| ||||    
T  27548 tttgcttggacgaacttgtccacatcattcattgct 27583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 389
Target Start/End: Original strand, 116796 - 116931
Alignment:
Q  254 cttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcat 353  Q
    |||||| |||| || ||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| | || |||||||  ||||| |||||||| |    
T  116796 cttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttcct 116895  T
Q  354 tttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||| ||||| |||||||||||||| ||||||||||    
T  116896 tttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 171 - 389
Target Start/End: Complemental strand, 58552 - 58334
Alignment:
Q  171 gtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatga 270  Q
    |||||||||| || ||||| || || ||||||||||  ||| ||  ||||||||||||||  |||||||| ||  |    || |||||| |||| || ||    
T  58552 gtgacactcgctatggttttactggaaatctctacagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacga 58453  T
Q  271 aatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaactt 370  Q
    ||| |||||||||||| ||||||||||| |||||||||||||||| ||||| || || ||||||| |||||| |||||||||||||| ||| ||||||||    
T  58452 aataacaccatcacttttcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaactt 58353  T
Q  371 gtccacatcattcactgct 389  Q
    |||||||||||||||||||    
T  58352 gtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 261 - 389
Target Start/End: Original strand, 3279695 - 3279823
Alignment:
Q  261 gaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgttt 360  Q
    |||| ||||||||||||| ||||||| |||||||||| |||||||| | |||||||||||| || || ||||||| |||||| ||||||  |||||||||    
T  3279695 gaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgttt 3279794  T
Q  361 ggacgaacttgtccacatcattcactgct 389  Q
    |||||||||||||||||||||||| ||||    
T  3279795 ggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 17993788 - 17993736
Alignment:
Q  337 ctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgct 389  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  17993788 ctatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 392
Target Start/End: Original strand, 59612 - 59708
Alignment:
Q  296 attgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 392  Q
    |||||||| || |||||||| |||||  | ||||||  || |||||| |||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 59708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 59373 - 59547
Alignment:
Q  52 attctcaaactcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagta 151  Q
    |||||||||||||| |  ||||| |||||||| || ||||||||| ||||||| |||||||| |||| ||||| |||||||||  | ||  ||| | ||     
T  59373 attctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgcattcagttacgatgtg 59470  T
Q  152 ttcctcagtttcagaggaggtgacactcggtacggtttcaccgggaatctctacaaggcttttgatgacaagggaat 228  Q
    ||||||| ||  |  ||    ||||||||||||||||||||||| |||||||  |||||| ||  ||||||||||||    
T  59471 ttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaat 59547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 382
Target Start/End: Original strand, 16689008 - 16689139
Alignment:
Q  251 gaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttctt 350  Q
    |||||||| ||||| ||  ||||||||||||||||| ||||||| |||||||| || ||||||   || || ||||||||||  | |||||| | ||| |    
T  16689008 gaacttcagagaggtgacaaaatcacaccatcacttatcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcct 16689107  T
Q  351 cattttgtttggacgaacttgtccacatcatt 382  Q
    | ||||||||||| ||||||||| ||||||||    
T  16689108 cgttttgtttggatgaacttgtcaacatcatt 16689139  T

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