View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF12499_low_13 (Length: 243)
Name: NF12499_low_13
Description: NF12499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12499_low_13 |
 | |
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| [»] chr2 (3 HSPs) |
| |
|
| [»] chr1 (1 HSPs) |
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| [»] chr3 (2 HSPs) |
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| [»] scaffold0436 (1 HSPs) |
| | |
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| [»] chr8 (2 HSPs) |
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| [»] chr4 (2 HSPs) |
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| [»] scaffold0149 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0670 (1 HSPs) |
| | |
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| [»] scaffold0035 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 23844643 - 23844885
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23844643 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
23844742 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23844743 |
aactcataattttgtcatatttacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
23844842 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23844843 |
tccttcatcttattcgttcatttaacccacctatccttctcct |
23844885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 23211024 - 23210782
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
23211024 |
atcattcgtctttaataatcataacctcattttacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
23210925 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
23210924 |
aactcataattttgtcatattcacatcacatctaaatcttacacccaccattagtttaattttcattctcttcttcttttactccttgtgacacacttca |
23210825 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
23210824 |
tccttcatcttattcgttcatttaacccacctatccttctcct |
23210782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 24431707 - 24431465
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24431707 |
atcatttgtctttaataatcataacatcattttacatcatcatcttatgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
24431608 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |
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|
| T |
24431607 |
aactcataattttgtcatattcacatcatatctaattcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacatatttca |
24431508 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||| ||||||| |
|
|
| T |
24431507 |
tccttcatcttatccgttcacttaacccacctatcattctcct |
24431465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 32410348 - 32410590
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32410348 |
atcattcgtcttttataatcataacatcattttacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
32410447 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||| |
|
|
| T |
32410448 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctgcatcttttactcctggtggcacacttca |
32410547 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
32410548 |
tccttcatcttattcgttcatttaacccacctatccttctcct |
32410590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 12056846 - 12057087
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
12056846 |
atcattcgactttaataatcataacatcattttacatcatcatcttacgtcattagcaattcatcattattttacaccatatatttgtctacttatgtct |
12056945 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12056946 |
aactcataattttgtcatattcacat-atatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
12057044 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||| ||| |||||||||||| | ||||| |||||||| |
|
|
| T |
12057045 |
tccttcatcatatccgttcatttaactcgcctatacttctcct |
12057087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 13296192 - 13296298
Alignment:
| Q |
12 |
ttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtctaactcataatt |
111 |
Q |
| |
|
||||||||| ||| |||| ||| |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| |||| || |
|
|
| T |
13296192 |
ttaataatcgcaacttcatcttacttcattatcttacgtcattagcaactcatcatcaacttacaccatatattcgtctacttaagtctaagtcatcatc |
13296291 |
T |
|
| Q |
112 |
ttgtcat |
118 |
Q |
| |
|
||||||| |
|
|
| T |
13296292 |
ttgtcat |
13296298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0436 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0436
Description:
Target: scaffold0436; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 1114 - 875
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1114 |
atcattcgtctttaataatcaaaacctcattttacatcatcatcttacgtcattagcgactcatcattattttacaccatatattcgtctacttatgtct |
1015 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
1014 |
aactcataattttggcatattcacatcatatataaatcttacacccaccattagtttaattttcattctctgcgtcttttactcctagtgacacacttca |
915 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttct |
240 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| ||||| |
|
|
| T |
914 |
tccttcatcttatccgttcttttaacccacctatccttct |
875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 23450112 - 23450355
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattatttt-acaccatatattcgtctacttatgtc |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
23450112 |
atcattcgtctttaataatcataacatcattttacatcatcatcttacgtcattagcaactcatcattatttttacaccatatattcgtctacttatgtc |
23450211 |
T |
|
| Q |
100 |
taactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttc |
199 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||| ||||| |
|
|
| T |
23450212 |
taactcttaattttgtcatattcacgtcatatctaaatcttacacccaccattagtttaattttcattctttgcattttttactcttagtgacatacttc |
23450311 |
T |
|
| Q |
200 |
atccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||| |||||||| |
|
|
| T |
23450312 |
atccttcatcttatccgtccatttaacccacctatccttctcct |
23450355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 24495226 - 24495468
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24495226 |
atcattcgtctttaataatcataacatcattttacatcatcatcttacatcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
24495325 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
24495326 |
aactcataattttgtcatattcacatcatatttaaatcttacacccaccattagtttgattttcattctcagcatcttttactcctagtgacatacttca |
24495425 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||||||| | | |||| |||| |||||| |||||||| |
|
|
| T |
24495426 |
tccttcatcttatccatgcattaaacctacctatccttctcct |
24495468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 34 - 243
Target Start/End: Complemental strand, 23845086 - 23844877
Alignment:
| Q |
34 |
acatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtctaactcataattttgtcatattcacatcatatct |
133 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23845086 |
acatcatcatcttacgtcattagcaactcataattattttacaccatatattcgtctacctatgtctaactcataattttgtcatattcacatcatatct |
23844987 |
T |
|
| Q |
134 |
aaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttcatccttcatcttattcgttcatttaacccaccta |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23844986 |
aaatcttacacccaccattagtttaattttcattctctacatcttttactcccactgacacacttcatccttcatcttatccgttcatttaacccaccta |
23844887 |
T |
|
| Q |
234 |
tgcttctcct |
243 |
Q |
| |
|
| |||||||| |
|
|
| T |
23844886 |
tccttctcct |
23844877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18544775 - 18544653
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||| || |
|
|
| T |
18544775 |
atcatttgtctttaataatcataacatcattttacatcatcatcttacgtcattagcaactcatcattaatttacatcatatatttgtctacttatgact |
18544676 |
T |
|
| Q |
101 |
aactcataattttgtcatattca |
123 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
18544675 |
aactcataattttgtcatattca |
18544653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0149 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0149
Description:
Target: scaffold0149; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 36949 - 36707
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36949 |
atcatttgtctttaataatcataacttcattttacatcatcatcttacatcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
36850 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacacttca |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||| |||||||| |||||| |
|
|
| T |
36849 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttgattttcattctctgcatattttactcatagtgacatacttca |
36750 |
T |
|
| Q |
201 |
tccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||||||| | | |||| |||| |||||| |||||||| |
|
|
| T |
36749 |
tccttcatcttatccatgcattaaacctacctatccttctcct |
36707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 12426 - 12182
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcat--catcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgt |
98 |
Q |
| |
|
||||||| |||| ||||||||||||||| || ||| |||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| || | |
|
|
| T |
12426 |
atcattcatcttcaataatcataacatccttttacgtcatatcatcttacgtcattagaaactcatcattattttataccatatattcgtctactcattt |
12327 |
T |
|
| Q |
99 |
ctaactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacactt |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12326 |
ctaactcataattttgtcatattcacatcatatctaaatcgttcacccaccattagtttagttttcattctctacatcttttactcctagtgacacactt |
12227 |
T |
|
| Q |
199 |
catccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
12226 |
catccttcatcttatccgttcatttaacccacctatcattctcct |
12182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 16478140 - 16478335
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16478140 |
atcattcgtctttaataatcataacatcattttacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
16478239 |
T |
|
| Q |
101 |
aactcataattttgtcatattcacatcatatctaaatcttacacccaccattagtttaattttcattctctacatcttttactcctagtgacacactt |
198 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||| |
|
|
| T |
16478240 |
aactcataa--ttgtcatattaacatcatatctaaatcttacacccaccattagttcaattttcattctctgcatattttactcctagtgacatactt |
16478335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 42597 - 42516
Alignment:
| Q |
37 |
tcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtctaactcataattttgtcat |
118 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||| || ||||||| |
|
|
| T |
42597 |
tcattatcttacgtcattagcaactcatcattaatttacaccatatattcgtctacttaagtctaagtcatcatcttgtcat |
42516 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16481242 - 16481290
Alignment:
| Q |
195 |
acttcatccttcatcttattcgttcatttaacccacctatgcttctcct |
243 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
16481242 |
acttcatccttcatcttatccgttcatttaacccacctatccttctcct |
16481290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0670 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0670
Description:
Target: scaffold0670; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 5653 - 5774
Alignment:
| Q |
1 |
atcattcgtctttaataatcataacatcattctacatcatcatcttacgtcattagcaactcatcattattttacaccatatattcgtctacttatgtct |
100 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| |||| ||||||||| | ||||||||||||| |||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5653 |
atcatttgtctttaataatcataacttcattttacaccatcatctt-cttcattagcaactcttcattaatttacaccatatattcgtctacttatgtct |
5751 |
T |
|
| Q |
101 |
aactcataattttgtcatattca |
123 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
5752 |
aactcataattttgtcatgttca |
5774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 16693 - 16643
Alignment:
| Q |
19 |
tcataacatcattctacatcatcatcttacgtcattagcaactcatcatta |
69 |
Q |
| |
|
||||||||||||| |||||| | ||||||||||||||||| |||||||||| |
|
|
| T |
16693 |
tcataacatcattttacatcctaatcttacgtcattagcacctcatcatta |
16643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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