View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12498_high_2 (Length: 432)

Name: NF12498_high_2
Description: NF12498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12498_high_2
NF12498_high_2
[»] chr1 (40 HSPs)
chr1 (235-423)||(26059925-26060120)
chr1 (17-172)||(26061168-26061321)
chr1 (255-338)||(26059750-26059833)
chr1 (167-231)||(34086947-34087011)
chr1 (167-210)||(1918027-1918070)
chr1 (167-210)||(2479162-2479205)
chr1 (167-210)||(13121674-13121717)
chr1 (167-210)||(17046731-17046774)
chr1 (167-210)||(26843753-26843796)
chr1 (167-210)||(29586160-29586203)
chr1 (167-210)||(31150515-31150558)
chr1 (167-210)||(33561985-33562028)
chr1 (167-210)||(36838785-36838828)
chr1 (167-210)||(39826602-39826645)
chr1 (167-210)||(42064407-42064450)
chr1 (168-210)||(30721715-30721757)
chr1 (168-206)||(52703202-52703240)
chr1 (167-208)||(7781254-7781295)
chr1 (173-210)||(36301200-36301237)
chr1 (168-209)||(49220564-49220605)
chr1 (167-208)||(50351036-50351077)
chr1 (168-208)||(3270663-3270703)
chr1 (168-212)||(9770062-9770106)
chr1 (175-231)||(21516766-21516822)
chr1 (168-208)||(46369809-46369849)
chr1 (167-210)||(2497924-2497967)
chr1 (167-210)||(17499975-17500018)
chr1 (167-210)||(19898998-19899041)
chr1 (167-210)||(26204276-26204319)
chr1 (173-208)||(38967559-38967594)
chr1 (167-210)||(44909842-44909885)
chr1 (167-210)||(47134621-47134664)
chr1 (168-210)||(7711045-7711087)
chr1 (167-209)||(29374333-29374375)
chr1 (167-208)||(322869-322910)
chr1 (173-202)||(1507840-1507869)
chr1 (167-228)||(44719061-44719122)
chr1 (168-208)||(6814050-6814090)
chr1 (173-209)||(18347511-18347547)
chr1 (194-230)||(49240391-49240427)
[»] chr2 (40 HSPs)
chr2 (167-233)||(10393137-10393203)
chr2 (167-235)||(40869461-40869529)
chr2 (173-231)||(13761754-13761812)
chr2 (168-230)||(41877705-41877767)
chr2 (194-236)||(43285599-43285641)
chr2 (167-210)||(2546426-2546469)
chr2 (167-210)||(3377388-3377431)
chr2 (167-210)||(4453625-4453668)
chr2 (167-210)||(5039771-5039814)
chr2 (167-210)||(9886988-9887031)
chr2 (167-210)||(13111845-13111888)
chr2 (167-210)||(15521475-15521518)
chr2 (167-210)||(16486878-16486921)
chr2 (167-210)||(28382782-28382825)
chr2 (167-210)||(36712638-36712681)
chr2 (167-210)||(38579110-38579153)
chr2 (168-210)||(21865242-21865284)
chr2 (167-231)||(23357086-23357151)
chr2 (167-208)||(43507664-43507705)
chr2 (176-208)||(22375955-22375987)
chr2 (167-207)||(31616488-31616528)
chr2 (167-202)||(650882-650917)
chr2 (167-202)||(4385627-4385662)
chr2 (177-208)||(5520180-5520211)
chr2 (167-210)||(8689064-8689107)
chr2 (167-210)||(8815209-8815252)
chr2 (167-210)||(10839682-10839725)
chr2 (167-210)||(13528006-13528049)
chr2 (167-210)||(18212116-18212159)
chr2 (167-210)||(18710186-18710229)
chr2 (167-210)||(36999485-36999528)
chr2 (175-210)||(37356164-37356199)
chr2 (167-210)||(40025044-40025087)
chr2 (167-210)||(41322752-41322795)
chr2 (168-210)||(2266255-2266297)
chr2 (167-201)||(39167756-39167790)
chr2 (173-202)||(6153556-6153585)
chr2 (194-235)||(7400513-7400554)
chr2 (167-208)||(17263855-17263896)
chr2 (167-208)||(24402154-24402195)
[»] chr5 (41 HSPs)
chr5 (168-238)||(11063005-11063075)
chr5 (173-234)||(26699208-26699269)
chr5 (173-234)||(26968941-26969002)
chr5 (173-237)||(5382045-5382109)
chr5 (168-235)||(22977322-22977389)
chr5 (167-210)||(1711299-1711342)
chr5 (168-210)||(9587284-9587326)
chr5 (167-210)||(2671412-2671455)
chr5 (167-210)||(4221569-4221612)
chr5 (167-210)||(5591586-5591629)
chr5 (167-210)||(12713310-12713353)
chr5 (167-210)||(12774574-12774617)
chr5 (167-210)||(14647453-14647496)
chr5 (167-210)||(24793970-24794013)
chr5 (167-210)||(30299696-30299739)
chr5 (167-210)||(30412708-30412751)
chr5 (167-210)||(39744638-39744681)
chr5 (168-210)||(2236613-2236655)
chr5 (167-213)||(5997990-5998036)
chr5 (173-231)||(16474748-16474806)
chr5 (167-208)||(11100858-11100899)
chr5 (173-210)||(13228574-13228611)
chr5 (167-208)||(39246932-39246973)
chr5 (167-210)||(6604006-6604049)
chr5 (167-210)||(8024080-8024123)
chr5 (167-210)||(19956403-19956446)
chr5 (167-210)||(32382847-32382890)
chr5 (167-210)||(36685814-36685857)
chr5 (167-210)||(39275421-39275464)
chr5 (168-202)||(12363710-12363744)
chr5 (168-210)||(32381771-32381813)
chr5 (167-201)||(43402451-43402485)
chr5 (194-231)||(648515-648552)
chr5 (168-201)||(4657679-4657712)
chr5 (168-201)||(5521305-5521338)
chr5 (168-201)||(15530442-15530475)
chr5 (173-210)||(29392208-29392245)
chr5 (176-208)||(19347705-19347737)
chr5 (168-208)||(27130333-27130373)
chr5 (168-208)||(35235824-35235864)
chr5 (173-209)||(41826395-41826431)
[»] chr6 (26 HSPs)
chr6 (168-237)||(19178296-19178365)
chr6 (168-231)||(11015567-11015630)
chr6 (167-230)||(33453714-33453777)
chr6 (168-231)||(34439660-34439723)
chr6 (167-208)||(3108112-3108153)
chr6 (175-210)||(1806428-1806463)
chr6 (167-210)||(2442423-2442466)
chr6 (167-210)||(31100120-31100163)
chr6 (167-210)||(31452059-31452102)
chr6 (167-210)||(32731757-32731800)
chr6 (167-210)||(34233020-34233063)
chr6 (167-210)||(34903958-34904001)
chr6 (167-229)||(2970654-2970716)
chr6 (167-209)||(29823141-29823183)
chr6 (167-208)||(10856133-10856174)
chr6 (167-208)||(34685120-34685161)
chr6 (168-208)||(558360-558400)
chr6 (167-231)||(28076400-28076464)
chr6 (167-202)||(12297371-12297406)
chr6 (167-202)||(20804996-20805031)
chr6 (167-202)||(29415016-29415051)
chr6 (167-210)||(30811254-30811297)
chr6 (176-210)||(14227649-14227683)
chr6 (168-201)||(3832388-3832421)
chr6 (168-201)||(12432727-12432760)
chr6 (168-201)||(33540832-33540865)
[»] chr7 (26 HSPs)
chr7 (173-229)||(28425730-28425786)
chr7 (175-231)||(23029767-23029823)
chr7 (167-210)||(10312142-10312185)
chr7 (167-210)||(36246489-36246532)
chr7 (167-210)||(42587496-42587539)
chr7 (167-210)||(43254102-43254145)
chr7 (167-210)||(45687029-45687072)
chr7 (167-210)||(47471075-47471118)
chr7 (168-210)||(40637274-40637316)
chr7 (168-210)||(42375896-42375938)
chr7 (167-208)||(1342777-1342818)
chr7 (167-208)||(27089769-27089810)
chr7 (167-208)||(27188491-27188532)
chr7 (168-208)||(31511301-31511341)
chr7 (168-208)||(35587580-35587620)
chr7 (167-210)||(9487406-9487449)
chr7 (167-210)||(21254810-21254853)
chr7 (167-202)||(32168840-32168875)
chr7 (168-210)||(21374632-21374674)
chr7 (168-202)||(21741978-21742012)
chr7 (167-209)||(27655786-27655828)
chr7 (167-201)||(27869675-27869709)
chr7 (173-210)||(36436153-36436190)
chr7 (173-210)||(43134404-43134441)
chr7 (167-208)||(45222186-45222227)
chr7 (167-208)||(48832166-48832207)
[»] chr3 (45 HSPs)
chr3 (167-227)||(30814360-30814420)
chr3 (167-230)||(42217642-42217705)
chr3 (201-238)||(2851802-2851839)
chr3 (167-208)||(5505852-5505893)
chr3 (194-235)||(24628329-24628370)
chr3 (167-231)||(52595444-52595508)
chr3 (173-208)||(193398-193433)
chr3 (167-210)||(8872872-8872915)
chr3 (167-210)||(16127249-16127292)
chr3 (167-210)||(25570378-25570421)
chr3 (167-210)||(26540959-26541002)
chr3 (167-210)||(29081391-29081434)
chr3 (167-210)||(37088283-37088326)
chr3 (167-210)||(38185769-38185812)
chr3 (167-210)||(40480131-40480174)
chr3 (167-210)||(40563473-40563516)
chr3 (167-210)||(44545229-44545272)
chr3 (167-210)||(44845623-44845666)
chr3 (167-210)||(45345118-45345161)
chr3 (173-231)||(2187312-2187370)
chr3 (168-210)||(35499600-35499642)
chr3 (167-205)||(39719358-39719396)
chr3 (167-213)||(52225281-52225327)
chr3 (167-208)||(44947311-44947352)
chr3 (167-208)||(52788677-52788718)
chr3 (167-208)||(52794896-52794937)
chr3 (167-208)||(54542045-54542086)
chr3 (167-208)||(55305219-55305260)
chr3 (175-231)||(31558316-31558372)
chr3 (168-208)||(48942992-48943032)
chr3 (167-210)||(19948428-19948471)
chr3 (167-210)||(28677000-28677043)
chr3 (167-202)||(37528833-37528868)
chr3 (167-210)||(38892096-38892139)
chr3 (167-210)||(41785808-41785851)
chr3 (167-202)||(46248074-46248109)
chr3 (172-202)||(24536804-24536834)
chr3 (167-209)||(37490034-37490076)
chr3 (167-209)||(45368610-45368652)
chr3 (168-202)||(46627609-46627643)
chr3 (167-208)||(37714075-37714116)
chr3 (175-208)||(39469914-39469947)
chr3 (182-215)||(39719301-39719334)
chr3 (167-208)||(43525744-43525785)
chr3 (167-208)||(53779032-53779073)
[»] scaffold0009 (1 HSPs)
scaffold0009 (167-231)||(191990-192054)
[»] chr8 (34 HSPs)
chr8 (167-231)||(39677353-39677417)
chr8 (175-231)||(3511195-3511251)
chr8 (167-210)||(17081652-17081695)
chr8 (167-210)||(25023304-25023347)
chr8 (167-210)||(31478074-31478117)
chr8 (167-210)||(31581692-31581735)
chr8 (167-210)||(32541221-32541264)
chr8 (167-210)||(43276876-43276919)
chr8 (167-210)||(45141560-45141603)
chr8 (167-228)||(3427726-3427787)
chr8 (167-208)||(27781102-27781143)
chr8 (173-210)||(39871263-39871300)
chr8 (167-215)||(29189831-29189879)
chr8 (167-210)||(11741198-11741241)
chr8 (167-210)||(17115536-17115579)
chr8 (167-210)||(28709305-28709348)
chr8 (167-210)||(28716662-28716705)
chr8 (167-202)||(36681552-36681587)
chr8 (167-210)||(38171532-38171575)
chr8 (173-208)||(41694020-41694055)
chr8 (167-202)||(44827422-44827457)
chr8 (176-210)||(1893956-1893990)
chr8 (176-210)||(6338316-6338350)
chr8 (168-202)||(11298147-11298181)
chr8 (176-210)||(23676869-23676903)
chr8 (167-201)||(31688155-31688189)
chr8 (168-202)||(32099542-32099576)
chr8 (168-210)||(34395454-34395496)
chr8 (168-210)||(42142841-42142883)
chr8 (168-201)||(40551814-40551847)
chr8 (167-208)||(41313375-41313416)
chr8 (167-199)||(8270915-8270947)
chr8 (167-199)||(22878030-22878062)
chr8 (174-202)||(39702312-39702340)
[»] chr4 (49 HSPs)
chr4 (167-210)||(17715579-17715622)
chr4 (167-210)||(7706367-7706410)
chr4 (167-210)||(9043717-9043760)
chr4 (167-210)||(11600678-11600721)
chr4 (167-210)||(18582839-18582882)
chr4 (167-210)||(22038463-22038506)
chr4 (167-210)||(28307250-28307293)
chr4 (167-210)||(35777492-35777535)
chr4 (167-210)||(39087664-39087707)
chr4 (167-210)||(42116891-42116934)
chr4 (167-210)||(45780843-45780886)
chr4 (167-210)||(46895278-46895321)
chr4 (167-210)||(47417581-47417624)
chr4 (167-210)||(53273113-53273156)
chr4 (167-210)||(53407184-53407227)
chr4 (167-210)||(55495986-55496029)
chr4 (167-210)||(56372430-56372473)
chr4 (167-209)||(21633922-21633964)
chr4 (167-208)||(11152045-11152086)
chr4 (167-208)||(27397872-27397913)
chr4 (167-208)||(29413528-29413569)
chr4 (167-208)||(29663926-29663967)
chr4 (167-208)||(33005234-33005275)
chr4 (167-231)||(4391814-4391878)
chr4 (168-208)||(35190723-35190763)
chr4 (168-208)||(36008112-36008152)
chr4 (194-230)||(37831904-37831940)
chr4 (167-210)||(4517297-4517340)
chr4 (167-202)||(8829921-8829956)
chr4 (167-210)||(12234073-12234116)
chr4 (167-210)||(19513988-19514031)
chr4 (167-210)||(25199402-25199445)
chr4 (167-202)||(31678972-31679007)
chr4 (167-210)||(37115389-37115432)
chr4 (167-202)||(45906142-45906177)
chr4 (167-201)||(30562954-30562988)
chr4 (168-210)||(35822406-35822448)
chr4 (168-202)||(37831925-37831959)
chr4 (168-210)||(52669989-52670031)
chr4 (167-208)||(3009708-3009749)
chr4 (167-208)||(4939491-4939532)
chr4 (167-208)||(23867975-23868016)
chr4 (167-208)||(55684692-55684733)
chr4 (173-201)||(6902235-6902263)
chr4 (167-199)||(8941910-8941942)
chr4 (176-208)||(24954316-24954348)
chr4 (174-202)||(29656806-29656834)
chr4 (168-208)||(35468012-35468052)
chr4 (173-205)||(36196874-36196906)
[»] scaffold0343 (1 HSPs)
scaffold0343 (168-228)||(9210-9270)
[»] scaffold0166 (1 HSPs)
scaffold0166 (167-210)||(36353-36396)
[»] scaffold0116 (1 HSPs)
scaffold0116 (167-210)||(22593-22636)
[»] scaffold0031 (1 HSPs)
scaffold0031 (167-210)||(126865-126908)
[»] scaffold0027 (1 HSPs)
scaffold0027 (167-210)||(41850-41893)
[»] scaffold0075 (1 HSPs)
scaffold0075 (173-210)||(27246-27283)
[»] scaffold0197 (1 HSPs)
scaffold0197 (167-202)||(28190-28225)
[»] scaffold0122 (1 HSPs)
scaffold0122 (167-210)||(12822-12865)
[»] scaffold0016 (1 HSPs)
scaffold0016 (168-213)||(84250-84295)
[»] scaffold0012 (1 HSPs)
scaffold0012 (168-201)||(50400-50433)


Alignment Details
Target: chr1 (Bit Score: 146; Significance: 9e-77; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 235 - 423
Target Start/End: Complemental strand, 26060120 - 26059925
Alignment:
Q  235 cttaaagtacaacatgctaaagaatctcacatctgatagaacttgaccatacaatatgtttatataagtgggagtcaatcatcatcttaattacaagtta 334  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26060120 cttaaagtacaacatgctaaagagtctcacatctgataggacttgaccatacaatatgtttatataagtgggagtcaatcatcatcttaattacaagtta 26060021  T
Q  335 gttttgtaggattgtgttagacccaactataattttttaaatagtatcataatcaaa-------ttcatttaattacctgctattcgatttcatct 423  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||       ||||||||||||||||||||  ||||||||||    
T  26060020 gttttgtaggattgtgttaggcccaactataatttttaaaatagtatcataatcaaattcaaaattcatttaattacctgctatctgatttcatct 26059925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 26061168 - 26061321
Alignment:
Q  17 atatacaattagaaatgcaaatcgtatgcatatatcaaaagttctattttgatgtagatgtgtagtattaaaattgttcaattacaaaagaattctaact 116  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26061168 atatacaattagaaatgcaaat--tatgcatatatcaaaagttctattttgatgtagatgtgtagtattaaaattgttcaattacaaaagaattctaact 26061265  T
Q  117 gaagaaataatattgggagtgtgggacagtgaccagcttatctttgatacctttta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26061266 gaagaaataatattgggagtgtgggacagtgaccagcttatctttgatacctttta 26061321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 26059750 - 26059833
Alignment:
Q  255 agaatctcacatctgatagaacttgaccatacaatatgtttatataagtgggagtcaatcatcatcttaattacaagttagttt 338  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26059750 agaatctcacatctgataggacttgaccatacaatatgtttatataagtgggagtcaatcatcatgttaattacaagttagttt 26059833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 34087011 - 34086947
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||||||    
T  34087011 ctttttttgtcagacgagcttataagctataagctataagctcattgacatgtcttaccaaacag 34086947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 1918070 - 1918027
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  1918070 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 1918027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 2479205 - 2479162
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  2479205 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 2479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 13121674 - 13121717
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  13121674 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 13121717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17046774 - 17046731
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  17046774 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 17046731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 26843796 - 26843753
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  26843796 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 26843753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 29586203 - 29586160
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  29586203 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 29586160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 31150515 - 31150558
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  31150515 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 31150558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 33561985 - 33562028
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  33561985 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 33562028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 36838785 - 36838828
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  36838785 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 36838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 39826645 - 39826602
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  39826645 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 39826602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 42064407 - 42064450
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  42064407 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 42064450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 30721715 - 30721757
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  30721715 tttttttgtcaaacgagcttataagctataagctaaaagctaa 30721757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 52703202 - 52703240
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataag 206  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  52703202 tttttttgtcaaacgagcttataagctataagctataag 52703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 7781254 - 7781295
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  7781254 ctttttttatcaaacgagcttataagctataagctataagct 7781295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 36301200 - 36301237
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||||||||||||| |||||||    
T  36301200 ttgtcaaacgagcttataagctataagctaaaagctaa 36301237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 49220564 - 49220605
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  49220564 tttttttgtcaaacgagcttataagctataagctaaaagcta 49220605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 50351077 - 50351036
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  50351077 ctttttttgtcaaacgagcttataagctataagctaaaagct 50351036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 3270703 - 3270663
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  3270703 tttttttgtcaaacgagcttataagctataagctaaaagct 3270663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 9770062 - 9770106
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatt 212  Q
    |||| ||||||||| |||||||||||||| |||||||||||||||    
T  9770062 tttttttgtcaaacaagcttataagctatgagctataagctaatt 9770106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 21516766 - 21516822
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||| ||||||||||||||||||||| ||||||| |  || ||||||||||||||||    
T  21516766 gtcatacgagcttataagctataagccataagctcaaatatgtgtcttaccaaacag 21516822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 46369849 - 46369809
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  46369849 tttttttgtcaaacgagcttataagctataagctaaaagct 46369809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 2497967 - 2497924
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||    
T  2497967 ctttttttgtcaaacgagcttataaactataagctaaaagctaa 2497924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 17499975 - 17500018
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  17499975 ctttttttgtcaaacgagcttataagctataaactaaaagctaa 17500018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 19898998 - 19899041
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  19898998 ctttttttgtcaaacgaacttataagctataagctaaaagctaa 19899041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 26204319 - 26204276
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  26204319 ctttttttatcaaacgagcttataagctataagctaaaagctaa 26204276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 38967559 - 38967594
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagct 208  Q
    |||||||||||||||||||||||||||||| |||||    
T  38967559 ttgtcaaacgagcttataagctataagctaaaagct 38967594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 44909885 - 44909842
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  44909885 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 44909842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 47134621 - 47134664
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  47134621 ctttttttgtcaaacgagcttataagctataaggtaaaagctaa 47134664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 7711045 - 7711087
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||| |||||||||||||||||| |||||||    
T  7711045 tttttttgtcaaacgaacttataagctataagctaaaagctaa 7711087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 29374375 - 29374333
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| || |||||||||||||||||||| |||||||||||||    
T  29374375 ctttttttatcaaacgagcttataagctaaaagctataagcta 29374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 322910 - 322869
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||| |||||||||||||||||||| |||||    
T  322910 ctttttttgtcaaacaagcttataagctataagctaaaagct 322869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 1507840 - 1507869
Alignment:
Q  173 ttgtcaaacgagcttataagctataagcta 202  Q
    ||||||||||||||||||||||||||||||    
T  1507840 ttgtcaaacgagcttataagctataagcta 1507869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 44719061 - 44719122
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaa 228  Q
    ||||| ||| ||||| ||||||||||||||||||||| |||| ||||  | |||||||||||    
T  44719061 ctttttttgccaaacaagcttataagctataagctatgagctcatttttgggtcttaccaaa 44719122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 6814090 - 6814050
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| ||||||||||||||||||||||||  ||||||||||    
T  6814090 tttttttgtcaaacgagcttataagctatccgctataagct 6814050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 18347511 - 18347547
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||||||| | |||||||||||||||||||||||||    
T  18347511 ttgtcaaacaaacttataagctataagctataagcta 18347547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 49240391 - 49240427
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaaca 230  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  49240391 tataagctataagctcattgaggtgtcttaccaaaca 49240427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 10393137 - 10393203
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtg 233  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10393137 ctttttttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtg 10393203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 40869461 - 40869529
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgcc 235  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  40869461 ctttttttgtcaaatgagcttataaactataagctataagctaatttaggtgtcttaccaatcagtgcc 40869529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 13761812 - 13761754
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||  | ||||||||||||    
T  13761812 ttgtcaaacgagcttataagctataagctataagctcatttagtgggcttaccaaacag 13761754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 41877767 - 41877705
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaaca 230  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||  | |||||||||||    
T  41877767 tttttttgtcaaacgaacttataagctataagctataagctcatttagtggacttaccaaaca 41877705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 43285641 - 43285599
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaacagtgcct 236  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  43285641 tataagctataagttaatttaggtgtcttaccaaacagtgcct 43285599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 2546426 - 2546469
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  2546426 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 2546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 3377431 - 3377388
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  3377431 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 3377388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 4453625 - 4453668
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  4453625 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 4453668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 5039814 - 5039771
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  5039814 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 5039771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 9887031 - 9886988
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  9887031 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 9886988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 13111845 - 13111888
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  13111845 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 13111888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 15521518 - 15521475
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  15521518 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 15521475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 16486921 - 16486878
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  16486921 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 16486878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 28382782 - 28382825
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  28382782 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 28382825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 36712638 - 36712681
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  36712638 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 36712681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 38579110 - 38579153
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  38579110 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 38579153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 21865284 - 21865242
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  21865284 tttttttgtcaaacgagcttataagctataagctaaaagctaa 21865242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 23357086 - 23357151
Alignment:
Q  167 cttttattgtcaaacgagcttataag-ctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||   | ||||||||||||    
T  23357086 ctttttttgtcaaacgagcttataagcctataagctataagctcatttaatgggcttaccaaacag 23357151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 43507664 - 43507705
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  43507664 ctttttttgtcaaacgagcttataagctataagctaaaagct 43507705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 22375987 - 22375955
Alignment:
Q  176 tcaaacgagcttataagctataagctataagct 208  Q
    |||||||||||||||||||||||||||||||||    
T  22375987 tcaaacgagcttataagctataagctataagct 22375955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 31616488 - 31616528
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagc 207  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  31616488 ctttttttgtcaaacgagcttataagctataagctaaaagc 31616528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 650882 - 650917
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  650882 ctttttttgtcaaacgagcttataagctataagcta 650917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 4385627 - 4385662
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4385627 ctttttttgtcaaacgagcttataagctataagcta 4385662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 208
Target Start/End: Original strand, 5520180 - 5520211
Alignment:
Q  177 caaacgagcttataagctataagctataagct 208  Q
    ||||||||||||||||||||||||||||||||    
T  5520180 caaacgagcttataagctataagctataagct 5520211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 8689064 - 8689107
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  8689064 ctttttttgtcaaacgagcttataagctataaactaaaagctaa 8689107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 8815252 - 8815209
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  8815252 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 8815209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 10839682 - 10839725
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||| ||||||||||||||||| |||||||    
T  10839682 ctttttttgtcaaacgagtttataagctataagctaaaagctaa 10839725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 13528006 - 13528049
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  13528006 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 13528049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 18212159 - 18212116
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  18212159 ctttttttgtcaaacgagcttataagctataaggtaaaagctaa 18212116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 18710229 - 18710186
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  18710229 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 18710186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 36999528 - 36999485
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  36999528 ctttttttgtcaaacgagcttataagctataaactaaaagctaa 36999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 37356199 - 37356164
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||||||||||| |||||||    
T  37356199 gtcaaacgagcttataagctataagctaaaagctaa 37356164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 40025044 - 40025087
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||    
T  40025044 ctttttttgtcaaacgagcttatatgctataagctaaaagctaa 40025087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 41322795 - 41322752
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  41322795 ctttttttgtcaaacgagcttataagctataagataaaagctaa 41322752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 2266255 - 2266297
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||||||||||| |||||||||| |||||||    
T  2266255 tttttttgtcaaacgagcttataaactataagctaaaagctaa 2266297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 39167790 - 39167756
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagct 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  39167790 ctttttttgtcaaacgagcttataagctataagct 39167756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 202
Target Start/End: Original strand, 6153556 - 6153585
Alignment:
Q  173 ttgtcaaacgagcttataagctataagcta 202  Q
    ||||||||||||||||||||||||||||||    
T  6153556 ttgtcaaacgagcttataagctataagcta 6153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 7400513 - 7400554
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaacagtgcc 235  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  7400513 tataagctataaactaatttaaatgtcttaccaaacagtgcc 7400554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 17263855 - 17263896
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  17263855 ctttttttgtcaaacgagcttataagctaaaagctaaaagct 17263896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 24402154 - 24402195
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  24402154 ctttttttgtcaaacgagcttataagctaaaagctaaaagct 24402195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 11063005 - 11063075
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgcctta 238  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11063005 tttttttgccaaacgagcttataagctataagctataagctaatttagatgtcttaccaaacagtgcctta 11063075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 26699208 - 26699269
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgc 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26699208 ttgtcaaacgagcttataacctataagctataagctaatttaggtgtcttaccaaacagtgc 26699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 26968941 - 26969002
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgc 234  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26968941 ttgtcaaacgagcttataacctataagctataagctaatttaggtgtcttaccaaacagtgc 26969002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 237
Target Start/End: Original strand, 5382045 - 5382109
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgcctt 237  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5382045 ttgtcaaacgagcttataagctataagctataagctaatttaaatgtcttaccaaacagtgcctt 5382109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 22977322 - 22977389
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgcc 235  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  22977322 tttttttgtcaaacgagcttataaactataagctataagctaatttagatgtcttaccaaacagtgcc 22977389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 1711299 - 1711342
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  1711299 ctttttttgtcaaacgagcttataagctataagctataagctaa 1711342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 9587284 - 9587326
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  9587284 tttttttgtcaaacgagcttataagctataagctataagctaa 9587326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 2671455 - 2671412
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  2671455 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 2671412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 4221569 - 4221612
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  4221569 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 4221612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 5591629 - 5591586
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  5591629 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 5591586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 12713353 - 12713310
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  12713353 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 12713310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 12774617 - 12774574
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  12774617 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 12774574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 14647453 - 14647496
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  14647453 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 14647496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 24794013 - 24793970
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  24794013 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 24793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 30299739 - 30299696
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  30299739 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 30299696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 30412708 - 30412751
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  30412708 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 30412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 39744638 - 39744681
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  39744638 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 39744681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 2236613 - 2236655
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  2236613 tttttttgtcaaacgagcttataagctataagctaaaagctaa 2236655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 5997990 - 5998036
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaattt 213  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||    
T  5997990 ctttttttgtcaaacgagcttataagctataagctaaaagctcattt 5998036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Complemental strand, 16474806 - 16474748
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||||||||||| ||||||||||||||||||||||| |||||   | ||||||||||||    
T  16474806 ttgtcaaacgagtttataagctataagctataagctcatttaatgggcttaccaaacag 16474748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 11100858 - 11100899
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  11100858 ctttttttgtcagacgagcttataagctataagctataagct 11100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 13228574 - 13228611
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13228574 ttgtcaaacgagcttataagctataagctaaaagctaa 13228611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 39246932 - 39246973
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  39246932 ctttttttgtcaaacgagcttataagctataagctaaaagct 39246973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 6604006 - 6604049
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  6604006 ctttttttgtcaaacgaacttataagctataagctaaaagctaa 6604049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 8024080 - 8024123
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  8024080 ctttttttgtcaaacgaacttataagctataagctaaaagctaa 8024123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 19956403 - 19956446
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||    
T  19956403 ctttttttgttaaacgagcttataagctataagctaaaagctaa 19956446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 32382890 - 32382847
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  32382890 ctttttttatcaaacgagcttataagctataagctaaaagctaa 32382847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 36685857 - 36685814
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  36685857 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 36685814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 39275464 - 39275421
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  39275464 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 39275421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 12363710 - 12363744
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  12363710 tttttttgtcaaacgagcttataagctataagcta 12363744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 32381771 - 32381813
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  32381771 tttttttgtcaaacaagcttataagctataagctaaaagctaa 32381813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 43402485 - 43402451
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagct 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  43402485 ctttttttgtcaaacgagcttataagctataagct 43402451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 648552 - 648515
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  648552 tataagctataagctcattgaggtgtcttaccaaacag 648515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 4657679 - 4657712
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  4657679 tttttttgtcaaacgagcttataagctataagct 4657712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 5521338 - 5521305
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  5521338 tttttttgtcaaacgagcttataagctataagct 5521305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 15530475 - 15530442
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  15530475 tttttttgtcaaacgagcttataagctataagct 15530442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 29392208 - 29392245
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  29392208 ttgtcaaacgagcttataaactataagctaaaagctaa 29392245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 19347737 - 19347705
Alignment:
Q  176 tcaaacgagcttataagctataagctataagct 208  Q
    |||||||||||||||||||| ||||||||||||    
T  19347737 tcaaacgagcttataagctaaaagctataagct 19347705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 27130373 - 27130333
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||| ||||||||||||||||||||| |||||    
T  27130373 tttttttgtcaaaagagcttataagctataagctaaaagct 27130333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 35235824 - 35235864
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| ||||||||||||||||||||||| |||||| |||||    
T  35235824 tttttttgtcaaacgagcttataagctaaaagctaaaagct 35235864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 41826431 - 41826395
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagcta 209  Q
    |||||||||||||||||||||||| | ||||||||||    
T  41826431 ttgtcaaacgagcttataagctatcaactataagcta 41826395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 19178296 - 19178365
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacagtgcctt 237  Q
    |||| |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19178296 tttttttgtcaaacgagattataagctataagctataaactaatttagatgtcttaccaaacagtgcctt 19178365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 11015630 - 11015567
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||||||    
T  11015630 tttttttgtcagacgagcttataagctataagctataagctcattgacatgtcttaccaaacag 11015567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 33453777 - 33453714
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaaca 230  Q
    ||||| ||||||||||| ||||||| |||||||||||||||||||  |||||||||| ||||||    
T  33453777 ctttttttgtcaaacgaacttataaactataagctataagctaatagaggtgtcttatcaaaca 33453714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 34439723 - 34439660
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||| |||||| |||||||||||||||||||||||||||||  || |||||| |||||||||||    
T  34439723 tttttttgtcagacgagcttataagctataagctataagctcgttgaggtgtattaccaaacag 34439660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 3108112 - 3108153
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  3108112 ctttttttgtcaaacgagcttataagctataagctataagct 3108153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 210
Target Start/End: Original strand, 1806428 - 1806463
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||||||||||||||||||||    
T  1806428 gtcaaacgagcttataagctataagctataagctaa 1806463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 2442466 - 2442423
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  2442466 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 2442423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 31100120 - 31100163
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  31100120 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 31100163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 31452059 - 31452102
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  31452059 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 31452102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 32731800 - 32731757
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  32731800 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 32731757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 34233020 - 34233063
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  34233020 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 34233063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 34904001 - 34903958
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  34904001 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 34903958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 2970716 - 2970654
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaac 229  Q
    ||||| ||||||||||||||||||  ||||  ||||||||||||| || ||||||||||||||    
T  2970716 ctttttttgtcaaacgagcttataccctattggctataagctaatatatgtgtcttaccaaac 2970654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 29823141 - 29823183
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  29823141 ctttttttgtcaaacgagcttataagctataagctatgagcta 29823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 10856174 - 10856133
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  10856174 ctttttttgtcaaacgagcttataagctataagctaaaagct 10856133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 34685120 - 34685161
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  34685120 ctttttttgtcaaacgagcttataagctataagctaaaagct 34685161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 558400 - 558360
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  558400 tttttttgtcaaacgagcttataagctataagctaaaagct 558360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 28076464 - 28076400
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| ||| |  | |||||||||||||    
T  28076464 ctttttttgtcagacgagtttataagctataagctataagctcattgacatatcttaccaaacag 28076400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 12297406 - 12297371
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  12297406 ctttttttgtcaaacgagcttataagctataagcta 12297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 20805031 - 20804996
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20805031 ctttttttgtcaaacgagcttataagctataagcta 20804996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 29415016 - 29415051
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  29415016 ctttttttgtcaaacgagcttataagctataagcta 29415051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 30811254 - 30811297
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  30811254 ctttttttgtcaaacgaacttataagctataagctaaaagctaa 30811297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 14227649 - 14227683
Alignment:
Q  176 tcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||||||||||| |||||||    
T  14227649 tcaaacgagcttataagctataagctaaaagctaa 14227683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 3832388 - 3832421
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  3832388 tttttttgtcaaacgagcttataagctataagct 3832421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 12432727 - 12432760
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  12432727 tttttttgtcaaacgagcttataagctataagct 12432760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 33540832 - 33540865
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  33540832 tttttttgtcaaacgagcttataagctataagct 33540865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 28425730 - 28425786
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaac 229  Q
    |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  28425730 ttgtcaaacgagtttataagctataagctataagctaatagaggtgtcttaccaaac 28425786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 23029823 - 23029767
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  23029823 gtcagacgagcttataagctataagctataagctcattgtggtgtcttaccaaacag 23029767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 10312142 - 10312185
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  10312142 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 10312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 36246489 - 36246532
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  36246489 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 36246532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 42587496 - 42587539
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  42587496 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 42587539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 43254145 - 43254102
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  43254145 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 43254102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 45687029 - 45687072
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  45687029 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 45687072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 47471075 - 47471118
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  47471075 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 47471118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 40637274 - 40637316
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  40637274 tttttttgtcaaacgagcttataagctataagctaaaagctaa 40637316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 42375896 - 42375938
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  42375896 tttttttgtcaaacgagcttataagctataagctaaaagctaa 42375938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 1342818 - 1342777
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  1342818 ctttttttgtcagacgagcttataagctataagctataagct 1342777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 27089769 - 27089810
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  27089769 ctttttttgtcaaacgagcttataagctataagctaaaagct 27089810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 27188532 - 27188491
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  27188532 ctttttttgtcaaacgagcttataagctataagctaaaagct 27188491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 31511341 - 31511301
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  31511341 tttttttgtcaaacgagcttataagctataagctaaaagct 31511301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 35587620 - 35587580
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  35587620 tttttttgtcaaacgagcttataagctataagctaaaagct 35587580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 9487449 - 9487406
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||| ||||||||||||||||||||||| |||||||    
T  9487449 ctttttttgtcagacgagcttataagctataagctaaaagctaa 9487406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 21254810 - 21254853
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  21254810 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 21254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 32168875 - 32168840
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32168875 ctttttttgtcaaacgagcttataagctataagcta 32168840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 21374674 - 21374632
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  21374674 tttttttgtcaaacaagcttataagctataagctaaaagctaa 21374632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 21742012 - 21741978
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  21742012 tttttttgtcaaacgagcttataagctataagcta 21741978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 27655786 - 27655828
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| || |||||||||||||||||||| |||||||||||||    
T  27655786 ctttttttatcaaacgagcttataagctaaaagctataagcta 27655828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 27869675 - 27869709
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagct 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  27869675 ctttttttgtcaaacgagcttataagctataagct 27869709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 36436190 - 36436153
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  36436190 ttgtcaaacgagcttataagatataagctaaaagctaa 36436153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 43134441 - 43134404
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  43134441 ttgtgaaacgagcttataagctataagctaaaagctaa 43134404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 45222186 - 45222227
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||| |||||||||| |||||    
T  45222186 ctttttttgtcaaacgagcttataaactataagctaaaagct 45222227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 48832166 - 48832207
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  48832166 ctttttttgtcaaacgagcttataagctaaaagctaaaagct 48832207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 30814360 - 30814420
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaa 227  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  30814360 ctttttttgtcaaacgagcttaaaagctataagctataagctaatagaggtgtcttaccaa 30814420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 42217705 - 42217642
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaaca 230  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||    
T  42217705 ctttttttatcaaacgagcttataagctataagctataagctaattgagatgtgttaccaaaca 42217642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 2851839 - 2851802
Alignment:
Q  201 tataagctaatttaggtgtcttaccaaacagtgcctta 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2851839 tataagctaatttaggtgtcttaccaaacagtgcctta 2851802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 5505893 - 5505852
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  5505893 ctttttttgtcaaacgagcttataagctataagctataagct 5505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 24628329 - 24628370
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaacagtgcc 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24628329 tataagctataagctaatttaggtgtcttaccaaatagtgcc 24628370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 52595444 - 52595508
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||| |||||||||||||||||||| ||||||||  || |||||||||| |||||||    
T  52595444 ctttttttgtcagacgagcttataagctataagttataagctcgttgaggtgtcttatcaaacag 52595508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 193433 - 193398
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagct 208  Q
    ||||||||||||||||||||||||||||||||||||    
T  193433 ttgtcaaacgagcttataagctataagctataagct 193398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 8872915 - 8872872
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  8872915 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 8872872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 16127249 - 16127292
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  16127249 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 16127292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 25570421 - 25570378
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  25570421 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 25570378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 26541002 - 26540959
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  26541002 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 26540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 29081391 - 29081434
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  29081391 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 29081434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 37088326 - 37088283
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  37088326 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 37088283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 38185812 - 38185769
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  38185812 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 38185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 40480131 - 40480174
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  40480131 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 40480174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 40563473 - 40563516
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  40563473 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 40563516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 44545272 - 44545229
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  44545272 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 44545229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 44845666 - 44845623
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  44845666 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 44845623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 45345118 - 45345161
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  45345118 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 45345161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 2187312 - 2187370
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||||||||||||||||| ||||||||||| ||||| ||||||  | ||||||||||||    
T  2187312 ttgtcaaacgagcttataggctataagctaaaagctcatttagtgggcttaccaaacag 2187370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 35499642 - 35499600
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||||||||||||| |||||||    
T  35499642 tttttttgtcaaacgagcttataagctataagctaaaagctaa 35499600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 39719396 - 39719358
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataa 205  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  39719396 ctttttttgtcaaacgagcttataagctataagctataa 39719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 52225327 - 52225281
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaattt 213  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||    
T  52225327 cttttgttgtcaaacgagcttataagctatgagctataagctcattt 52225281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 44947311 - 44947352
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  44947311 ctttttttatcaaacgagcttataagctataagctataagct 44947352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 52788718 - 52788677
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  52788718 ctttttttgtcaaacgagcttataagctataagctaaaagct 52788677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 52794937 - 52794896
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  52794937 ctttttttgtcaaacgagcttataagctataagctaaaagct 52794896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 54542045 - 54542086
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  54542045 ctttttttgtcaaacgagcttataagctataagctaaaagct 54542086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 55305219 - 55305260
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  55305219 ctttttttgtcaaacgagcttataagctataagctaaaagct 55305260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 31558316 - 31558372
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||||||||||||||||||||||||||  ||||| ||||||  | ||||||||||||    
T  31558316 gtcaaacgagcttataagctataagctcaaagctcatttagtgggcttaccaaacag 31558372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 48943032 - 48942992
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  48943032 tttttttgtcaaacgagcttataagctataagctaaaagct 48942992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 19948428 - 19948471
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||    
T  19948428 ctttttttgtcaaacgagcttataaactataagctagaagctaa 19948471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 28677000 - 28677043
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  28677000 ctttttttttcaaacgagcttataagctataagctaaaagctaa 28677043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 37528833 - 37528868
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37528833 ctttttttgtcaaacgagcttataagctataagcta 37528868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 38892096 - 38892139
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||    
T  38892096 ctttttttgtcaaacgagcttataaactataagctaaaagctaa 38892139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 41785851 - 41785808
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  41785851 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 41785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 46248074 - 46248109
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  46248074 ctttttttgtcaaacgagcttataagctataagcta 46248109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 24536804 - 24536834
Alignment:
Q  172 attgtcaaacgagcttataagctataagcta 202  Q
    |||||||||||||||||||||||||||||||    
T  24536804 attgtcaaacgagcttataagctataagcta 24536834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 37490034 - 37490076
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||    
T  37490034 ctttttttgtcaaacaagcttataagctatcagctataagcta 37490076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 45368652 - 45368610
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| |||||| ||||||||||||||||| ||||||||||||    
T  45368652 ctttttttgtcagacgagcttataagctatcagctataagcta 45368610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 46627609 - 46627643
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  46627609 tttttttgtcaaacgagcttataagctataagcta 46627643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 37714075 - 37714116
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| || ||||||||||||||||||||||||||| |||||    
T  37714075 ctttttttatcaaacgagcttataagctataagctaaaagct 37714116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 39469947 - 39469914
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagct 208  Q
    |||||||||||||||||||||||||||| |||||    
T  39469947 gtcaaacgagcttataagctataagctaaaagct 39469914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 39719301 - 39719334
Alignment:
Q  182 gagcttataagctataagctataagctaatttag 215  Q
    ||||||||||||||||||||||||||| ||||||    
T  39719301 gagcttataagctataagctataagcttatttag 39719334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 43525785 - 43525744
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||| ||||||||||||||||||||| |||||    
T  43525785 ctttttttgtcaaatgagcttataagctataagctaaaagct 43525744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 53779073 - 53779032
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||||||| |||||| |||||    
T  53779073 ctttttttgtcaaacgagcttataagctaaaagctaaaagct 53779032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 192054 - 191990
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||||||    
T  192054 ctttttttgtcatacgagcttataagctataagctataagctcattgacatgtcttaccaaacag 191990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 39677417 - 39677353
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| ||||||||| |||||||||||||||||||||||||| ||||||  | ||||||||||||    
T  39677417 ctttttttgtcaaacaagcttataagctataagctataagctcatttagtgggcttaccaaacag 39677353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 3511251 - 3511195
Alignment:
Q  175 gtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    |||| |||| |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  3511251 gtcagacgaacttataagctataagctataagttcattgaggtgtcttaccaaacag 3511195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17081695 - 17081652
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  17081695 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 17081652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 25023347 - 25023304
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  25023347 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 25023304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 31478117 - 31478074
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  31478117 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 31478074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 31581735 - 31581692
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  31581735 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 31581692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 32541264 - 32541221
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  32541264 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 32541221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 43276876 - 43276919
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  43276876 ctttttttatcaaacgagcttataagctataagctataagctaa 43276919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 45141560 - 45141603
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  45141560 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 45141603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 3427726 - 3427787
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaa 228  Q
    ||||| |||||| |||||||||||| |||||||||||||||| |||  ||||||||| ||||    
T  3427726 ctttttttgtcagacgagcttataacctataagctataagctcattgtggtgtcttatcaaa 3427787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 27781143 - 27781102
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  27781143 ctttttttgtcaaacgagcttataagctataagctaaaagct 27781102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 39871300 - 39871263
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||||||||||||| |||||||    
T  39871300 ttgtcaaacgagcttataagctataagctaaaagctaa 39871263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 29189831 - 29189879
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttag 215  Q
    ||||| || ||||||||| ||||||||||||||||||||||| ||||||    
T  29189831 cttttcttatcaaacgagtttataagctataagctataagctcatttag 29189879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 11741198 - 11741241
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  11741198 ctttttttgtcaaacgagcttataagctataaactaaaagctaa 11741241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17115579 - 17115536
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  17115579 ctttttttttcaaacgagcttataagctataagctaaaagctaa 17115536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 28709348 - 28709305
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  28709348 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 28709305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 28716705 - 28716662
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  28716705 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 28716662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 36681552 - 36681587
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  36681552 ctttttttgtcaaacgagcttataagctataagcta 36681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 38171532 - 38171575
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  38171532 ctttttttgtcaaacgagcttataagctataaactaaaagctaa 38171575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 41694020 - 41694055
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagct 208  Q
    |||||||||||||||||||||||||||||| |||||    
T  41694020 ttgtcaaacgagcttataagctataagctaaaagct 41694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 44827422 - 44827457
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  44827422 ctttttttgtcaaacgagcttataagctataagcta 44827457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 1893956 - 1893990
Alignment:
Q  176 tcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||||||||||| |||||||    
T  1893956 tcaaacgagcttataagctataagctaaaagctaa 1893990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 6338350 - 6338316
Alignment:
Q  176 tcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||||||||||| |||||||    
T  6338350 tcaaacgagcttataagctataagctagaagctaa 6338316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 11298147 - 11298181
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  11298147 tttttttgtcaaacgagcttataagctataagcta 11298181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 210
Target Start/End: Complemental strand, 23676903 - 23676869
Alignment:
Q  176 tcaaacgagcttataagctataagctataagctaa 210  Q
    ||||||||||||||||||||||||||| |||||||    
T  23676903 tcaaacgagcttataagctataagctaaaagctaa 23676869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 31688155 - 31688189
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagct 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  31688155 ctttttttgtcaaacgagcttataagctataagct 31688189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 32099576 - 32099542
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  32099576 tttttttgtcaaacgagcttataagctataagcta 32099542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 34395454 - 34395496
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||||||||||||||||||| || |||||||    
T  34395454 tttttttgtcaaacgagcttataagctataagttaaaagctaa 34395496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 42142841 - 42142883
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||||||||||||||||||||| || |||||||    
T  42142841 tttttttgtcaaacgagcttataagctataagttaaaagctaa 42142883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 40551847 - 40551814
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  40551847 tttttttgtcaaacgagcttataagctataagct 40551814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 41313416 - 41313375
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  41313416 ctttttttgtcaaacgagtttataagctataagctaaaagct 41313375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 8270947 - 8270915
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataag 199  Q
    ||||| |||||||||||||||||||||||||||    
T  8270947 ctttttttgtcaaacgagcttataagctataag 8270915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 22878030 - 22878062
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataag 199  Q
    ||||| |||||||||||||||||||||||||||    
T  22878030 ctttttttgtcaaacgagcttataagctataag 22878062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Complemental strand, 39702340 - 39702312
Alignment:
Q  174 tgtcaaacgagcttataagctataagcta 202  Q
    |||||||||||||||||||||||||||||    
T  39702340 tgtcaaacgagcttataagctataagcta 39702312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 17715622 - 17715579
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  17715622 ctttttttgtcaaacgagcttataagctataagctataagctaa 17715579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 7706410 - 7706367
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  7706410 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 7706367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 9043717 - 9043760
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  9043717 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 9043760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 11600721 - 11600678
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  11600721 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 11600678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 18582882 - 18582839
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  18582882 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 18582839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 22038463 - 22038506
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  22038463 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 22038506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 28307293 - 28307250
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  28307293 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 28307250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 35777492 - 35777535
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  35777492 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 35777535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 39087664 - 39087707
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  39087664 ctttttttgtcaaacgagcttataagctataagctagaagctaa 39087707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 42116934 - 42116891
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  42116934 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 42116891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 45780843 - 45780886
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  45780843 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 45780886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 46895321 - 46895278
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  46895321 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 46895278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 47417581 - 47417624
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  47417581 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 47417624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 53273156 - 53273113
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  53273156 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 53273113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 53407227 - 53407184
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  53407227 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 53407184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 55495986 - 55496029
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  55495986 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 55496029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 56372473 - 56372430
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  56372473 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 56372430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 21633922 - 21633964
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagcta 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  21633922 ctttttttgtcaaacgaacttataagctataagctataagcta 21633964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 11152045 - 11152086
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  11152045 ctttttttgtcaaacgagcttataagctataagctaaaagct 11152086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 27397872 - 27397913
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  27397872 ctttttttgtcaaacgagcttataagctataagctaaaagct 27397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 29413569 - 29413528
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  29413569 ctttttttgtcaaacgagcttataagctataagctaaaagct 29413528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 29663967 - 29663926
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  29663967 ctttttttgtcaaacgagcttataagctataagctaaaagct 29663926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 33005234 - 33005275
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  33005234 ctttttttgtcaaacgagcttataagctataagctaaaagct 33005275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 4391814 - 4391878
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaacag 231  Q
    ||||| |||||| ||||||||||||||||| |||||||||||  |||  |||| |||||||||||    
T  4391814 ctttttttgtcagacgagcttataagctatcagctataagctcctttttgtgtgttaccaaacag 4391878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 35190723 - 35190763
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  35190723 tttttttgtcagacgagcttataagctataagctataagct 35190763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 36008112 - 36008152
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  36008112 tttttttgtcaaacgagcttataagctataagctaaaagct 36008152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 37831940 - 37831904
Alignment:
Q  194 tataagctataagctaatttaggtgtcttaccaaaca 230  Q
    |||||||||||||||||||||||||| ||||||||||    
T  37831940 tataagctataagctaatttaggtgttttaccaaaca 37831904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 4517297 - 4517340
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  4517297 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 4517340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 8829921 - 8829956
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8829921 ctttttttgtcaaacgagcttataagctataagcta 8829956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 12234073 - 12234116
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||||||||||| || |||||||    
T  12234073 ctttttttgtcaaacgagcttataagctataagttaaaagctaa 12234116  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 19513988 - 19514031
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  19513988 ctttttttgtcaaacgaacttataagctataagctaaaagctaa 19514031  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 25199402 - 25199445
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||    
T  25199402 ctttttttgtcaaacgagcttataaactataagctaaaagctaa 25199445  T

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Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 31679007 - 31678972
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  31679007 ctttttttgtcaaacgagcttataagctataagcta 31678972  T

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Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 37115389 - 37115432
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||| ||||||||||| |||||||    
T  37115389 ctttttttgtcaaacgagcttatatgctataagctaaaagctaa 37115432  T

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Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Complemental strand, 45906177 - 45906142
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  45906177 ctttttttgtcaaacgagcttataagctataagcta 45906142  T

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Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 30562954 - 30562988
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagct 201  Q
    ||||| |||||||||||||||||||||||||||||    
T  30562954 ctttttttgtcaaacgagcttataagctataagct 30562988  T

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Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 35822406 - 35822448
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| |||||||||||||||||||| ||||||||| |||||||    
T  35822406 tttttttgtcaaacgagcttataagttataagctaaaagctaa 35822448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 37831959 - 37831925
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagcta 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  37831959 tttttttgtcaaacgagcttataagctataagcta 37831925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 52670031 - 52669989
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||| ||||||||| |||||||||||||||||||| |||||||    
T  52670031 tttttttgtcaaacaagcttataagctataagctaaaagctaa 52669989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 3009749 - 3009708
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  3009749 ctttttttgtcaaacgagtttataagctataagctaaaagct 3009708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 4939491 - 4939532
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| ||||||||||||||||||| |||||||||| |||||    
T  4939491 ctttttttgtcaaacgagcttataaactataagctaaaagct 4939532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 23867975 - 23868016
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||||| ||||||||||||||||||||| |||||    
T  23867975 ctttttttgtcaaaagagcttataagctataagctaaaagct 23868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 55684733 - 55684692
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagct 208  Q
    ||||| |||||| ||||||||||||||||| |||||||||||    
T  55684733 ctttttttgtcagacgagcttataagctatcagctataagct 55684692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 6902235 - 6902263
Alignment:
Q  173 ttgtcaaacgagcttataagctataagct 201  Q
    |||||||||||||||||||||||||||||    
T  6902235 ttgtcaaacgagcttataagctataagct 6902263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 8941942 - 8941910
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataag 199  Q
    ||||| |||||||||||||||||||||||||||    
T  8941942 ctttttttgtcaaacgagcttataagctataag 8941910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 24954316 - 24954348
Alignment:
Q  176 tcaaacgagcttataagctataagctataagct 208  Q
    ||||||||||||||||||||||| |||||||||    
T  24954316 tcaaacgagcttataagctataaactataagct 24954348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 29656806 - 29656834
Alignment:
Q  174 tgtcaaacgagcttataagctataagcta 202  Q
    |||||||||||||||||||||||||||||    
T  29656806 tgtcaaacgagcttataagctataagcta 29656834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 35468052 - 35468012
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagct 208  Q
    |||| ||||||||||||||||||||||||||| || |||||    
T  35468052 tttttttgtcaaacgagcttataagctataagttaaaagct 35468012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 36196906 - 36196874
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataa 205  Q
    ||||||||||||||||||| |||||||||||||    
T  36196906 ttgtcaaacgagcttataaactataagctataa 36196874  T

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Target: scaffold0343 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 9270 - 9210
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaatttaggtgtcttaccaaa 228  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||  | |||||||||    
T  9270 tttttttgtcaaacgagcttataaggtataagctataagctcatttagtgggcttaccaaa 9210  T

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Target: scaffold0166 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 36396 - 36353
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  36396 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 36353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 22636 - 22593
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  22636 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 22593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 126865 - 126908
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  126865 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 126908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 41850 - 41893
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  41850 ctttttttgtcaaacgagcttataagctataagctaaaagctaa 41893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 27246 - 27283
Alignment:
Q  173 ttgtcaaacgagcttataagctataagctataagctaa 210  Q
    |||||||||||||||||||||||||||||| |||||||    
T  27246 ttgtcaaacgagcttataagctataagctaaaagctaa 27283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 28190 - 28225
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagcta 202  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28190 ctttttttgtcaaacgagcttataagctataagcta 28225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 12822 - 12865
Alignment:
Q  167 cttttattgtcaaacgagcttataagctataagctataagctaa 210  Q
    ||||| || ||||||||||||||||||||||||||| |||||||    
T  12822 ctttttttatcaaacgagcttataagctataagctaaaagctaa 12865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 213
Target Start/End: Complemental strand, 84295 - 84250
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagctataagctaattt 213  Q
    |||| ||||||||||| |||||| ||||||||||||||||| ||||    
T  84295 tttttttgtcaaacgaacttatatgctataagctataagctcattt 84250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 50433 - 50400
Alignment:
Q  168 ttttattgtcaaacgagcttataagctataagct 201  Q
    |||| |||||||||||||||||||||||||||||    
T  50433 tttttttgtcaaacgagcttataagctataagct 50400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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