View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1248_low_21 (Length: 254)

Name: NF1248_low_21
Description: NF1248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1248_low_21
NF1248_low_21
[»] chr4 (8 HSPs)
chr4 (13-212)||(9603823-9604022)
chr4 (71-147)||(30441368-30441444)
chr4 (107-170)||(782390-782453)
chr4 (70-170)||(7257305-7257405)
chr4 (69-124)||(10156765-10156820)
chr4 (114-170)||(3664230-3664286)
chr4 (108-170)||(55301174-55301235)
chr4 (71-103)||(55052133-55052165)
[»] chr5 (11 HSPs)
chr5 (68-170)||(35323597-35323699)
chr5 (71-170)||(21039236-21039335)
chr5 (67-166)||(31859712-31859811)
chr5 (69-155)||(17223062-17223148)
chr5 (68-147)||(13271486-13271565)
chr5 (97-171)||(18401235-18401310)
chr5 (70-168)||(14872588-14872686)
chr5 (94-147)||(8217125-8217178)
chr5 (114-155)||(28503275-28503315)
chr5 (71-103)||(4064241-4064273)
chr5 (104-168)||(38290772-38290836)
[»] chr8 (9 HSPs)
chr8 (94-166)||(44173167-44173239)
chr8 (93-170)||(9045697-9045774)
chr8 (68-170)||(27157688-27157790)
chr8 (68-158)||(39039698-39039788)
chr8 (94-147)||(39555878-39555931)
chr8 (76-155)||(37507539-37507617)
chr8 (100-155)||(40899651-40899706)
chr8 (107-155)||(7632687-7632735)
chr8 (94-170)||(7685450-7685525)
[»] chr6 (12 HSPs)
chr6 (70-212)||(7591053-7591196)
chr6 (88-170)||(989501-989583)
chr6 (71-170)||(6978498-6978598)
chr6 (85-169)||(33450815-33450900)
chr6 (74-157)||(20207190-20207273)
chr6 (74-157)||(22101213-22101296)
chr6 (68-170)||(30522093-30522195)
chr6 (97-154)||(13214195-13214252)
chr6 (68-155)||(29389192-29389278)
chr6 (67-158)||(32826710-32826801)
chr6 (76-132)||(9540583-9540639)
chr6 (107-155)||(33148312-33148360)
[»] chr7 (6 HSPs)
chr7 (70-168)||(40256804-40256902)
chr7 (69-158)||(44453593-44453682)
chr7 (68-170)||(2391578-2391680)
chr7 (69-155)||(22713451-22713536)
chr7 (81-147)||(31459414-31459480)
chr7 (94-155)||(3255158-3255219)
[»] chr3 (9 HSPs)
chr3 (68-157)||(7925337-7925426)
chr3 (76-170)||(25123224-25123318)
chr3 (70-167)||(33513396-33513492)
chr3 (70-170)||(36692887-36692987)
chr3 (70-158)||(23771674-23771764)
chr3 (72-138)||(26665523-26665589)
chr3 (115-170)||(36679272-36679327)
chr3 (96-170)||(32808564-32808638)
chr3 (102-170)||(14338928-14338994)
[»] chr1 (6 HSPs)
chr1 (70-158)||(7439097-7439185)
chr1 (76-158)||(31577996-31578077)
chr1 (68-170)||(31767924-31768027)
chr1 (67-155)||(38091249-38091337)
chr1 (85-162)||(32556519-32556596)
chr1 (68-155)||(51906955-51907044)
[»] chr2 (8 HSPs)
chr2 (69-168)||(37267707-37267806)
chr2 (70-170)||(5867900-5867999)
chr2 (73-169)||(24166791-24166887)
chr2 (84-170)||(10696366-10696452)
chr2 (105-169)||(45203216-45203280)
chr2 (104-155)||(13378426-13378477)
chr2 (70-155)||(43050109-43050193)
chr2 (76-124)||(25314700-25314748)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 13 - 212
Target Start/End: Complemental strand, 9604022 - 9603823
Alignment:
Q  13 aatattgtcgatataagattttgtactctttcattgatagtcatccatgaaattagccattatttttcccaccctatgaccttctcgcgcgtcctattca 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9604022 aatattgtcgatataagattttgtactctttcattgatagtcatccatgaaattagccattatttttcccaccctatgaccttctcgcgcgtcctattca 9603923  T
Q  113 gattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgctaaaatctgaactacatagacgcttgagaaactaataggatg 212  Q
     ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  9603922 aattctaaaatctgaaatattttaacgtatttttggaggttttatggggtttttattctaaaatccgaactacatagacgcttgagaaactcataggatg 9603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 30441368 - 30441444
Alignment:
Q  71 attatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttg 147  Q
    |||| |||||||||||||||| ||||||| ||  |||||| ||||||||||||| | || |||||||||||||||||    
T  30441368 attacttttcccaccctatgagcttctcgtgcaccctatttagattctaaaatccgaaacatttcaacgtatttttg 30441444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 782453 - 782390
Alignment:
Q  107 tattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||| |||||||||||| | ||||||||||| | ||||||||| |||||||||||||||||||    
T  782453 tattcggattctaaaatccgaaatatttcaacttttttttggagattttatgaggtttttatgc 782390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 7257405 - 7257305
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||| |||| |||||||||||  |||||||  | |||||||  |||||||||||    |||||||||| | |||||||||||||||||||| |||||||    
T  7257405 cattactttttccaccctatgaggttctcgcatgccctattcgtattctaaaatccaagatatttcaacatgtttttggaggttttatgaggattttatg 7257306  T
Q  170 c 170  Q
    |    
T  7257305 c 7257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 10156765 - 10156820
Alignment:
Q  69 ccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatc 124  Q
    |||||||||||||||  |||||| ||||||||||  ||||||||||||||||||||    
T  10156765 ccattatttttcccattctatgagcttctcgcgcaccctattcagattctaaaatc 10156820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 3664230 - 3664286
Alignment:
Q  114 attctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||||||| | ||||||| ||||| |||||| |||||||||||| |||||||||    
T  3664230 attctaaaatccgaaatattttaacgtgtttttgtaggttttatgagatttttatgc 3664286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 55301235 - 55301174
Alignment:
Q  108 attcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    |||||||||||||||||   ||||||||||||| ||||| ||| ||||||||| |||||||||    
T  55301235 attcagattctaaaatcca-aatatttcaacgtgtttttagagattttatgagatttttatgc 55301174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 55052133 - 55052165
Alignment:
Q  71 attatttttcccaccctatgaccttctcgcgcg 103  Q
    |||||||||||||||||||||||||||| ||||    
T  55052133 attatttttcccaccctatgaccttctcccgcg 55052165  T

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Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 35323597 - 35323699
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttta 167  Q
    ||||||| |||||||||| |||||  |||||| |||||||||||||||||||||||| | |||||||||||||||||||| ||||||||   ||||||||    
T  35323597 gccattacttttcccaccttatgagattctcgtgcgtcctattcagattctaaaatccgaaatatttcaacgtatttttgaaggttttacagggttttta 35323696  T
Q  168 tgc 170  Q
    |||    
T  35323697 tgc 35323699  T

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Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 21039236 - 21039335
Alignment:
Q  71 attatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||||||||||||||  |  |||||| |||||||||||||||| ||||||| | ||||||||   || | |||||||||||| ||||||||||||||    
T  21039236 attatttttcccaccctacaagtttctcgtgcgtcctattcagattttaaaatccgaaatatttctttgtgtgtttggaggttttttgaggtttttatgc 21039335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 31859712 - 31859811
Alignment:
Q  67 agccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttt 166  Q
    |||||||| |||| ||| | ||||| ||||||| ||| ||||||| || ||||||||| | |||||| |||| ||||||||||| ||||||| |||||||    
T  31859712 agccattacttttgccatcttatgagcttctcgtgcgccctattcggactctaaaatccgaaatattccaacttatttttggagattttatggggttttt 31859811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 17223062 - 17223148
Alignment:
Q  69 ccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||||| ||||||||||  ||||  ||||| |||| | |||| ||||||||||||||| ||||||||||||| |||||| |||||||    
T  17223062 ccattacttttcccacctgatgagtttctcacgcgccttatttagattctaaaatctgaaatatttcaacgtgtttttgcaggtttt 17223148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 13271565 - 13271486
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttg 147  Q
    ||||||| |||| ||||| ||| |  |||||||||||||||||   ||||||||||||| ||||||||||||| ||||||    
T  13271565 gccattactttttccaccatattagtttctcgcgcgtcctatttgaattctaaaatctgaaatatttcaacgtgtttttg 13271486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 171
Target Start/End: Original strand, 18401235 - 18401310
Alignment:
Q  97 tcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggt-tttatgaggtttttatgct 171  Q
    ||||| || ||||||||||| || |||||| ||| ||||||||| ||||||||||| | |||||||| ||||||||    
T  18401235 tcgcgtgttctattcagattatagaatctgaaatgtttcaacgtgtttttggaggtctgtatgaggtgtttatgct 18401310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 14872588 - 14872686
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttat 168  Q
    ||||| |||||||||||||| |  |||||| |||  || || | |||||||||||   ||||||||||||| ||||| ||||||||||  |||||||||    
T  14872588 cattacttttcccaccctattaggttctcgtgcgctctgtttaaattctaaaatccaaaatatttcaacgtgtttttagaggttttatagggtttttat 14872686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 8217125 - 8217178
Alignment:
Q  94 ttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttg 147  Q
    |||||||||| |||||||| ||||||||||||| ||| ||| ||||| ||||||    
T  8217125 ttctcgcgcgccctattcaaattctaaaatctgaaatgttttaacgtgtttttg 8217178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 28503315 - 28503275
Alignment:
Q  114 attctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||||||||||| |||||||||||||| |||||||||||||    
T  28503315 attctaaaatctgaaatatttcaacgta-ttttggaggtttt 28503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 4064241 - 4064273
Alignment:
Q  71 attatttttcccaccctatgaccttctcgcgcg 103  Q
    |||||||||||||||||||||||||||| ||||    
T  4064241 attatttttcccaccctatgaccttctcccgcg 4064273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Original strand, 38290772 - 38290836
Alignment:
Q  104 tcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttat 168  Q
    ||||| || |||||||||||  | || |||||||| | ||||||||||||||||| |||||||||    
T  38290772 tcctactcggattctaaaattagaaagatttcaacatgtttttggaggttttatggggtttttat 38290836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 44173167 - 44173239
Alignment:
Q  94 ttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttt 166  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||| ||||||    
T  44173167 ttctcgcgcgccctattcagattctaaaatcagaaatatttcaacgtatttttggagattttatgaagttttt 44173239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 9045774 - 9045697
Alignment:
Q  93 cttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||| || |||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  9045774 cttcttgcacgtcctattcagatttaaaaatctgaaatatttcaacgtgtttttggaggttttatggagtttttatgc 9045697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 27157790 - 27157688
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttta 167  Q
    ||||||| |||| |||||||||||  |||||| |||| |||||| |||||||||||| | | |||||||||||  |||||||| ||||||| ||| ||||    
T  27157790 gccattactttttccaccctatgagtttctcgtgcgtgctattcggattctaaaatccgaattatttcaacgtggttttggagattttatggggtattta 27157691  T
Q  168 tgc 170  Q
    |||    
T  27157690 tgc 27157688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 158
Target Start/End: Original strand, 39039698 - 39039788
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatg 158  Q
    ||||||||||||  || ||||| | ||||| |||||||||||| ||||||||||||| | || |||||||||| ||||| || ||||||||    
T  39039698 gccattatttttttcatcctataagcttcttgcgcgtcctatttagattctaaaatccgaaacatttcaacgtgtttttagaagttttatg 39039788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 39555878 - 39555931
Alignment:
Q  94 ttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttg 147  Q
    |||||||||||||| |||||||| ||||||||| ||| ||||||||| ||||||    
T  39555878 ttctcgcgcgtcctgttcagattttaaaatctgaaatgtttcaacgtgtttttg 39555931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 37507539 - 37507617
Alignment:
Q  76 ttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||||||||||||||  |||| ||||| |||||||  ||||||||||| | ||| |||||||||  |||||||||||||    
T  37507539 ttttcccaccctatgagtttcttgcgcgccctattcgaattctaaaatccgaaatgtttcaacgt-gttttggaggtttt 37507617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 40899651 - 40899706
Alignment:
Q  100 cgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||| |||||||||||| ||||||||| ||||||| ||||| |||||| |||||||    
T  40899651 cgcgccctattcagattttaaaatctgaaatattttaacgtgtttttgaaggtttt 40899706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Original strand, 7632687 - 7632735
Alignment:
Q  107 tattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||||| ||| |||||| || |||||||||||||||||||| |||||||    
T  7632687 tattcaaattttaaaatttgaaatatttcaacgtatttttgaaggtttt 7632735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 170
Target Start/End: Original strand, 7685450 - 7685525
Alignment:
Q  94 ttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||| | ||||||| | ||| ||||||||| |||||||||||||| ||||| | ||||||||  ||||||||||    
T  7685450 ttctcgcacatcctatttaaattttaaaatctgaaatatttcaacgta-ttttgaaagttttatggagtttttatgc 7685525  T

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Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 7591053 - 7591196
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||| |||||||| |||||||  ||| ||||||||||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||  |||   ||     
T  7591053 cattacttttcccatcctatgaatttcccgcgcgtcctattaagattctaaaatccgaaatatttcaacgtgttttttgaggttttatgcagttcggatt 7591152  T
Q  170 ctaaaatctgaactacata-gacgcttgagaaactaataggatg 212  Q
    ||||||||  |||| |||| |||||||||||| || ||||||||    
T  7591153 ctaaaatccaaactgcataggacgcttgagaagctcataggatg 7591196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 989501 - 989583
Alignment:
Q  88 atgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    |||| |||||||| || |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| || ||||||||    
T  989501 atgagcttctcgcacgccctattcagaatctaaaatctgaaatatttcaacgtgtttttggagattttatgggggttttatgc 989583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 170
Target Start/End: Complemental strand, 6978598 - 6978498
Alignment:
Q  71 attatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgt-atttttggaggttttatgaggtttttatg 169  Q
    |||| |||| ||| |||||||  |||||| ||||||||||  |||||||||||||  ||||||||||||| ||||||||||||||||||  |||||||||    
T  6978598 attactttttccatcctatgagtttctcgtgcgtcctatttggattctaaaatctaaaatatttcaacgtaatttttggaggttttatggagtttttatg 6978499  T
Q  170 c 170  Q
    |    
T  6978498 c 6978498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 169
Target Start/End: Original strand, 33450815 - 33450900
Alignment:
Q  85 cctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggagg-ttttatgaggtttttatg 169  Q
    ||||||| ||||| ||||||||||||| |||||||||||  | ||||||||||||| |||||||||| ||||| ||||| ||||||    
T  33450815 cctatgagcttcttgcgcgtcctattcggattctaaaattcgaaatatttcaacgtgtttttggaggcttttaggaggtgtttatg 33450900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 20207273 - 20207190
Alignment:
Q  74 atttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttat 157  Q
    ||||||| ||| ||||||   ||||||  |||||||||||||||||||||||| ||||||||||||| |||||| || ||||||    
T  20207273 atttttctcactctatgaatatctcgcatgtcctattcagattctaaaatctgaaatatttcaacgtgtttttgaagtttttat 20207190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 157
Target Start/End: Complemental strand, 22101296 - 22101213
Alignment:
Q  74 atttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttat 157  Q
    ||||||| ||| ||||||   ||||||  |||||||||||||||||||||||| ||||||||||||| |||||| || ||||||    
T  22101296 atttttctcactctatgaatatctcgcatgtcctattcagattctaaaatctgaaatatttcaacgtgtttttgaagtttttat 22101213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 30522195 - 30522093
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttta 167  Q
    ||||||| |||||||||| |||||  |||| | | | ||||||| ||||| |||||| | ||| |||  |||| ||||||||||||||||||||||||||    
T  30522195 gccattacttttcccaccttatgaggttcttgtgtgccctattcggattccaaaatccgaaatgtttttacgtgtttttggaggttttatgaggttttta 30522096  T
Q  168 tgc 170  Q
    |||    
T  30522095 tgc 30522093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 13214252 - 13214195
Alignment:
Q  97 tcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttt 154  Q
    |||||| ||||||||||||| ||||||| | ||||||||||||| ||||| |||||||    
T  13214252 tcgcgcatcctattcagattttaaaatccgaaatatttcaacgtgtttttagaggttt 13214195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 29389278 - 29389192
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||||| |||| ||||||||| |  ||||||| || |||||||||||| ||||||| | ||| ||||||||| |||||| |||||||    
T  29389278 gccattactttttccaccctataat-ttctcgcacgccctattcagattttaaaatccgaaatgtttcaacgtgtttttgaaggtttt 29389192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 158
Target Start/End: Complemental strand, 32826801 - 32826710
Alignment:
Q  67 agccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatg 158  Q
    |||||||| |||| |||  ||||||  ||||||||||| |||||   |||||||||| |  ||||||||||||  |||||||||||||||||    
T  32826801 agccattactttttccattctatgagtttctcgcgcgttctatttgaattctaaaattttaaatatttcaacgagtttttggaggttttatg 32826710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 9540639 - 9540583
Alignment:
Q  76 ttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatat 132  Q
    ||||| || |||||||  ||||| |||| |||||||||||||||||||||| |||||    
T  9540639 ttttctcatcctatgagtttctcacgcgccctattcagattctaaaatctgaaatat 9540583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 33148360 - 33148312
Alignment:
Q  107 tattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||| ||||||||||  || ||||||||||||| ||||||||||||||    
T  33148360 tattcggattctaaaaattgaaatatttcaacgtgtttttggaggtttt 33148312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 40256804 - 40256902
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttat 168  Q
    ||||||||||| ||||||||||  || ||||||| | ||||| |||| ||||||||| |||||| |||||| ||||||||||||||||| |||||||||    
T  40256804 cattatttttctcaccctatgagtttttcgcgcgccttattcggattttaaaatctgaaatattgcaacgtgtttttggaggttttatgtggtttttat 40256902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 44453593 - 44453682
Alignment:
Q  69 ccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatg 158  Q
    |||||| ||||  |||||||| |  ||||||  |||||||||| |||||||||||  | ||||||||||||| |||||||| ||||||||    
T  44453593 ccattacttttttcaccctataagtttctcgtacgtcctattcggattctaaaattcgaaatatttcaacgtgtttttggaagttttatg 44453682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 2391578 - 2391680
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttta 167  Q
    ||||||| ||||  || |||||||  ||||||||||  |||||  |||||||||||| | ||||||||||| |||||||  |||| || || ||||||||    
T  2391578 gccattacttttttcatcctatgagtttctcgcgcgcactatttggattctaaaatccgaaatatttcaacatattttttaaggtcttgtggggttttta 2391677  T
Q  168 tgc 170  Q
    |||    
T  2391678 tgc 2391680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 22713536 - 22713451
Alignment:
Q  69 ccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||||| |||| ||||| |||||  |||||| ||| ||||||   ||| ||||||||| ||||||||||||| ||||||||||||||    
T  22713536 ccattactttttccaccttatgagtttctcgtgcg-cctatttgaattttaaaatctgaaatatttcaacgtgtttttggaggtttt 22713451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 31459414 - 31459480
Alignment:
Q  81 ccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttg 147  Q
    ||||||||| |  |||||| | |||||||||| ||| ||||||| | ||||||||||||||||||||    
T  31459414 ccaccctataagtttctcgtgtgtcctattcaaattttaaaatccgaaatatttcaacgtatttttg 31459480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 3255219 - 3255158
Alignment:
Q  94 ttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||||||||  |||||| |||||||||||||  ||||||||||  |||||||| |||||||    
T  3255219 ttctcgcgcgctctattcggattctaaaatctaaaatatttcaatatatttttgaaggtttt 3255158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 7925337 - 7925426
Alignment:
Q  68 gccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttat 157  Q
    ||||||| |||| |||||||||||  ||||| || |||||||| ||||||||||||||| |||||||||||||||||||  |||||||||    
T  7925337 gccattactttttccaccctatgaatttctcacgtgtcctatttagattctaaaatctgaaatatttcaacgtattttttaaggttttat 7925426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 25123224 - 25123318
Alignment:
Q  76 ttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    |||| ||||| |||||  || ||||||| ||||||||||||||||||||   ||||||| ||||  ||||||||||||||||  |||||||||||    
T  25123224 tttttccaccatatgagtttttcgcgcgccctattcagattctaaaatccaaaatattttaacgcgtttttggaggttttatagggtttttatgc 25123318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 33513492 - 33513396
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttta 167  Q
    |||||||||| |||||||||||  |||| | ||  ||||||| ||||||||||||   ||||||||||||| |||| |||||||||||| ||||||||    
T  33513492 cattattttttccaccctatgagtttcttgtgcaccctattcggattctaaaatcctaaatatttcaacgtgttttcggaggttttatg-ggttttta 33513396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 170
Target Start/End: Complemental strand, 36692987 - 36692887
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||| ||||| || | ||||| |||||||||||  |||||    |||||||||||| |||||||||| ||||||||| || ||||| ||||||||||||    
T  36692987 cattacttttctcatcatatgagcttctcgcgcgctctatttgagttctaaaatctgaaatatttcaatgtatttttgaagtttttacgaggtttttatg 36692888  T
Q  170 c 170  Q
    |    
T  36692887 c 36692887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 23771674 - 23771764
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaac--gtatttttggaggttttatg 158  Q
    ||||| ||||| |||||||||| ||| |||||||  |||||  |||||||||||||  |||||||||||  || |||||||||||||||||    
T  23771674 cattacttttcgcaccctatgagcttatcgcgcgctctatttggattctaaaatcttaaatatttcaacatgtttttttggaggttttatg 23771764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 26665589 - 26665523
Alignment:
Q  72 ttatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaac 138  Q
    |||||||||||| |||||||  |||||||||||||||||  |||| ||||||| | |||||||||||    
T  26665589 ttatttttcccatcctatgagtttctcgcgcgtcctatttggattttaaaatccgaaatatttcaac 26665523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 36679327 - 36679272
Alignment:
Q  115 ttctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    |||||||||||| |||||||||| || |||||| || ||||| |||||||||||||    
T  36679327 ttctaaaatctgaaatatttcaatgtttttttgaagtttttacgaggtttttatgc 36679272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 170
Target Start/End: Original strand, 32808564 - 32808638
Alignment:
Q  96 ctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||||| |||||| |||| |||||||   ||| ||| ||  ||||||||||||||||||||| |||||||||    
T  32808564 ctcgcgcgttctattcggattttaaaatccaaaattttttaatttatttttggaggttttatgagatttttatgc 32808638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 14338928 - 14338994
Alignment:
Q  102 cgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||||||||||||| |||||   ||||||||||||| ||||  |||||||||| |||| |||||||    
T  14338928 cgtcctattcagattcttaaatccaaaatatttcaacgtgtttt--gaggttttataaggtatttatgc 14338994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 7439185 - 7439097
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatg 158  Q
    ||||| ||||| || |||||||  ||||||||||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||||||    
T  7439185 cattacttttctcatcctatgagattctcgcgcgtcctattcaaattctaaaatctaaaatatttcaacgtgtttttgaaggttttatg 7439097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 31578077 - 31577996
Alignment:
Q  76 ttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatg 158  Q
    |||||||||| ||||| ||||||||||| ||||||  |||||||||||| | ||||||||||||| |||||||||||||||||    
T  31578077 ttttcccacc-tatgagcttctcgcgcgccctatttggattctaaaatccgaaatatttcaacgtgtttttggaggttttatg 31577996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 170
Target Start/End: Complemental strand, 31768027 - 31767924
Alignment:
Q  68 gccattatttttcccaccc-tatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggttttt 166  Q
    ||||||| ||||||||||| ||||  |||||| |||| ||||||  |||| ||||||| | ||||||||||||| |||||| | ||||||||||||||||    
T  31768027 gccattacttttcccacccctatgcgcttctcacgcgccctatttggattttaaaatccgaaatatttcaacgtgtttttgaaagttttatgaggttttt 31767928  T
Q  167 atgc 170  Q
    ||||    
T  31767927 atgc 31767924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 38091337 - 38091249
Alignment:
Q  67 agccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||||||| ||||| || ||| |||| ||||||||||||||||||||||||||||||  | ||||||||| ||| || ||| |||||||    
T  38091337 agccattacttttcacatcctgtgacgttctcgcgcgtcctattcagattctaaaattcgaaatatttcaccgtgttattgaaggtttt 38091249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 32556596 - 32556519
Alignment:
Q  85 cctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt-atgaggt 162  Q
    |||||||  ||||||| |||||||||| |||| ||||||||| ||||||  |||||||||| ||||||||| |||||||    
T  32556596 cctatgagtttctcgcacgtcctattcggattttaaaatctgaaatattgtaacgtatttt-ggaggtttttatgaggt 32556519  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 51907044 - 51906955
Alignment:
Q  68 gccattatttttcccaccctatgaccttctc-gcgcgtcctattcagattctaaaatctggaatatttcaacgt-atttttggaggtttt 155  Q
    ||||||| ||||||||||| |||| |||||| || || ||| || ||||||||||||| | ||||||||||| |  ||||||||||||||    
T  51907044 gccattacttttcccacccgatgagcttctcagcacgccctgtttagattctaaaatccgaaatatttcaacatgttttttggaggtttt 51906955  T

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Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 37267707 - 37267806
Alignment:
Q  69 ccattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttat 168  Q
    |||||| |||| ||||| ||||| ||||||| | | ||||||  |||||||||||| | ||||||| ||||| |||| |||||||||||||| |||||||    
T  37267707 ccattactttttccaccttatgagcttctcgtgtgccctatttggattctaaaatccgaaatattttaacgtgttttgggaggttttatgagatttttat 37267806  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 5867900 - 5867999
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||| |||| || |||||| | ||||||||| |  |||||| |||| ||||||||| ||||||||||||| ||||||||| ||||||| || |||||||    
T  5867900 cattactttttccgccctataagcttctcgcgtgctctattc-gattttaaaatctgaaatatttcaacgtgtttttggagattttatgtgggttttatg 5867998  T

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Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 169
Target Start/End: Original strand, 24166791 - 24166887
Alignment:
Q  73 tatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||||| |||||||||||  ||||| |||| ||||||| |||||| ||||  | ||||||||||| | ||||| |||||||||||  |||||||||    
T  24166791 tattttttccaccctatgagtttctcacgcgccctattcggattcttaaattcgaaatatttcaacatgtttttagaggttttatggagtttttatg 24166887  T

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Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 10696452 - 10696366
Alignment:
Q  84 ccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatgc 170  Q
    ||||||||  |||||||||   ||||||  |||||||||||   |||||||||||||||||||| |||||||| | |||||||||||    
T  10696452 ccctatgaagttctcgcgcactctattcgaattctaaaatccaaaatatttcaacgtatttttgaaggttttacggggtttttatgc 10696366  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 45203216 - 45203280
Alignment:
Q  105 cctattcagattctaaaatctggaatatttcaacgtatttttggaggttttatgaggtttttatg 169  Q
    ||||||| |||||||||||| | |||||||||| || ||||| ||||||||||| | ||||||||    
T  45203216 cctattcggattctaaaatccgaaatatttcaatgtgtttttcgaggttttatgggatttttatg 45203280  T

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Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 155
Target Start/End: Complemental strand, 13378477 - 13378426
Alignment:
Q  104 tcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    |||||||| |||| ||||||||| |||||||||| || ||||||||||||||    
T  13378477 tcctattcggattataaaatctgaaatatttcaatgtgtttttggaggtttt 13378426  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 43050109 - 43050193
Alignment:
Q  70 cattatttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatctggaatatttcaacgtatttttggaggtttt 155  Q
    ||||| ||||||||||||||||  |||| || || | ||||| |||| ||||||||| ||| |||||||||  |||||||||||||    
T  43050109 cattacttttcccaccctatgagtttcttgcacgccttattcggattttaaaatctgaaatgtttcaacgt-gttttggaggtttt 43050193  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 25314700 - 25314748
Alignment:
Q  76 ttttcccaccctatgaccttctcgcgcgtcctattcagattctaaaatc 124  Q
    ||||||||||||||||  ||||||| || ||||||| ||||||||||||    
T  25314700 ttttcccaccctatgagtttctcgcacgccctattcggattctaaaatc 25314748  T

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