View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12498_low_8 (Length: 291)

Name: NF12498_low_8
Description: NF12498
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12498_low_8
NF12498_low_8
[»] scaffold0347 (2 HSPs)
scaffold0347 (11-266)||(14440-14696)
scaffold0347 (132-261)||(13611-13740)
[»] chr1 (103 HSPs)
chr1 (63-260)||(25065858-25066055)
chr1 (121-260)||(25064936-25065075)
chr1 (131-261)||(13295137-13295267)
chr1 (123-258)||(46282753-46282888)
chr1 (163-261)||(49093043-49093141)
chr1 (182-258)||(32619389-32619465)
chr1 (183-258)||(32238704-32238779)
chr1 (183-258)||(50062968-50063043)
chr1 (182-258)||(32622375-32622451)
chr1 (182-261)||(46282073-46282152)
chr1 (156-258)||(6345630-6345732)
chr1 (191-261)||(13295608-13295678)
chr1 (163-266)||(2828190-2828293)
chr1 (182-261)||(51935218-51935297)
chr1 (182-258)||(6344260-6344336)
chr1 (105-177)||(34850335-34850407)
chr1 (26-75)||(25065797-25065846)
chr1 (105-173)||(37578462-37578530)
chr1 (163-261)||(2829539-2829644)
chr1 (105-172)||(24009811-24009878)
chr1 (183-266)||(24701573-24701656)
chr1 (195-266)||(36380181-36380253)
chr1 (105-172)||(14879062-14879129)
chr1 (121-172)||(32917351-32917402)
chr1 (182-225)||(49093832-49093875)
chr1 (183-258)||(52563656-52563731)
chr1 (163-261)||(2953748-2953846)
chr1 (192-258)||(36381451-36381517)
chr1 (131-172)||(1841550-1841591)
chr1 (163-244)||(5183790-5183871)
chr1 (107-172)||(6367653-6367718)
chr1 (128-172)||(1103552-1103596)
chr1 (105-172)||(4960631-4960698)
chr1 (163-258)||(5926524-5926619)
chr1 (163-234)||(10019657-10019728)
chr1 (126-177)||(10304009-10304060)
chr1 (126-177)||(10304146-10304197)
chr1 (186-261)||(28534820-28534894)
chr1 (194-261)||(29043070-29043137)
chr1 (114-177)||(34849097-34849160)
chr1 (121-172)||(40210656-40210707)
chr1 (105-172)||(46163121-46163188)
chr1 (118-169)||(48691242-48691293)
chr1 (163-261)||(1047488-1047586)
chr1 (195-249)||(5926837-5926891)
chr1 (163-249)||(19755689-19755775)
chr1 (163-261)||(25414846-25414944)
chr1 (131-173)||(31514582-31514624)
chr1 (163-261)||(37152822-37152920)
chr1 (163-249)||(46849942-46850028)
chr1 (131-172)||(183487-183528)
chr1 (131-172)||(4716733-4716774)
chr1 (196-249)||(6056500-6056553)
chr1 (105-177)||(9443658-9443731)
chr1 (196-249)||(12577219-12577272)
chr1 (116-177)||(13245936-13245997)
chr1 (107-172)||(13914339-13914404)
chr1 (131-172)||(24905432-24905473)
chr1 (131-172)||(25647975-25648016)
chr1 (105-190)||(27999121-27999206)
chr1 (131-172)||(28011454-28011495)
chr1 (196-249)||(29042879-29042932)
chr1 (131-172)||(33442859-33442900)
chr1 (131-172)||(36694544-36694585)
chr1 (131-172)||(36710645-36710686)
chr1 (131-172)||(42248564-42248605)
chr1 (132-177)||(42267389-42267434)
chr1 (196-249)||(46364782-46364835)
chr1 (163-260)||(49002879-49002976)
chr1 (194-261)||(6056693-6056761)
chr1 (134-178)||(16970834-16970878)
chr1 (184-220)||(50062246-50062282)
chr1 (163-266)||(739216-739319)
chr1 (121-172)||(17662136-17662187)
chr1 (133-172)||(40772598-40772637)
chr1 (105-172)||(41098824-41098891)
chr1 (105-172)||(43758913-43758980)
chr1 (105-172)||(44523406-44523473)
chr1 (163-261)||(1040300-1040398)
chr1 (196-250)||(1040422-1040476)
chr1 (163-261)||(1047206-1047304)
chr1 (196-250)||(1047328-1047382)
chr1 (163-261)||(33347418-33347516)
chr1 (199-249)||(33347623-33347673)
chr1 (163-249)||(33347700-33347786)
chr1 (163-245)||(46545015-46545097)
chr1 (107-172)||(19017901-19017966)
chr1 (131-172)||(19515910-19515951)
chr1 (116-177)||(21444680-21444741)
chr1 (116-177)||(22103787-22103848)
chr1 (131-172)||(26024514-26024555)
chr1 (196-249)||(26953308-26953361)
chr1 (163-240)||(29980922-29980999)
chr1 (131-172)||(30711418-30711459)
chr1 (131-172)||(34464745-34464786)
chr1 (131-172)||(35152434-35152475)
chr1 (131-172)||(47999388-47999429)
chr1 (196-249)||(49003082-49003135)
chr1 (131-172)||(52134159-52134200)
chr1 (196-261)||(52454950-52455015)
chr1 (197-249)||(29980845-29980897)
chr1 (105-173)||(35152613-35152681)
chr1 (166-258)||(52564954-52565046)
[»] chr7 (66 HSPs)
chr7 (121-261)||(38643552-38643692)
chr7 (63-261)||(38644571-38644758)
chr7 (105-266)||(45915750-45915911)
chr7 (123-261)||(4227132-4227270)
chr7 (131-266)||(12643097-12643232)
chr7 (127-266)||(47558027-47558166)
chr7 (131-261)||(12644101-12644231)
chr7 (131-261)||(4226127-4226257)
chr7 (163-261)||(7158233-7158331)
chr7 (163-261)||(12929289-12929387)
chr7 (163-261)||(12930774-12930872)
chr7 (131-261)||(45914528-45914656)
chr7 (182-266)||(37284106-37284190)
chr7 (182-266)||(37289329-37289413)
chr7 (131-261)||(27479989-27480119)
chr7 (182-258)||(22661362-22661438)
chr7 (186-258)||(31695637-31695709)
chr7 (182-261)||(27480766-27480845)
chr7 (188-258)||(31694476-31694546)
chr7 (26-79)||(43123398-43123451)
chr7 (105-172)||(2640448-2640515)
chr7 (105-172)||(5457177-5457244)
chr7 (121-172)||(32053429-32053480)
chr7 (182-261)||(37563657-37563736)
chr7 (196-261)||(15827916-15827981)
chr7 (196-261)||(26825825-26825890)
chr7 (185-258)||(40022551-40022623)
chr7 (186-266)||(7159235-7159315)
chr7 (105-172)||(23181264-23181331)
chr7 (105-172)||(24388910-24388977)
chr7 (105-172)||(28469278-28469345)
chr7 (194-261)||(37563356-37563423)
chr7 (105-172)||(40379860-40379927)
chr7 (163-249)||(12931022-12931108)
chr7 (163-261)||(43937896-43937994)
chr7 (163-261)||(43938178-43938276)
chr7 (107-172)||(3914229-3914294)
chr7 (127-172)||(6571104-6571149)
chr7 (131-172)||(17102111-17102152)
chr7 (131-172)||(27396891-27396932)
chr7 (131-172)||(27991830-27991871)
chr7 (131-172)||(30948425-30948466)
chr7 (131-172)||(32680860-32680901)
chr7 (196-249)||(34454687-34454740)
chr7 (196-249)||(37563561-37563614)
chr7 (131-172)||(42731510-42731551)
chr7 (131-172)||(45010900-45010941)
chr7 (94-150)||(22539252-22539308)
chr7 (105-172)||(10935885-10935952)
chr7 (110-177)||(11397464-11397531)
chr7 (163-266)||(26825627-26825730)
chr7 (183-258)||(40021496-40021571)
chr7 (206-261)||(47121411-47121466)
chr7 (163-249)||(27558136-27558222)
chr7 (196-250)||(43938100-43938154)
chr7 (187-244)||(5636045-5636102)
chr7 (196-249)||(12929461-12929514)
chr7 (131-172)||(22871573-22871614)
chr7 (131-172)||(32299001-32299042)
chr7 (197-266)||(34454798-34454867)
chr7 (131-172)||(34928915-34928956)
chr7 (105-166)||(37656949-37657010)
chr7 (131-172)||(39686799-39686840)
chr7 (131-172)||(45010689-45010730)
chr7 (194-266)||(12928034-12928106)
chr7 (125-177)||(13311323-13311375)
[»] chr5 (75 HSPs)
chr5 (131-261)||(22870430-22870560)
chr5 (131-256)||(22869612-22869737)
chr5 (131-261)||(20856934-20857064)
chr5 (163-266)||(14744730-14744833)
chr5 (186-261)||(31107933-31108008)
chr5 (123-258)||(36476770-36476905)
chr5 (131-261)||(20857515-20857645)
chr5 (143-258)||(36477356-36477471)
chr5 (163-261)||(21978971-21979069)
chr5 (182-266)||(39181054-39181138)
chr5 (182-261)||(20072888-20072967)
chr5 (131-261)||(20072123-20072253)
chr5 (182-258)||(16532898-16532974)
chr5 (182-258)||(21978036-21978112)
chr5 (185-261)||(8654109-8654185)
chr5 (182-258)||(8673777-8673853)
chr5 (182-261)||(16533644-16533723)
chr5 (182-261)||(39181815-39181894)
chr5 (163-260)||(31108338-31108434)
chr5 (184-258)||(21972095-21972168)
chr5 (163-261)||(25253088-25253186)
chr5 (163-261)||(25316878-25316976)
chr5 (163-225)||(39402148-39402210)
chr5 (105-177)||(14848976-14849049)
chr5 (105-172)||(13962955-13963022)
chr5 (105-172)||(19892578-19892645)
chr5 (194-261)||(33735315-33735382)
chr5 (121-172)||(35512239-35512290)
chr5 (105-172)||(38442159-38442226)
chr5 (163-249)||(14745462-14745548)
chr5 (163-249)||(21260879-21260965)
chr5 (163-261)||(32052508-32052606)
chr5 (107-172)||(29646634-29646699)
chr5 (107-172)||(32242333-32242398)
chr5 (128-172)||(8322495-8322539)
chr5 (128-172)||(35920477-35920521)
chr5 (121-172)||(5024304-5024355)
chr5 (105-172)||(11047528-11047595)
chr5 (105-172)||(13362498-13362565)
chr5 (194-261)||(25253401-25253468)
chr5 (194-261)||(25317192-25317259)
chr5 (163-266)||(33735597-33735700)
chr5 (105-172)||(39453391-39453458)
chr5 (183-261)||(18934715-18934793)
chr5 (199-249)||(31118969-31119019)
chr5 (126-172)||(38475290-38475336)
chr5 (131-172)||(297279-297320)
chr5 (131-172)||(3529138-3529179)
chr5 (131-172)||(5993980-5994021)
chr5 (196-249)||(6421829-6421882)
chr5 (131-172)||(6758130-6758171)
chr5 (196-249)||(7015522-7015575)
chr5 (131-172)||(14194719-14194760)
chr5 (196-249)||(18013736-18013789)
chr5 (131-172)||(28269684-28269725)
chr5 (131-172)||(28771134-28771175)
chr5 (131-172)||(31482667-31482708)
chr5 (196-249)||(33735520-33735573)
chr5 (131-172)||(41930607-41930648)
chr5 (121-177)||(12904840-12904896)
chr5 (105-172)||(10684030-10684097)
chr5 (194-261)||(32052226-32052293)
chr5 (163-234)||(37945023-37945094)
chr5 (134-172)||(6150545-6150583)
chr5 (183-249)||(8323070-8323136)
chr5 (163-249)||(14745597-14745683)
chr5 (122-172)||(24547412-24547462)
chr5 (131-172)||(1506058-1506099)
chr5 (196-249)||(12990912-12990965)
chr5 (196-249)||(13064533-13064586)
chr5 (196-249)||(25253210-25253263)
chr5 (131-172)||(27587239-27587280)
chr5 (196-249)||(32052431-32052484)
chr5 (132-172)||(186510-186550)
chr5 (199-263)||(41339547-41339611)
[»] chr2 (64 HSPs)
chr2 (131-261)||(25623290-25623420)
chr2 (123-261)||(25624393-25624531)
chr2 (163-261)||(24387353-24387451)
chr2 (162-261)||(24388255-24388354)
chr2 (182-261)||(20101772-20101851)
chr2 (182-266)||(20982521-20982605)
chr2 (182-266)||(29957814-29957898)
chr2 (131-261)||(29958515-29958645)
chr2 (180-261)||(20103161-20103242)
chr2 (182-261)||(20983280-20983359)
chr2 (190-258)||(43236509-43236577)
chr2 (163-256)||(19620793-19620886)
chr2 (190-258)||(43237747-43237815)
chr2 (163-261)||(10446834-10446932)
chr2 (107-172)||(36755184-36755249)
chr2 (163-249)||(16367247-16367333)
chr2 (190-259)||(7981051-7981120)
chr2 (116-177)||(11721371-11721432)
chr2 (183-264)||(33882892-33882973)
chr2 (107-172)||(37895619-37895684)
chr2 (190-258)||(7983837-7983905)
chr2 (163-275)||(16366951-16367063)
chr2 (194-262)||(21103087-21103150)
chr2 (194-261)||(1149939-1150006)
chr2 (121-172)||(15848179-15848230)
chr2 (126-177)||(17266484-17266535)
chr2 (163-266)||(20911127-20911230)
chr2 (85-172)||(25893468-25893555)
chr2 (194-261)||(32519157-32519224)
chr2 (183-258)||(33881580-33881655)
chr2 (105-172)||(36382252-36382319)
chr2 (105-172)||(39423606-39423673)
chr2 (115-177)||(10840562-10840624)
chr2 (127-172)||(1696001-1696046)
chr2 (131-172)||(6657969-6658010)
chr2 (131-172)||(11163319-11163360)
chr2 (131-172)||(14900748-14900789)
chr2 (131-172)||(16099146-16099187)
chr2 (196-249)||(32519279-32519332)
chr2 (131-172)||(33739794-33739835)
chr2 (107-172)||(34447904-34447968)
chr2 (131-172)||(39498401-39498442)
chr2 (131-172)||(44714057-44714098)
chr2 (194-266)||(1150252-1150324)
chr2 (185-249)||(9694048-9694112)
chr2 (129-177)||(17266624-17266672)
chr2 (183-251)||(23206428-23206496)
chr2 (183-251)||(23678032-23678100)
chr2 (85-148)||(6573656-6573719)
chr2 (105-172)||(10712814-10712881)
chr2 (194-261)||(22731847-22731914)
chr2 (183-250)||(37985031-37985098)
chr2 (194-260)||(18476910-18476976)
chr2 (107-172)||(2318249-2318314)
chr2 (127-172)||(6573137-6573182)
chr2 (107-180)||(11349477-11349550)
chr2 (116-177)||(11689627-11689688)
chr2 (131-172)||(13995938-13995979)
chr2 (196-249)||(22731739-22731792)
chr2 (131-172)||(33062315-33062356)
chr2 (131-172)||(36479809-36479850)
chr2 (131-172)||(41248824-41248865)
chr2 (194-266)||(32519470-32519542)
chr2 (105-173)||(44044204-44044272)
[»] chr3 (61 HSPs)
chr3 (127-266)||(29192957-29193096)
chr3 (131-261)||(32717073-32717203)
chr3 (131-258)||(29192040-29192167)
chr3 (143-258)||(37249204-37249319)
chr3 (182-261)||(45279303-45279382)
chr3 (182-258)||(44476054-44476130)
chr3 (131-261)||(2943915-2944045)
chr3 (182-261)||(2944685-2944764)
chr3 (182-261)||(11026651-11026730)
chr3 (182-261)||(22736709-22736788)
chr3 (182-258)||(44481972-44482048)
chr3 (182-258)||(45278549-45278625)
chr3 (182-258)||(48188383-48188459)
chr3 (182-266)||(48189118-48189202)
chr3 (182-261)||(1757323-1757402)
chr3 (182-258)||(37249817-37249892)
chr3 (182-249)||(43105853-43105920)
chr3 (182-249)||(1756564-1756631)
chr3 (182-261)||(43105235-43105314)
chr3 (131-237)||(11025963-11026069)
chr3 (105-172)||(33156264-33156331)
chr3 (107-172)||(23458251-23458316)
chr3 (105-172)||(9294228-9294295)
chr3 (121-172)||(26463884-26463935)
chr3 (105-172)||(33689649-33689716)
chr3 (105-172)||(43384374-43384441)
chr3 (163-261)||(1741389-1741487)
chr3 (131-172)||(19741188-19741229)
chr3 (196-249)||(21300340-21300393)
chr3 (147-228)||(32716284-32716365)
chr3 (121-177)||(41988048-41988104)
chr3 (161-249)||(55036683-55036771)
chr3 (105-172)||(40758235-40758302)
chr3 (163-261)||(10998157-10998255)
chr3 (126-172)||(40033747-40033793)
chr3 (122-172)||(51994173-51994223)
chr3 (131-172)||(2796270-2796311)
chr3 (131-172)||(8041707-8041748)
chr3 (131-172)||(10770756-10770797)
chr3 (34-79)||(21783621-21783666)
chr3 (131-172)||(36314563-36314604)
chr3 (131-172)||(48322642-48322683)
chr3 (131-172)||(54466514-54466555)
chr3 (196-249)||(55036793-55036846)
chr3 (128-172)||(40506080-40506124)
chr3 (105-172)||(25108365-25108432)
chr3 (122-177)||(44654790-44654845)
chr3 (194-249)||(53037041-53037096)
chr3 (163-249)||(22129020-22129106)
chr3 (106-172)||(25107304-25107370)
chr3 (196-249)||(10749442-10749495)
chr3 (116-177)||(20704608-20704669)
chr3 (196-249)||(21255738-21255791)
chr3 (196-249)||(22129130-22129183)
chr3 (182-219)||(22735403-22735440)
chr3 (131-172)||(46474906-46474947)
chr3 (185-234)||(46670561-46670610)
chr3 (163-260)||(55036953-55037050)
chr3 (121-177)||(39399378-39399434)
chr3 (121-177)||(54317917-54317973)
chr3 (132-172)||(55052545-55052585)
[»] chr4 (84 HSPs)
chr4 (131-266)||(23455657-23455792)
chr4 (147-261)||(23454956-23455070)
chr4 (163-261)||(53477080-53477178)
chr4 (143-258)||(38982576-38982691)
chr4 (182-261)||(54591597-54591676)
chr4 (182-261)||(38813556-38813635)
chr4 (163-260)||(54590146-54590243)
chr4 (182-266)||(56556579-56556663)
chr4 (188-261)||(13336863-13336936)
chr4 (182-267)||(52815659-52815744)
chr4 (182-266)||(38814346-38814430)
chr4 (182-266)||(52816442-52816526)
chr4 (182-261)||(56557344-56557423)
chr4 (188-258)||(22882352-22882422)
chr4 (188-258)||(22934016-22934086)
chr4 (107-177)||(48528558-48528628)
chr4 (193-258)||(9254411-9254476)
chr4 (182-266)||(55013108-55013191)
chr4 (105-173)||(16605692-16605760)
chr4 (105-172)||(35028268-35028335)
chr4 (188-258)||(22881172-22881242)
chr4 (188-258)||(22932836-22932906)
chr4 (105-172)||(14801827-14801894)
chr4 (163-266)||(53559671-53559774)
chr4 (163-261)||(22250017-22250115)
chr4 (85-171)||(54435347-54435433)
chr4 (196-249)||(22249940-22249993)
chr4 (131-172)||(37976449-37976490)
chr4 (127-172)||(50418929-50418974)
chr4 (121-169)||(17356208-17356256)
chr4 (121-177)||(52298112-52298168)
chr4 (194-249)||(8287248-8287303)
chr4 (105-172)||(15507943-15508010)
chr4 (194-261)||(33294458-33294525)
chr4 (121-172)||(34765666-34765717)
chr4 (114-177)||(48529855-48529918)
chr4 (163-266)||(54961428-54961531)
chr4 (131-173)||(4982991-4983033)
chr4 (163-249)||(12691420-12691506)
chr4 (126-172)||(16005929-16005975)
chr4 (126-172)||(44967329-44967375)
chr4 (107-165)||(53129778-53129836)
chr4 (106-172)||(53701903-53701969)
chr4 (131-172)||(9145031-9145072)
chr4 (196-249)||(12691530-12691583)
chr4 (131-172)||(13058128-13058169)
chr4 (131-172)||(18831440-18831481)
chr4 (131-172)||(23613400-23613441)
chr4 (131-172)||(27934623-27934664)
chr4 (131-172)||(32950233-32950274)
chr4 (196-261)||(33294268-33294333)
chr4 (188-249)||(35730970-35731031)
chr4 (131-172)||(36009109-36009150)
chr4 (131-172)||(37248327-37248368)
chr4 (131-172)||(42738296-42738337)
chr4 (131-172)||(43155792-43155833)
chr4 (196-249)||(47862276-47862329)
chr4 (131-172)||(49879472-49879513)
chr4 (196-249)||(53559511-53559564)
chr4 (194-263)||(54961746-54961815)
chr4 (121-173)||(10781770-10781822)
chr4 (121-173)||(24349764-24349816)
chr4 (132-172)||(24711202-24711242)
chr4 (132-172)||(54086992-54087032)
chr4 (194-249)||(37677862-37677917)
chr4 (194-249)||(50246173-50246228)
chr4 (194-261)||(53475833-53475900)
chr4 (163-249)||(8286946-8287032)
chr4 (194-260)||(12691720-12691786)
chr4 (163-261)||(47981920-47982018)
chr4 (131-172)||(5369038-5369079)
chr4 (131-172)||(9400784-9400825)
chr4 (196-249)||(20086644-20086697)
chr4 (131-172)||(22566890-22566931)
chr4 (163-240)||(32846385-32846462)
chr4 (131-172)||(33247538-33247579)
chr4 (196-249)||(34238594-34238647)
chr4 (131-172)||(34837339-34837380)
chr4 (131-172)||(35508536-35508577)
chr4 (131-172)||(38012261-38012302)
chr4 (131-172)||(52909344-52909385)
chr4 (26-78)||(55866333-55866386)
chr4 (194-266)||(22249730-22249802)
chr4 (128-172)||(51692644-51692688)
[»] chr8 (85 HSPs)
chr8 (163-261)||(38598966-38599064)
chr8 (131-267)||(34213760-34213896)
chr8 (163-261)||(1231528-1231626)
chr8 (163-261)||(25288076-25288174)
chr8 (163-261)||(1232799-1232895)
chr8 (186-261)||(7393168-7393243)
chr8 (182-261)||(34665772-34665851)
chr8 (182-266)||(33497635-33497719)
chr8 (123-261)||(34214488-34214627)
chr8 (192-261)||(4463455-4463524)
chr8 (182-258)||(4970130-4970206)
chr8 (182-258)||(34666559-34666635)
chr8 (182-256)||(24379015-24379089)
chr8 (186-258)||(29574747-29574819)
chr8 (183-261)||(27437539-27437617)
chr8 (188-258)||(29575910-29575980)
chr8 (186-258)||(24377186-24377258)
chr8 (190-258)||(36574822-36574890)
chr8 (183-261)||(27436565-27436643)
chr8 (182-259)||(33497020-33497097)
chr8 (105-172)||(16388796-16388863)
chr8 (191-258)||(36576029-36576096)
chr8 (194-261)||(36623354-36623421)
chr8 (163-266)||(36623637-36623740)
chr8 (163-261)||(43866713-43866811)
chr8 (180-249)||(20096325-20096394)
chr8 (127-172)||(23698536-23698581)
chr8 (163-260)||(27857026-27857123)
chr8 (196-249)||(36623560-36623613)
chr8 (107-172)||(36928567-36928632)
chr8 (196-249)||(37342989-37343042)
chr8 (196-249)||(43866835-43866888)
chr8 (106-177)||(2693787-2693859)
chr8 (105-173)||(30711987-30712055)
chr8 (105-173)||(30719764-30719832)
chr8 (163-263)||(41801816-41801916)
chr8 (121-172)||(4405946-4405997)
chr8 (186-221)||(7392250-7392285)
chr8 (126-173)||(12199210-12199257)
chr8 (126-173)||(12443638-12443685)
chr8 (121-172)||(13186151-13186202)
chr8 (163-266)||(25287789-25287892)
chr8 (105-172)||(35756673-35756740)
chr8 (194-261)||(38600265-38600332)
chr8 (194-249)||(40422475-40422530)
chr8 (163-249)||(7677-7763)
chr8 (163-261)||(547433-547530)
chr8 (163-261)||(23424796-23424894)
chr8 (121-171)||(31608799-31608849)
chr8 (126-172)||(38862709-38862755)
chr8 (196-249)||(547642-547695)
chr8 (131-172)||(1425318-1425359)
chr8 (131-172)||(3041721-3041762)
chr8 (221-258)||(4462144-4462181)
chr8 (131-172)||(23663810-23663851)
chr8 (196-249)||(25287916-25287969)
chr8 (107-172)||(36186339-36186404)
chr8 (131-172)||(36325325-36325366)
chr8 (163-264)||(37343066-37343167)
chr8 (131-172)||(38845564-38845605)
chr8 (131-172)||(39071767-39071808)
chr8 (131-172)||(40775915-40775956)
chr8 (131-172)||(44407122-44407163)
chr8 (105-173)||(20385658-20385726)
chr8 (105-173)||(20386700-20386768)
chr8 (105-173)||(30710945-30711013)
chr8 (206-262)||(41802010-41802066)
chr8 (185-240)||(9632351-9632406)
chr8 (116-171)||(22890275-22890330)
chr8 (194-261)||(26740033-26740100)
chr8 (194-261)||(43867026-43867093)
chr8 (163-249)||(29190443-29190529)
chr8 (196-261)||(7588-7653)
chr8 (131-172)||(2266583-2266624)
chr8 (131-172)||(8316884-8316925)
chr8 (196-249)||(11478269-11478322)
chr8 (131-172)||(12273149-12273190)
chr8 (131-172)||(22915654-22915695)
chr8 (196-249)||(23424636-23424689)
chr8 (116-177)||(24085860-24085921)
chr8 (196-249)||(29190366-29190419)
chr8 (131-172)||(35449874-35449915)
chr8 (196-249)||(40525631-40525684)
chr8 (194-266)||(11478142-11478214)
chr8 (105-177)||(31873169-31873241)
[»] chr6 (47 HSPs)
chr6 (163-261)||(33401126-33401224)
chr6 (163-281)||(17784385-17784503)
chr6 (131-267)||(14656476-14656612)
chr6 (123-261)||(4117507-4117645)
chr6 (125-261)||(4116801-4116937)
chr6 (182-257)||(8427384-8427459)
chr6 (182-261)||(33399968-33400047)
chr6 (186-260)||(1661453-1661527)
chr6 (182-261)||(14657228-14657307)
chr6 (163-261)||(13480210-13480308)
chr6 (163-261)||(23291746-23291844)
chr6 (182-261)||(8427202-8427281)
chr6 (163-261)||(5064337-5064435)
chr6 (194-267)||(15819805-15819878)
chr6 (194-261)||(3299874-3299941)
chr6 (105-172)||(21627983-21628050)
chr6 (105-172)||(30803952-30804019)
chr6 (105-172)||(33517625-33517692)
chr6 (105-172)||(33647054-33647121)
chr6 (163-261)||(13480492-13480590)
chr6 (163-261)||(30234876-30234974)
chr6 (163-249)||(32337578-32337664)
chr6 (163-260)||(5064619-5064716)
chr6 (131-172)||(12080727-12080768)
chr6 (196-261)||(20561122-20561187)
chr6 (196-249)||(23291868-23291921)
chr6 (131-172)||(28000650-28000691)
chr6 (131-172)||(30337540-30337581)
chr6 (105-173)||(679956-680024)
chr6 (197-249)||(13480333-13480385)
chr6 (194-261)||(738012-738079)
chr6 (194-249)||(16704624-16704679)
chr6 (194-261)||(23292059-23292126)
chr6 (105-172)||(30725850-30725917)
chr6 (196-262)||(22494004-22494070)
chr6 (131-172)||(363095-363136)
chr6 (116-177)||(1215147-1215208)
chr6 (131-172)||(3059348-3059389)
chr6 (131-172)||(14196880-14196921)
chr6 (131-172)||(17734459-17734500)
chr6 (196-249)||(32337688-32337741)
chr6 (105-173)||(680998-681066)
chr6 (197-249)||(5064542-5064594)
chr6 (163-227)||(20994975-20995039)
chr6 (116-172)||(26463270-26463326)
chr6 (108-172)||(28498298-28498362)
chr6 (108-172)||(29810709-29810773)
[»] scaffold0009 (2 HSPs)
scaffold0009 (161-266)||(262439-262544)
scaffold0009 (163-261)||(261003-261101)
[»] scaffold1493 (3 HSPs)
scaffold1493 (163-261)||(595-693)
scaffold1493 (163-266)||(877-980)
scaffold1493 (196-249)||(800-853)
[»] scaffold0182 (2 HSPs)
scaffold0182 (186-261)||(14400-14475)
scaffold0182 (182-266)||(13131-13215)
[»] scaffold0018 (1 HSPs)
scaffold0018 (182-261)||(73111-73190)
[»] scaffold0008 (1 HSPs)
scaffold0008 (105-172)||(239821-239888)
[»] scaffold0005 (1 HSPs)
scaffold0005 (105-172)||(37833-37900)
[»] scaffold0031 (1 HSPs)
scaffold0031 (108-172)||(69056-69120)
[»] scaffold0220 (1 HSPs)
scaffold0220 (93-172)||(23322-23401)
[»] scaffold0206 (1 HSPs)
scaffold0206 (163-266)||(10322-10425)
[»] scaffold0020 (1 HSPs)
scaffold0020 (131-173)||(139762-139804)
[»] scaffold0559 (1 HSPs)
scaffold0559 (131-172)||(1324-1365)
[»] scaffold0321 (1 HSPs)
scaffold0321 (196-249)||(10786-10839)
[»] scaffold0027 (1 HSPs)
scaffold0027 (105-177)||(14060-14132)
[»] scaffold0024 (1 HSPs)
scaffold0024 (131-172)||(141859-141900)
[»] scaffold0007 (1 HSPs)
scaffold0007 (131-172)||(1860-1901)
[»] scaffold0279 (1 HSPs)
scaffold0279 (163-249)||(10867-10953)
[»] scaffold0295 (1 HSPs)
scaffold0295 (131-172)||(2234-2275)
[»] scaffold0205 (1 HSPs)
scaffold0205 (131-172)||(21234-21275)
[»] scaffold0201 (1 HSPs)
scaffold0201 (163-227)||(14177-14241)


Alignment Details
Target: scaffold0347 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 266
Target Start/End: Original strand, 14440 - 14696
Alignment:
Q  11 ccagagaagtgaagt-agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttcgcaactcatttaaccaataaacagagccac 109  Q
    ||||||||||||||| |  |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14440 ccagagaagtgaagtgaaggaaggagggaagattttgagaagatggacacaggggtataatggtcttttcgcaactcatttaaccaataaacagagccac 14539  T
Q  110 gtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttca 209  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  14540 gtcagctaatcagtgatgtggcagtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatgggaggattagtaagctca 14639  T
Q  210 gggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  14640 gggatgaaaaatcaaatggcctataattgaaggaatgaaatgcatatttaagtcttt 14696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 13740 - 13611
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcct 231  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  13740 agtgattaagtggggagagggacgaaatcttaaatgattaatttttataggggcaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcct 13641  T
Q  232 ataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||||||||||||||||    
T  13640 ataattgcagggatgaaatgcatatttaag 13611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 4e-72; HSPs: 103)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 63 - 260
Target Start/End: Original strand, 25065858 - 25066055
Alignment:
Q  63 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 162  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||    
T  25065858 ggtataatggttttttcgcaactcatttaacaaataaatagagccacgtcagctaatcagtgaggtggcagtgattaagtggagagagggacgaaatctt 25065957  T
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    |||||||||||||||| | ||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  25065958 aaatgattaatttttacaggggtaaaatggaaggattagtaagctcagggatgaaaaatcaaatggcttataattatagggatgaaatgcatatttaa 25066055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 121 - 260
Target Start/End: Complemental strand, 25065075 - 25064936
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||| ||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| ||||||||||||||    
T  25065075 agtgacgtggcagtgatcaagtgaggagagggacgaaatcttaaatgattaatttttatagggacagaatgggaggattagtaagatcagggatgaaaaa 25064976  T
Q  221 tcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||  ||||||||||||||||||||||||||||||||    
T  25064975 tcaaattacctataattgcagggatgaaatgcatatttaa 25064936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 13295267 - 13295137
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| ||||| || |||||||||||||||||| | ||||||||||| |||||||||||| |||||| |||||||||||||| ||    
T  13295267 cagtgattaaccgggaagagggacgacattttaaatgattaatttttacaagggcaaaatggaaggattagtaagctcaggggtgaaaaatcaaatgacc 13295168  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| ||||| |||||||||||||||||    
T  13295167 tataattacaggggtgaaatgcatatttaag 13295137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 123 - 258
Target Start/End: Original strand, 46282753 - 46282888
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| |||||||||||||||||||||||||||||    
T  46282753 tgatgtggcagtgattatccgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggatgaaaaatc 46282852  T
Q  223 aaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||| ||||||||||| ||||||||||| ||||||||    
T  46282853 aaacggcctataattacagggatgaaaagcatattt 46282888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 49093141 - 49093043
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| |  ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| ||||||    
T  49093141 aaatgattagtaattacatgggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatgtttaag 49093043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 32619465 - 32619389
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  32619465 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 32619389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 32238779 - 32238704
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||    
T  32238779 ggcaaaatgggaggattagtaagttcagggatgaaatttcaaatagcctatatttgcagggatgaaatgcatattt 32238704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 50062968 - 50063043
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  50062968 ggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 50063043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 32622375 - 32622451
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||  |||||||    
T  32622375 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 32622451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 46282152 - 46282073
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||||||||  ||||||||||    
T  46282152 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaaacatatttaag 46282073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 258
Target Start/End: Original strand, 6345630 - 6345732
Alignment:
Q  156 aaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcata 255  Q
    |||| ||||||| ||||| |||  | ||||||||||| |||||||||||||||||||||||||  ||||||| ||  |||||||||||||||||||||||    
T  6345630 aaattttaaatgcttaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcata 6345729  T
Q  256 ttt 258  Q
    |||    
T  6345730 ttt 6345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 191 - 261
Target Start/End: Original strand, 13295608 - 13295678
Alignment:
Q  191 gggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13295608 gggagggttagtaagctcagagatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaag 13295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 2828293 - 2828190
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  |  |||||||| | |||||||||||||| | |||||||||||||||||  ||||||||||| ||||||||||||||||||||     
T  2828293 aaatgattaatatttgcagaggcaaaatagaaggattagtaagtttatggatgaaaaatcaaatgatctataattgcaaggatgaaatgcatatttaagc 2828194  T
Q  263 cttt 266  Q
    ||||    
T  2828193 cttt 2828190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 51935218 - 51935297
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| || |||||||| |||||||||||    
T  51935218 gggcaaaatgggaggattagaaagctcagggatgaaaaatcaaatgacatataattacatggatgaaaagcatatttaag 51935297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 6344336 - 6344260
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||| ||  ||||| ||||||||||||||||||||    
T  6344336 gggcaaaatgggaggattagtaagttcatggatgaaatttcaaatgacccctaattacagggatgaaatgcatattt 6344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 34850335 - 34850407
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||| ||||    
T  34850335 gccacgtcagctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaatttt 34850407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 25065797 - 25065846
Alignment:
Q  26 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtct 75  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  25065797 agtgaaggagggaagattttgagaagatgaacacaggggtataatggtct 25065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 37578462 - 37578530
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  37578462 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaat 37578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 2829539 - 2829644
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaa-------atcaaatggcctataattgcagggatgaaatgcata 255  Q
    ||||||||||| |||  | ||| |||||||||||||||||||| ||| |||||||||       |||||||| |||||||||| ||||||||||||||||    
T  2829539 aaatgattaatatttgcaggggtaaaatgggaggattagtaagctcaaggatgaaaaatcaaatatcaaatgacctataattgtagggatgaaatgcata 2829638  T
Q  256 tttaag 261  Q
    ||||||    
T  2829639 tttaag 2829644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 24009811 - 24009878
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  24009811 gccacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 24009878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 266
Target Start/End: Original strand, 24701573 - 24701656
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    |||||||||| ||||||||||| |||||||| ||||| ||||||||| |||| ||||||||||||||  | |||||||| ||||    
T  24701573 ggcaaaatggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcagggatgaaagacctatttaagccttt 24701656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 36380253 - 36380181
Alignment:
Q  195 ggattagtaagttcaggg-atgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||||| |||| | ||||  |||||| ||||||| |||||||||||||||||||||||||||||||    
T  36380253 ggattagtaagttaaggggaagaaatttcaaattgcctatatttgcagggatgaaatgcatatttaagtcttt 36380181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 14879129 - 14879062
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  14879129 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 14879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 32917402 - 32917351
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32917402 agtgatgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 32917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 225
Target Start/End: Original strand, 49093832 - 49093875
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 225  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  49093832 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaa 49093875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 52563731 - 52563656
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||||||||  ||| ||||||||   |||||  |||||| |||||||||||||||||||||||    
T  52563731 ggcaaaatgggaggattagtaacctcaaggatgaaattccaaataccctatatttgcagggatgaaatgcatattt 52563656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 2953748 - 2953846
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  2953748 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 2953846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 258
Target Start/End: Original strand, 36381451 - 36381517
Alignment:
Q  192 ggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||| |||| |||  |||||| ||||||| ||||||||||||||| |||||||    
T  36381451 ggaggattagtaagttcaaggataaaatttcaaatagcctatatttgcagggatgaaatacatattt 36381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1841591 - 1841550
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  1841591 cagtgattaagtggggagagtgacgaaattttaaatgattaa 1841550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 5183790 - 5183871
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaggga 244  Q
    ||||||||||| |||  | ||||||| ||| |||||| |||| |||||||| ||||| |||||||||||||| |||||||||    
T  5183790 aaatgattaatatttgcaggggcaaattggaaggattcgtaacttcagggacgaaaattcaaatggcctatatttgcaggga 5183871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 6367718 - 6367653
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  6367718 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 6367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 1103596 - 1103552
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  1103596 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 1103552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 4960698 - 4960631
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  4960698 gccacgtcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 4960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 5926619 - 5926524
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  |||||||    
T  5926619 aaatgattaatgtttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatattt 5926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 10019657 - 10019728
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  10019657 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggatgaaaattcaaatgacctata 10019728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 10304060 - 10304009
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304060 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaaatttt 10304009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10304146 - 10304197
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  10304146 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 10304197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 28534820 - 28534894
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| |||||||||||||||||||||||||  ||||||| |||||| || || | | ||||||||||||||||    
T  28534820 aaaatggaaggattagtaagttcagggatgaaatttcaaatgccctatatttaca-gaacgaaatgcatatttaag 28534894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 29043070 - 29043137
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||| || ||||  ||||||||||    
T  29043070 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaag 29043137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 34849160 - 34849097
Alignment:
Q  114 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||| |||| ||| ||||||||||| |||||||| |||||||| |||||||||||| ||||    
T  34849160 gctaatcggtgacgtggcagtgattaagaggggagagggacgaaattttaaatgattaaatttt 34849097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 40210656 - 40210707
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  40210656 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 40210707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 46163188 - 46163121
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||| ||||||||||||||| |||||||| ||||||||||||    
T  46163188 gccacgtcatcaaattagtgacatgacagtaattaagtggggagagagacgaaattttaaatgattaa 46163121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 48691293 - 48691242
Alignment:
Q  118 atcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 169  Q
    |||||||| ||| |||||||||||||||||||||||| |||| |||||||||    
T  48691293 atcagtgacgtggcagtgattaagtggggagagtgacaaaattttaaatgat 48691242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 1047488 - 1047586
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| || ||||| ||||||| |||||| || |||||||||||  ||||||||||    
T  1047488 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatgacctatatttacagggatgaaagacatatttaag 1047586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 5926837 - 5926891
Alignment:
Q  195 ggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||||| |||||||||||||| |||||||| ||||| ||||||||| ||||    
T  5926837 ggattagtaacttcagggatgaaaattcaaatggtctatatttgcagggacgaaa 5926891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 19755689 - 19755775
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||| |||| ||||||| |||||| ||||||||| ||||    
T  19755689 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggataaaaattcaaatgacctatatttgcagggacgaaa 19755775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 25414944 - 25414846
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| || ||||| |||||||||||||| ||| ||||| ||||  ||||||||||    
T  25414944 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagaagaaaattcaaatggcctatatttgtagggacgaaagacatatttaag 25414846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 31514582 - 31514624
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  31514582 cagtgattaagtggggagagggacgaaattttaaatgattaat 31514624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 37152822 - 37152920
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| || ||||| |||||||| ||||| ||||||||| ||||  ||||||||||    
T  37152822 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatggactatatttgcagggacgaaagacatatttaag 37152920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 46849942 - 46850028
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||||| ||| ||||| ||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||    
T  46849942 aaatgattaatatttgcaggggcaaattggaaggatcagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 46850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 183487 - 183528
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  183487 cagtgattaagtggggagagggacgaaattttaaatgattaa 183528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 4716733 - 4716774
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  4716733 cagtgattaagtggggagagagacgaaattttaaatgattaa 4716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 6056500 - 6056553
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  6056500 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 6056553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 9443731 - 9443658
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| |||||  ||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  9443731 gccacgtcagctaatctagtgacttgacaatgattaagtggggggagggaccaaattttaaatgattaaatttt 9443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 12577272 - 12577219
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  12577272 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 12577219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 13245997 - 13245936
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| |||| ||||||| ||||    
T  13245997 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagtgattaaatttt 13245936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 13914339 - 13914404
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||| ||||||||||| |||||||| ||||||||||||    
T  13914339 cacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaa 13914404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 24905432 - 24905473
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  24905432 cagtgattaagtggggagagggacgaaattttaaatgattaa 24905473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 25648016 - 25647975
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  25648016 cagtgattaagtggggagagggacgaaattttaaatgattaa 25647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 27999121 - 27999206
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaat 190  Q
    ||||| ||||| ||| ||||| ||| ||||||||||||||| |||| |||||||| | |||||||||| |||| ||  ||||||||    
T  27999121 gccacatcagcaaattagtgaggtggcagtgattaagtgggaagagagacgaaatttaaaatgattaaattttgtagtggcaaaat 27999206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 28011495 - 28011454
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28011495 cagtgattaagtggggagagggacgaaattttaaatgattaa 28011454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 29042879 - 29042932
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||| ||||||||    
T  29042879 gattagtaacttcagggatgaaaattcaaatgacctatatttgcaaggatgaaa 29042932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33442859 - 33442900
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33442859 cagtgattaagtggggagagggacgaaattttaaatgattaa 33442900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36694544 - 36694585
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36694544 cagtgattaagtggggagagagacgaaattttaaatgattaa 36694585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36710645 - 36710686
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36710645 cagtgattaagtggggagagagacgaaattttaaatgattaa 36710686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 42248605 - 42248564
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42248605 cagtgattaagtggggagagggacgaaattttaaatgattaa 42248564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 42267434 - 42267389
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||    
T  42267434 agtgattaagtggggagagagacgaaatattaaatgattaaatttt 42267389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 46364835 - 46364782
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  46364835 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 46364782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 49002976 - 49002879
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||  |||||||||    
T  49002976 aaatgattaatatttgcaggggcagattggaaggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 49002879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 6056693 - 6056761
Alignment:
Q  194 aggattagtaagtt-cagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| || |||||||||||| ||||||||| |||| ||||||||| ||||  ||||||||||    
T  6056693 aggattagtaacttacagggatgaaaattcaaatggcttatatttgcagggacgaaagacatatttaag 6056761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 16970834 - 16970878
Alignment:
Q  134 tgattaagtggggagagtgacgaaatcttaaatgattaattttta 178  Q
    ||||||||||||||||| |||||||| |||||||||||| |||||    
T  16970834 tgattaagtggggagagggacgaaattttaaatgattaaatttta 16970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 50062282 - 50062246
Alignment:
Q  184 gcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||||||| |||||||||||||||||||||||||||    
T  50062282 gcaaaatggaaggattagtaagttcagggatgaaaaa 50062246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 739319 - 739216
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| ||| ||||| |||||||| ||||| ||||||||| ||||  | ||||||||     
T  739319 aaatgattaatatttgcaggggcatattggaaggattagtaacttcaaggacgaaaattcaaatggtctatatttgcagggacgaaaaacctatttaagc 739220  T
Q  263 cttt 266  Q
    ||||    
T  739219 cttt 739216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 17662136 - 17662187
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  17662136 agtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaa 17662187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 172
Target Start/End: Complemental strand, 40772637 - 40772598
Alignment:
Q  133 gtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  40772637 gtgattaagtggggagagggacgaaattttaaatgattaa 40772598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 41098891 - 41098824
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||||||  ||||||||||||||||| | ||| |||| ||||||||||||    
T  41098891 gccacgtcatcaaattagtgatgtggtagtgattaagtggggagggggacaaaattttaaatgattaa 41098824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43758980 - 43758913
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  43758980 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 43758913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 44523406 - 44523473
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||||| ||| |||||||||||||  | ||| || ||||| ||||||||||||    
T  44523406 gccacgtcagctaattagtgacgtggcagtgattaagtgaagggagggatgaaattttaaatgattaa 44523473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 1040398 - 1040300
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||  |||| ||||||||| |||| ||||| ||| ||||  ||||||||||    
T  1040398 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaag 1040300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 1040422 - 1040476
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaat 250  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||| |||||||||||    
T  1040422 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaat 1040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 1047304 - 1047206
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||  |||| ||||||||| |||| ||||| ||| ||||  ||||||||||    
T  1047304 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaattcaaatggcttatatttgcaaggacgaaagacatatttaag 1047206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 1047328 - 1047382
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaat 250  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||| |||||||||||    
T  1047328 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaat 1047382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 33347516 - 33347418
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| ||| || ||||| | ||| || |||||||| |||||||| ||||  ||||||| | |||| ||||||||| ||||  ||||||||||    
T  33347516 aaatgattaatatttgtaggggcagattggaagaattagtaacttcagggacgaaagttcaaatgacttatatttgcagggacgaaagacatatttaag 33347418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 33347673 - 33347623
Alignment:
Q  199 tagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  33347673 tagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 33347623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 33347700 - 33347786
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||    
T  33347700 aaatgattaatatttgcaagggcagattggaaggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaa 33347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 46545015 - 46545097
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggat 245  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||| ||||  ||||||| |||||| || |||||||    
T  46545015 aaatgattaatatttgcagtggcaaaatggaaggattagtaacttcagggacgaaacttcaaatgacctatatttacagggat 46545097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 19017901 - 19017966
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||| | ||||||||||||||| |||| ||| |||| ||||||||||||    
T  19017901 cacgtcatcaaattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaa 19017966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 19515951 - 19515910
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| |||||| |||||    
T  19515951 cagtgattaagtggggagagggacgaaattttaaataattaa 19515910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 21444741 - 21444680
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  21444741 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 21444680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 22103787 - 22103848
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||| ||||| |||||||| |||| ||||||| ||||    
T  22103787 taattagtgacgtggcagtgattaagtggagagagggacgaaattttaagtgattaaatttt 22103848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 26024555 - 26024514
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||| | ||||||||||||    
T  26024555 cagtgattaagtggggagagggacgaacttttaaatgattaa 26024514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 26953361 - 26953308
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||    
T  26953361 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaa 26953308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 29980922 - 29980999
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| ||| |||| ||||| ||||||| |||||| |||||    
T  29980922 aaatgattaatatttgcaggggcaaattggaaggattagtaacttccgggacgaaaattcaaatgacctatatttgca 29980999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 30711459 - 30711418
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  30711459 cagtgattaagtggggcgagggacgaaattttaaatgattaa 30711418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34464745 - 34464786
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  34464745 cagtgattaagtggggagagggacaaaattttaaatgattaa 34464786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 35152475 - 35152434
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  35152475 cagtgattaagtggggagagggacaaaattttaaatgattaa 35152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 47999388 - 47999429
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||||| || ||||||||||||    
T  47999388 cagtgattaagtggggagagggacgatattttaaatgattaa 47999429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 49003135 - 49003082
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| | ||| ||||||| |||||| ||||||||||||||    
T  49003135 gattagtaacttcagggacggaaattcaaatgacctatatttgcagggatgaaa 49003082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 52134200 - 52134159
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  52134200 cagtgattaagtggggagagggacgaaattttaaacgattaa 52134159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 52455015 - 52454950
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| || ||||||||||| ||||||| |||||  ||||||||| ||||| | ||||||||    
T  52455015 gattagtaactttagggatgaaaattcaaatgacctatttttgcagggacgaaatacctatttaag 52454950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 29980897 - 29980845
Alignment:
Q  197 attagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||| || ||||| ||||| ||||||| |||||| ||||||||||||||    
T  29980897 attagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaa 29980845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 35152613 - 35152681
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| | ||| |||||||||||||||||||||| ||   |  |||||||| |||||||||||||    
T  35152613 gccacgtcatcgaattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaat 35152681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 258
Target Start/End: Original strand, 52564954 - 52565046
Alignment:
Q  166 tgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||| ||| ||  |||||||||| || ||||||||  | ||||| ||||  ||||| | |||||| |||||||||||| ||||||||||    
T  52564954 tgattaatatttgtagtggcaaaatggaagaattagtaatcttagggaagaaatttcaaacgccctatatttgcagggatgacatgcatattt 52565046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 121 - 261
Target Start/End: Complemental strand, 38643692 - 38643552
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaa 220  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||| ||||||||||    
T  38643692 agtgacgtgacagtaattaagtggggagagggacgaaatcttaaatgattaatttttacaggagcaaaatgggaggattagtaaggtcaaggatgaaaaa 38643593  T
Q  221 tcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38643592 tcaaatggcctataattgcagggatgaaatgcatatttaag 38643552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 63 - 261
Target Start/End: Original strand, 38644571 - 38644758
Alignment:
Q  63 ggtataatggtcttttcgcaactcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatctt 162  Q
    |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||           |||||||||||||||| || ||||||||    
T  38644571 ggtataatggtctttttgcaactcatttaaccattaaacagagtcacgtcagctaatcagt-----------gattaagtggggagagggatgaaatctt 38644659  T
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||| | || |||||||| ||||||| |||| | |||||| |||||||||||| |||||||||||| | ||||||||||||||||||    
T  38644660 aaatgattaatttttacaaggtcaaaatggaaggattaataagcttagggataaaaaatcaaatgacctataattgcaagaatgaaatgcatatttaag 38644758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 45915750 - 45915911
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaa 204  Q
    ||||||||||||||||||||| ||| ||||||||||  ||  |||| |||| ||| |||||||||||||||||| | ||| ||||| |||||||||||||    
T  45915750 gccacgtcagctaatcagtgacgtggcagtgattaatcggaaagagggacggaattttaaatgattaatttttacaggggtaaaataggaggattagtaa 45915849  T
Q  205 gttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  45915850 gcttagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaagccttt 45915911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 123 - 261
Target Start/End: Original strand, 4227132 - 4227270
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  ||  |||| |||||||| ||||||| |||||||||| | || ||||||||||||||||||||| ||| ||||||||||||    
T  4227132 tgatgtggcagtgattaaccggaaagagggacgaaattttaaatggttaatttttacagggacaaaatgggaggattagtaagctcaaggatgaaaaatc 4227231  T
Q  223 aaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4227232 aaatggcctataattacagggatgaaatgcatatttaag 4227270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 266
Target Start/End: Complemental strand, 12643232 - 12643097
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||  | ||| |||||||||||||||||||| |||| |||||||||||||||||||    
T  12643232 cagtgattaatcgggaagagggacgaaattttaaatggttaatttttgcaggggtaaaatgggaggattagtaagctcagagatgaaaaatcaaatggcc 12643133  T
Q  231 tataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||| ||||||||||||||||||||||| ||||    
T  12643132 tataattacagggatgaaatgcatatttaagccttt 12643097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 47558166 - 47558027
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 226  Q
    ||||||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||    
T  47558166 gtgacagtgattaatcgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaaactcagggatgaaaaatcaaat 47558067  T
Q  227 ggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
     ||||||||||  || ||||||||||||||||||| ||||    
T  47558066 agcctataattaaagagatgaaatgcatatttaagccttt 47558027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 12644101 - 12644231
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | | | |||||||||||||||||||| ||||||||||||||||||||||||    
T  12644101 cagtgattaaccgggaagagggacgaaattttaaatgattaatttttacaggagtaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 12644200  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    | |||||  ||||||||||||||||||||||    
T  12644201 tgtaattatagggatgaaatgcatatttaag 12644231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 4226257 - 4226127
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||  |||||||| |||||||||||||||||| | ||||||||||| |||||||||||| ||| || |||| ||||||||||||    
T  4226257 cagtgattaaccgggaagaaggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagctcatggttgaagaatcaaatggcc 4226158  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| |||||||||||||||||||||||    
T  4226157 tataattacagggatgaaatgcatatttaag 4226127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 7158331 - 7158233
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||| | ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7158331 aaatgattaatatttacaggggcaaaatggaaggattagtaagttcatggatgaaaaatcaaatggcctataattgtagggatgaaatgcatatttaag 7158233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 12929387 - 12929289
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  12929387 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatagcctatatttgcagggatgaaatgcatatttaag 12929289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 12930872 - 12930774
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12930872 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaag 12930774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 45914656 - 45914528
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||| ||| ||||||||| | ||||||||||||||||||||||    
T  45914656 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttaca-gggcaaaatgagag-attagtaagcttagggatgaaaaatcaaatggcc 45914559  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| ||| |||||||||||||||||||    
T  45914558 tataattacagagatgaaatgcatatttaag 45914528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 37284190 - 37284106
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||    
T  37284190 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaagccttt 37284106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 37289329 - 37289413
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||    
T  37289329 gggcaaaatgggaggattagtaagctcagggatgaaaaaccaaatggcctataattacagggatgaaaagcatatttaagccttt 37289413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 27480119 - 27479989
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||| |||||||||||||| ||||||||||||||||||  ||||    
T  27480119 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaagcggcc 27480020  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||||| |||||||||||    
T  27480019 tataattgcagggatgaaaagcatatttaag 27479989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 22661438 - 22661362
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  22661438 gggcaaaatggaaggattagtaagttcaaggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 22661362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 31695637 - 31695709
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||| |||||||||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  31695637 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 31695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 27480766 - 27480845
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||  ||| ||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  27480766 gggcaaaatggaaggattagtaaaatcaaggatgaaaaatcaaacggcctataattacagggatgaaaaacatatttaag 27480845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 31694546 - 31694476
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||| || ||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  31694546 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattt 31694476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 43123451 - 43123398
Alignment:
Q  26 agtgaaggagggaagattttgagaagatgaacacagaggtataatggtcttttc 79  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  43123451 agtgaaggagggaagattttaagaagatgaacacatgggtataatggtcttttc 43123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 2640448 - 2640515
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  2640448 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 2640515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 5457177 - 5457244
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  5457177 gccacgtcagctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 5457244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 32053429 - 32053480
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  32053429 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 32053480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 37563657 - 37563736
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| ||| ||||||||||| |||||||| ||||| |||||||||||||| || |||||| ||||  ||||||||||    
T  37563657 gggcaaattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttacagggacgaaagacatatttaag 37563736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 15827981 - 15827916
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  15827981 gattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 15827916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 26825890 - 26825825
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||| | ||||||||    
T  26825890 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaatacctatttaag 26825825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Original strand, 40022551 - 40022623
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||| |||||||||||| ||||||||||||  |||||| | ||||| ||||||||||||||| |||||||    
T  40022551 caaaatggaaggattagtaagatcagggatgaaatttcaaat-gactatatttgcagggatgaaatacatattt 40022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 7159235 - 7159315
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||||||||||| |||||| | ||||| |||||||  ||||| |||||||||||||   |||||||||| ||||    
T  7159235 aaaatgggaggattagtaacttcaggaacgaaaattcaaatgatctatatttgcagggatgaatgacatatttaagccttt 7159315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 23181264 - 23181331
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||| ||||| |||||||| ||||||||||||    
T  23181264 gccacgtcatcaaattagtgacatgacagtgattaagtggagagagggacgaaattttaaatgattaa 23181331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 24388977 - 24388910
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | |||  |||||||| |||||||||||||||||||| |||||||| |||| |||||||    
T  24388977 gccacgtcatcaaattggtgatgtggcagtgattaagtggggagagggacgaaattttaagtgattaa 24388910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 28469278 - 28469345
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  28469278 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 28469345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 37563423 - 37563356
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| |||||||||||||| |||||||||  |||  ||||||||||    
T  37563423 aggattagtaaattcagggacgaaaattcaaatggcctatatttgcagggacaaaagacatatttaag 37563356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 40379927 - 40379860
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| || ||||||||||||||||| |||||||| ||||||||||||    
T  40379927 gccacgtcatcaaattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaa 40379860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 12931022 - 12931108
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  ||||||| | ||| ||||||||||| |||||||| ||||| ||||||| || ||| ||||||||| ||||    
T  12931022 aaatgattaatatttgcatgggcagattggaaggattagtaacttcagggacgaaaattcaaatgaccaatatttgcagggacgaaa 12931108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 43937994 - 43937896
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||| || || ||| ||||  ||||||||||    
T  43937994 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttacaaggacgaaagacatatttaag 43937896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 43938178 - 43938276
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||||| |||| ||||| ||| ||||  ||||||||||    
T  43938178 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcttatatttgcaaggacgaaagacatatttaag 43938276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 3914294 - 3914229
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||| || |||| |||||||| ||||||||||||    
T  3914294 cacgtcatcaaattagtgatgtggcagtgattaagttggaagagggacgaaattttaaatgattaa 3914229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6571149 - 6571104
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| ||| |||| ||||||||||||    
T  6571149 gtgacagtgattaagtggggagagggacaaaattttaaatgattaa 6571104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 17102152 - 17102111
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  17102152 cagtgattaagtggggagagggacgaaattttaaatgattaa 17102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 27396891 - 27396932
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27396891 cagtgattaagtggggagagggacgaaattttaaatgattaa 27396932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27991871 - 27991830
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27991871 cagtgattaagtggggagagggacgaaattttaaatgattaa 27991830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 30948425 - 30948466
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30948425 cagtgattaagtggggagagggacgaaattttaaatgattaa 30948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 32680860 - 32680901
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32680860 cagtgattaagtggggagagggacgaaattttaaatgattaa 32680901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 34454740 - 34454687
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  34454740 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 34454687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 37563614 - 37563561
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  37563614 gattagtaacttcagggacgaaaattcaaatgccctatatttgcagggatgaaa 37563561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 42731551 - 42731510
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42731551 cagtgattaagtggggagagggacgaaattttaaatgattaa 42731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 45010900 - 45010941
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  45010900 cagtgattaagtggggagagagacgaaattttaaatgattaa 45010941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 22539252 - 22539308
Alignment:
Q  94 caataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagag 150  Q
    |||| ||||| || |||||||||||| ||||| |||| |||||||||||||||||||    
T  22539252 caatcaacagtgctacgtcagctaataagtgacgtgagagtgattaagtggggagag 22539308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10935952 - 10935885
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||| ||||| |||||||| ||||||||||||    
T  10935952 gccacgtcatcaaattagtgacatggcagtgattaagtggagagagggacgaaattttaaatgattaa 10935885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 177
Target Start/End: Complemental strand, 11397531 - 11397464
Alignment:
Q  110 gtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||| ||||| |||||||||||||| ||||  ||| ||| |||| |||||||||||| ||||    
T  11397531 gtcagctaattagtgacgtgacagtgattaattgggatgagagactaaattttaaatgattaaatttt 11397464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 26825730 - 26825627
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| ||||||| |||||| || |||||| ||||  ||||||||||     
T  26825730 aaatgattaatctttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 26825631  T
Q  263 cttt 266  Q
    ||||    
T  26825630 cttt 26825627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 40021571 - 40021496
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||| | || ||||| ||||| | ||||||||  ||||||| |||||| || ||||||||||||||||||||    
T  40021571 ggcaaaatagaagaattagcaagtttatggatgaaatttcaaatgacctatatttacagggatgaaatgcatattt 40021496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 47121411 - 47121466
Alignment:
Q  206 ttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||| ||||| ||||||| |||||| |||||||||||||| || ||||||||    
T  47121411 ttcagggacgaaaattcaaatgacctatatttgcagggatgaaaggcctatttaag 47121466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 27558136 - 27558222
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||  ||| ||||| ||||||| |||||| ||||||||| ||||    
T  27558136 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaa 27558222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 43938154 - 43938100
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaat 250  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||| |||||||||||    
T  43938154 gattagtaacttcagggacgaaaattcaaatgacctatatttgtagggatgaaat 43938100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 5636102 - 5636045
Alignment:
Q  187 aaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcaggga 244  Q
    |||||| ||||||||||| || ||||| ||||| ||||||| |||||| |||||||||    
T  5636102 aaatggaaggattagtaactttagggacgaaaattcaaatgacctatatttgcaggga 5636045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 12929514 - 12929461
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||    
T  12929514 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 12929461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 22871573 - 22871614
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22871573 cagtgattaagtggggagagggaagaaattttaaatgattaa 22871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 32299001 - 32299042
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| || |||||||||    
T  32299001 cagtgattaagtggggagagggacgaaattttcaatgattaa 32299042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 34454798 - 34454867
Alignment:
Q  197 attagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    |||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||  | |||||||| ||||    
T  34454798 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaagtcctatttaagccttt 34454867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34928915 - 34928956
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34928915 cagtgattaagtggggagagggacgaaattttaaacgattaa 34928956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 37657010 - 37656949
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaat 166  Q
    ||||||||| | ||| ||||| ||| | |||||||||||||||||| |||||||| ||||||    
T  37657010 gccacgtcatcaaattagtgacgtgccggtgattaagtggggagagggacgaaattttaaat 37656949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 39686799 - 39686840
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  39686799 cagtgattaagtggggagagggacgaaattttaaacgattaa 39686840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 45010730 - 45010689
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  45010730 cagtgattaagtggggagatggacgaaattttaaatgattaa 45010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 12928106 - 12928034
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| || ||||| ||||| |||| ||||||||| |||||| || ||||  |||||||||| ||||    
T  12928106 aggattagtaactttagggacgaaaattcaagtggcctatatttgcagcgacgaaagacatatttaagccttt 12928034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 13311323 - 13311375
Alignment:
Q  125 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| |||||||||||| ||||||| |||||||| |||||| ||||| ||||    
T  13311323 atgtggcagtgattaagtcgggagagggacgaaattttaaattattaaatttt 13311375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 22870430 - 22870560
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22870430 cagtgattaatcgggaagagagacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22870529  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| |||||||||||||||||||||||    
T  22870530 tataattacagggatgaaatgcatatttaag 22870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 131 - 256
Target Start/End: Complemental strand, 22869737 - 22869612
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| ||||||| |||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22869737 cagtgattaaccgggaagagggacgaaattttaaatggttaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 22869638  T
Q  231 tataattgcagggatgaaatgcatat 256  Q
    ||||||| || |||||||||||||||    
T  22869637 tataattacaaggatgaaatgcatat 22869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 20857064 - 20856934
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  20857064 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcc 20856965  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| ||||||||||| |||||||||||    
T  20856964 tataattacagggatgaaaagcatatttaag 20856934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 14744730 - 14744833
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||     
T  14744730 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacatataattgcagggatgaaatgcatatttaagc 14744829  T
Q  263 cttt 266  Q
    ||||    
T  14744830 cttt 14744833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 31108008 - 31107933
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31108008 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 31107933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 123 - 258
Target Start/End: Complemental strand, 36476905 - 36476770
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||    
T  36476905 tgatgtggcagtgattatctgggaagagggacgaactttcaaatgattagtaattacaagggcaaaatgggaggattagtaagctcagggatgaaaaatc 36476806  T
Q  223 aaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  36476805 aaacggcctataattgcagggatgaaaagcatattt 36476770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 20857515 - 20857645
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||| ||||| | |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  20857515 cagtgattaaccgggaagagggacgaaatttcaaatgattaacttttacaggggcaaaatgggaggattagtaagcttaggaatgaaaaatcaaacggcc 20857614  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| || |||||||| |||||||||||    
T  20857615 tataattacatggatgaaaagcatatttaag 20857645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 36477356 - 36477471
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagg 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||    
T  36477356 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcatggatgaaaaatcaaacggcctataattgcagg 36477455  T
Q  243 gatgaaatgcatattt 258  Q
    ||||||| ||||||||    
T  36477456 gatgaaaagcatattt 36477471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 21978971 - 21979069
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||| ||||||||||| | ||  ||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21978971 aaattattaatttttacagggataaaataggaggattagtaagttcgaggatgaaaaatcaaatggcttataattgcagggatgaaatgcatatttaag 21979069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 39181138 - 39181054
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||| ||||    
T  39181138 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcttataattacagggatgaaaagcatatttaagccttt 39181054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 20072888 - 20072967
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||||||    
T  20072888 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggatgaaaagcatatttaag 20072967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 20072253 - 20072123
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||||||||  |||| |||| |||||| | | ||||||||| |  ||| | ||||||||||  |||||||||||||||||||||||||||||||| ||||    
T  20072253 cagtgattatctgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcc 20072154  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| ||| ||||||| |||||||||||    
T  20072153 tataattacagagatgaaaagcatatttaag 20072123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 16532974 - 16532898
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  16532974 gggcaaaatggaaggattaataagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 16532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 21978036 - 21978112
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  21978036 gggcaaagtgggaggattagtaagctcagggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 21978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 261
Target Start/End: Complemental strand, 8654185 - 8654109
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||||||  ||||||||||    
T  8654185 caaaatgggaggattagtaagctcatggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaag 8654109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 8673777 - 8673853
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||| ||||| ||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||    
T  8673777 gggcaaaatgggagaattagcaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 8673853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 16533644 - 16533723
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  16533644 gggcaaaatggaaggattaataagttcagagatgaaaaatcaaacggcctataattatagggatgaaaagcatatttaag 16533723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 39181815 - 39181894
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||  ||||||||||    
T  39181815 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacgacctataattacagggattaaaaacatatttaag 39181894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 31108338 - 31108434
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| |||| | ||  ||||||| | |||||||||||||| |||||||||||||||| | ||||| ||||||||||||||| |||||||||    
T  31108338 aaatgattaatatttacagggataaaatggaaagattagtaagttcatggatgaaaaatcaaat-gtctatatttgcagggatgaaatacatatttaa 31108434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 21972168 - 21972095
Alignment:
Q  184 gcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||| |||||| |||||||||||  |||||||    
T  21972168 gcaaaatgggaggattagtaagctgagg-atgaaaaatcaaatggcccataattacagggatgaaaaacatattt 21972095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 25253186 - 25253088
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||  ||||||||||    
T  25253186 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaag 25253088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 25316976 - 25316878
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||  ||||||||||    
T  25316976 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaagacatatttaag 25316878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 39402148 - 39402210
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaa 225  Q
    ||||||||||| |||  | ||||||||||||||||||||||||| ||||||||||||||||||    
T  39402148 aaatgattaatatttgcaggggcaaaatgggaggattagtaagtccagggatgaaaaatcaaa 39402210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14848976 - 14849049
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14848976 gccacgtcagctaatctagtgatgtggcagtgattaagtggggtgagggaccaaattttaaatgattaaatttt 14849049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 13963022 - 13962955
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  13963022 gccacgtcatcaaattagtgacgtgacagtgattaagtgaggagagggacgaaattttaaatgattaa 13962955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 19892578 - 19892645
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  19892578 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaa 19892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 33735382 - 33735315
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| |||||||||||||||||||| ||| ||||| ||||  ||||||||||    
T  33735382 aggattagtaatttcagggacgaaaaatcaaatggcctatatttgtagggacgaaagacatatttaag 33735315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 35512290 - 35512239
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  35512290 agtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 35512239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 38442226 - 38442159
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38442226 gccacgtcatcaaattagttatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38442159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 14745548 - 14745462
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| ||||||| |||||| ||||||||| ||||    
T  14745548 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatgacctatatttgcagggacgaaa 14745462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 21260965 - 21260879
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||    
T  21260965 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 21260879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 32052508 - 32052606
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  32052508 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32052606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 29646634 - 29646699
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  29646634 cacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 29646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 32242398 - 32242333
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  32242398 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 32242333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 8322539 - 8322495
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  8322539 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 8322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 35920477 - 35920521
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||    
T  35920477 tgacagtgattaagtggggagagggacgaaattttaaatgattaa 35920521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 5024304 - 5024355
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| ||||||||||||||||||||  ||||||| ||||||||||||    
T  5024304 agtgatgtggcagtgattaagtggggagaggaacgaaattttaaatgattaa 5024355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 11047595 - 11047528
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  11047595 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagagacgaaattttaaatgattaa 11047528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 13362498 - 13362565
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||||||  |||||||||||||||||||| ||| |||| ||||||||||||    
T  13362498 gccacgtcatcaaattagtgatgtagcagtgattaagtggggagagagactaaattttaaatgattaa 13362565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 25253401 - 25253468
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  25253401 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25253468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 25317192 - 25317259
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  25317192 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 25317259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 33735597 - 33735700
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  | ||||||||     
T  33735597 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 33735696  T
Q  263 cttt 266  Q
    ||||    
T  33735697 cttt 33735700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39453458 - 39453391
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39453458 gccacgtcatcaaattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaa 39453391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 18934793 - 18934715
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||  ||||||||||| |||| ||| ||||| ||||||| | |||| ||||||||||||||  ||||||||||    
T  18934793 ggcaaaatgaaaggattagtaacttcatggacgaaaattcaaatgacttatatttgcagggatgaaagacatatttaag 18934715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 31119019 - 31118969
Alignment:
Q  199 tagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||| ||||    
T  31119019 tagtaacttcagggatgaaaattcaaatggcctatatttgcagggacgaaa 31118969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 38475290 - 38475336
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38475290 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38475336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 297279 - 297320
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  297279 cagtgattaagtggggagagggacgaaattttaaatgattaa 297320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 3529138 - 3529179
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3529138 cagtgattaagtggggagagggacgaaattttaaatgattaa 3529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 5994021 - 5993980
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  5994021 cagtgattaagtggggagagggacgaaattttaaatgattaa 5993980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 6421882 - 6421829
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  6421882 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 6421829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 6758130 - 6758171
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6758130 cagtgattaagtggggagagggacgaaattttaaatgattaa 6758171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 7015575 - 7015522
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||||||| ||||    
T  7015575 gattagtaacttcatggatgaaaattcaaatggcctatatttgcagggacgaaa 7015522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14194719 - 14194760
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14194719 cagtgattaagtggggagagggacgaaattttaaatgattaa 14194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 18013736 - 18013789
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  18013736 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 18013789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28269684 - 28269725
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28269684 cagtgattaagtggggagagggacgaaattttaaatgattaa 28269725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28771134 - 28771175
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28771134 cagtgattaagtggggagagggacgaaattttaaatgattaa 28771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 31482667 - 31482708
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  31482667 cagtgattaagtggggagagggacgaaattttaaatgattaa 31482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 33735573 - 33735520
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  33735573 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 33735520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 41930648 - 41930607
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  41930648 cagtgattaagtggggagagggacgaaattttaaatgattaa 41930607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 12904896 - 12904840
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| |||||| ||||||||||||||||| |||||||| |||||| ||||| ||||    
T  12904896 agtgacgtgacattgattaagtggggagagggacgaaattttaaattattaaatttt 12904840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10684097 - 10684030
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  |||||||||||||||| ||| |||||| |||| ||||||||||||    
T  10684097 gccacgtcatcaaattagtgacatgacagtgattaagtgaggaaagtgacaaaattttaaatgattaa 10684030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 32052293 - 32052226
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| || |||||| ||||  ||||||||||    
T  32052293 aggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaaaacatatttaag 32052226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 37945094 - 37945023
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| ||||||| ||||||    
T  37945094 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgacctata 37945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 6150583 - 6150545
Alignment:
Q  134 tgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  6150583 tgattaagtggggagagggacgaaattttaaatgattaa 6150545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 8323136 - 8323070
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||||| ||||||||||| |||| ||| ||||| ||||||| |||||| ||  ||||||||||    
T  8323136 ggcaaaatggaaggattagtaacttcatggacgaaaattcaaatgacctatatttatagggatgaaa 8323070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 14745597 - 14745683
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| || ||||| |||||||||||||| ||| ||||| ||||    
T  14745597 aaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaattcaaatggcctatatttgtagggacgaaa 14745683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 24547412 - 24547462
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| ||| ||||| |||||||||||||| |||||||| ||||||||||||    
T  24547412 gtgacgtggcagtggttaagtggggagagggacgaaattttaaatgattaa 24547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1506099 - 1506058
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  1506099 cagtgattaagtggggagagggacgaaattttaaacgattaa 1506058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 12990912 - 12990965
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||    
T  12990912 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 12990965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 13064533 - 13064586
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||    
T  13064533 gattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 13064586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 25253210 - 25253263
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||    
T  25253210 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaa 25253263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27587280 - 27587239
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  27587280 cagtgattaaatggggagagggacgaaattttaaatgattaa 27587239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 32052484 - 32052431
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||    
T  32052484 gattagtaacttcagggacgaaaattcaaatgaactatatttgcagggatgaaa 32052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 186550 - 186510
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||| |||||||| ||||||||||||    
T  186550 agtgattaagtggggggagggacgaaattttaaatgattaa 186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 41339611 - 41339547
Alignment:
Q  199 tagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtc 263  Q
    |||||| |||||||| ||||| |||||||  ||||| ||||||||| ||||  ||||||||||||    
T  41339611 tagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacatatttaagtc 41339547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 4e-44; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 25623420 - 25623290
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25623420 cagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcc 25623321  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    |||||||  ||||||||||||||||||||||    
T  25623320 tataattatagggatgaaatgcatatttaag 25623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 123 - 261
Target Start/End: Original strand, 25624393 - 25624531
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  ||| |||| |||||||| |||||||||||||||||| | ||| |||||||||||||||||||| ||||||||||||||||    
T  25624393 tgatgtggcagtgattaaccgggtagagggacgaaattttaaatgattaatttttacaggggaaaaatgggaggattagtaagctcagggatgaaaaatc 25624492  T
Q  223 aaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||| ||||||||| |||||||||||||||||||||||    
T  25624493 aaatgacctataattacagggatgaaatgcatatttaag 25624531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 24387451 - 24387353
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24387451 aaatgattaatttttacatggacaaaatgggaggattagtaagctcagggatgaaaaattaaatggcctataattgcagggatgaaatgcatatttaag 24387353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 24388255 - 24388354
Alignment:
Q  162 taaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||| |  |||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  24388255 taaatgattaatttttacaatggcaaaatggaaggattagtaagctcagggatgaaaaatcaaattgcttataattgcagggatgaaatgcatatttaag 24388354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 20101851 - 20101772
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  20101851 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacagggatgaaaagcatatttaag 20101772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 20982605 - 20982521
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  20982605 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccttt 20982521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 29957898 - 29957814
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  29957898 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccttt 29957814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 29958515 - 29958645
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  ||||| ||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  29958515 cagtgattaaccgggaagagagacgaactttcaaatgattagtaattataggggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacagcc 29958614  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| |||||||||||  ||||||||||    
T  29958615 tataattacagggatgaaaaacatatttaag 29958645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 180 - 261
Target Start/End: Original strand, 20103161 - 20103242
Alignment:
Q  180 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||    
T  20103161 atgggcaaaatgggaggattagtaagctcagggatgaaaaatctaatggcctataattacagggataaaaagcatatttaag 20103242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 20983280 - 20983359
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||||    
T  20983280 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggtctataattacagggatgaaaagcatatttaag 20983359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 43236577 - 43236509
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||    
T  43236577 tgggaggattagtaagttcagggatgaaatttcaaatggcctatatttgcagggataaaatgcatattt 43236509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 256
Target Start/End: Original strand, 19620793 - 19620886
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatat 256  Q
    ||||||||||| |||  | ||||||||||| |||||||||||||||||||||||||  ||||||| |||||| ||| ||||| |||||||||||    
T  19620793 aaatgattaatatttgcaggggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacctatatttgtagggacgaaatgcatat 19620886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 43237747 - 43237815
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||||||||||| |||  |||||||||||||| |||||||||  ||||||||||||    
T  43237747 tgggaggattagtaagttcagggataaaatttcaaatggcctatatttgcagggacaaaatgcatattt 43237815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 10446932 - 10446834
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  10446932 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 10446834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 36755249 - 36755184
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  36755249 cacgtcatcaaattagtgacgtgacagtgattaagtggggagagagacgaaattttaaatgattaa 36755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 16367247 - 16367333
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||    
T  16367247 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 16367333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 7981120 - 7981051
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattta 259  Q
    ||||||||||||||||||| |||||||||  ||||||| |||||| |||||||||  |||||||| ||||    
T  7981120 tgggaggattagtaagttcggggatgaaatttcaaatgacctatagttgcagggagaaaatgcattttta 7981051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 11721371 - 11721432
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| |||||||| |||| ||||||| ||||    
T  11721371 taattagtgacgtgacagtgattaagtggggagagagacgaaattttaagtgattaaatttt 11721432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 33882892 - 33882973
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtct 264  Q
    ||||||||||||||||||||||  |||   ||||||  ||||||| | |||| ||||||||||||||||||||||| |||||    
T  33882892 ggcaaaatgggaggattagtaacctcatatatgaaatttcaaatgccttatatttgcagggatgaaatgcatattttagtct 33882973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 37895619 - 37895684
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37895619 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37895684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 258
Target Start/End: Original strand, 7983837 - 7983905
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||||||  |||||||  ||||||| |||||| |||| | ||||||||||||||||    
T  7983837 tgggaggattagtaagttcatagatgaaatttcaaatgacctatatttgctgagatgaaatgcatattt 7983905  T

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Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 275
Target Start/End: Complemental strand, 16367063 - 16366951
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| || |||||| ||||  ||||||||||     
T  16367063 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacagggacgaaagacatatttaagc 16366964  T
Q  263 ctttctctaatta 275  Q
    |||| || |||||    
T  16366963 ctttttcaaatta 16366951  T

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Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 21103150 - 21103087
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||||||||||||||||||| |||| ||||||||||     |||||||| ||||||||||||    
T  21103150 aggattagtaagttcagggatgaaaaaccaaacggcctataat-----ggatgaaaagcatatttaagt 21103087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 1150006 - 1149939
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||| | ||||||||    
T  1150006 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaatacctatttaag 1149939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 15848230 - 15848179
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  15848230 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 15848179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 17266535 - 17266484
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||| ||||    
T  17266535 tgtgacagtgattaagtggggagagggaccaaattttaaatgattaaatttt 17266484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 20911230 - 20911127
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  | ||||||||     
T  20911230 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacctatttaagc 20911131  T
Q  263 cttt 266  Q
    ||||    
T  20911130 cttt 20911127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 172
Target Start/End: Original strand, 25893468 - 25893555
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||| || ||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||||  ||||| | ||||||||||||    
T  25893468 tcatttgactaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggagagaaacgaatttttaaatgattaa 25893555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 32519224 - 32519157
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  32519224 aggattagtaatttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 32519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 33881655 - 33881580
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||| |||| |||  | ||||||||||  ||||||| |||||| || ||||||||||||||||||||    
T  33881655 ggcaaaatgggagaattaataaccttagggatgaaatttcaaatgccctatatttacagggatgaaatgcatattt 33881580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 36382319 - 36382252
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  36382319 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaa 36382252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 39423673 - 39423606
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  39423673 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 39423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 177
Target Start/End: Complemental strand, 10840624 - 10840562
Alignment:
Q  115 ctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||||| ||||||||||||||||||| |||| |||||||  |||||||||||| ||||    
T  10840624 ctaattagtgacgtgacagtgattaagtgggaagagggacgaaagtttaaatgattaaatttt 10840562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 1696001 - 1696046
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||    
T  1696001 gtgacagtgattaagtggggagagggacgaaattttaaacgattaa 1696046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 6658010 - 6657969
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  6658010 cagtgattaagtggggagagggacgaaattttaaatgattaa 6657969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 11163319 - 11163360
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  11163319 cagtgattaagtggggagagggacgaaattttaaatgattaa 11163360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14900748 - 14900789
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14900748 cagtgattaagtggggagagggacgaaattttaaatgattaa 14900789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 16099187 - 16099146
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  16099187 cagtgattaagtggggagagggacgaaattttaaatgattaa 16099146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 32519279 - 32519332
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  32519279 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 32519332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 33739835 - 33739794
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  33739835 cagtgattaagtggggagagggacgaaattttaaatgattaa 33739794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 34447968 - 34447904
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  34447968 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagagacgaaat-ttaaattattaa 34447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 39498442 - 39498401
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39498442 cagtgattaagtggggagagggacgaaattttaaatgattaa 39498401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 44714057 - 44714098
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44714057 cagtgattaagtggggagagggacgaaattttaaatgattaa 44714098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 1150252 - 1150324
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||| | ||||  |||||||||| ||||    
T  1150252 aggattagtaatttcagggacgaaaattcaaatgacctatatttgcaggcacgaaagacatatttaagccttt 1150324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 9694048 - 9694112
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||    
T  9694048 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaa 9694112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 17266624 - 17266672
Alignment:
Q  129 gacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||||| ||||||||| |||||||||||| ||||    
T  17266624 gacaatgattaagtggggagaatgacgaaattttaaatgattaaatttt 17266672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 23206428 - 23206496
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatg 251  Q
    ||||||||| |||||||||||| |||| ||||||||  ||||||| |||||| |||||  |||||||||    
T  23206428 ggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgcaaagatgaaatg 23206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 23678032 - 23678100
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatg 251  Q
    ||||||||| |||||||||||| |||| ||||||||  ||||||| |||||| |||||  |||||||||    
T  23678032 ggcaaaatgagaggattagtaacttcaaggatgaaatttcaaatgccctatatttgcaaagatgaaatg 23678100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 6573719 - 6573656
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggag 148  Q
    |||||| |||||| ||||| ||||||||||||||| || || ||| ||||||||||| ||||||    
T  6573719 tcatttgaccaattaacagcgccacgtcagctaattagggacgtggcagtgattaaggggggag 6573656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 10712881 - 10712814
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| || ||||| ||||||||||||    
T  10712881 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaa 10712814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 22731847 - 22731914
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||| |||||| |||| ||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  22731847 aggaatagtaacttcacggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 22731914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 37985031 - 37985098
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaat 250  Q
    |||||| ||| ||||||||||| ||||| || ||||||||||||| | |||| ||||||||| |||||    
T  37985031 ggcaaattggaaggattagtaatttcagagacgaaaaatcaaatgacatatatttgcagggacgaaat 37985098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 18476976 - 18476910
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| ||||||||  |||| ||||||| |||||| ||||||||| |||| || |||||||    
T  18476976 aggattagtaacttcagggacaaaaattcaaatgacctatagttgcagggacgaaaggcctatttaa 18476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 2318314 - 2318249
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| || | ||||||||||||||| |||||||| ||||||||||||    
T  2318314 cacgtcatcaaattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaa 2318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 6573182 - 6573137
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| |||||||| |||||| | ||||||||||||    
T  6573182 gtgacagtgattaaggggggagagggacgaatttttaaatgattaa 6573137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 11349477 - 11349550
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttata 180  Q
    |||||||||||||||  || ||| || ||||||| ||||  ||| |||||||| |||||||||||| |||||||    
T  11349477 cacgtcagctaatcaaagacgtggcactgattaactgggttgagggacgaaattttaaatgattaaattttata 11349550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 11689688 - 11689627
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| |||||||||||||||||||  |||||||| |||| ||||||| ||||    
T  11689688 taattagtgacgtggcagtgattaagtggggagatggacgaaattttaagtgattaaatttt 11689627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 13995938 - 13995979
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  13995938 cagtgattaagtggggagagggacgaaattttaaacgattaa 13995979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 22731792 - 22731739
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| || ||||| ||||| ||||||| |||||| ||||||||||||||    
T  22731792 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaa 22731739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33062315 - 33062356
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||||||||  |||||||||||    
T  33062315 cagtgattaagtggggagagggacgaaattataaatgattaa 33062356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 36479850 - 36479809
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  36479850 cagtgattaagtggggagatggacgaaattttaaatgattaa 36479809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 41248824 - 41248865
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  41248824 cagtgattaagtggggagagggacgaaattttaaacgattaa 41248865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 32519470 - 32519542
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||| | ||||| ||||||| | |||| ||||||||| ||||  |||||||||| ||||    
T  32519470 aggattagtaacttcaggaacgaaaattcaaatgacttatatttgcagggacgaaagacatatttaagccttt 32519542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 44044272 - 44044204
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  44044272 gccatgtcagctaatcagtgacgtggcagtaattaattgggctcagggacgaaattttaaatgattaat 44044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 127 - 266
Target Start/End: Original strand, 29192957 - 29193096
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaat 226  Q
    ||||||||||||||  ||| |||| ||| |||| |||||| ||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||    
T  29192957 gtgacagtgattaatcgggaagagggacaaaattttaaataattaatttttacaggggcgaaatgggaggattagtaagctcagggatgaaaaatcaaat 29193056  T
Q  227 ggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  29193057 ggcctataattacagggatgaaatgcatatttaagccttt 29193096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 131 - 261
Target Start/End: Original strand, 32717073 - 32717203
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    |||| ||||| |||| |||| |||||||| |||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  32717073 cagtaattaattgggaagagggacgaaattttaaatgattaatttttacaggggcaaaatggaaggattagtaagtttagggatgaaaaatcaaatgacc 32717172  T
Q  231 tataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| |||||||||||||||||||||||    
T  32717173 tataattacagggatgaaatgcatatttaag 32717203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 258
Target Start/End: Complemental strand, 29192167 - 29192040
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| |||||||||||||||||| | |||||||| || |||||||||||| ||||| ||||||||||||||||||    
T  29192167 cagtgattaatcgggaagagggacgaaattttaaatgattaatttttacaggggcaaaacggaaggattagtaagctcaggaatgaaaaatcaaatggcc 29192068  T
Q  231 tataattgcagggatgaaatgcatattt 258  Q
    ||||||| ||||||||||||||||||||    
T  29192067 tataattacagggatgaaatgcatattt 29192040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 37249319 - 37249204
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagg 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||    
T  37249319 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattaataagctcagggatgaaaaatcaaacggcctataattgcagg 37249220  T
Q  243 gatgaaatgcatattt 258  Q
    ||||||| ||||||||    
T  37249219 gatgaaaagcatattt 37249204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 45279303 - 45279382
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  45279303 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 45279382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 44476130 - 44476054
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||  |||||||    
T  44476130 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcccataattacagggatgaaaaacatattt 44476054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 2944045 - 2943915
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  2944045 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctca-ggatgaaaaatcaaacggcc 2943947  T
Q  231 tataattgcagggat-gaaatgcatatttaag 261  Q
    ||||||||||||||| |||| |||||||||||    
T  2943946 tataattgcagggatagaaaagcatatttaag 2943915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 2944685 - 2944764
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  2944685 gggcaaaatggatggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 2944764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 11026651 - 11026730
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  11026651 gggcaaaatggaaggattggtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 11026730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 22736709 - 22736788
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||    
T  22736709 gggcaaaatgggaggattagtaagctcagggatgaaaaatcaaatgacctataattacagggatgaaaaacatatttaag 22736788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 44481972 - 44482048
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  44481972 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatggcccataattacagggatgaaaagcatattt 44482048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 45278625 - 45278549
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  45278625 gggcaaaatggaaggattagtaaattcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatattt 45278549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 48188459 - 48188383
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||    
T  48188459 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaaacatattt 48188383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 48189118 - 48189202
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| ||||    
T  48189118 gggcaaaatggaaggattagtaagctcagggatgaaaaatcaaacggcctataattacaaggatgaaaagcatatttaagccttt 48189202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 1757323 - 1757402
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||  ||||||||||    
T  1757323 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaag 1757402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 37249817 - 37249892
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||    
T  37249817 gggcagaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgca-ggatgaaaagcatattt 37249892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 43105853 - 43105920
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  43105853 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaa 43105920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 1756631 - 1756564
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| || ||||||||    
T  1756631 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacaaggatgaaa 1756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 43105314 - 43105235
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||  ||||||||||    
T  43105314 gggcaaaatgaaaggattagtaagttcagggatgaaaaatcaaacggcctataattacaaggatgtaaaacatatttaag 43105235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 11026069 - 11025963
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | ||||||||| |  |||||  |||||||||| |||||||||||||||||||||||||||||||| |||     
T  11026069 cagtgattaaccgggaagagggacgaactttcaaatgattagtaattatagaggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggct 11025970  T
Q  231 tataatt 237  Q
    |||||||    
T  11025969 tataatt 11025963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 33156264 - 33156331
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| ||||||||||||    
T  33156264 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaa 33156331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 23458251 - 23458316
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23458251 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 23458316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 9294228 - 9294295
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  9294228 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaa 9294295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 26463884 - 26463935
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26463884 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgattaa 26463935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 33689649 - 33689716
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  33689649 gccacgtcatcgaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 33689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 43384441 - 43384374
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  ||||||||||||||||||||||| |||||||| ||||||||||||    
T  43384441 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagagacgaaattttaaatgattaa 43384374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 1741487 - 1741389
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  1741487 aaatgattaatatttgcaagggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 1741389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 19741188 - 19741229
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  19741188 cagtgattaagtggggagagtgacgaaattttaaatgattaa 19741229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 21300393 - 21300340
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||    
T  21300393 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 21300340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 32716365 - 32716284
Alignment:
Q  147 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatgg 228  Q
    |||| |||||||| ||||||| |||||||||| | ||| |||||| ||||||||||||  ||| |||| |||||||||||||    
T  32716365 agagggacgaaattttaaatggttaatttttacaagggtaaaatgagaggattagtaaactcaaggataaaaaatcaaatgg 32716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 41988104 - 41988048
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||| ||||    
T  41988104 agtgatgtggcagtgattaagtgaggagagagacgaaattttaaatgattaaatttt 41988048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 249
Target Start/End: Complemental strand, 55036771 - 55036683
Alignment:
Q  161 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||||| |||  | ||||| | ||| ||||||||||| |||||| ||||||| ||||||| |||||| ||||||||| ||||    
T  55036771 ttaaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaatgaaaattcaaatgacctatatttgcagggacgaaa 55036683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 40758302 - 40758235
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| |||  ||||||||||||||||||| |||||||| ||||||||||||    
T  40758302 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaa 40758235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 10998157 - 10998255
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| |||||| || ||||  ||||||||||    
T  10998157 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagagacgaaaaacatatttaag 10998255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 40033747 - 40033793
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  40033747 tgtgacagtgattaagtggggagagggacaaaattttaaatgattaa 40033793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 51994173 - 51994223
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  51994173 gtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 51994223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2796311 - 2796270
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  2796311 cagtgattaagtggggagagggacgaaattttaaatgattaa 2796270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 8041748 - 8041707
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  8041748 cagtgattaagtggggagagggacgaaattttaaatgattaa 8041707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 10770756 - 10770797
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  10770756 cagtgattaagtggggagagggacgaaattttaaatgattaa 10770797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 21783666 - 21783621
Alignment:
Q  34 agggaagattttgagaagatgaacacagaggtataatggtcttttc 79  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  21783666 agggaagattttaagaagatgaacacatgggtataatggtcttttc 21783621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36314563 - 36314604
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36314563 cagtgattaagtggggagagggacgaaattttaaatgattaa 36314604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 48322642 - 48322683
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  48322642 cagtgattaagtggggagagggacgaaattttaaatgattaa 48322683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 54466555 - 54466514
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  54466555 cagtgattaagtggggagagggacgaaattttaaatgattaa 54466514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 55036793 - 55036846
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  55036793 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 55036846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 40506080 - 40506124
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| |||||| |||||||| ||||||||||||    
T  40506080 tgacagtgattaagtgcggagagagacgaaattttaaatgattaa 40506124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 25108365 - 25108432
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||| ||| |||||||||| || |  ||  |||||||| ||||||||||||    
T  25108365 gccacgtcagctaatcagtgacgtggcagtgattaactgtgatgaaggacgaaattttaaatgattaa 25108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 177
Target Start/End: Original strand, 44654790 - 44654845
Alignment:
Q  122 gtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| |||||||||||||| ||||||||| |||||||| |||| ||||||| ||||    
T  44654790 gtgacgtgacagtgattaaatggggagagggacgaaattttaagtgattaaatttt 44654845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 53037096 - 53037041
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| || |||||||||||    
T  53037096 aggattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaa 53037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 22129106 - 22129020
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| ||||| || ||||| |||||| ||||||| || | |||||||||    
T  22129106 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagtgacgaaaattcaaatagcctatatttacggggatgaaa 22129020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 25107370 - 25107304
Alignment:
Q  106 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||| ||| ||| |||||||||| || |  ||| |||||||| ||||||||||||    
T  25107370 ccacgtcagctaatcactgacgtggcagtgattaactgtgatgagggacgaaattttaaatgattaa 25107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 10749442 - 10749495
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| | ||||| |||||| ||||||||||||||    
T  10749442 gattagtaacttcagggacgaaaatttaaatgacctatatttgcagggatgaaa 10749495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 20704608 - 20704669
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||||| ||||||||||||| |||| |||||||| |||| ||||||| ||||    
T  20704608 taattagtgacgtgactgtgattaagtgggaagagggacgaaattttaagtgattaaatttt 20704669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 21255791 - 21255738
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||| ||||||| ||||||| | |||| ||||||||||||||    
T  21255791 gattagtaacttcaggaatgaaaattcaaatgacttatatttgcagggatgaaa 21255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 22129130 - 22129183
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| || |||||||||||    
T  22129130 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaa 22129183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 22735440 - 22735403
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaa 219  Q
    |||||||||||||||||||||||| | |||||||||||    
T  22735440 gggcaaaatgggaggattagtaagcttagggatgaaaa 22735403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 46474947 - 46474906
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  46474947 cagtgattaagtggggagagggacaaaattttaaatgattaa 46474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 46670561 - 46670610
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctata 234  Q
    |||||||| || |||||||| |||||||||||||| ||||||| ||||||    
T  46670561 caaaatggaagaattagtaacttcagggatgaaaattcaaatgacctata 46670610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 55036953 - 55037050
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| | | ||||| ||||||| |||||| ||||||||| ||||  |||||||||    
T  55036953 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaagaacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 55037050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 39399378 - 39399434
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||| ||||||||| || ||||| |||||||||||| ||||    
T  39399378 agtgacgtggcagtgattaactggggagagagatgaaattttaaatgattaaatttt 39399434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 54317917 - 54317973
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||| | ||||||| |||||||| |||||||||||| ||||    
T  54317917 agtgacgtggcagtgattaattagggagagagacgaaattttaaatgattaaatttt 54317973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 55052545 - 55052585
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| ||||||||| |||||||| ||||||||||||    
T  55052545 agtgattaaatggggagagggacgaaattttaaatgattaa 55052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 266
Target Start/End: Original strand, 23455657 - 23455792
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||||| | |||||||||||||||| |  ||||||||||||||||||||||| ||||| ||||||||||||||| ||    
T  23455657 cagtgattaatcgggaagagggacgaaatttgaaatgattaatttttacagtggcaaaatgggaggattagtaagctcaggaatgaaaaatcaaatgacc 23455756  T
Q  231 tataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||| ||||||||||||||||||||||| ||||    
T  23455757 tataattacagggatgaaatgcatatttaagccttt 23455792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 23455070 - 23454956
Alignment:
Q  147 agagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatg 246  Q
    |||| |||| ||| |||||||  ||||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  23455070 agagggacggaattttaaatgggtaatttttacaggggcaaaatgggatgattagtaagctcagggatgaaaaatcaaatggcctataattacagggatg 23454971  T
Q  247 aaatgcatatttaag 261  Q
    |||||||||||||||    
T  23454970 aaatgcatatttaag 23454956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 53477080 - 53477178
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  53477080 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcagagatgaaaaatcaaatgacctataattgcagagatgaaatgcatatttaag 53477178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 38982576 - 38982691
Alignment:
Q  143 ggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagg 242  Q
    |||||||| |||||| | | ||||||||| |  ||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  38982576 ggggagagggacgaactttcaaatgattagtaattacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaaacggcctataattgcagg 38982675  T
Q  243 gatgaaatgcatattt 258  Q
    ||||||| ||||||||    
T  38982676 gatgaaaagcatattt 38982691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 54591597 - 54591676
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  54591597 gggcaaaatgggaggtttagtaagttcagggatgaaaaatcaaatgatctataattgcagggatgaaatgcatatttaag 54591676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 38813635 - 38813556
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  38813635 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 38813556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 54590243 - 54590146
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| ||| ||  |||||||||| || |||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  54590243 aaatgattaatatttgtagaggcaaaatggaagaattagtaagttcaaagatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaa 54590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 56556663 - 56556579
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  56556663 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaagccttt 56556579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 261
Target Start/End: Original strand, 13336863 - 13336936
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||    
T  13336863 aatgggaggattagtaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatatttaag 13336936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 182 - 267
Target Start/End: Complemental strand, 52815744 - 52815659
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtctttc 267  Q
    ||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||| |||||    
T  52815744 gggcaaaatgaaaggattagtaagttcagggataaaaaatcaaacggcctataattacagggatgaaaagcatatttaagcctttc 52815659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 38814346 - 38814430
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| || |||||||| ||||||||||| ||||    
T  38814346 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctaaaattacaaggatgaaaagcatatttaagccttt 38814430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 52816442 - 52816526
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||  |||||||||| ||||    
T  52816442 gggcaaaatggaaggattagtaagttcagagatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaagccttt 52816526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 56557344 - 56557423
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||  |||||||||| |||||||||||    
T  56557344 gggcaaaatggaaggattagtaagttcatggatgaaaaatcaaacggcctataattagagggatgaaaagcatatttaag 56557423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22882352 - 22882422
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  22882352 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22882422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 22934016 - 22934086
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||| |||||||||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  22934016 aatgggaggattattaagttcagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 22934086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 177
Target Start/End: Complemental strand, 48528628 - 48528558
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||||||||||||||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  48528628 cacgtcagctaatcagtgatgtgacagtgattaagtggggataggaacgaaattttaaatgattaaatttt 48528558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 258
Target Start/End: Complemental strand, 9254476 - 9254411
Alignment:
Q  193 gaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||    
T  9254476 gaggattagtaagttcaaggatgaaatttcaaatggcctatatttgcagggatgaaatgcatattt 9254411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 55013108 - 55013191
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||| || |||||||| ||||||||||| ||||    
T  55013108 gggcaaactgggaggattagtaagctcagg-atgaaaaatcaaatagcctataattacatggatgaaaagcatatttaagccttt 55013191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 16605760 - 16605692
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||| ||||| ||| |||||||||||||||| ||| |||||||| |||||||||||||    
T  16605760 gccacgtcagctaattagtgacgtggcagtgattaagtggggggagggacgaaattttaaatgattaat 16605692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 35028268 - 35028335
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35028268 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaa 35028335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 22881242 - 22881172
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| || ||||||||||||||||||||    
T  22881242 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22881172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 22932906 - 22932836
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||| | ||| |||||||  |||||||||||||| || ||||||||||||||||||||    
T  22932906 aatgggaggattagtaaatgcagagatgaaatttcaaatggcctatatttacagggatgaaatgcatattt 22932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 14801894 - 14801827
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  14801894 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 14801827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 53559671 - 53559774
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||     
T  53559671 aaatgattaatatttgcaggggcagattggaacgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 53559770  T
Q  263 cttt 266  Q
    ||||    
T  53559771 cttt 53559774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 22250017 - 22250115
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  22250017 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 22250115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 54435347 - 54435433
Alignment:
Q  85 tcatttaaccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    |||||| |||||| ||||| || |||||||||||| |||||||||  |||||||||| ||| |||| |||||||| |||||| ||||    
T  54435347 tcatttgaccaattaacagtgcgacgtcagctaattagtgatgtgttagtgattaagggggaagagggacgaaattttaaataatta 54435433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 22249993 - 22249940
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||    
T  22249993 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 22249940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 37976449 - 37976490
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  37976449 cagtgattaagtggggagagtgacgaaattttaaatgattaa 37976490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 50418929 - 50418974
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  50418929 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 50418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 17356208 - 17356256
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgat 169  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  17356208 agtgacgtgacagtgattaagtggggagagggacgaaattttaaatgat 17356256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 52298168 - 52298112
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||| ||||    
T  52298168 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaaatttt 52298112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 8287248 - 8287303
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||    
T  8287248 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 8287303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 15507943 - 15508010
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| | | |||||||||||||||||||| |||||||| ||||||||||||    
T  15507943 gccacgtcatcaaattagtgacgcggcagtgattaagtggggagagagacgaaattttaaatgattaa 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 33294458 - 33294525
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| |||||| ||||||| ||||||||| ||||  ||||||||||    
T  33294458 aggattagtaacttcagggacgaaaattcaaattgcctatatttgcagggaggaaagacatatttaag 33294525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 34765666 - 34765717
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  34765666 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 34765717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 48529855 - 48529918
Alignment:
Q  114 gctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||| ||| |||||||||||||| ||||| ||| |||| |||||||||||| ||||    
T  48529855 gctaatcagtgacgtggcagtgattaagtggagagagggacaaaattttaaatgattaaatttt 48529918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 54961531 - 54961428
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| ||||  | ||||||||     
T  54961531 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaagacctatttaagc 54961432  T
Q  263 cttt 266  Q
    ||||    
T  54961431 cttt 54961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 4982991 - 4983033
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  4982991 cagtgattaagtggggagagggacgaaattttaaatgattaat 4983033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 12691506 - 12691420
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| ||| || || || | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||| ||| ||||    
T  12691506 aaatgattaatatttgtagggacagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcatggacgaaa 12691420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 16005975 - 16005929
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  16005975 tgtgacagtgattaagtagggagagggacgaaattttaaatgattaa 16005929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 44967329 - 44967375
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  44967329 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 44967375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 53129778 - 53129836
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaa 165  Q
    ||||||| | ||| ||||||||| |||||||||||||||||||| |||||||| |||||    
T  53129778 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaa 53129836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 53701969 - 53701903
Alignment:
Q  106 ccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||| | ||| ||||| ||| |||||||||||||||||||| || ||||| ||||||||||||    
T  53701969 ccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaa 53701903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9145031 - 9145072
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  9145031 cagtgattaagtggggagagggacgaaattttaaatgattaa 9145072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 12691530 - 12691583
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  12691530 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 12691583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 13058169 - 13058128
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  13058169 cagtgattaagtggggagagggacgaaattttaaatgattaa 13058128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 18831481 - 18831440
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  18831481 cagtgattaagtggggagagagacgaaattttaaatgattaa 18831440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 23613441 - 23613400
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23613441 cagtgattaagtggggagagggacgaaattttaaatgattaa 23613400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 27934664 - 27934623
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  27934664 cagtgattaagtggggagagggacgaaattttaaatgattaa 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 32950274 - 32950233
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  32950274 cagtgattaagtggggagagagacgaaattttaaatgattaa 32950233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 33294268 - 33294333
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| ||| |||| ||||| ||||||| |||||| ||||||||||||||  ||||||||||    
T  33294268 gattagtaacttccgggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaag 33294333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 35730970 - 35731031
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||| ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||    
T  35730970 aatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaa 35731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 36009109 - 36009150
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36009109 cagtgattaagtggggagagggacgaaattttaaatgattaa 36009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 37248368 - 37248327
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  37248368 cagtgattaagtggggagagcgacgaaattttaaatgattaa 37248327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 42738296 - 42738337
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  42738296 cagtgattaagtggggagagggacgaaattttaaatgattaa 42738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 43155792 - 43155833
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  43155792 cagtgattaagtggggagagggacgaaattttaaatgattaa 43155833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 47862276 - 47862329
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  47862276 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 47862329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 49879472 - 49879513
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  49879472 cagtgattaagtggggagagggacgaaattttaaatgattaa 49879513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 53559511 - 53559564
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  53559511 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 53559564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 54961746 - 54961815
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtc 263  Q
    ||||||||||| ||||||||  |||| ||||||| |||||| ||||||||| ||||  ||||||||||||    
T  54961746 aggattagtaacttcagggactaaaattcaaatgacctatatttgcagggacgaaagacatatttaagtc 54961815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Original strand, 10781770 - 10781822
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||| ||||||||| |||| ||||||||| |||||||| |||||||||||||    
T  10781770 agtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaat 10781822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 121 - 173
Target Start/End: Complemental strand, 24349816 - 24349764
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||| ||| |||||||||| ||||||||| |||||||| |||||||||||||    
T  24349816 agtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaat 24349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Complemental strand, 24711242 - 24711202
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  24711242 agtgattaagtggggagagggacgaaattttaaatgattaa 24711202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 172
Target Start/End: Original strand, 54086992 - 54087032
Alignment:
Q  132 agtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  54086992 agtgattaagtggggagagagacgaaattttaaatgattaa 54087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 37677917 - 37677862
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||    
T  37677917 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggaagaaa 37677862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 50246173 - 50246228
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||    
T  50246173 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggatgaaa 50246228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 53475900 - 53475833
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| || ||||||||||| |||||||| ||||| |||||  |||||||  ||||||||||    
T  53475900 aggattagtaactttagggatgaaaactcaaatggtctatatttgcaaagatgaaagacatatttaag 53475833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 8287032 - 8286946
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||| ||| ||||| || ||||| ||||||||| |||| ||||||||| ||||    
T  8287032 aaatgattaatatttgcaatggcaaaatggaaggattattaacttcagagacgaaaattcaaatggcttatatttgcagggacgaaa 8286946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 12691720 - 12691786
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| ||||||||  |||| ||||||| |||||| ||||||||| ||||  |||||||||    
T  12691720 aggattagtaacttcagggacaaaaattcaaatgacctatatttgcagggacgaaagacatatttaa 12691786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 47981920 - 47982018
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| || ||||| |||||| | ||||| ||||||||| ||||  ||||||||||    
T  47981920 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagacgaaaattcaaatagtctatatttgcagggacgaaagacatatttaag 47982018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 5369079 - 5369038
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  5369079 cagtgattaagtggggagagggacaaaattttaaatgattaa 5369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 9400784 - 9400825
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  9400784 cagtgattaagtggggagagggatgaaattttaaatgattaa 9400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 20086697 - 20086644
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||| | |||||| ||||||||||||||    
T  20086697 gattagtaacttcagggacgaaaattcaaaggacctatatttgcagggatgaaa 20086644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 22566931 - 22566890
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  22566931 cagtgattaagtggggagagggatgaaattttaaatgattaa 22566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 32846462 - 32846385
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    ||||||||||| |||  |  |||||||||| ||||||| ||| |||||| | ||||| |||||||||||||| |||||    
T  32846462 aaatgattaatatttgcaatggcaaaatggaaggattaataacttcaggaacgaaaattcaaatggcctatatttgca 32846385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 33247538 - 33247579
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| || ||||| ||||||||||||    
T  33247538 cagtgattaagtggggagagggatgaaattttaaatgattaa 33247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 34238594 - 34238647
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||| | ||||||||||||||    
T  34238594 gattagtaacttcagggacgaaaattcaaatgacctaaatttgcagggatgaaa 34238647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 34837339 - 34837380
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  34837339 cagtgattaagtggggagagggacgaaattttaaacgattaa 34837380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 35508536 - 35508577
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||  ||||||| ||||||||||||    
T  35508536 cagtgattaagtggggagagatacgaaattttaaatgattaa 35508577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 38012302 - 38012261
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  38012302 cagtgattaagtggggagagagacgaaattttaaacgattaa 38012261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 52909385 - 52909344
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  52909385 cagtgattaagtggggagatggacgaaattttaaatgattaa 52909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 55866386 - 55866333
Alignment:
Q  26 agtgaaggagggaagattttgagaaga-tgaacacagaggtataatggtctttt 78  Q
    |||||||||||||||||||| |||||| ||||||||  ||||| ||||||||||    
T  55866386 agtgaaggagggaagattttaagaagattgaacacatgggtatgatggtctttt 55866333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 22249802 - 22249730
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||| ||| ||||| |||||||  ||||| ||||||||| ||||  |||||||||| ||||    
T  22249802 aggattagtaacttcatggacgaaaattcaaatgatctatatttgcagggacgaaaaacatatttaagccttt 22249730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 172
Target Start/End: Complemental strand, 51692688 - 51692644
Alignment:
Q  128 tgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| |||||||||||| |||||||| |||| |||||||    
T  51692688 tgacagtgatcaagtggggagagggacgaaattttaagtgattaa 51692644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 85)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 38599064 - 38598966
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38599064 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 38598966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 34213896 - 34213760
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  34213896 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacggcc 34213797  T
Q  231 tataattgcagggatgaaatgcatatttaagtctttc 267  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  34213796 tataattgcagggatgaaaagcatatttaagcctttc 34213760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 1231626 - 1231528
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||| | ||| |||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  1231626 aaatgattaatttttacaggggtaaaatgggaggattagtaagctcatggatgaaaaatcaaagggcctataattgtagggatgaaatgcatatttaag 1231528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 25288076 - 25288174
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25288076 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaag 25288174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 1232799 - 1232895
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||| | |||||||||||||||||    ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1232799 aaatgattaatttttacaggggcaaaatgggaggatac--aagctcagggatgaaaaatcaaatggcctataattacagggatgaaatgcatatttaag 1232895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 7393168 - 7393243
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||    
T  7393168 aaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagggatgaaatgtctatttaag 7393243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 34665851 - 34665772
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  34665851 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 34665772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 33497635 - 33497719
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||    
T  33497635 gggcaaaatgggaggattagtaagctcatggatgaaaaatcaaatgccctataattacagggatgaaaagcatatttaagccttt 33497719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 123 - 261
Target Start/End: Original strand, 34214488 - 34214627
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggat-gaaaaat 221  Q
    ||||||| |||||||||   ||| |||| |||||| | | ||||||||| |  ||| | ||||||||||| ||||||||||||||||||||| |||||||    
T  34214488 tgatgtggcagtgattattcgggaagagggacgaactttcaaatgattagtaattacaggggcaaaatggaaggattagtaagttcagggattgaaaaat 34214587  T
Q  222 caaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||| ||||||||||| ||||||||||| |||||||||||    
T  34214588 caaacggcctataattacagggatgaaaagcatatttaag 34214627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 192 - 261
Target Start/End: Original strand, 4463455 - 4463524
Alignment:
Q  192 ggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  4463455 ggaggattagtaagttcagggatgaaatttcaaatggcctatacttgcagggatgaaatgcatatttaag 4463524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 4970206 - 4970130
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||| ||  ||||||||||||||||||||||||||    
T  4970206 gggcaaaatggaaggattagtaagttcagggatgaaatttcaaatgacccctaattgcagggatgaaatgcatattt 4970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 34666559 - 34666635
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||  |||||||    
T  34666559 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagcgatgaaaaacatattt 34666635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 24379015 - 24379089
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatat 256  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||| ||  ||||||||||||||||||||||||    
T  24379015 gggcaaaataggaggattagtaagttcaaggatgaaatatcaaatgacccctaattgcagggatgaaatgcatat 24379089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 29574819 - 29574747
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||| |||||||||||||| ||||||||||  ||||||| |||||| |||||||||||||||||||||||    
T  29574819 aaaatggaaggattagtaagtttagggatgaaatttcaaatgacctatatttgcagggatgaaatgcatattt 29574747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 183 - 261
Target Start/End: Original strand, 27437539 - 27437617
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||  | ||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  27437539 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacggcctatatttgcagggatgaaatgcatatttaag 27437617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 258
Target Start/End: Original strand, 29575910 - 29575980
Alignment:
Q  188 aatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||||||||||| || ||||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  29575910 aatgggaggattagtaaatttagggatgaaatttcaaatggactatatttgcagggatgaaatgcatattt 29575980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 24377258 - 24377186
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||  |||||||| | |||||||||||||||    
T  24377258 aaaatgggaggattagtaagttcagggatgaaacttcaaatgacccctaattgcaagaatgaaatgcatattt 24377186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 258
Target Start/End: Complemental strand, 36574890 - 36574822
Alignment:
Q  190 tgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||  ||||| ||||||||||||||||    
T  36574890 tgggaggattagtaagttcagggatgaaatttcaaatgccctatatatgcagagatgaaatgcatattt 36574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 261
Target Start/End: Complemental strand, 27436643 - 27436565
Alignment:
Q  183 ggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||  | ||||||||| |||||||| ||||| ||||| | |||||| ||||||||||||||||||||||||||    
T  27436643 ggcaaaatgaaaagattagtaacttcagggacgaaaattcaaacgacctatatttgcagggatgaaatgcatatttaag 27436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 33497097 - 33497020
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattta 259  Q
    ||||||||||| |||||||||||||||| | ||||||||||||||| ||||||||| || | ||||||  ||||||||    
T  33497097 gggcaaaatggaaggattagtaagttcaagaatgaaaaatcaaatgacctataattacatgaatgaaaatcatattta 33497020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 16388796 - 16388863
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  16388796 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 16388863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 36576029 - 36576096
Alignment:
Q  191 gggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    ||||||||| ||||||||||||||||||  ||||||||| |||| || |||||||||||| |||||||    
T  36576029 gggaggattggtaagttcagggatgaaatttcaaatggcttatatttacagggatgaaatacatattt 36576096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 36623421 - 36623354
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  36623421 aggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaaaacatatttaag 36623354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 36623637 - 36623740
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||     
T  36623637 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaagc 36623736  T
Q  263 cttt 266  Q
    ||||    
T  36623737 cttt 36623740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 43866811 - 43866713
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  43866811 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 43866713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 20096325 - 20096394
Alignment:
Q  180 atgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||    
T  20096325 atgggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaa 20096394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 23698536 - 23698581
Alignment:
Q  127 gtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  23698536 gtgacagtgattaagtggggagagggacgaaattttaaatgattaa 23698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 27857026 - 27857123
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  |||||||||    
T  27857026 aaatgattaatatttgcaagggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaa 27857123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 36623613 - 36623560
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||    
T  36623613 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 36623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 36928632 - 36928567
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  36928632 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 36928567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 37343042 - 37342989
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||    
T  37343042 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 37342989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 43866835 - 43866888
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||||||||| ||||||| |||||| ||||||||||||||    
T  43866835 gattagtaacttcagggatgaaaattcaaatgacctatatttgcagggatgaaa 43866888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 177
Target Start/End: Original strand, 2693787 - 2693859
Alignment:
Q  106 ccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||| |||||| ||||| |||||||||||||||||||| |||| || |||| |||||||||||| ||||    
T  2693787 ccacgtcatctaatctagtgacgtgacagtgattaagtggggggagtaaccaaattttaaatgattaaatttt 2693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 30711987 - 30712055
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30711987 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 30719764 - 30719832
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  30719764 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaat 30719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 263
Target Start/End: Complemental strand, 41801916 - 41801816
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||| | ||||| ||||||| |||||| ||||||||| ||||  |||||||||||    
T  41801916 aaatgattaatatttgcaggggcagattggaaggattagtaacttcaggaacgaaaattcaaatgacctatatttgcagggacgaaaaacatatttaagt 41801817  T
Q  263 c 263  Q
    |    
T  41801816 c 41801816  T

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Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 4405946 - 4405997
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  4405946 agtgacgtgacagtgattaagtgggaagagggacgaaattttaaatgattaa 4405997  T

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Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 221
Target Start/End: Complemental strand, 7392285 - 7392250
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaat 221  Q
    ||||||||||||||||||||||||||||||||||||    
T  7392285 aaaatgggaggattagtaagttcagggatgaaaaat 7392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 12199210 - 12199257
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12199210 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12199257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 12443638 - 12443685
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||    
T  12443638 tgtggcagtgattaagtggggagagagacgaaattttaaatgattaat 12443685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 13186202 - 13186151
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13186202 agtgacgtggcagtgattaagtggggagagagacgaaattttaaatgattaa 13186151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 25287892 - 25287789
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||| ||| || |||||| ||||  ||||||||||     
T  25287892 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagc 25287793  T
Q  263 cttt 266  Q
    ||||    
T  25287792 cttt 25287789  T

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Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 35756740 - 35756673
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  35756740 gccacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaa 35756673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 38600265 - 38600332
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||  ||||||| |||||| ||||||||| ||||||| ||||||||    
T  38600265 aggattagtaacttcagggacgaaatttcaaatgacctatatttgcagggacgaaatgcctatttaag 38600332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 40422475 - 40422530
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  40422475 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 40422530  T

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Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 7677 - 7763
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||| ||| ||||| |||||||||||||| ||||||||| ||||    
T  7677 aaatgattaatatttgcaggggcatattggaaggattagtaacttcatggacgaaaattcaaatggcctatatttgcagggacgaaa 7763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 547530 - 547433
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||||||  |||| | |||||||||||| ||||||||| |||| |||||||||||    
T  547530 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacaaaaatttaaatggcctatatttgcagggacgaaa-gcatatttaag 547433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 23424796 - 23424894
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| | ||||||||| |||||||| ||||| |||||||||||||| ||||||| | ||||  ||||||||||    
T  23424796 aaatgattaatatttgcaggggcagattggaatgattagtaacttcagggacgaaaattcaaatggcctatatttgcaggaacgaaagacatatttaag 23424894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 31608799 - 31608849
Alignment:
Q  121 agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    ||||| ||| |||||||||||||||||||| |||||||| |||||||||||    
T  31608799 agtgacgtggcagtgattaagtggggagagggacgaaattttaaatgatta 31608849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 38862755 - 38862709
Alignment:
Q  126 tgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38862755 tgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 38862709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 547695 - 547642
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||| ||| ||||| ||||||| |||||||||||||||||||||    
T  547695 gattagtaacttcaaggacgaaaattcaaatgacctataattgcagggatgaaa 547642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 1425318 - 1425359
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1425318 cagtgattaagtggggagagggacgaaattttaaatgattaa 1425359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 3041721 - 3041762
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  3041721 cagtgattaagtggggagagggacgaaattttaaatgattaa 3041762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 4462181 - 4462144
Alignment:
Q  221 tcaaatggcctataattgcagggatgaaatgcatattt 258  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4462181 tcaaatggcctatatttgcagggatgaaatgcatattt 4462144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 23663810 - 23663851
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  23663810 cagtgattaagtggggagagggacgaaattttaaatgattaa 23663851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 25287916 - 25287969
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  25287916 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 25287969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 36186339 - 36186404
Alignment:
Q  107 cacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||| | ||| ||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||    
T  36186339 cacgtcatcaaattagtaatgtggcagtgattaagtagggagagggacgaaattttaaatgattaa 36186404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 36325366 - 36325325
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  36325366 cagtgattaagtggggagagggacgaaattttaaatgattaa 36325325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 264
Target Start/End: Original strand, 37343066 - 37343167
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| || |||||||| |||||||| ||||| ||||||| |||||| ||||||||  ||||  |||||||||||    
T  37343066 aaatgattaatatttgcaggggcatattggaagaattagtaatttcagggacgaaaattcaaatgacctatatttgcaggggcgaaagacatatttaagt 37343165  T
Q  263 ct 264  Q
    ||    
T  37343166 ct 37343167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 38845564 - 38845605
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  38845564 cagtgattaagtggggagagggacgaaattttaaatgattaa 38845605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 39071808 - 39071767
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  39071808 cagtgattaagtggggagagggacgaaattttaaatgattaa 39071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 40775915 - 40775956
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  40775915 cagtgattaagtggggagagggacgaaattttaaatgattaa 40775956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 44407122 - 44407163
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  44407122 cagtgattaagtggggagagggacgaaattttaaatgattaa 44407163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 20385726 - 20385658
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   || |||||||| |||||||||||||    
T  20385726 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaat 20385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 20386700 - 20386768
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| ||||  |||| ||||   || |||||||| |||||||||||||    
T  20386700 gccacgtcagctaatcagtgatgtggcagtagttaactgggctcagggacgaaattttaaatgattaat 20386768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 30711013 - 30710945
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||   || |||||||| |||||||||||||    
T  30711013 gccacgtcaactaatcagtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaat 30710945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Complemental strand, 41802066 - 41802010
Alignment:
Q  206 ttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||  | |||||||||    
T  41802066 ttcagggacgaaaattcaaatggcctatatttgcagggatgaaagacctatttaagt 41802010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9632406 - 9632351
Alignment:
Q  185 caaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgca 240  Q
    |||||||| ||||||||||| |||||||| ||||| ||||||| |||||| |||||    
T  9632406 caaaatggaaggattagtaacttcagggacgaaaattcaaatgacctatatttgca 9632351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 171
Target Start/End: Original strand, 22890275 - 22890330
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgatta 171  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||| |||| ||||||    
T  22890275 taattagtgatgtgacagtgattaagtgggaagagggacaaaattttaagtgatta 22890330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 26740033 - 26740100
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  26740033 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 26740100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 43867026 - 43867093
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||| ||| ||||| |||||||| ||||| ||||||||| ||||  ||||||||||    
T  43867026 aggattagtaacttcatggacgaaaattcaaatggtctatatttgcagggacgaaaaacatatttaag 43867093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 29190443 - 29190529
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| ||||| ||| |||| |||||||| ||||| ||||||||| ||||    
T  29190443 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagagataaaaattcaaatggtctatatttgcagggacgaaa 29190529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 7653 - 7588
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||| | |||||||| ||||| ||||||| |||||| || ||||||||||| || ||||||||    
T  7653 gattagtgacttcagggacgaaaattcaaatgacctatatttacagggatgaaaggcctatttaag 7588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2266624 - 2266583
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  2266624 cagtgattaagtggggagagggacgaaattttaaacgattaa 2266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 8316884 - 8316925
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||  |||||||| ||||||||||||    
T  8316884 cagtgattaagtggggagatggacgaaattttaaatgattaa 8316925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 11478269 - 11478322
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||    
T  11478269 gattagtaacttcagcgacgaaaattcaaatgacctatatttgcagggatgaaa 11478322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 12273149 - 12273190
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||| |||| |||||||| ||||||||||||    
T  12273149 cagtgattaagtgggaagagggacgaaattttaaatgattaa 12273190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 22915654 - 22915695
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  22915654 cagtgattaagtggggagagggacggaattttaaatgattaa 22915695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23424636 - 23424689
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||    
T  23424636 gattagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaa 23424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 24085921 - 24085860
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| |||||||||||||||||||||||| ||| |||| ||||  |||||| ||||    
T  24085921 taattagtgacgtgacagtgattaagtggggagagggacaaaattttaagcgattaaatttt 24085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 29190419 - 29190366
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| || ||||| ||||| ||||||| |||||| ||||||||||||||    
T  29190419 gattagtaactttagggacgaaaattcaaatgacctatatttgcagggatgaaa 29190366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 35449874 - 35449915
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||||||||| |||||||| ||||||||||||    
T  35449874 cagtgattaaatggggagagggacgaaattttaaatgattaa 35449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 40525631 - 40525684
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| || |||||||||||    
T  40525631 gattagtaacttcagggacgaaaattcaaatgacctatatttacagggatgaaa 40525684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Complemental strand, 11478214 - 11478142
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||  | |||||||| ||||    
T  11478214 aggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaaaacctatttaagccttt 11478142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 31873169 - 31873241
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    ||||||||| | ||| ||||||||  ||||||||||||||| ||||  || |||| |||||||||||| ||||    
T  31873169 gccacgtcatcaaattagtgatgtagcagtgattaagtgggaagaggaacaaaattttaaatgattaaatttt 31873241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 6e-37; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 33401126 - 33401224
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  33401126 aaatgattaacttttacaggggcaaaatgggaggattagtaagttcagggatgaaaaatcaaacggcctataattgcagggatgaaaagcatatttaag 33401224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 17784385 - 17784503
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||     
T  17784385 aaatgattaatatttgcaggggcaaaatgggaggattagtaagttcatggatgaaaaatcaaatggcctatcattgcagggatgaaaagcatatttaagc 17784484  T
Q  263 ctttctctaattacaattg 281  Q
    |||| ||||| ||| ||||    
T  17784485 ctttttctaaataccattg 17784503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 131 - 267
Target Start/End: Complemental strand, 14656612 - 14656476
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcc 230  Q
    ||||||||||  ||| |||| |||||| | | |||||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||||||||  |||    
T  14656612 cagtgattaaccgggaagagggacgaactttcaaatgattaacttttacaggggcaaaataggaggattagtaagctcagggatgaaaaatcaaacagcc 14656513  T
Q  231 tataattgcagggatgaaatgcatatttaagtctttc 267  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  14656512 tataattgcagggatgaaaagcatatttaagcctttc 14656476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 261
Target Start/End: Original strand, 4117507 - 4117645
Alignment:
Q  123 tgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatc 222  Q
    ||||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  4117507 tgatgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatc 4117606  T
Q  223 aaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||| ||||||||||| |||||||||||  ||||||||||    
T  4117607 aaacggcctataattacagggatgaaaaacatatttaag 4117645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 4116937 - 4116801
Alignment:
Q  125 atgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaa 224  Q
    ||||| ||||||||||  | | |||| |||||| | | |||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||    
T  4116937 atgtggcagtgattaaccgagaagagggacgaattttcaaatgattaacttttacaggggcaaaatgggaggattagtaagctcagggatgaaaaatcaa 4116838  T
Q  225 atggcctataattgcagggatgaaatgcatatttaag 261  Q
    | ||||||||||| |||||||||||  ||||||||||    
T  4116837 acggcctataattacagggatgaaaaacatatttaag 4116801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 182 - 257
Target Start/End: Original strand, 8427384 - 8427459
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatt 257  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8427384 gggcaaaatgggaggattagtaagtccagggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatt 8427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 33400047 - 33399968
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  33400047 gggcaaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaagcatatttaag 33399968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 260
Target Start/End: Original strand, 1661453 - 1661527
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  |||||||||    
T  1661453 aaaatggaaggattagtaagttcagggatgaaaaatcaaacggcctataattacagggatgaaaatcatatttaa 1661527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 261
Target Start/End: Original strand, 14657228 - 14657307
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||||||| |||||||| |||||||||| |||||||||||  |||||||||| |||||||||||    
T  14657228 gggcaaaatggaaggattagtaaggtcagggataaaaaatcaaacggcctataattatagggatgaaaagcatatttaag 14657307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 13480308 - 13480210
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||  ||||||||||    
T  13480308 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggcctatatttgcagggacgaaagacatatttaag 13480210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 23291844 - 23291746
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||||||||| ||| ||||| ||||  ||||||||||    
T  23291844 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatggcctatatttgtagggacgaaagacatatttaag 23291746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 8427281 - 8427202
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||||||||||||||| || || || ||||| ||||||| |||||| ||||| ||||||||  ||||||||||    
T  8427281 gggcaaaatgggaggattagtaacttgagagacgaaaattcaaatgacctatatttgcaaggatgaaagacatatttaag 8427202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 5064435 - 5064337
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||| ||||||||||||||| |||||||| ||||| ||||||| | |||| || |||||| ||||  ||||||||||    
T  5064435 aaatgattaatatttgcaggggcaaattgggaggattagtaacttcagggacgaaaattcaaatgacttatatttacagggacgaaagacatatttaag 5064337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 15819805 - 15819878
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtctttc 267  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||||||| ||||  |||||||||| |||||    
T  15819805 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaagcctttc 15819878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 3299874 - 3299941
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||| ||||||||||    
T  3299874 aggattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggacgaaatacatatttaag 3299941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 21627983 - 21628050
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| ||| |||| ||||||||||||    
T  21627983 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaa 21628050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30804019 - 30803952
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||||||||||||| |||||||| ||||||||||||    
T  30804019 gccacgtcatcaaattagtgagatggcagtgattaagtggggagagggacgaaattttaaatgattaa 30803952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 33517692 - 33517625
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||  |||||||||||||||||||| |||||||| ||||||||||||    
T  33517692 gccacgtcatcaaattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaa 33517625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 33647121 - 33647054
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  33647121 gccacgtcatcaaattagtgacgtggcagtgattaaatggggagagagacgaaattttaaatgattaa 33647054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 13480492 - 13480590
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||| || || ||| ||||  ||||||||||    
T  13480492 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagggacgaaaattcaaatgacctatatttacaaggacgaaagacatatttaag 13480590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 30234876 - 30234974
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||   |||||| ||||||||| ||||  ||||||||||    
T  30234876 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaacaacctatatttgcagggacgaaagacatatttaag 30234974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 32337664 - 32337578
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||| ||||| ||||||||| ||||    
T  32337664 aaatgattaatatttgcaggggcatattggaaggattagtaacttcagggacgaaaattcaaatggtctatatttgcagggacgaaa 32337578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 5064619 - 5064716
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||| |||  | ||||| | ||| |||||||||||  ||||||| ||||| |||||||||||||| |||||| || ||||  |||||||||    
T  5064619 aaatgattaatatttgcaggggcagattggaaggattagtaacctcagggacgaaaattcaaatggcctatatttgcagagacgaaagacatatttaa 5064716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 12080768 - 12080727
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  12080768 cagtgattaagtggggagagggacgaaattttaaatgattaa 12080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 261
Target Start/End: Complemental strand, 20561187 - 20561122
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||| |||| ||| ||||| ||||||| |||||| ||||||||||||||  ||||||||||    
T  20561187 gattagtaacttcaaggacgaaaattcaaatgacctatatttgcagggatgaaagacatatttaag 20561122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 23291868 - 23291921
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  23291868 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 23291921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 28000650 - 28000691
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  28000650 cagtgattaagtggggagagggacgaaattttaaatgattaa 28000691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 30337581 - 30337540
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  30337581 cagtgattaagtggggagagggacgaaattttaaatgattaa 30337540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 173
Target Start/End: Complemental strand, 680024 - 679956
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||||||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680024 gccacgtcagctaatcagtgatgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 679956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Original strand, 13480333 - 13480385
Alignment:
Q  197 attagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  13480333 attagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 13480385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 738012 - 738079
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||| ||| ||||| ||||||| |||||| ||||||||| ||||  ||||||||||    
T  738012 aggattagtaacttcatggacgaaaattcaaatgacctatatttgcagggacgaaagacatatttaag 738079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 16704624 - 16704679
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||| ||| ||||| |||||||||||||| ||||||||| ||||    
T  16704624 aggattagtaacttcaaggacgaaaattcaaatggcctatatttgcagggacgaaa 16704679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 23292059 - 23292126
Alignment:
Q  194 aggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||||||| ||||| ||||||| |||||| ||||| ||| ||||  ||||||||||    
T  23292059 aggattagtaacttcagggacgaaaattcaaatgacctatatttgcatggacgaaagacatatttaag 23292126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30725917 - 30725850
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| |||||  || |||||||||| ||||||||| |||||||| ||||||||||||    
T  30725917 gccacgtcatcaaattagtgacatggcagtgattaaatggggagagggacgaaattttaaatgattaa 30725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 22494004 - 22494070
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||| |||||||| ||||| ||||||  |||||| ||||||||||||||  | |||||||||    
T  22494004 gattagtaacttcagggacgaaaattcaaataacctatatttgcagggatgaaagacttatttaagt 22494070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 363095 - 363136
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||| ||||||    
T  363095 cagtgattaagtggggagagggacgaaattttaaacgattaa 363136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 1215147 - 1215208
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||| ||||| ||| ||||||||||||||||| || |||||||| |||| ||||||| ||||    
T  1215147 taattagtgacgtggcagtgattaagtggggatagggacgaaattttaagtgattaaatttt 1215208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 3059389 - 3059348
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  3059389 cagtgattaagtgaggagagggacgaaattttaaatgattaa 3059348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 14196880 - 14196921
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| | |||||| ||||||||||||    
T  14196880 cagtgattaagtggggagaggggcgaaattttaaatgattaa 14196921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 17734459 - 17734500
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  17734459 cagtgattaagtggggagagggacaaaattttaaatgattaa 17734500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 32337688 - 32337741
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| ||||| || ||||| ||||||| |||||| ||||||||||||||    
T  32337688 gattagtaacttcagagacgaaaattcaaatgacctatatttgcagggatgaaa 32337741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 680998 - 681066
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    ||||||||||||||||||||| ||| |||| ||||| ||||   |  |||||||| |||||||||||||    
T  680998 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcatggacgaaattttaaatgattaat 681066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 5064594 - 5064542
Alignment:
Q  197 attagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    |||||||| |||||||| ||||| |||||||  ||||| ||||||||||||||    
T  5064594 attagtaacttcagggacgaaaattcaaatgatctatatttgcagggatgaaa 5064542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 20994975 - 20995039
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 227  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||||||||| |||||||    
T  20994975 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaattcaaatg 20995039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 26463326 - 26463270
Alignment:
Q  116 taatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||| ||| |||||||||| ||||  ||| |||||||| ||||||||||||    
T  26463326 taatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaa 26463270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 28498298 - 28498362
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  28498298 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 28498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 29810709 - 29810773
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||| ||| |||||||||| ||||   || ||| |||| ||||||||||||    
T  29810709 acgtcagctaatcagtgacgtggcagtgattaactgggctcagggaccaaattttaaatgattaa 29810773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 161 - 266
Target Start/End: Original strand, 262439 - 262544
Alignment:
Q  161 ttaaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaa 260  Q
    ||||||||||||| |||  | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  262439 ttaaatgattaatatttgcaggggaaaaatgggaggattagtaagttcagggatgaaaaatcaaatgacctataattacagggatgaaatgcatatttaa 262538  T
Q  261 gtcttt 266  Q
    | ||||    
T  262539 gccttt 262544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 261101 - 261003
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | ||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  261101 aaatgattaatatttgcaggggcaaaatgggaggattagtaaattcatggatgaaaaatcaaatgacctataattgcagggatgaaatgcatatttaag 261003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 693 - 595
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    ||||||||||| |||  | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  693 aaatgattaatatttgcaggggcaaaatgagaggattagtaagttcagggatgaaaaatcaaatgacctataattgcagtgatgaaatgcatatttaag 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Original strand, 877 - 980
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||| | ||| ||||||||||| |||||||| ||||| |||||||||| ||| || |||||| ||||  ||||||||||     
T  877 aaatgattaatatttgcaggggcagattggaaggattagtaacttcagggacgaaaattcaaatggccaatatttacagggacgaaagacatatttaagc 976  T
Q  263 cttt 266  Q
    ||||    
T  977 cttt 980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 853 - 800
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  853 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 14400 - 14475
Alignment:
Q  186 aaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  14400 aaaatgggaggattagtaagctcagggatgaaaaatcaaatggcctataattacaggggtgaaaagcatatttaag 14475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 266
Target Start/End: Complemental strand, 13215 - 13131
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagtcttt 266  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||| ||||| || ||||||||||| ||||||||||| ||||    
T  13215 gggcaaaatgggaggattactaaactcagagatgaaaaatcaaatggtctatatttacagggatgaaaagcatatttaagccttt 13131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 73190 - 73111
Alignment:
Q  182 gggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaag 261  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||||||||| |||||||||||    
T  73190 gggcaaaatgggaggattagtaagctcagggatgaaaagtcaaatggcccataattacagggatgaaaagcatatttaag 73111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 239821 - 239888
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||||||||||||||||||| |||| ||||||||||   || |||||||| ||||||||||||    
T  239821 gccacgtcagctaatcagtgatgtggcagtaattaagtgggtgtagggacgaaattttaaatgattaa 239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 37833 - 37900
Alignment:
Q  105 gccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37833 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 37900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 69120 - 69056
Alignment:
Q  108 acgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||| | ||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||||    
T  69120 acgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaa 69056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 23401 - 23322
Alignment:
Q  93 ccaataaacagagccacgtcagctaatcagtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    ||||| ||||||||||||||||| ||| | ||| ||| |||||||||||||||| |||  || |||| ||||||||||||    
T  23401 ccaattaacagagccacgtcagcaaattactgacgtggcagtgattaagtggggggagaaaccaaattttaaatgattaa 23322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 10425 - 10322
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaatgcatatttaagt 262  Q
    ||||||||||| |||  | ||||||| ||| ||||||||||| |||||||| ||||| |||||||  ||||| ||||||||| ||||  | ||||||||     
T  10425 aaatgattaatatttgcaggggcaaattggaaggattagtaacttcagggacgaaaattcaaatgatctatatttgcagggacgaaagacctatttaagc 10326  T
Q  263 cttt 266  Q
    ||||    
T  10325 cttt 10322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 139804 - 139762
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaat 173  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  139804 cagtgattaagtggggagagggacgaaattttaaatgattaat 139762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0559 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1365 - 1324
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1365 cagtgattaagtggggagagggacgaaattttaaatgattaa 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 196 - 249
Target Start/End: Original strand, 10786 - 10839
Alignment:
Q  196 gattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||||    
T  10786 gattagtaacttcagggacgaaaattcaaatgacctatatttgcagggatgaaa 10839  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14060 - 14132
Alignment:
Q  105 gccacgtcagctaatc-agtgatgtgacagtgattaagtggggagagtgacgaaatcttaaatgattaattttt 177  Q
    |||||||||||||||| ||||| |||||| ||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  14060 gccacgtcagctaatctagtgacgtgacaatgattaagtgggg-gagggaccaaattttaaatgattaaatttt 14132  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 141859 - 141900
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  141859 cagtgattaagtggggagagggacgaaattttaaatgattaa 141900  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 1901 - 1860
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  1901 cagtgattaagtggggagagggacgaaattttaaatgattaa 1860  T

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Target: scaffold0279 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 10953 - 10867
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatggcctataattgcagggatgaaa 249  Q
    ||||||||||| |||  |  |||||||||| ||||||||||| |||  ||| ||||| ||||||| |||||| ||||||||| ||||    
T  10953 aaatgattaatatttgcaatggcaaaatggaaggattagtaacttcgtggacgaaaattcaaatgacctatatttgcagggacgaaa 10867  T

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Target: scaffold0295 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Complemental strand, 2275 - 2234
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| ||| |||| ||||||||||||    
T  2275 cagtgattaagtggggagagggacaaaattttaaatgattaa 2234  T

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Target: scaffold0205 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 172
Target Start/End: Original strand, 21234 - 21275
Alignment:
Q  131 cagtgattaagtggggagagtgacgaaatcttaaatgattaa 172  Q
    |||||||||||||||||||| |||| ||| ||||||||||||    
T  21234 cagtgattaagtggggagagggacggaattttaaatgattaa 21275  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 14177 - 14241
Alignment:
Q  163 aaatgattaatttttatatgggcaaaatgggaggattagtaagttcagggatgaaaaatcaaatg 227  Q
    ||||||||||| ||| || ||||| | ||| ||||||||||| ||||| |||||||| |||||||    
T  14177 aaatgattaatatttgtaggggcagattggaaggattagtaacttcagtgatgaaaattcaaatg 14241  T

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