View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12492_high_32 (Length: 230)
Name: NF12492_high_32
Description: NF12492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12492_high_32 |
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Alignment Details
Target: chr2 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 36957013 - 36956849
Alignment:
| Q |
23 |
acgttggtttgtattagttcacttccccaatgcaaccgacacaatcaacttaactaattattttatttaggcgctaaaatatataatacataccgccacc |
122 |
Q |
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| T |
36957013 |
acgttggtttgtattagttcacttccccaatgcaaccgacacaatcaacttaactaatttttttatttaggcgctaaaatatataatacataccgccacc |
36956914 |
T |
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| Q |
123 |
tcctctccattaccctctaattccaatattctactaaaaatatattttttgactggtttagtattt |
188 |
Q |
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| T |
36956913 |
tcctctccattaccctctaattccaatattctact-aaattttttttttttactggtttagtattt |
36956849 |
T |
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