View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12495_low_7 (Length: 246)
Name: NF12495_low_7
Description: NF12495
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12495_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 228
Target Start/End: Original strand, 32914973 - 32915190
Alignment:
| Q |
11 |
cacagaacagcccttaagcactgcctatacaattgatcctatgtactccatcactgcataccgaagcctcaaaaccatccagctagaactgtgcatctgt |
110 |
Q |
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| T |
32914973 |
cacagaacagcccttaagcactgcctatacaattgatcctatgtacttcatcactgcataccgaagcctcaaaaccatccagctagaactgtgcatctgt |
32915072 |
T |
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| Q |
111 |
aatatgcgctcctaaaaactcacagccggtacacaagcccaaaagcaccgccagttacttcacgtgagaagaaaatctcgacagactcaccagtactgtc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32915073 |
aatatgcgctcctaaaaactcacagccggtacacaagcccaaaagcaccgccagttacttcacgtgagaagaaaatctcgacagactcaccagtactgtc |
32915172 |
T |
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| Q |
211 |
actacaccccaattagct |
228 |
Q |
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|||||||||||||||||| |
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| T |
32915173 |
actacaccccaattagct |
32915190 |
T |
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