View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12499_low_3 (Length: 524)

Name: NF12499_low_3
Description: NF12499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12499_low_3
NF12499_low_3
[»] chr8 (14 HSPs)
chr8 (150-314)||(17683697-17683861)
chr8 (150-314)||(17664541-17664705)
chr8 (169-314)||(39837482-39837627)
chr8 (180-316)||(4839713-4839849)
chr8 (179-314)||(17973565-17973700)
chr8 (185-315)||(39845541-39845671)
chr8 (169-314)||(30938282-30938427)
chr8 (179-314)||(25579742-25579877)
chr8 (169-314)||(1406993-1407138)
chr8 (186-314)||(26873541-26873669)
chr8 (186-314)||(26875991-26876119)
chr8 (13-53)||(17664404-17664444)
chr8 (13-53)||(17683560-17683600)
chr8 (220-314)||(4582204-4582298)
[»] chr2 (24 HSPs)
chr2 (150-316)||(20372214-20372380)
chr2 (150-314)||(20621518-20621682)
chr2 (169-314)||(14582925-14583070)
chr2 (169-314)||(15944477-15944622)
chr2 (169-314)||(15952992-15953137)
chr2 (169-314)||(35138593-35138738)
chr2 (169-314)||(35146929-35147074)
chr2 (169-314)||(41233764-41233909)
chr2 (169-314)||(38168277-38168422)
chr2 (169-314)||(42565849-42565994)
chr2 (169-314)||(42574473-42574618)
chr2 (169-286)||(35037884-35038001)
chr2 (205-314)||(44372705-44372814)
chr2 (205-314)||(44388616-44388725)
chr2 (220-314)||(17687369-17687463)
chr2 (203-314)||(25483601-25483712)
chr2 (203-314)||(25491207-25491318)
chr2 (189-314)||(35303737-35303862)
chr2 (220-315)||(27606616-27606710)
chr2 (13-53)||(20621788-20621828)
chr2 (220-314)||(24285696-24285790)
chr2 (220-314)||(42249426-42249520)
chr2 (188-265)||(18989312-18989389)
chr2 (220-314)||(34070575-34070669)
[»] chr5 (19 HSPs)
chr5 (314-508)||(22042553-22042746)
chr5 (168-314)||(29186197-29186343)
chr5 (179-315)||(20398565-20398701)
chr5 (179-314)||(20372843-20372978)
chr5 (169-314)||(1728079-1728224)
chr5 (169-315)||(43597966-43598112)
chr5 (169-315)||(43603458-43603604)
chr5 (169-315)||(43608950-43609096)
chr5 (169-314)||(24956766-24956911)
chr5 (169-314)||(24965229-24965374)
chr5 (179-314)||(23350006-23350141)
chr5 (169-315)||(28843939-28844085)
chr5 (169-314)||(28852550-28852695)
chr5 (182-314)||(31410890-31411022)
chr5 (187-314)||(31421789-31421916)
chr5 (203-314)||(19223555-19223666)
chr5 (189-235)||(17638318-17638364)
chr5 (189-235)||(23028007-23028053)
chr5 (190-236)||(23037923-23037969)
[»] scaffold0156 (1 HSPs)
scaffold0156 (179-314)||(35286-35421)
[»] chr7 (12 HSPs)
chr7 (169-314)||(10439937-10440082)
chr7 (169-314)||(4952317-4952462)
chr7 (169-314)||(13831500-13831645)
chr7 (169-314)||(13839531-13839676)
chr7 (169-314)||(18304312-18304457)
chr7 (169-314)||(12978455-12978600)
chr7 (189-314)||(21662962-21663088)
chr7 (220-314)||(30244775-30244869)
chr7 (253-314)||(4941581-4941642)
chr7 (220-314)||(30255413-30255506)
chr7 (188-243)||(1955691-1955746)
chr7 (220-314)||(30245568-30245662)
[»] chr4 (14 HSPs)
chr4 (169-314)||(27343611-27343756)
chr4 (169-314)||(4523600-4523745)
chr4 (169-314)||(12996476-12996621)
chr4 (179-314)||(8094212-8094347)
chr4 (179-314)||(8103018-8103153)
chr4 (168-314)||(21532224-21532369)
chr4 (186-314)||(52295604-52295732)
chr4 (189-314)||(12428418-12428543)
chr4 (188-314)||(33188766-33188891)
chr4 (241-314)||(10638328-10638400)
chr4 (169-214)||(10638406-10638451)
chr4 (220-259)||(12402907-12402946)
chr4 (189-314)||(3424331-3424454)
chr4 (190-235)||(25249599-25249644)
[»] chr3 (23 HSPs)
chr3 (169-314)||(8154564-8154709)
chr3 (169-315)||(50824351-50824497)
chr3 (169-315)||(50851363-50851509)
chr3 (169-314)||(41006556-41006701)
chr3 (169-314)||(41015336-41015481)
chr3 (179-314)||(14538534-14538670)
chr3 (168-315)||(28470137-28470283)
chr3 (169-314)||(27341254-27341400)
chr3 (169-314)||(2211239-2211384)
chr3 (179-314)||(9525364-9525499)
chr3 (179-314)||(9555038-9555173)
chr3 (189-314)||(17933655-17933780)
chr3 (189-314)||(17919199-17919324)
chr3 (188-312)||(43470492-43470615)
chr3 (189-314)||(16816145-16816268)
chr3 (250-314)||(17628265-17628329)
chr3 (220-314)||(21186747-21186841)
chr3 (220-310)||(18349560-18349650)
chr3 (219-314)||(18039011-18039106)
chr3 (220-314)||(30447-30541)
chr3 (220-314)||(8197667-8197761)
chr3 (188-235)||(31276593-31276640)
chr3 (188-229)||(16288692-16288733)
[»] chr1 (14 HSPs)
chr1 (169-314)||(3432810-3432955)
chr1 (169-314)||(31539954-31540099)
chr1 (169-314)||(31548523-31548668)
chr1 (179-314)||(32137684-32137819)
chr1 (169-314)||(35103984-35104129)
chr1 (179-314)||(41746622-41746758)
chr1 (189-314)||(29221429-29221553)
chr1 (189-314)||(44320132-44320257)
chr1 (189-241)||(28457629-28457681)
chr1 (190-272)||(51058330-51058411)
chr1 (220-314)||(21498869-21498963)
chr1 (189-242)||(8241438-8241491)
chr1 (191-235)||(13462775-13462819)
chr1 (190-235)||(22460026-22460071)
[»] chr6 (17 HSPs)
chr6 (179-314)||(33298085-33298219)
chr6 (185-314)||(15391547-15391676)
chr6 (169-315)||(5004060-5004206)
chr6 (179-314)||(13825703-13825838)
chr6 (179-314)||(30824459-30824594)
chr6 (169-315)||(35091596-35091742)
chr6 (179-315)||(25550294-25550430)
chr6 (169-314)||(11279837-11279982)
chr6 (186-314)||(5994699-5994827)
chr6 (169-312)||(25991852-25991995)
chr6 (169-314)||(25506461-25506606)
chr6 (169-314)||(23925335-23925481)
chr6 (178-255)||(26526631-26526708)
chr6 (223-314)||(13490193-13490284)
chr6 (262-315)||(5489132-5489185)
chr6 (222-314)||(11053702-11053794)
chr6 (188-247)||(14894939-14894998)
[»] scaffold0111 (1 HSPs)
scaffold0111 (169-314)||(33035-33180)
[»] scaffold0209 (1 HSPs)
scaffold0209 (169-314)||(4-149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (186-314)||(15813-15941)
[»] scaffold0002 (1 HSPs)
scaffold0002 (179-314)||(121228-121363)
[»] scaffold0497 (1 HSPs)
scaffold0497 (188-314)||(10993-11119)
[»] scaffold0632 (1 HSPs)
scaffold0632 (186-314)||(4390-4518)
[»] scaffold0016 (1 HSPs)
scaffold0016 (179-314)||(23464-23600)
[»] scaffold0173 (1 HSPs)
scaffold0173 (179-314)||(859-994)
[»] scaffold0039 (1 HSPs)
scaffold0039 (203-314)||(40787-40898)
[»] scaffold0431 (1 HSPs)
scaffold0431 (189-314)||(139-264)
[»] scaffold0170 (1 HSPs)
scaffold0170 (188-314)||(7129-7255)
[»] scaffold0222 (1 HSPs)
scaffold0222 (189-314)||(20422-20547)
[»] scaffold0027 (1 HSPs)
scaffold0027 (168-246)||(65622-65701)
[»] scaffold0315 (1 HSPs)
scaffold0315 (188-244)||(10595-10651)
[»] scaffold0015 (1 HSPs)
scaffold0015 (219-314)||(192528-192623)
[»] scaffold0290 (1 HSPs)
scaffold0290 (188-265)||(15760-15837)
[»] scaffold0991 (1 HSPs)
scaffold0991 (221-314)||(345-438)
[»] scaffold0048 (2 HSPs)
scaffold0048 (181-214)||(7587-7620)
scaffold0048 (242-315)||(7622-7695)
[»] scaffold0044 (2 HSPs)
scaffold0044 (221-314)||(81758-81851)
scaffold0044 (220-314)||(65509-65603)
[»] scaffold0007 (1 HSPs)
scaffold0007 (188-235)||(61371-61418)
[»] scaffold0863 (1 HSPs)
scaffold0863 (220-314)||(343-437)
[»] scaffold1380 (1 HSPs)
scaffold1380 (188-229)||(556-597)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 6e-69; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 150 - 314
Target Start/End: Original strand, 17683697 - 17683861
Alignment:
Q  150 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 249  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  17683697 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgacgaaaattccc 17683796  T
Q  250 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17683797 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 150 - 314
Target Start/End: Original strand, 17664541 - 17664705
Alignment:
Q  150 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 249  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  17664541 gaaaataatgggaaagagaagggtccgactcggaataaaaaatgaggtacttcaaagtaacttctttgtcaaaatttcgtctgaaacgatgaaaattccc 17664640  T
Q  250 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  17664641 gactctaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgaca 17664705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 39837482 - 39837627
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39837482 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 39837581  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  39837582 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 39837627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 180 - 316
Target Start/End: Original strand, 4839713 - 4839849
Alignment:
Q  180 cggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaag 279  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  4839713 cggaatcaaaaatgaggtacttcaaagtaacttctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggtaag 4839812  T
Q  280 gatagagaaaagtggtcaaaatttgaggtatgacata 316  Q
     ||||||||||| |||||||||||| |||||||||||    
T  4839813 aatagagaaaagcggtcaaaatttggggtatgacata 4839849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 17973700 - 17973565
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  17973700 tcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 17973601  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  17973600 gaatagagaaaagtggtcaaaatttggggtatgaca 17973565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 185 - 315
Target Start/End: Original strand, 39845541 - 39845671
Alignment:
Q  185 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 284  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||    
T  39845541 taaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaatag 39845640  T
Q  285 agaaaagtggtcaaaatttgaggtatgacat 315  Q
    || ||||||||||||||||| ||||||||||    
T  39845641 aggaaagtggtcaaaatttggggtatgacat 39845671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 30938427 - 30938282
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30938427 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 30938328  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  30938327 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 30938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 25579742 - 25579877
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  25579742 tcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 25579841  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | ||||| |||||||||||||||||  |||||||||    
T  25579842 gaatagataaaagtggtcaaaatttagggtatgaca 25579877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 1406993 - 1407138
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  1406993 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcacaactttaaaaatacgaata 1407092  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1407093 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1407138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 186 - 314
Target Start/End: Original strand, 26873541 - 26873669
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| || ||| |||||    
T  26873541 aaaaaataaggtactttaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaatttccgacattacaaatacgaataaaatgggtaagaataga 26873640  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||    
T  26873641 gaaaagtggtcaaaatttggggtatgaca 26873669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 186 - 314
Target Start/End: Original strand, 26875991 - 26876119
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    ||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||||||||||||| || ||| |||||    
T  26875991 aaaaaatgaggtattttaaagtaacctctttgtcgaaatttcgtctgaaacgacaaaaatttccgacattaaaaatacgaataaaatgggtaagaataga 26876090  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||    
T  26876091 gaaaagtggtcaaaatttggggtatgaca 26876119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 17664404 - 17664444
Alignment:
Q  13 cactgccgaaaaccttcggacttattgacaacattgtacag 53  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  17664404 cactgcagaaaaccttcggacttattgacaacattgtacag 17664444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 17683560 - 17683600
Alignment:
Q  13 cactgccgaaaaccttcggacttattgacaacattgtacag 53  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  17683560 cactgcagaaaaccttcggacttattgacaacattgtacag 17683600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 4582298 - 4582204
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| ||| |||| | ||| |||  ||||||| || ||| |||||  | ||  ||||||||||||||||||||||| ||||||||||    
T  4582298 gaaatttcgtctaaaatgacggacatttccggttttaaaagtatgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttaaggtatgaca 4582204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 128; Significance: 6e-66; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 150 - 316
Target Start/End: Original strand, 20372214 - 20372380
Alignment:
Q  150 gaaaataatgggaaagagaagggtctgattcggaataaaaaa-tgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcc 248  Q
    ||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |    
T  20372214 gaaaataatgggaaagagaagggtccgactcggaataaaaaaatgaggtacttcaaagtaacct-tttgtcgaaatttcgtctgaaacgacgaaaatttc 20372312  T
Q  249 cgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacata 316  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  20372313 cgactttaaaaatacgaataaaatgggcaaggatagagaaaagtggtcaaaatttggggtatgacata 20372380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 150 - 314
Target Start/End: Complemental strand, 20621682 - 20621518
Alignment:
Q  150 gaaaataatgggaaagagaagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattccc 249  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  20621682 gaaaataatgggaaagagaagggtctgactcagaataaaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaattccc 20621583  T
Q  250 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| ||||| ||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  20621582 gacttcaaaaacacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 20621518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 14583070 - 14582925
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14583070 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 14582971  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  14582970 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 14582925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 15944477 - 15944622
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15944477 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15944576  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15944577 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15944622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 15952992 - 15953137
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15952992 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 15953091  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  15953092 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 15953137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 35138738 - 35138593
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35138738 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35138639  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35138638 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35138593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 35147074 - 35146929
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35147074 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35146975  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35146974 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35146929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 41233764 - 41233909
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41233764 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41233863  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  41233864 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 41233909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 38168277 - 38168422
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38168277 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 38168376  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| ||||||||||||||||||||||||  ||||||||    
T  38168377 aaatgggtaagaatagagaaaagtggtcaaaatttggagtatgaca 38168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 42565849 - 42565994
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42565849 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42565948  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42565949 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42565994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 42574473 - 42574618
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  42574473 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 42574572  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  42574573 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 42574618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 169 - 286
Target Start/End: Complemental strand, 35038001 - 35037884
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35038001 agggcctgactcggaataaaaaatgaggtatttcaaagtaacctctctatcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 35037902  T
Q  269 aaataggcaaggatagag 286  Q
    |||| || ||| ||||||    
T  35037901 aaatgggtaagaatagag 35037884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 44372814 - 44372705
Alignment:
Q  205 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 304  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44372814 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44372715  T
Q  305 aggtatgaca 314  Q
     |||||||||    
T  44372714 gggtatgaca 44372705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 44388725 - 44388616
Alignment:
Q  205 agtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttg 304  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||||||||||||    
T  44388725 agtaacctctttgtcgaaatttcgtcttaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaaagatagaaaaaagtggtcaaaatttg 44388626  T
Q  305 aggtatgaca 314  Q
     |||||||||    
T  44388625 gggtatgaca 44388616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 17687369 - 17687463
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17687369 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17687463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 25483712 - 25483601
Alignment:
Q  203 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 302  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25483712 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25483613  T
Q  303 tgaggtatgaca 314  Q
    || |||||||||    
T  25483612 tggggtatgaca 25483601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 25491318 - 25491207
Alignment:
Q  203 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 302  Q
    |||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  25491318 aaagtaacctctctgtcgagatttcgtctgaaacgacgaaaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 25491219  T
Q  303 tgaggtatgaca 314  Q
    || |||||||||    
T  25491218 tggggtatgaca 25491207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 35303862 - 35303737
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    ||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| |||  | |||| |||||| ||||||||  || ||    ||||||    
T  35303862 aaatgaggtacttcaaattaacctctctgccgaaatttcgtctgaaacgacgaaatttcttggcttttaaaataagaataaaaggggtaaaatcagagaa 35303763  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    || | ||||||||||| |||||||||    
T  35303762 aaatagtcaaaatttggggtatgaca 35303737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 220 - 315
Target Start/End: Original strand, 27606616 - 27606710
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||||||||||||| ||||| |||||||||| |||||||| |||||||||||| |  ||  |||||||||||| |||||||||||  |||||||||    
T  27606616 gaaatttcgtctgagacgac-aaaattcccgtctttaaaagtacgaataaaattgataaaaatagagaaaagtagtcaaaatttggagtatgacat 27606710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 20621828 - 20621788
Alignment:
Q  13 cactgccgaaaaccttcggacttattgacaacattgtacag 53  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20621828 cactgccgaaaaccttcggacttattgacaacattgtacag 20621788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 24285790 - 24285696
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||||| ||||| ||   ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  24285790 gaaatttcgtcttaaacgacggaaatttccagttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 24285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 42249426 - 42249520
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||||| | |||  ||| ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  42249426 gaaatttcgtctaaaacgacggacattttcgattttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 42249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 18989312 - 18989389
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 265  Q
    |||||||||||||| |||||||||||| |   | ||||||||||||  |||| |||||||||| ||||||||| ||||    
T  18989312 aaaatgaggtacttgaaagtaacctctctaccgtaatttcgtctgatgcgacaaaaattcccggctttaaaaagacga 18989389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 34070575 - 34070669
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  ||||||||||||| |||||||||| |||||||||    
T  34070575 gaaattttgtctaaaacgacggacattaccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgatcaaaatttggggtatgaca 34070669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 314 - 508
Target Start/End: Complemental strand, 22042746 - 22042553
Alignment:
Q  314 ataactacatcatctttaactactctttccacttgaaatggctggatatcgtgatgtgcttaaaagacaagttctgggaggttttgaaactgtacatctt 413  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||| ||||||||||||||||||||||||    
T  22042746 ataactacatcatctttaacaactctttccacttcaaatggctggatatcgtgttgtacttaaaagacaaattctaggaggttttgaaactgtacatctt 22042647  T
Q  414 ccatatcaggtattctatattttcagttttcctaactgctaattttattttgttttactactctgcagtgttgttatacttcttcaatgtgcaca 508  Q
    |||||||||||||||||||||||||| |||||||||||||  |    | ||||| |||||||||||| |||||||||||||||||||||||||||    
T  22042646 ccatatcaggtattctatattttcagctttcctaactgct-ctgcactgttgttatactactctgcactgttgttatacttcttcaatgtgcaca 22042553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 168 - 314
Target Start/End: Original strand, 29186197 - 29186343
Alignment:
Q  168 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 267  Q
    ||||||| || |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29186197 aagggtccgactcggaataaaaaatgaggcacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 29186296  T
Q  268 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||    
T  29186297 aaaatgggtaaggatagagaaaagtggtcaaaatttggggtatgaca 29186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 179 - 315
Target Start/End: Original strand, 20398565 - 20398701
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20398565 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20398664  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    | |||||||||||||||||||||||| ||||||||||    
T  20398665 gaatagagaaaagtggtcaaaatttggggtatgacat 20398701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 20372843 - 20372978
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  20372843 tcggaataaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatcggtaa 20372942  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  20372943 gaatagagaaaagtggtcaaaatttggggtatgaca 20372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 1728079 - 1728224
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1728079 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 1728178  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  1728179 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 1728224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 43597966 - 43598112
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43597966 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43598065  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43598066 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43598112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 43603458 - 43603604
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43603458 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43603557  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43603558 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43603604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 43608950 - 43609096
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43608950 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattcccgactttaaaaatacgaata 43609049  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  43609050 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 43609096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 24956766 - 24956911
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24956766 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24956865  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24956866 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24956911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 24965229 - 24965374
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  24965229 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 24965328  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  24965329 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 24965374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 23350006 - 23350141
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||||||||||||| || ||    
T  23350006 tcggaataaaaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaaatgacgagaattcccgactttaaaaatacgaataaaatgggtaa 23350105  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
      |||||||||| ||||||||||||| |||||||||    
T  23350106 aaatagagaaaaatggtcaaaatttggggtatgaca 23350141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 28844085 - 28843939
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28844085 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28843986  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||| ||||||||||||||||| ||||||||||    
T  28843985 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgacat 28843939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 28852695 - 28852550
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  28852695 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 28852596  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  28852595 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 28852550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 182 - 314
Target Start/End: Complemental strand, 31411022 - 31410890
Alignment:
Q  182 gaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaagga 281  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||  |||||||||||||||||||||| ||  || |    
T  31411022 gaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgttttaaacgacgaaaattcctaactttaaaaatacgaataaaatgggttagaa 31410923  T
Q  282 tagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||| |||||||||||||| |||||||||    
T  31410922 tagagaaatgtggtcaaaatttggggtatgaca 31410890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 187 - 314
Target Start/End: Complemental strand, 31421916 - 31421789
Alignment:
Q  187 aaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagag 286  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| || ||| ||||||    
T  31421916 aaaaatgaggtacttcaaagtaacatctttgtcgaaattttgtctgaaacgacgaaaatttccgacttcaaaaatacgaataaaatgggtaagaatagag 31421817  T
Q  287 aaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||||  |||||||||    
T  31421816 aaaagtggtcaaaattttgggtatgaca 31421789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 19223666 - 19223555
Alignment:
Q  203 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 302  Q
    |||||||||||| ||| || ||||| ||||||||||||| ||||| ||||||||||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  19223666 aaagtaacctctctgtcgagatttcatctgaaacgacgacaattctcgactttaaaaatacaaataaaatggataagaatagagaaaagtggtcaaaatt 19223567  T
Q  303 tgaggtatgaca 314  Q
    || |||||||||    
T  19223566 tggggtatgaca 19223555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 17638364 - 17638318
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||    
T  17638364 aaatgaggtacttcaaagtaacctctctgtcgaaatttcgtttgaaa 17638318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 23028007 - 23028053
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||    
T  23028007 aaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaa 23028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 23037969 - 23037923
Alignment:
Q  190 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaac 236  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  23037969 aatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaac 23037923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 35286 - 35421
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  35286 tcggaataaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 35385  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  35386 gaatagagaaaagtggtcaaaatttggggtatgaca 35421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 10440082 - 10439937
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10440082 agggtctgactcggaataaaaaatgaggtactttaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 10439983  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| |||||| |||||||||||||||||||||||| |||||||||    
T  10439982 aaatgggcaagaatagagaaaagtggtcaaaatttggggtatgaca 10439937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 4952317 - 4952462
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4952317 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 4952416  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| ||||| ||||||||||||||||||||||||||||    
T  4952417 aaatgggtaagaatagataaaagtggtcaaaatttgaggtatgaca 4952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 13831645 - 13831500
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13831645 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13831546  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||  |||||||||    
T  13831545 aaatgggtaagaatagaggaaagtggtcaaaatttagggtatgaca 13831500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 13839676 - 13839531
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13839676 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 13839577  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  13839576 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 13839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 18304312 - 18304457
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18304312 agggtccgactcgaaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 18304411  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  18304412 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 18304457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 12978600 - 12978455
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12978600 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 12978501  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12978500 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12978455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 21662962 - 21663088
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt-aaaaatacgaataaaataggcaaggatagaga 287  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||| | || || |||| ||||||||||||||||| || ||  | ||| |    
T  21662962 aaatgaggtacttcaaagtaacctccctgttgaaatttcgtctaaaacgacgaagactctcggctttaaaaaatacgaataaaatgggtaaaaacagata 21663061  T
Q  288 aaagtggtcaaaatttgaggtatgaca 314  Q
    |||||| |||||||||| |||||||||    
T  21663062 aaagtgatcaaaatttggggtatgaca 21663088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 30244869 - 30244775
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||| || ||||||| ||||||||||| ||||||||||||||||||||||| |  ||  ||||||||||||||||||||||||||||||||||    
T  30244869 gaaattacgactgaaacaacgaaaattcctgactttaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttgaggtatgaca 30244775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 4941581 - 4941642
Alignment:
Q  253 tttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  4941581 tttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 4941642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 30255506 - 30255413
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  30255506 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaatttg-ggtatgaca 30255413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 1955691 - 1955746
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaa 243  Q
    |||||||||| |||||||||||||||| ||  ||||||| ||||||||||||||||    
T  1955691 aaaatgaggtgcttcaaagtaacctctctgccgaaattttgtctgaaacgacgaaa 1955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 30245662 - 30245568
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||| || ||||||| ||||||||| | ||| | ||||||||||||||||| |  ||  |||||||||||||||||||| ||  |||||||||    
T  30245662 gaaattacgactgaaacaacgaaaatttctgacatgaaaaatacgaataaaatggataaaaatagagaaaagtggtcaaaaatttgggtatgaca 30245568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 27343611 - 27343756
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27343611 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 27343710  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||  |||||||||||||||||||||||| |||||||||    
T  27343711 aaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 27343756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 4523600 - 4523745
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4523600 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 4523699  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| |  ||| |||||| ||||||||||||||||| |||||||||    
T  4523700 aaatggataagaatagaggaaagtggtcaaaatttggggtatgaca 4523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 12996621 - 12996476
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12996621 agggactgactcggaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 12996522  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  12996521 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 12996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 8094212 - 8094347
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8094212 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8094311  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  8094312 gaatagagaaaagtggtcaaaatttggggtatgaca 8094347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 8103018 - 8103153
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  8103018 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 8103117  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  8103118 gaatagagaaaagtggtcaaaatttggggtatgaca 8103153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 168 - 314
Target Start/End: Original strand, 21532224 - 21532369
Alignment:
Q  168 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 267  Q
    ||||||| || || |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21532224 aagggtccgactcagaataaaaaatgaggtacttcaaagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaat 21532322  T
Q  268 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| |  |||||||||||||||||||||||||||| |||||||||    
T  21532323 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgaca 21532369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 52295732 - 52295604
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    |||||||||||||||||||||||| |||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||    
T  52295732 aaaaaatgaggtacttcaaagtaatctctctgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaagaataga 52295633  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||    
T  52295632 gaaaagtggtcaaaatttggggtatgaca 52295604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 12428418 - 12428543
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  12428418 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 12428517  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  12428518 aagtggtcaaaatttggggtatgaca 12428543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 33188891 - 33188766
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 287  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||||||||||||||| |  |||||||||||| |||||||  |  ||  ||||| |    
T  33188891 aaaatgaggtaattcaaagtaaccttcttgctgaaatttcgtctgaaacgacgaaaattctcagctttaaaaatacaaataaaaaggataaaaataga-a 33188793  T
Q  288 aaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| ||||||||||| |||||||||    
T  33188792 aaagttgtcaaaatttggggtatgaca 33188766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 10638400 - 10638328
Alignment:
Q  241 aaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||||| || ||  |||||||||||||||||||||||| |||||||||    
T  10638400 aaaattcccgactttaaaa-tacgaataaaatgggtaaaaatagagaaaagtggtcaaaatttggggtatgaca 10638328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 10638451 - 10638406
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctct 214  Q
    |||||| || ||||||||||||||||||||||||||||||||||||    
T  10638451 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctct 10638406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 12402946 - 12402907
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaa 259  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  12402946 gaaatttcgtctgaaacgacgaaaattcctgactttaaaa 12402907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 3424454 - 3424331
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    |||||||||||||||||||||||||  ||  ||||||||||||| |||||||||  |||  | |||| ||| || ||||||||  || ||   |||||||    
T  3424454 aaatgaggtacttcaaagtaacctc--tgccgaaatttcgtctggaacgacgaactttcttggcttttaaagtaagaataaaaggggtaaaattagagaa 3424357  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    || || |||||||||| |||||||||    
T  3424356 aaatgatcaaaatttggggtatgaca 3424331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 25249599 - 25249644
Alignment:
Q  190 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    ||||||||||| ||||||||||||  |||||||||||||| |||||    
T  25249599 aatgaggtactccaaagtaacctccctgttgaaatttcgtttgaaa 25249644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 3e-55; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 8154564 - 8154709
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8154564 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 8154663  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  8154664 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 8154709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 50824497 - 50824351
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50824497 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50824398  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50824397 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50824351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 50851363 - 50851509
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50851363 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaata 50851462  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  50851463 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 50851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 41006701 - 41006556
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41006701 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41006602  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41006601 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41006556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 41015481 - 41015336
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41015481 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 41015382  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||| ||||||||||||| |||||||||    
T  41015381 aaatgggtaagaatagagaaaaatggtcaaaatttggggtatgaca 41015336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 14538534 - 14538670
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 277  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  14538534 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 14538633  T
Q  278 aggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    || |||||||||||||||||||||||| |||||||||    
T  14538634 agaatagagaaaagtggtcaaaatttggggtatgaca 14538670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 315
Target Start/End: Original strand, 28470137 - 28470283
Alignment:
Q  168 aagggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 267  Q
    ||||||| || || |||||||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||| | ||||||||||||||||||    
T  28470137 aagggtccgactcagaataaaaaatgaggtacttcatagtaatct-tttgtcgaaatttcgtctgaaacgacgaaaatttctgactttaaaaatacgaat 28470235  T
Q  268 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    ||||| |  |||||||||||||||||||||||||||| ||||||||||    
T  28470236 aaaatggataaggatagagaaaagtggtcaaaatttggggtatgacat 28470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 27341254 - 27341400
Alignment:
Q  169 agggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 267  Q
    |||| |||| ||||||||||| ||||||||||||||||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27341254 agggcctgactcggaataaaaaaatgaggtacttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatatgaat 27341353  T
Q  268 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| |  ||| |||||||||||||||||||||||| |||||||||    
T  27341354 aaaatggataagaatagagaaaagtggtcaaaatttggggtatgaca 27341400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 2211384 - 2211239
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||| |||| |||||||||||||||||||| || ||| || ||||||||  |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  2211384 agggcctgactcggaataaaaaatgaggtattttaaaataccctctttgccgaaatttcgtcttaaacgacgaaaattcctgactttaaaaatacgaata 2211285  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||| ||| |||||||||||||||||||||||  |||||||||    
T  2211284 aaataggtaagaatagagaaaagtggtcaaaatttagggtatgaca 2211239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 9525364 - 9525499
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| ||||||||||||||||||||||||||||||||||| || ||    
T  9525364 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgaataaaatgggtaa 9525463  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9525464 gaatagagaaaagtgatcaaaatttggggtatgaca 9525499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 9555038 - 9555173
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||| || |||||||||| | ||  |||||||||||| |||| |||||||||||||||||||||||||||| |||||| || ||    
T  9555038 tcggaataaaaaatgaggtattttaaagtaacctttctgccgaaatttcgtctaaaacaacgaaaattcccgactttaaaaatacgagtaaaatgggtaa 9555137  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | ||||||||||||| |||||||||| |||||||||    
T  9555138 gaatagagaaaagtgatcaaaatttggggtatgaca 9555173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 17933780 - 17933655
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||  ||||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  17933780 aaatgaggtacttcaaagtaacctctccgaagaaatttcgtctgaaataacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 17933681  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    || ||||||||||||| |||||||||    
T  17933680 aattggtcaaaatttggggtatgaca 17933655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 17919324 - 17919199
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    ||||||||||||| ||||||||||||  |  ||||||||||||||||  |||||||||  || ||||||||||||||||||||| |  ||  ||||||||    
T  17919324 aaatgaggtactttaaagtaacctctccgacgaaatttcgtctgaaataacgaaaattttcggctttaaaaatacgaataaaatggataaaaatagagaa 17919225  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  17919224 aagtggtcaaaatttggggtatgaca 17919199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 188 - 312
Target Start/End: Original strand, 43470492 - 43470615
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 287  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||| || ||||||||||||||||||||  || ||  ||||| |    
T  43470492 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgaataaaattctcggctttaaaaatacgaataaaaagggtaaaaataga-a 43470590  T
Q  288 aaagtggtcaaaatttgaggtatga 312  Q
    ||||| ||||||||||| |||||||    
T  43470591 aaagtagtcaaaatttggggtatga 43470615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 16816145 - 16816268
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    |||||||||||||||||||| |||||  ||  |||||||||||||||  ||||||||| ||| |||||||||||||||||||||  | ||  ||||||||    
T  16816145 aaatgaggtacttcaaagta-cctctccgtcaaaatttcgtctgaaataacgaaaatttccggctttaaaaatacgaataaaatgagtaaaaatagagaa 16816243  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  16816244 aagtggtcaaaatttg-ggtatgaca 16816268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 250 - 314
Target Start/End: Complemental strand, 17628329 - 17628265
Alignment:
Q  250 gactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||||||    
T  17628329 gactttaaaaatacgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 17628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 21186841 - 21186747
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||| |||||| |||||||||| || |||||||| |||||||||||| |  ||  | ||| |||||||||||||||||| |||||||||    
T  21186841 gaaatttcgtttgaaacaacgaaaattctcggctttaaaagtacgaataaaatggataaaaacagataaaagtggtcaaaatttggggtatgaca 21186747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 310
Target Start/End: Complemental strand, 18349650 - 18349560
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtat 310  Q
    |||||||||||| |||||||| | ||| |||| ||||||| ||||||||||||  | ||  |||||||||||| ||||||||||| |||||    
T  18349650 gaaatttcgtctaaaacgacggacatttccgattttaaaagtacgaataaaatgtgtaaaaatagagaaaagttgtcaaaatttggggtat 18349560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 18039106 - 18039011
Alignment:
Q  219 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||||| ||||   ||| || | || |||||||||||||||| || ||  |  ||||||||||||||||||||| |||||||||    
T  18039106 tgaaatttcgtctgaaacaacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaaaagtggtcaaaatttggggtatgaca 18039011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 30447 - 30541
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||| || |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  30447 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacaaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 30541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 8197667 - 8197761
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||| |||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  8197667 gaaattttgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 8197761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 31276640 - 31276593
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||    
T  31276640 aaaatgaggtacttcaaagtaaccttcttgtcgaaatttcgtttgaaa 31276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 16288733 - 16288692
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 229  Q
    ||||||||||||||||||||||||||| ||  ||||||||||    
T  16288733 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgt 16288692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 110; Significance: 3e-55; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 3432810 - 3432955
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3432810 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgtcaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 3432909  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  3432910 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 3432955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 31540099 - 31539954
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31540099 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31540000  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31539999 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31539954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 31548668 - 31548523
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31548668 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 31548569  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  31548568 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 31548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 32137684 - 32137819
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  32137684 tcggaataaaaaatgaggtacttcaaagtaacttatttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatggataa 32137783  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | ||||||||||||| |||||||||| |||| ||||    
T  32137784 gaatagagaaaagtgatcaaaatttggggtaagaca 32137819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 35103984 - 35104129
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35103984 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccaactttaaaaatacgaata 35104083  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  35104084 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 35104129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 41746622 - 41746758
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctcttt-gttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggca 277  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |  |    
T  41746622 tcggaataaaaaatgaggtacttcaaagtaacctcttttgccgaaattttgtctgaaacgacgaaaattcccgactttaaaaatatgaataaaatggata 41746721  T
Q  278 aggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    || ||||| |||||||||||||||||| | |||||||    
T  41746722 agaatagataaaagtggtcaaaatttgggatatgaca 41746758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 29221429 - 29221553
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    |||||||||| |||||| || ||||| ||  ||||||||||||||||   |||||||| ||||||||||||||||||||||||| || ||  ||||||||    
T  29221429 aaatgaggtatttcaaaata-cctctctgccgaaatttcgtctgaaatagcgaaaatttccgactttaaaaatacgaataaaatgggtaaaaatagagaa 29221527  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||| ||||||||||| |||||||||    
T  29221528 aagtagtcaaaatttggggtatgaca 29221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 44320132 - 44320257
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    |||||||||||||  ||||||||||  || |||||||||||||||||||||||   ||| || | || |||||||||||||||| || ||  |  |||||    
T  44320132 aaatgaggtactttcaagtaacctccctgctgaaatttcgtctgaaacgacgatccttctcggcgtttaaaatacgaataaaatgggtaaaaagcgagaa 44320231  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  44320232 aagtggtcaaaatttggggtatgaca 44320257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 28457681 - 28457629
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacga 241  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  28457681 aaatgatgtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacga 28457629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 190 - 272
Target Start/End: Original strand, 51058330 - 51058411
Alignment:
Q  190 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaat 272  Q
    ||||||||| |||||| || ||| | || ||||||||||| |||||| ||||||||||||  |||||||||||||||||||||    
T  51058330 aatgaggtatttcaaaata-cctttctgctgaaatttcgtttgaaacaacgaaaattcccagctttaaaaatacgaataaaat 51058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 21498869 - 21498963
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||||| | ||| |||  ||||||| ||||||  ||||  | ||  |||||||||||||||||||||||| |||||||||    
T  21498869 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacgaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 21498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 8241438 - 8241491
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaa 242  Q
    ||||||||||||| |||||||||||| |   |||||||||||||||||||||||    
T  8241438 aaatgaggtactttaaagtaacctctctaccgaaatttcgtctgaaacgacgaa 8241491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 13462819 - 13462775
Alignment:
Q  191 atgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    |||||||||||||||||||||||||| |  |||||||||||||||    
T  13462819 atgaggtacttcaaagtaacctctttatccaaatttcgtctgaaa 13462775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 22460071 - 22460026
Alignment:
Q  190 aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    ||||||||||| ||||||||||||| ||| |||||||||| |||||    
T  22460071 aatgaggtactccaaagtaacctctctgtcgaaatttcgtttgaaa 22460026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 5e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 33298219 - 33298085
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  33298219 tcggaataaaaaatgaggtacttcaaagtaac-tctttgtcgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 33298121  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||||||||| ||| |||||||||    
T  33298120 ggatagagaaaagtggtcaaaagttggggtatgaca 33298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 185 - 314
Target Start/End: Original strand, 15391547 - 15391676
Alignment:
Q  185 taaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatag 284  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||    
T  15391547 taaaaaatgaggtacttcaaagtaacctctttgtcgaaatttcgtctgaaacgacgaaaattcctggctttaaaaatacgaataaaatgggcaaggatag 15391646  T
Q  285 agaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||||||| | |||||||    
T  15391647 agaaaagtggtcaaaatttgggatatgaca 15391676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 169 - 315
Target Start/End: Complemental strand, 5004206 - 5004060
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||| ||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004206 agggtccgactcggaatcaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 5004107  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5004106 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5004060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 13825838 - 13825703
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  13825838 tcggaatcaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgacgaaaattcctgactttaaaaatacgaataaaatgggtaa 13825739  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | ||||||||||||| |||||||||| |||||||||    
T  13825738 gaatagagaaaagtgatcaaaatttggggtatgaca 13825703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 30824459 - 30824594
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||    
T  30824459 tcggaatcaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacaaataaaatgggtaa 30824558  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  30824559 gaatagagaaaagtggtcaaaatttggggtatgaca 30824594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 169 - 315
Target Start/End: Original strand, 35091596 - 35091742
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  35091596 agggtccgattcgaaataaaaaatgaggtacttcaaagtaacctccttgccaaaatttcgtctgaaacgacgaaaatttccgactttaaaaatatgaata 35091695  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    |||| || ||| |||||||||||||||||||||||| ||||||||||    
T  35091696 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 35091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 25550430 - 25550294
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    |||||||||||||||||||||||||||||||||||| ||   ||||||||| |||||||||||||||||||||||||||||||| ||||||||| || ||    
T  25550430 tcggaataaaaaatgaggtacttcaaagtaacctctctgccaaaatttcgtttgaaacgacgaaaattcccgactttaaaaatatgaataaaatgggtaa 25550331  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    | |||||||||||||||||||||||| ||||||||||    
T  25550330 gaatagagaaaagtggtcaaaatttggggtatgacat 25550294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 11279982 - 11279837
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  11279982 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 11279883  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  11279882 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 11279837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 5994827 - 5994699
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||||    
T  5994827 aaaaaatgaggtacttcaaagtaacctctttgccaaaattttgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaagaataga 5994728  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||    
T  5994727 gaaaagtggtcaaaatttggggtatgaca 5994699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 169 - 312
Target Start/End: Complemental strand, 25991995 - 25991852
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || || ||||||||||||||||||||||||||||||||| |   |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25991995 agggtccgactctgaataaaaaatgaggtacttcaaagtaacctctctaccgaaatttcttctgaaacgacgaaaattcccgactttaaaaatacgaata 25991896  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatga 312  Q
    |||| || ||| |||||||||||||||||| ||||| |||||||    
T  25991895 aaatgggtaagaatagagaaaagtggtcaacatttggggtatga 25991852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 25506461 - 25506606
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||| |||| ||||||| |||||||||||| || |||||||||||| ||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25506461 agggcctgactcggaatcaaaaatgaggtattttaaagtaacctctctgccgaaatttcgtctaaaacgacgaaaattcccgactttaaaaatacgaata 25506560  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| ||||||||||||| |||||||||| |||||||||    
T  25506561 aaatgggtaagaatagagaaaagtgatcaaaatttggggtatgaca 25506606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 23925481 - 23925335
Alignment:
Q  169 agggtctgattcggaat-aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaat 267  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| ||| |   |||||||||||  ||| || ||||||||||||||||||||||||||||    
T  23925481 agggcctgactcggaatcaaaaaatgaggtacttcaaagtaacatctctaccgaaatttcgtcaaaaatgatgaaaattcccgactttaaaaatacgaat 23925382  T
Q  268 aaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||| || ||| |||||||||||||||||||||||| |||||||||    
T  23925381 aaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 23925335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 26526631 - 26526708
Alignment:
Q  178 ttcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttt 255  Q
    |||||||  |||||||||||| |||||||||||| || ||  || |||||||||||||||||||||||||||||||||    
T  26526631 ttcggaaccaaaaatgaggtaattcaaagtaaccactctgccgatatttcgtctgaaacgacgaaaattcccgacttt 26526708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 13490284 - 13490193
Alignment:
Q  223 atttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| ||||||||  |||||||||||||  |||| | ||||||||||||| |  ||  |||||||||||||||||||||||| |||||||||    
T  13490284 attttgtctgaaataacgaaaattcccggttttacagatacgaataaaatggataaaaatagagaaaagtggtcaaaatttggggtatgaca 13490193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 5489132 - 5489185
Alignment:
Q  262 acgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    ||||||||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  5489132 acgaataaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 5489185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 11053794 - 11053702
Alignment:
Q  222 aatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaata-ggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||  ||||||||||  |  ||||||||||||||||||||  || ||  ||||| |||||||||||||||||| |||||||||    
T  11053794 aatttcgtctgaaataacgaaaattctggt-tttaaaaatacgaataaaatttggtaaaaatagaaaaaagtggtcaaaatttggggtatgaca 11053702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 14894998 - 14894939
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattc 247  Q
    ||||||||||||||||||||||  ||||||  ||||| ||||||||| |||| |||||||    
T  14894998 aaaatgaggtacttcaaagtaatttctttgccgaaatatcgtctgaagcgacaaaaattc 14894939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 106; Significance: 8e-53; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 33180 - 33035
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33180 agggtccgactcggaataaaaaatgaggtactttaaagtaacctctttgccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgtata 33081  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||||||||||||||||||||| |||||||||    
T  33080 aaatgggtaagaatagagaaaagtggtcaaaatttggggtatgaca 33035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 169 - 314
Target Start/End: Original strand, 4 - 149
Alignment:
Q  169 agggtctgattcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaata 268  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  4 agggtccgactcggaataaaaaatgaggtacttcaaagtaacctctttgccaaaatttcgtctgaaacggcgaaaattctcaactttaaaaatacgaata 103  T
Q  269 aaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||| || ||| |||||| ||||||||||||||||| |||||||||    
T  104 aaatgggtaagaatagaggaaagtggtcaaaatttggggtatgaca 149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 15941 - 15813
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||  |||||    
T  15941 aaaaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaaaaatacgaataaaatgggtaaaaataga 15842  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||||| |||||||||    
T  15841 gaaaagtggtcaaaatttggggtatgaca 15813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 121363 - 121228
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| ||||||||  |||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  121363 tcggaatcaaaaatgatttacttcaaagtaacctctctaccgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaatgggtaa 121264  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||||||||||||||||| |||||||||    
T  121263 gaatagagaaaagtggtcaaaatttggggtatgaca 121228  T

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Target: scaffold0497 (Bit Score: 91; Significance: 7e-44; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 188 - 314
Target Start/End: Complemental strand, 11119 - 10993
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 287  Q
    ||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||| || ||| |||||||    
T  11119 aaaatgaggtacttcaaagtaacctctctgccgaaatttcgtctgaaacgacgaaaatttccgactttaacaatacgaataaaatgggtaagaatagaga 11020  T
Q  288 aaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||| |||||||||    
T  11019 aaagtggtcaaaatttggggtatgaca 10993  T

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Target: scaffold0632 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 4518 - 4390
Alignment:
Q  186 aaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggataga 285  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| || ||| |||||    
T  4518 aaaaaatgaggtacttcaaagtaacctctctgtcgaaatttcgtctgaaacgatgaaaattaccgactttaaaaatatgaataaaatgggtaagaataga 4419  T
Q  286 gaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||   ||||||||||| |||||||||    
T  4418 gaaaaaatgtcaaaatttggggtatgaca 4390  T

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Target: scaffold0016 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 179 - 314
Target Start/End: Complemental strand, 23600 - 23464
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgacttta-aaaatacgaataaaataggca 277  Q
    ||||||| |||||||||||||||||||||||||||| |   ||||||||||| |||| || ||||||||||||||||| |||||||||||||||| || |    
T  23600 tcggaatcaaaaatgaggtacttcaaagtaacctctctaccgaaatttcgtcagaaatgatgaaaattcccgactttaaaaaatacgaataaaatgggta 23501  T
Q  278 aggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    || |||||||||||||||||||||||| |||||||||    
T  23500 agaatagagaaaagtggtcaaaatttggggtatgaca 23464  T

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Target: scaffold0173 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 179 - 314
Target Start/End: Original strand, 859 - 994
Alignment:
Q  179 tcggaataaaaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaa 278  Q
    ||||||| |||||||||||| ||||||||||||| | ||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  859 tcggaatcaaaaatgaggtatttcaaagtaacctttctgccgaaatttcgtctgaaacgacgaaaattcccagctttaaaaatacgaataaaatgggtaa 958  T
Q  279 ggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    | |||||||||  ||||||||||||| |||||||||    
T  959 gaatagagaaagctggtcaaaatttggggtatgaca 994  T

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Target: scaffold0039 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 40787 - 40898
Alignment:
Q  203 aaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatt 302  Q
    |||||||||||||||| || |||||||||||||||| |||||| | |||||||||||||||||||||||| |  ||| ||||||||||||||||||||||    
T  40787 aaagtaacctctttgtcgagatttcgtctgaaacgatgaaaatgctcgactttaaaaatacgaataaaatggataagaatagagaaaagtggtcaaaatt 40886  T
Q  303 tgaggtatgaca 314  Q
    || |||||||||    
T  40887 tggggtatgaca 40898  T

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Target: scaffold0431 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 189 - 314
Target Start/End: Complemental strand, 264 - 139
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||  ||||||||| | | ||||||||||||||||||||| || |   ||||||||    
T  264 aaatgaggtacttcaaagtaaactcttcgtcgaaatttcgtctgaaataacgaaaatttctggctttaaaaatacgaataaaatgggtagaaatagagaa 165  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  164 aagtggtcaaaatttggggtatgaca 139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 314
Target Start/End: Original strand, 7129 - 7255
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagaga 287  Q
    |||||||||||||||||||||||||   |   ||||||||||||||||| |||||||||| || |||||||| ||| |||||||| || ||  | |||||    
T  7129 aaaatgaggtacttcaaagtaaccttcctcccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacaaataaaatgggtaaaaacagaga 7228  T
Q  288 aaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||||||  |||||||||    
T  7229 aaagtggtcaaaatttagggtatgaca 7255  T

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Target: scaffold0222 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 189 - 314
Target Start/End: Original strand, 20422 - 20547
Alignment:
Q  189 aaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaa 288  Q
    |||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||||| || |||||||| |||||| |||||  | ||    | ||||    
T  20422 aaatgaggtactccaaagtaacctctctgccgaaatttcgtctgaaacaacgaaaattctcggctttaaaagtacgaacaaaatgtgtaaaaccatagaa 20521  T
Q  289 aagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||||||| |||||||||    
T  20522 aagtggtcaaaatttggggtatgaca 20547  T

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Target: scaffold0027 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 65622 - 65701
Alignment:
Q  168 aagggtctgattcggaataaaa-aatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaatt 246  Q
    ||||||| || ||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  65622 aagggtccgactcggaataaaaaaatgaggtacttcaaagtaacatctttgtcgaaatttcgtccgaaacaacgaaaatt 65701  T

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Target: scaffold0315 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 10595 - 10651
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaa 244  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  10595 aaaatgaggtacttcaaagtaacctctttgccgaaatttcgtctgaagcgacgaaaa 10651  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 192623 - 192528
Alignment:
Q  219 tgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  192623 tgaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatctgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 192528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 15760 - 15837
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacga 265  Q
    ||||||||||||||||||||||||| | |   | ||||||||||||| ||||||||||||| | ||||||||| ||||    
T  15760 aaaatgaggtacttcaaagtaacctatctaccgtaatttcgtctgaagcgacgaaaattcctggctttaaaaagacga 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 345 - 438
Alignment:
Q  221 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||| |||||||||    
T  345 aaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttggggtatgaca 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 7587 - 7620
Alignment:
Q  181 ggaataaaaaatgaggtacttcaaagtaacctct 214  Q
    ||||||||||||||||||||||||||||||||||    
T  7587 ggaataaaaaatgaggtacttcaaagtaacctct 7620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 7622 - 7695
Alignment:
Q  242 aaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgacat 315  Q
    ||||||| |||||||||||    || ||||| || ||| |||||||||||||||||||||||| ||||||||||    
T  7622 aaattcctgactttaaaaaatgcaaaaaaatgggtaagaatagagaaaagtggtcaaaatttggggtatgacat 7695  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 81758 - 81851
Alignment:
Q  221 aaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    ||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||||||||||||  |||||||||    
T  81758 aaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtggtcaaaatttagggtatgaca 81851  T

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Target: scaffold0044; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 65509 - 65603
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||||| | ||| |||  ||||||| |||||| |||||  | ||  |||||||||||||  ||||||||| |||||||||    
T  65509 gaaatttcgtctaaaacgacggacatttccggttttaaaagtacgaacaaaatgtgtaaaaatagagaaaagtgtacaaaatttggggtatgaca 65603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 61418 - 61371
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgtctgaaa 235  Q
    ||||||||||||||||||||||||||| || |||||||| || |||||    
T  61418 aaaatgaggtacttcaaagtaacctctatgctgaaattttgtttgaaa 61371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 343 - 437
Alignment:
Q  220 gaaatttcgtctgaaacgacgaaaattcccgactttaaaaatacgaataaaataggcaaggatagagaaaagtggtcaaaatttgaggtatgaca 314  Q
    |||||||||||| |||||| | | ||| |||  ||||||| |||||| |||||  | ||  ||| |||||||||||||||||||| |||||||||    
T  343 gaaatttcgtctaaaacgatggacatttccggttttaaaagtacgaacaaaatgtgtaaaaataaagaaaagtggtcaaaatttggggtatgaca 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1380 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 597 - 556
Alignment:
Q  188 aaaatgaggtacttcaaagtaacctctttgttgaaatttcgt 229  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||    
T  597 aaaatgaggtactccaaagtaacctctctgtcgaaatttcgt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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