View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1249_low_12 (Length: 473)

Name: NF1249_low_12
Description: NF1249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1249_low_12
NF1249_low_12
[»] chr3 (22 HSPs)
chr3 (274-473)||(23629703-23629903)
chr3 (103-250)||(23629534-23629681)
chr3 (331-385)||(47440743-47440797)
chr3 (360-404)||(36692164-36692209)
chr3 (344-384)||(1111856-1111896)
chr3 (329-384)||(4564602-4564655)
chr3 (336-387)||(2078238-2078289)
chr3 (331-386)||(29687075-29687130)
chr3 (351-389)||(1456550-1456588)
chr3 (331-381)||(29783965-29784015)
chr3 (329-383)||(51250249-51250303)
chr3 (345-387)||(52089323-52089365)
chr3 (331-381)||(52453275-52453325)
chr3 (339-385)||(53221959-53222005)
chr3 (336-385)||(1744004-1744053)
chr3 (331-384)||(4216414-4216467)
chr3 (336-384)||(2186442-2186490)
chr3 (344-384)||(12976617-12976657)
chr3 (336-384)||(27185475-27185523)
chr3 (348-384)||(31750432-31750468)
chr3 (336-384)||(33771688-33771736)
chr3 (343-395)||(54557622-54557674)
[»] chr2 (22 HSPs)
chr2 (332-408)||(40967361-40967438)
chr2 (337-384)||(4693081-4693128)
chr2 (336-399)||(36171526-36171592)
chr2 (331-385)||(5168593-5168647)
chr2 (330-384)||(27244649-27244703)
chr2 (329-386)||(4897534-4897591)
chr2 (329-386)||(4944928-4944985)
chr2 (348-385)||(15251853-15251890)
chr2 (351-384)||(15427705-15427738)
chr2 (330-378)||(1244858-1244906)
chr2 (344-384)||(3904208-3904248)
chr2 (344-384)||(6723092-6723132)
chr2 (336-384)||(7302156-7302204)
chr2 (336-376)||(8043974-8044014)
chr2 (343-387)||(9547421-9547465)
chr2 (329-381)||(13835661-13835713)
chr2 (344-404)||(22267519-22267579)
chr2 (336-384)||(24592861-24592909)
chr2 (336-384)||(31815902-31815950)
chr2 (333-385)||(33966316-33966368)
chr2 (331-383)||(44694681-44694733)
chr2 (344-384)||(45419830-45419870)
[»] scaffold0045 (1 HSPs)
scaffold0045 (329-385)||(42209-42265)
[»] chr4 (22 HSPs)
chr4 (337-385)||(51298710-51298758)
chr4 (330-385)||(34969407-34969462)
chr4 (337-384)||(7371563-7371610)
chr4 (337-384)||(11269693-11269740)
chr4 (331-386)||(35823369-35823424)
chr4 (337-384)||(38374956-38375003)
chr4 (330-381)||(47007320-47007371)
chr4 (330-385)||(51436620-51436675)
chr4 (331-408)||(21623409-21623487)
chr4 (331-381)||(36489406-36489456)
chr4 (331-381)||(44918231-44918281)
chr4 (336-377)||(874457-874498)
chr4 (329-397)||(5534501-5534570)
chr4 (325-382)||(8494974-8495031)
chr4 (329-382)||(36490559-36490612)
chr4 (351-384)||(43702344-43702377)
chr4 (343-388)||(49579960-49580005)
chr4 (336-384)||(13121542-13121590)
chr4 (337-389)||(19124632-19124684)
chr4 (330-378)||(24837494-24837542)
chr4 (329-389)||(44221438-44221498)
chr4 (336-384)||(46745188-46745236)
[»] chr5 (18 HSPs)
chr5 (336-387)||(12285614-12285665)
chr5 (328-384)||(40837918-40837974)
chr5 (331-388)||(689540-689597)
chr5 (332-389)||(5974235-5974292)
chr5 (331-384)||(33654741-33654794)
chr5 (337-387)||(11647196-11647246)
chr5 (337-383)||(18147571-18147617)
chr5 (338-384)||(19783650-19783696)
chr5 (343-384)||(781868-781909)
chr5 (339-384)||(7861016-7861061)
chr5 (338-383)||(10515361-10515406)
chr5 (336-384)||(21212068-21212117)
chr5 (331-384)||(33645704-33645757)
chr5 (336-384)||(8545004-8545052)
chr5 (351-387)||(28344567-28344603)
chr5 (330-401)||(40445975-40446047)
chr5 (332-384)||(41650954-41651006)
chr5 (337-385)||(42964508-42964556)
[»] chr1 (18 HSPs)
chr1 (336-387)||(31979447-31979498)
chr1 (336-404)||(3573319-3573387)
chr1 (331-404)||(17201201-17201274)
chr1 (338-385)||(17669645-17669692)
chr1 (331-384)||(16033465-16033518)
chr1 (336-385)||(16967208-16967257)
chr1 (324-381)||(30279638-30279695)
chr1 (331-384)||(37013981-37014034)
chr1 (336-389)||(40535196-40535249)
chr1 (336-384)||(2889941-2889989)
chr1 (337-389)||(4806805-4806857)
chr1 (336-384)||(8269383-8269431)
chr1 (332-384)||(9265851-9265903)
chr1 (337-389)||(17651390-17651442)
chr1 (339-387)||(19533190-19533238)
chr1 (336-384)||(26705598-26705646)
chr1 (336-384)||(29506825-29506873)
chr1 (348-384)||(30937485-30937521)
[»] scaffold0182 (1 HSPs)
scaffold0182 (339-392)||(17778-17831)
[»] chr8 (17 HSPs)
chr8 (333-384)||(29546888-29546939)
chr8 (327-384)||(8837909-8837966)
chr8 (336-385)||(10982724-10982773)
chr8 (336-389)||(30071526-30071579)
chr8 (331-381)||(6394775-6394825)
chr8 (331-385)||(29924931-29924985)
chr8 (343-385)||(31446374-31446416)
chr8 (339-377)||(32319924-32319962)
chr8 (338-384)||(32421569-32421615)
chr8 (331-389)||(42200672-42200730)
chr8 (337-386)||(15079165-15079214)
chr8 (336-385)||(28084280-28084329)
chr8 (331-384)||(29716715-29716768)
chr8 (336-384)||(17062354-17062402)
chr8 (336-384)||(17585956-17586004)
chr8 (333-385)||(36588108-36588160)
chr8 (332-404)||(42541842-42541914)
[»] chr6 (16 HSPs)
chr6 (339-404)||(4922402-4922468)
chr6 (331-389)||(15291700-15291758)
chr6 (331-384)||(14609974-14610027)
chr6 (339-387)||(5954612-5954660)
chr6 (343-391)||(6160676-6160724)
chr6 (329-381)||(10664622-10664674)
chr6 (332-402)||(6003377-6003448)
chr6 (330-387)||(3373393-3373450)
chr6 (331-380)||(6555534-6555583)
chr6 (331-384)||(8916489-8916542)
chr6 (331-384)||(12412270-12412323)
chr6 (339-384)||(21598958-21599003)
chr6 (329-378)||(29069474-29069523)
chr6 (348-384)||(12602035-12602071)
chr6 (345-389)||(17329988-17330032)
chr6 (328-384)||(28898846-28898902)
[»] chr7 (13 HSPs)
chr7 (328-385)||(21136821-21136878)
chr7 (336-387)||(429190-429241)
chr7 (337-388)||(38911298-38911349)
chr7 (336-378)||(7720223-7720265)
chr7 (331-381)||(28200403-28200453)
chr7 (336-385)||(25106058-25106107)
chr7 (331-384)||(30622965-30623018)
chr7 (341-382)||(31723421-31723462)
chr7 (341-377)||(2959115-2959151)
chr7 (337-385)||(27263340-27263388)
chr7 (337-385)||(27270234-27270282)
chr7 (337-385)||(32315222-32315270)
chr7 (329-381)||(39926556-39926608)
[»] scaffold0008 (1 HSPs)
scaffold0008 (330-381)||(119561-119612)
[»] scaffold1063 (1 HSPs)
scaffold1063 (329-389)||(1070-1130)
[»] scaffold0016 (1 HSPs)
scaffold0016 (336-384)||(99035-99083)


Alignment Details
Target: chr3 (Bit Score: 133; Significance: 6e-69; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 274 - 473
Target Start/End: Original strand, 23629703 - 23629903
Alignment:
Q  274 cttcttcttctctatgtatgtttccatcatcgtagataatcttattagagatatttatgtcatcgtgaacttaacttagttgatagggacaatatataat 373  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23629703 cttcttcttctctctgtatgtttccatcatcgtagataatcttatttgagatatttatgtcatcgtgagcttatcttagttgatagggacaatatataat 23629802  T
Q  374 atatgcaaggtttgagtttaaatctcgac-catcacnnnnnnnngataatcttatttgagacgaatcatatactaaatgtaaatatttacttcagctata 472  Q
    |||||||||||||||||| |||||||||| |  ||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23629803 atatgcaaggtttgagttcaaatctcgacactacaaaaaaaaaagataatcttatttgagacgaatcatatactaaatgtaaatatttatttcagctata 23629902  T
Q  473 a 473  Q
    |    
T  23629903 a 23629903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 103 - 250
Target Start/End: Original strand, 23629534 - 23629681
Alignment:
Q  103 gatataacatggatctgtgcctattgtataacacctctcatgacaaattttcactttattgcaaaattttgcatttaaaaaagatgggtcctcatatact 202  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23629534 gatataacatggatctgtgcttgttgtataacacctctcatgacaaagtttcactttattgcaaaattttgcatttaaaaaagatgggtcctcatatact 23629633  T
Q  203 gtcttgatccaatagtagatagatattactaatgatgctatacaaccc 250  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23629634 gtcttgatccaatagtagatagatattactaataatgctatacaaccc 23629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 47440743 - 47440797
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||| ||||||||||| || |||||||| ||||||||||||||||||| ||||||    
T  47440743 tgtcttcgtgaacttagctcagttgataaggacaatatataatatatgtaaggtt 47440797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 36692209 - 36692164
Alignment:
Q  360 ggacaatatataatatatgcaaggtttga-gtttaaatctcgacca 404  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||    
T  36692209 ggacaatacataatatatgcaaggtttgaggtttaaatctcgacca 36692164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 1111896 - 1111856
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  1111896 ttaactcagttgatagggacaatacataatatatgcaaggt 1111856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 384
Target Start/End: Original strand, 4564602 - 4564655
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||||||||||  ||||||| ||||||||||  ||||||||||||||||    
T  4564602 tatgtcatcgtgaactta--ttagttggtagggacaatgcataatatatgcaaggt 4564655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 387
Target Start/End: Original strand, 2078238 - 2078289
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||||||||||| ||||| ||| ||||||  |||||||||||||||||||    
T  2078238 tcgtgaacttaactcagttggtagagacaatgcataatatatgcaaggtttg 2078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 29687075 - 29687130
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggttt 386  Q
    |||| |||||| |||| || |||||||| |||||||||||| ||||||||||||||    
T  29687075 tgtcctcgtgagcttagctcagttgatatggacaatatatattatatgcaaggttt 29687130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 1456588 - 1456550
Alignment:
Q  351 agttgatagggacaatatataatatatgcaaggtttgag 389  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  1456588 agttgatagggacaatgtataatatatgcaaggtctgag 1456550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 29784015 - 29783965
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||||| | ||||||||||||| ||| ||||||||||||||| |||||    
T  29784015 tgtcatcgtaatcttaacttagttggtagagacaatatataatatgtgcaa 29783965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 51250303 - 51250249
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaagg 383  Q
    |||||| |||||| ||||||| ||||| || ||||||| ||||||||||||||||    
T  51250303 tatgtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaagg 51250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 52089323 - 52089365
Alignment:
Q  345 taacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||    
T  52089323 taactcagttggtagagacaatatataatatatgcaaggtttg 52089365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 52453325 - 52453275
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||||||| |||| ||||||| |||||||||||  |||||||||||||    
T  52453325 tgtcatcgtgagcttagcttagttaatagggacaatgcataatatatgcaa 52453275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 53221959 - 53222005
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||||||    
T  53221959 tgaacttaactcagttgataaggacaatgtataatatatgtaaggtt 53222005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 1744053 - 1744004
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||||||||| | ||||| || |||||||| |||||||||||||||||    
T  1744053 tcgtgaacttaattcagttggtatggacaatacataatatatgcaaggtt 1744004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 4216467 - 4216414
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| ||||||||||| || |||||||| |||||||  ||||||||||||||||    
T  4216467 tgtcctcgtgaacttagctcagttgataaggacaatgcataatatatgcaaggt 4216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 2186490 - 2186442
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||||||||| ||||| || |||||||| |||||||||| |||||    
T  2186490 tcgtgaacttaactcagttggtatggacaatacataatatatgtaaggt 2186442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 12976657 - 12976617
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||||||||||||  ||||||||||||||||    
T  12976657 ttaactcagttgatagggacaatgcataatatatgcaaggt 12976617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 27185475 - 27185523
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| |||| || ||||| ||||||||||| ||||||||||||||||    
T  27185475 tcgtgagcttagctcagttggtagggacaatacataatatatgcaaggt 27185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 31750432 - 31750468
Alignment:
Q  348 cttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  31750432 cttagttggtagggacaatacataatatatgcaaggt 31750468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 33771688 - 33771736
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| ||||| || ||||||| |||||||||||||||||    
T  33771688 tcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggt 33771736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 54557622 - 54557674
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggtttgagtttaaa 395  Q
    ||||| ||||||||||| ||||||| |||||||||| |||||| | |||||||    
T  54557622 cttaatttagttgatagagacaatacataatatatgtaaggttggggtttaaa 54557674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 40967438 - 40967361
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga-gtttaaatctcgaccatcac 408  Q
    |||||||||| ||||||| |||||||| |||||||  |||||||||||||||||||| ||| ||| ||||||||||||    
T  40967438 gtcatcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtttgaggttcaaacctcgaccatcac 40967361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 4693081 - 4693128
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  4693081 cgtgaacttaactcagttgataaggacaatatataatacatgcaaggt 4693128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 399
Target Start/End: Original strand, 36171526 - 36171592
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatata--atatatgcaaggttt-gagtttaaatctc 399  Q
    |||||| ||||||| ||||| ||||||||||| |||  ||||||||||||||| |||||||||||||    
T  36171526 tcgtgagcttaactcagttggtagggacaatacataatatatatgcaaggtttagagtttaaatctc 36171592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 5168647 - 5168593
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||| ||| ||||||| |||||||||||| |||  |||||||||||||||||    
T  5168647 tgtcatcatgagcttaactcagttgatagggataatgcataatatatgcaaggtt 5168593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 384
Target Start/End: Original strand, 27244649 - 27244703
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||| |||||| |||| || ||||||||||||||||  ||||||||||||||||    
T  27244649 atgtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggt 27244703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 4897534 - 4897591
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggttt 386  Q
    |||||||| |||| ||||||| ||||| || |||||||  ||||||||||||||||||    
T  4897534 tatgtcattgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggttt 4897591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 4944928 - 4944985
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggttt 386  Q
    |||||||| |||| ||||||| ||||| || |||||||  ||||||||||||||||||    
T  4944928 tatgtcattgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggttt 4944985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 385
Target Start/End: Complemental strand, 15251890 - 15251853
Alignment:
Q  348 cttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  15251890 cttagttgatatggacaatatataaaatatgcaaggtt 15251853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 15427705 - 15427738
Alignment:
Q  351 agttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||| |||||||||||||||||||||||||    
T  15427705 agttgatatggacaatatataatatatgcaaggt 15427738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 1244906 - 1244858
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatg 378  Q
    ||||| |||||| ||||||| ||||| || |||||||||||||||||||    
T  1244906 atgtcctcgtgagcttaactcagttggtacggacaatatataatatatg 1244858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 3904208 - 3904248
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||||||||||||||||||  |||||||||| |||||    
T  3904208 ttaacttagttgatagggacaatgcataatatatgtaaggt 3904248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Complemental strand, 6723132 - 6723092
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| |||||||| ||||||| |||||||||||||||||    
T  6723132 ttaactcagttgatatggacaatgtataatatatgcaaggt 6723092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 7302204 - 7302156
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| || ||||||||||||||||  |||| |||||||||||    
T  7302204 tcgtgaacttagctcagttgatagggacaatgcataaaatatgcaaggt 7302156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 376
Target Start/End: Original strand, 8043974 - 8044014
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatata 376  Q
    ||||||||||| || ||||||||| ||||||||||||||||    
T  8043974 tcgtgaacttagctcagttgatagagacaatatataatata 8044014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 343 - 387
Target Start/End: Complemental strand, 9547465 - 9547421
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    ||||||| |||||||| |||||||  |||||||||||||||||||    
T  9547465 cttaactcagttgatatggacaatgcataatatatgcaaggtttg 9547421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 13835661 - 13835713
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    |||||| |||||||||||||| |||||||| | ||||| |||||||| |||||    
T  13835661 tatgtcctcgtgaacttaactcagttgataagaacaatgtataatatgtgcaa 13835713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 404
Target Start/End: Original strand, 22267519 - 22267579
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggtttgagtttaaatctcgacca 404  Q
    |||||| ||||| || |||||||  ||||||||||||||||||||||| ||| | ||||||    
T  22267519 ttaactcagttggtacggacaatgcataatatatgcaaggtttgagttcaaaccccgacca 22267579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 24592909 - 24592861
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| || ||||| ||||||||||  ||||||||||||||||    
T  24592909 tcgtgaacttagctcagttggtagggacaatgcataatatatgcaaggt 24592861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 31815950 - 31815902
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| ||||| ||||||||||  ||||||||||||||||    
T  31815950 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 31815902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 33966316 - 33966368
Alignment:
Q  333 tcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||||||||| ||||| || | |||||  |||||||||||||||||    
T  33966316 tcatcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaggtt 33966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 44694681 - 44694733
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaagg 383  Q
    |||| |||||||||||||| ||||||||  ||||||  |||||||||||||||    
T  44694681 tgtcctcgtgaacttaactcagttgatatagacaatgcataatatatgcaagg 44694733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 384
Target Start/End: Original strand, 45419830 - 45419870
Alignment:
Q  344 ttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||||||||||| || ||||||||||||||| |||||    
T  45419830 ttaacttagttgatagagataatatataatatatgtaaggt 45419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 385
Target Start/End: Original strand, 42209 - 42265
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  42209 tatgtcatcgtgaacttaatttagttgatagagataatgtataatatatgcaaggtt 42265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 51298758 - 51298710
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  51298758 cgtgaacttaactcagttgataaggacaatatataatatatgcaaggtt 51298710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 34969462 - 34969407
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||    
T  34969462 atgtcctcgtaaacttaacttagttgatatgaacaatatataatatatgcaaggtt 34969407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 384
Target Start/End: Complemental strand, 7371610 - 7371563
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||| ||||||| |||||||| |||||||| ||||||||||||||||    
T  7371610 cgtgagcttaactcagttgataaggacaatacataatatatgcaaggt 7371563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 11269693 - 11269740
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||| ||||||||||||| || |||||||| ||||||||||||||||    
T  11269693 cgtgagcttaacttagttggtaaggacaatacataatatatgcaaggt 11269740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 35823369 - 35823424
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggttt 386  Q
    ||||||||||||||||||| | |||||| ||||||   ||||||||||||||||||    
T  35823369 tgtcatcgtgaacttaactcaattgatatggacaaggcataatatatgcaaggttt 35823424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 384
Target Start/End: Original strand, 38374956 - 38375003
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||| ||||||||||||| ||||||||||  ||||||||||||||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaaggt 38375003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 381
Target Start/End: Complemental strand, 47007371 - 47007320
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||| |||| ||||||| ||||| ||||||||||| |||||||||||||    
T  47007371 atgtcattgtgagcttaactcagttgttagggacaatacataatatatgcaa 47007320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 51436675 - 51436620
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||| |||||||||||||| |||||||| | |||||  |||||||||||||||||    
T  51436675 atgtcctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaaggtt 51436620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 21623487 - 21623409
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga-gtttaaatctcgaccatcac 408  Q
    |||| |||||||||||  | ||||| ||||||||||  |||||||||||||||| ||| ||||||| |||| |||||||    
T  21623487 tgtcttcgtgaacttagttcagttggtagggacaatgcataatatatgcaaggtctgaggtttaaacctcggccatcac 21623409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 36489456 - 36489406
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    |||||||| ||||||| |||||||| ||||||||||  |||||||||||||    
T  36489456 tgtcatcgcgaacttagcttagttgttagggacaatgcataatatatgcaa 36489406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 44918281 - 44918231
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    |||| ||||||  |||||| ||||||||| |||||||||||||||||||||    
T  44918281 tgtcttcgtgagtttaactcagttgatagagacaatatataatatatgcaa 44918231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 874457 - 874498
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatat 377  Q
    ||||||||||||||||||||||| |||||||  |||||||||    
T  874457 tcgtgaacttaacttagttgatatggacaatgcataatatat 874498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 397
Target Start/End: Original strand, 5534501 - 5534570
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt-ttgagtttaaatc 397  Q
    ||||||||||||| ||||||| ||||| ||   ||||||||||||||||||||  | |||||||||||||    
T  5534501 tatgtcatcgtgagcttaactcagttggtaataacaatatataatatatgcaatatcttgagtttaaatc 5534570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 8494974 - 8495031
Alignment:
Q  325 tatttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaag 382  Q
    ||||| |||| ||||||||||| || ||||| ||||||||||  ||||||||||||||    
T  8494974 tatttttgtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaag 8495031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Original strand, 36490559 - 36490612
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaag 382  Q
    ||||||||||||| ||||||||||||| || |||||||  ||||| ||||||||    
T  36490559 tatgtcatcgtgagcttaacttagttggtatggacaatgcataatgtatgcaag 36490612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 384
Target Start/End: Complemental strand, 43702377 - 43702344
Alignment:
Q  351 agttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||||||||| ||||||||||||||||    
T  43702377 agttgatagggacaatacataatatatgcaaggt 43702344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 49579960 - 49580005
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggtttga 388  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||    
T  49579960 cttaactcaattggtagggacaatgtataatatatgcaaggtttga 49580005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 13121542 - 13121590
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| |||| |||||||| ||||||||||  ||||||||||||||||    
T  13121542 tcgtgagcttagcttagttggtagggacaatgcataatatatgcaaggt 13121590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 19124684 - 19124632
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||| ||||||| ||||||||  ||||||| |||||||||||||||| ||||    
T  19124684 cgtgagcttaactcagttgataaagacaatacataatatatgcaaggtctgag 19124632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 378
Target Start/End: Complemental strand, 24837542 - 24837494
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatg 378  Q
    ||||| |||||| |||||||||||||||| | |||||| ||||||||||    
T  24837542 atgtcctcgtgagcttaacttagttgatatgaacaatacataatatatg 24837494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 44221438 - 44221498
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||||||||||| ||||| | ||||| || |||||||  |||||||||||||||| ||||    
T  44221438 tatgtcatcgtgagcttaattcagttggtatggacaatgcataatatatgcaaggtctgag 44221498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 46745188 - 46745236
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| |||| || |||||||| ||||||| |||||||||||||||||    
T  46745188 tcgtgagcttatctcagttgatatggacaatgtataatatatgcaaggt 46745236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 12285665 - 12285614
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  12285665 tcgtgaacttaactcagttgataaagacaatatataatatatgcaaggtttg 12285614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 384
Target Start/End: Complemental strand, 40837974 - 40837918
Alignment:
Q  328 ttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||| |||||||||||||| ||||| || ||||||||||||| |||||||||||    
T  40837974 ttatgtcctcgtgaacttaactcagttggtatggacaatatataaaatatgcaaggt 40837918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 689540 - 689597
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga 388  Q
    |||| |||||||||||||| |||||||| ||||||| ||||||||||| ||| |||||    
T  689540 tgtcctcgtgaacttaactcagttgatatggacaatgtataatatatgtaagatttga 689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 389
Target Start/End: Complemental strand, 5974292 - 5974235
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    |||||||||||||||||| ||| |||||||| |||  |||||||||||||||| ||||    
T  5974292 gtcatcgtgaacttaactcagtcgatagggataatgcataatatatgcaaggtctgag 5974235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 33654741 - 33654794
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| ||||||| ||||| ||||||||||  ||||||||||||||||    
T  33654741 tgtcatcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 33654794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 387
Target Start/End: Original strand, 11647196 - 11647246
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    ||||||||||||| ||||| || |||||||  |||||||||||||||||||    
T  11647196 cgtgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttg 11647246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 383
Target Start/End: Complemental strand, 18147617 - 18147571
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaagg 383  Q
    ||||| ||||||| |||||||| ||||||| ||||||||||||||||    
T  18147617 cgtgagcttaactcagttgataaggacaatgtataatatatgcaagg 18147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Complemental strand, 19783696 - 19783650
Alignment:
Q  338 gtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| ||||||||||||||||  ||||||| ||||||||||||||||    
T  19783696 gtgagcttaacttagttgataaagacaatacataatatatgcaaggt 19783650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 781868 - 781909
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||| |||||||||||||||| ||||| |||||||||||    
T  781868 cttaactcagttgatagggacaatgtataaaatatgcaaggt 781909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 7861061 - 7861016
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| ||| |||||||||||||||||||  ||||||||||||||||    
T  7861061 tgaatttatcttagttgatagggacaatgcataatatatgcaaggt 7861016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Original strand, 10515361 - 10515406
Alignment:
Q  338 gtgaacttaacttagttgatagggacaatatataatatatgcaagg 383  Q
    |||| |||||||||||||||| |||||||  |||||||||||||||    
T  10515361 gtgagcttaacttagttgatatggacaatgaataatatatgcaagg 10515406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 21212117 - 21212068
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataa-tatatgcaaggt 384  Q
    |||||| |||||||||||||||| |||||||| |||| ||||||||||||    
T  21212117 tcgtgagcttaacttagttgatatggacaatacataattatatgcaaggt 21212068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 33645757 - 33645704
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| |||||| ||||||| ||||| || ||||||| |||||||||||||||||    
T  33645757 tgtcctcgtgagcttaactcagttggtatggacaatgtataatatatgcaaggt 33645704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 8545052 - 8545004
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| |||||||| |||||||  ||||||||||||||||    
T  8545052 tcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggt 8545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 387
Target Start/End: Original strand, 28344567 - 28344603
Alignment:
Q  351 agttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  28344567 agttgaaagggacaatgtataatatatgcaaggtttg 28344603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 401
Target Start/End: Original strand, 40445975 - 40446047
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga-gtttaaatctcga 401  Q
    ||||| ||||||  |||||| |||||||| |||||||  |||||||||||||||| ||| ||| |||||||||    
T  40445975 atgtcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaatctcga 40446047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 41651006 - 41650954
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||||| ||||||| ||||| || |||||||  ||||||||||||||||    
T  41651006 gtcatcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggt 41650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 42964508 - 42964556
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||||    
T  42964508 cgtgaacttatctcagttgataaggacaatgtataatatatgtaaggtt 42964556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 31979498 - 31979447
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  31979498 tcgtgaacttaacttagttggtagagacaatatatattatatgcaaggtttg 31979447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Complemental strand, 3573387 - 3573319
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgagtttaaatctcgacca 404  Q
    |||||| ||||||| ||||| |||| |||||  |||||||||| |||||||||||||||||| ||||||    
T  3573387 tcgtgagcttaactcagttggtaggaacaatgcataatatatgtaaggtttgagtttaaatcccgacca 3573319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 17201274 - 17201201
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgagtttaaatctcgacca 404  Q
    |||| ||||||||||| || ||||| ||||||||||| |||||||||  |||||||| ||| ||| ||||||||    
T  17201274 tgtcctcgtgaacttagctcagttggtagggacaatacataatatatttaaggtttgggttaaaacctcgacca 17201201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 17669645 - 17669692
Alignment:
Q  338 gtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||| ||| ||| |||||||||||||||| ||||||||||||||||||    
T  17669645 gtgagcttgactcagttgatagggacaatgtataatatatgcaaggtt 17669692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 16033518 - 16033465
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| |||||| ||| ||| ||||||||||||||||  ||||||||||||||||    
T  16033518 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggt 16033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 16967257 - 16967208
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||| |||| ||||||||||| |||||||  |||||||||||||||||    
T  16967257 tcgtgagcttagcttagttgatatggacaatgcataatatatgcaaggtt 16967208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 30279695 - 30279638
Alignment:
Q  324 atatttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    |||| |||||| |||||| |||| || |||||||||| |||||| |||||||||||||    
T  30279695 atatatatgtcctcgtgagcttagctcagttgataggtacaatacataatatatgcaa 30279638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 37013981 - 37014034
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| |||||| ||||||| ||||| ||||||||| |||||| |||||||||||    
T  37013981 tgtcctcgtgagcttaactcagttggtagggacaaaatataaaatatgcaaggt 37014034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 40535249 - 40535196
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    |||||| ||||||| ||||| ||||| ||||||| ||||||||||| |||||||    
T  40535249 tcgtgagcttaactcagttggtagggtcaatataaaatatatgcaaagtttgag 40535196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 2889989 - 2889941
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| ||||| ||||||||||  ||||||||||||||||    
T  2889989 tcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggt 2889941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 4806857 - 4806805
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||||||||| | ||||| ||| |||||| ||||||||||| ||||||||||    
T  4806857 cgtgaacttaattcagttggtagagacaatgtataatatatgtaaggtttgag 4806805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 8269431 - 8269383
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| || ||||| || |||||||| ||||||||||||||||    
T  8269431 tcgtgaacttagctcagttggtaaggacaatacataatatatgcaaggt 8269383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 9265903 - 9265851
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||| |||||||||||| ||||| || ||||||| ||||||| |||||||||    
T  9265903 gtcattgtgaacttaactcagttggtatggacaatgtataatacatgcaaggt 9265851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 389
Target Start/End: Complemental strand, 17651442 - 17651390
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||| ||||||| |||||||| |||||||| |||| ||||||||||| ||||    
T  17651442 cgtgagcttaactaagttgatatggacaatacataaaatatgcaaggtctgag 17651390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 339 - 387
Target Start/End: Complemental strand, 19533238 - 19533190
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||||| ||||||||||| |||||||  |||||||||||||| ||||    
T  19533238 tgaacttagcttagttgataaggacaatgcataatatatgcaagatttg 19533190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 26705598 - 26705646
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| |||||||| || | |||||| ||||||||||||||||    
T  26705598 tcgtgaacttagcttagttggtaagaacaatacataatatatgcaaggt 26705646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 29506825 - 29506873
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||||||||||    
T  29506825 tcgtgagcttaacttagttggtatagacaatacataatatatgcaaggt 29506873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 30937485 - 30937521
Alignment:
Q  348 cttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  30937485 cttagttgataaggacaatgtataatatatgcaaggt 30937521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 392
Target Start/End: Complemental strand, 17831 - 17778
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggtttgagttt 392  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||||||||    
T  17831 tgaacttaacttagttggtagggaaaatgcataatatatgcaaggtttgagttt 17778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 384
Target Start/End: Original strand, 29546888 - 29546939
Alignment:
Q  333 tcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| || ||||||| ||||||||||||||||| ||||||||||||||||    
T  29546888 tcatcgagagcttaactcagttgatagggacaatagataatatatgcaaggt 29546939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 8837909 - 8837966
Alignment:
Q  327 tttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||| ||||||||||||||  |||||||||||||||  ||||||||| ||||||    
T  8837909 tttatgtcctcgtgaacttaactcggttgatagggacaatgcataatatatacaaggt 8837966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 10982724 - 10982773
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||| ||||||| ||||| || ||||||||||||||||||||||||||    
T  10982724 tcgtgagcttaactcagttggtatggacaatatataatatatgcaaggtt 10982773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 30071579 - 30071526
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||||||||||||||||||||| | |||||  ||||||||| |||||||||||    
T  30071579 tcgtgaacttaacttagttgataagaacaatgcataatatatacaaggtttgag 30071526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 6394825 - 6394775
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    |||| ||||||||||| || ||||||||||||||| | |||||||||||||    
T  6394825 tgtcctcgtgaacttacctcagttgatagggacaaaacataatatatgcaa 6394775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 385
Target Start/End: Complemental strand, 29924985 - 29924931
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||| |||||||||||||||||||| || | |||||  |||||||||||||||||    
T  29924985 tgtcctcgtgaacttaacttagttgttaagaacaatgcataatatatgcaaggtt 29924931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 385
Target Start/End: Original strand, 31446374 - 31446416
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||| |||||||||||| ||||||||||| ||||||||||    
T  31446374 cttaactcagttgatagggataatatataatacatgcaaggtt 31446416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 377
Target Start/End: Complemental strand, 32319962 - 32319924
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatat 377  Q
    |||| |||||||||||||||||||||||| |||||||||    
T  32319962 tgaatttaacttagttgatagggacaatacataatatat 32319924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 384
Target Start/End: Original strand, 32421569 - 32421615
Alignment:
Q  338 gtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| ||||||| ||||| || |||||||||||||||||||||||||    
T  32421569 gtgagcttaactcagttggtatggacaatatataatatatgcaaggt 32421615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 42200730 - 42200672
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    |||| |||||| |||| || |||||||||||||||| ||||||||||||| ||| ||||    
T  42200730 tgtcctcgtgagcttagctcagttgatagggacaatgtataatatatgcatggtctgag 42200672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Complemental strand, 15079214 - 15079165
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggttt 386  Q
    ||||| ||||||| ||||| ||||||||||  ||||||||||||||||||    
T  15079214 cgtgagcttaactcagttggtagggacaatgcataatatatgcaaggttt 15079165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 28084280 - 28084329
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||| ||||||| ||||||||| ||||||  |||||||||||||||||    
T  28084280 tcgtgagcttaactcagttgatagagacaatgaataatatatgcaaggtt 28084329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 29716768 - 29716715
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||| ||||||| ||||| |||| |||||  ||||||||||||||||    
T  29716768 tgtcatcgtgagcttaactcagttggtaggaacaattcataatatatgcaaggt 29716715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Complemental strand, 17062402 - 17062354
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| ||||||||  ||||||| ||||||||||||||||    
T  17062402 tcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17062354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 17585956 - 17586004
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||| ||||||||  ||||||| ||||||||||||||||    
T  17585956 tcgtgagcttaactcagttgatatagacaatacataatatatgcaaggt 17586004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 36588160 - 36588108
Alignment:
Q  333 tcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    |||||||||||||| || ||||| |||| ||||| ||||||||||| ||||||    
T  36588160 tcatcgtgaacttagctcagttggtaggaacaatgtataatatatgtaaggtt 36588108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 332 - 404
Target Start/End: Complemental strand, 42541914 - 42541842
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgagtttaaatctcgacca 404  Q
    |||||||||| ||||| | ||||  |||  ||||||||||||||||||||| ||  |||||||||| ||||||    
T  42541914 gtcatcgtgagcttaattcagttagtagaaacaatatataatatatgcaagattgaagtttaaatcccgacca 42541842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 404
Target Start/End: Complemental strand, 4922468 - 4922402
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggtttga-gtttaaatctcgacca 404  Q
    ||||||||||||||||| |||||| ||| |||||||||||||| || ||| ||||||||| ||||||    
T  4922468 tgaacttaacttagttggtagggataatgtataatatatgcaacgtatgaggtttaaatcccgacca 4922402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 389
Target Start/End: Complemental strand, 15291758 - 15291700
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    |||| |||||| ||||||||||||| || |||||||  |||||||||||||||||||||    
T  15291758 tgtcctcgtgagcttaacttagttggtaaggacaatgaataatatatgcaaggtttgag 15291700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 14609974 - 14610027
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||||||||| || |||||||||||||||| ||||||||||| |||||    
T  14609974 tgtcattgtgaacttagctcagttgatagggacaatctataatatatgtaaggt 14610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 5954612 - 5954660
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    ||||||||| | ||||| ||| |||||||||||||||||||||||||||    
T  5954612 tgaacttaattcagttgttagagacaatatataatatatgcaaggtttg 5954660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 6160724 - 6160676
Alignment:
Q  343 cttaacttagttgatagggacaatatataatatatgcaaggtttgagtt 391  Q
    ||||||||||||| || ||||||| |||||||||||||||||| |||||    
T  6160724 cttaacttagttggtatggacaatgtataatatatgcaaggttggagtt 6160676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 381
Target Start/End: Original strand, 10664622 - 10664674
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||||||||||||||||| | |||||| |||| ||| |||||||||||||    
T  10664622 tatgtcatcgtgaacttaactcaattgataaggacgatacataatatatgcaa 10664674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 6003448 - 6003377
Alignment:
Q  332 gtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga-gtttaaatctcgac 402  Q
    |||||||| | |||| || ||||| |||| |||||||||||||||||  |||||||| ||||||||||||||    
T  6003448 gtcatcgtaagcttacctcagttggtaggaacaatatataatatatgttaggtttgaggtttaaatctcgac 6003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 3373450 - 3373393
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    ||||| ||||||| |||||| |||||||| |||||||  |||||||||||||| ||||    
T  3373450 atgtcttcgtgaatttaactcagttgatatggacaatgcataatatatgcaagatttg 3373393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 380
Target Start/End: Complemental strand, 6555583 - 6555534
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgca 380  Q
    ||||| |||||||||| || ||||| |||||||||| |||||||||||||    
T  6555583 tgtcaccgtgaacttagctcagttggtagggacaatgtataatatatgca 6555534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Complemental strand, 8916542 - 8916489
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| |||||| || |||| ||||| ||||||||||| ||||||||||||||||    
T  8916542 tgtcctcgtgagctaaactcagttggtagggacaatacataatatatgcaaggt 8916489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 12412270 - 12412323
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||| |||||| ||||||||||||| ||| ||||||  ||||||||||||||||    
T  12412270 tgtcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaaggt 12412323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 21598958 - 21599003
Alignment:
Q  339 tgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||||||||||||| || | |||||| ||||||||||||||||    
T  21598958 tgaacttaacttagttggtatgaacaatacataatatatgcaaggt 21599003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 378
Target Start/End: Original strand, 29069474 - 29069523
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatg 378  Q
    ||||||||||||| |||| || ||||||||||||||||  ||||||||||    
T  29069474 tatgtcatcgtgagcttagctcagttgatagggacaatgcataatatatg 29069523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 12602035 - 12602071
Alignment:
Q  348 cttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  12602035 cttagttggtagggacaatacataatatatgcaaggt 12602071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 17330032 - 17329988
Alignment:
Q  345 taacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||||||||| | ||||||||| |||||||||||||||| ||||    
T  17330032 taacttagttggtcgggacaatacataatatatgcaaggtctgag 17329988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 28898846 - 28898902
Alignment:
Q  328 ttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    ||||||| |||||| ||||||||||||| || |||||||  |||||||||| |||||    
T  28898846 ttatgtcctcgtgatcttaacttagttggtaaggacaatgcataatatatgaaaggt 28898902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 21136821 - 21136878
Alignment:
Q  328 ttatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||| |||||| ||||||| ||||| || ||||||| ||||||||||||||||||    
T  21136821 ttatgtcttcgtgagcttaactcagttggtatggacaatgtataatatatgcaaggtt 21136878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 387
Target Start/End: Complemental strand, 429241 - 429190
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttg 387  Q
    |||||| ||||||| |||||||| ||| |||| |||||||||||||||||||    
T  429241 tcgtgagcttaactcagttgatatggataatacataatatatgcaaggtttg 429190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 388
Target Start/End: Original strand, 38911298 - 38911349
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttga 388  Q
    ||||| ||||||| ||||||||  |||||| |||||||||||||||||||||    
T  38911298 cgtgagcttaactcagttgataaagacaatgtataatatatgcaaggtttga 38911349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 7720265 - 7720223
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatg 378  Q
    |||||||| ||||| |||||||| |||||||||||||||||||    
T  7720265 tcgtgaacctaactcagttgatatggacaatatataatatatg 7720223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 381
Target Start/End: Complemental strand, 28200453 - 28200403
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||||||| ||||||| ||||| |||| |||||| |||||||||||||    
T  28200453 tgtcatcgtgagcttaactcagttggtaggaacaatacataatatatgcaa 28200403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 25106058 - 25106107
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||| ||| |||||||| || | ||||||||||||||||||||||||    
T  25106058 tcgtgaatttatcttagttggtatgaacaatatataatatatgcaaggtt 25106107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 30622965 - 30623018
Alignment:
Q  331 tgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||||||||  |||||| | ||||| ||||||||| ||||||||||||||||    
T  30622965 tgtcatcgtgagtttaactcaattgattgggacaatacataatatatgcaaggt 30623018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 31723462 - 31723421
Alignment:
Q  341 aacttaacttagttgatagggacaatatataatatatgcaag 382  Q
    ||||||||| |||||||| | |||||||||||||||||||||    
T  31723462 aacttaactcagttgataagaacaatatataatatatgcaag 31723421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 341 - 377
Target Start/End: Original strand, 2959115 - 2959151
Alignment:
Q  341 aacttaacttagttgatagggacaatatataatatat 377  Q
    ||||||| | |||||||||||||||||||||||||||    
T  2959115 aacttaaatcagttgatagggacaatatataatatat 2959151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 27263340 - 27263388
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||||| ||||| || |||||||  |||||||||||||||||    
T  27263340 cgtgaacttaactcagttggtatggacaatgcataatatatgcaaggtt 27263388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 27270234 - 27270282
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||||||||||| ||||| || |||||||  |||||||||||||||||    
T  27270234 cgtgaacttaactcagttggtatggacaatgcataatatatgcaaggtt 27270282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 32315222 - 32315270
Alignment:
Q  337 cgtgaacttaacttagttgatagggacaatatataatatatgcaaggtt 385  Q
    ||||| ||||||| |||||||| ||||| || |||||||||||||||||    
T  32315222 cgtgagcttaactcagttgataaggacattacataatatatgcaaggtt 32315270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 39926608 - 39926556
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||||||||||| |||| || |||||||| |||||||  |||||||||||||    
T  39926608 tatgtcatcgtgagcttagctcagttgataaggacaatgcataatatatgcaa 39926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 119561 - 119612
Alignment:
Q  330 atgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaa 381  Q
    ||||| |||||| ||||||| |||||||||||||||| |||||||| |||||    
T  119561 atgtcctcgtgagcttaactcagttgatagggacaatgtataatatttgcaa 119612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1063 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 329 - 389
Target Start/End: Complemental strand, 1130 - 1070
Alignment:
Q  329 tatgtcatcgtgaacttaacttagttgatagggacaatatataatatatgcaaggtttgag 389  Q
    ||||||||||||| ||||||| ||||  ||||||||||  |||||||||| ||||| ||||    
T  1130 tatgtcatcgtgagcttaactcagttagtagggacaatgcataatatatgtaaggtctgag 1070  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 99035 - 99083
Alignment:
Q  336 tcgtgaacttaacttagttgatagggacaatatataatatatgcaaggt 384  Q
    |||||| ||| ||| ||||||||||||||||  ||||||||||||||||    
T  99035 tcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggt 99083  T

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