View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1248_high_2 (Length: 474)
Name: NF1248_high_2
Description: NF1248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1248_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 10 - 315
Target Start/End: Original strand, 2064466 - 2064771
Alignment:
| Q |
10 |
ataatactcaaacgatccaattgaataagaccttgaatcgccaccggtagtaacggcgtcgggattgggaagattgtttccacggcggcttatatttccg |
109 |
Q |
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| T |
2064466 |
ataatactcaaacgatccaatcgaataagaccttgaatcgccaccggtagtaacggcgtcgggattgggaagattgtttccacggcggcttatatttccg |
2064565 |
T |
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| Q |
110 |
atatcaactcggaaactgtctgaagaagttgatcggagaattttcgcgagatcagaatcggaagggagaatgctggagcgacataacggacatgaaagat |
209 |
Q |
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| T |
2064566 |
atatcaactcggaaactgtctgaagaagttgatcggagaatttttgcgagatcagaatcggaagggagaatgctggcgcgacataacggacatgaaagat |
2064665 |
T |
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| Q |
210 |
ttgaacggagccatgtgtcaatgcattcagcatggaaagcgtggcaacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagac |
309 |
Q |
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| T |
2064666 |
ttgaacggagccatgtgtcaatgcattcagcatggaaagcgtggcaacagagaggaagagaacggaggaggtcggagttacggaactttgataaacagac |
2064765 |
T |
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| Q |
310 |
agcgca |
315 |
Q |
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|||||| |
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| T |
2064766 |
agcgca |
2064771 |
T |
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