View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12492_low_23 (Length: 327)
Name: NF12492_low_23
Description: NF12492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12492_low_23 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 63 - 306
Target Start/End: Original strand, 1061719 - 1061964
Alignment:
| Q |
63 |
gtcatgaagaccactaaatttaattctaaagtttgacaaaatgaaaccctacgaagttgttggaatttgtggttcatcttttgctgaatttccctctatt |
162 |
Q |
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| T |
1061719 |
gtcatgaggaccactaattttaattctaaagtttgacaaaataaaaccctacgaagttgttggaatttgtggttcatcttttgctgaatttccctctatt |
1061818 |
T |
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| Q |
163 |
tctatcatacctacccacataaatttactaacattttaaaccatatttc--atcaaaataaactaacattgtcactttcccaattgccaccaactaacaa |
260 |
Q |
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| T |
1061819 |
tctatcatacctacccacataaatttactaacattttaaaccatatttcatatcaagataaactaacattgtcactttgccaattgccaccaactaacaa |
1061918 |
T |
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| Q |
261 |
ttttgttttattttaatcctcttgcatatgtttccatattattatt |
306 |
Q |
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| T |
1061919 |
ttttgttttattttaatcatcttgcatatgtttccatattattatt |
1061964 |
T |
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