View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1249_low_63 (Length: 318)

Name: NF1249_low_63
Description: NF1249
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1249_low_63
NF1249_low_63
[»] chr7 (34 HSPs)
chr7 (72-231)||(38181750-38181909)
chr7 (155-233)||(11616632-11616709)
chr7 (155-226)||(44604437-44604508)
chr7 (157-226)||(2846637-2846706)
chr7 (113-233)||(7425794-7425915)
chr7 (155-226)||(29257624-29257695)
chr7 (155-233)||(33584633-33584709)
chr7 (160-233)||(30463086-30463159)
chr7 (155-233)||(5724667-5724744)
chr7 (155-233)||(37490577-37490655)
chr7 (155-233)||(47454074-47454152)
chr7 (159-230)||(5083435-5083506)
chr7 (155-233)||(32776053-32776132)
chr7 (155-226)||(45890817-45890888)
chr7 (160-233)||(36117732-36117805)
chr7 (157-233)||(46095382-46095457)
chr7 (162-233)||(2842018-2842089)
chr7 (155-233)||(23058889-23058966)
chr7 (155-233)||(2849325-2849403)
chr7 (155-226)||(48981733-48981804)
chr7 (155-233)||(27234573-27234650)
chr7 (155-233)||(29434540-29434617)
chr7 (160-233)||(34963772-34963845)
chr7 (159-224)||(40038072-40038137)
chr7 (157-233)||(17266097-17266173)
chr7 (174-233)||(18235260-18235319)
chr7 (155-233)||(34064285-34064363)
chr7 (155-226)||(49100462-49100532)
chr7 (155-208)||(8150053-8150107)
chr7 (160-233)||(31581409-31581480)
chr7 (176-233)||(23703986-23704043)
chr7 (180-224)||(19688038-19688082)
chr7 (169-233)||(32971991-32972055)
chr7 (155-227)||(42122249-42122321)
[»] chr5 (35 HSPs)
chr5 (113-233)||(42575556-42575676)
chr5 (155-233)||(39008202-39008280)
chr5 (155-233)||(3725256-3725334)
chr5 (155-233)||(8692778-8692856)
chr5 (155-233)||(33988270-33988348)
chr5 (155-233)||(35646049-35646127)
chr5 (155-233)||(41184730-41184808)
chr5 (155-226)||(17242914-17242985)
chr5 (155-233)||(7613777-7613855)
chr5 (155-233)||(11099437-11099515)
chr5 (155-233)||(22582832-22582910)
chr5 (155-233)||(36469054-36469132)
chr5 (155-231)||(25814436-25814512)
chr5 (159-223)||(35334490-35334554)
chr5 (155-222)||(42211410-42211477)
chr5 (155-233)||(858405-858483)
chr5 (155-233)||(36446647-36446725)
chr5 (160-233)||(8369665-8369734)
chr5 (173-232)||(33012425-33012484)
chr5 (155-233)||(32539732-32539810)
chr5 (160-233)||(16283552-16283625)
chr5 (161-233)||(6610907-6610979)
chr5 (159-223)||(15814722-15814786)
chr5 (155-230)||(4576370-4576445)
chr5 (155-233)||(13422318-13422395)
chr5 (155-233)||(15254835-15254913)
chr5 (155-233)||(39060382-39060460)
chr5 (155-233)||(39183587-39183665)
chr5 (164-233)||(4412451-4412520)
chr5 (163-231)||(28057798-28057866)
chr5 (155-231)||(35585576-35585652)
chr5 (155-233)||(5357777-5357855)
chr5 (159-233)||(17935293-17935366)
chr5 (160-231)||(7311147-7311216)
chr5 (160-231)||(35666957-35667026)
[»] chr6 (11 HSPs)
chr6 (155-233)||(31265849-31265927)
chr6 (155-233)||(3604559-3604637)
chr6 (155-233)||(15081493-15081571)
chr6 (160-233)||(14312612-14312685)
chr6 (155-233)||(4238491-4238567)
chr6 (175-233)||(14306220-14306278)
chr6 (158-233)||(30063911-30063986)
chr6 (169-231)||(4611341-4611402)
chr6 (155-233)||(9755106-9755184)
chr6 (163-232)||(7739485-7739554)
chr6 (160-233)||(33921433-33921506)
[»] chr4 (49 HSPs)
chr4 (155-233)||(18849718-18849796)
chr4 (157-226)||(42185757-42185826)
chr4 (155-233)||(41203807-41203885)
chr4 (155-226)||(42024160-42024231)
chr4 (155-226)||(49306664-49306735)
chr4 (156-233)||(49448911-49448988)
chr4 (155-226)||(26185259-26185330)
chr4 (155-226)||(41710103-41710174)
chr4 (155-233)||(4360367-4360445)
chr4 (155-233)||(8295099-8295177)
chr4 (155-223)||(1825205-1825273)
chr4 (155-233)||(28974376-28974454)
chr4 (155-233)||(39979850-39979928)
chr4 (155-233)||(22872345-22872425)
chr4 (173-233)||(283454-283514)
chr4 (155-231)||(38977064-38977140)
chr4 (160-231)||(49812301-49812372)
chr4 (159-232)||(30568734-30568807)
chr4 (155-224)||(41371251-41371320)
chr4 (160-233)||(42367859-42367932)
chr4 (155-226)||(33047569-33047640)
chr4 (157-233)||(39976355-39976427)
chr4 (159-233)||(4357637-4357711)
chr4 (155-233)||(16493257-16493334)
chr4 (155-233)||(17237113-17237191)
chr4 (155-197)||(27655263-27655305)
chr4 (155-229)||(31862863-31862937)
chr4 (155-233)||(34021107-34021185)
chr4 (155-233)||(41436551-41436629)
chr4 (155-233)||(42670342-42670420)
chr4 (155-233)||(45290107-45290184)
chr4 (155-233)||(3686081-3686161)
chr4 (161-233)||(42051621-42051693)
chr4 (158-233)||(27977217-27977292)
chr4 (160-231)||(52676995-52677066)
chr4 (157-226)||(21240970-21241040)
chr4 (155-233)||(43334982-43335060)
chr4 (155-232)||(27790380-27790456)
chr4 (159-208)||(38160115-38160164)
chr4 (164-233)||(54729452-54729521)
chr4 (160-233)||(8065603-8065684)
chr4 (181-233)||(9093747-9093799)
chr4 (155-230)||(2906736-2906811)
chr4 (155-230)||(47787806-47787881)
chr4 (155-233)||(34790910-34790988)
chr4 (155-204)||(43421392-43421441)
chr4 (155-231)||(35909532-35909608)
chr4 (155-219)||(39258229-39258292)
chr4 (155-203)||(48400590-48400638)
[»] chr1 (47 HSPs)
chr1 (155-226)||(32348295-32348366)
chr1 (155-233)||(49945002-49945080)
chr1 (155-233)||(52432382-52432460)
chr1 (159-226)||(28839416-28839483)
chr1 (155-233)||(5040535-5040613)
chr1 (155-233)||(5442410-5442488)
chr1 (159-226)||(45889211-45889279)
chr1 (155-226)||(8327794-8327865)
chr1 (155-233)||(36467155-36467233)
chr1 (155-233)||(50267398-50267476)
chr1 (155-233)||(28908157-28908237)
chr1 (159-226)||(3555519-3555586)
chr1 (155-233)||(8773312-8773391)
chr1 (159-226)||(51749147-51749214)
chr1 (155-233)||(42926204-42926282)
chr1 (157-210)||(51848654-51848707)
chr1 (155-231)||(27391419-27391495)
chr1 (155-231)||(32587837-32587913)
chr1 (162-233)||(17724681-17724752)
chr1 (155-233)||(46496088-46496164)
chr1 (155-226)||(49494123-49494194)
chr1 (155-233)||(13500687-13500767)
chr1 (176-233)||(17342898-17342955)
chr1 (161-233)||(28277001-28277076)
chr1 (160-233)||(46536410-46536483)
chr1 (155-231)||(3718810-3718885)
chr1 (161-233)||(26040739-26040811)
chr1 (155-227)||(46880491-46880563)
chr1 (155-231)||(52830374-52830450)
chr1 (159-233)||(10370148-10370223)
chr1 (170-233)||(26756046-26756109)
chr1 (161-232)||(40019830-40019901)
chr1 (155-233)||(27209927-27210005)
chr1 (155-233)||(27698874-27698952)
chr1 (164-230)||(48242559-48242625)
chr1 (155-204)||(11324332-11324381)
chr1 (155-204)||(11482353-11482402)
chr1 (160-232)||(37525111-37525181)
chr1 (155-223)||(4659511-4659579)
chr1 (169-233)||(19532893-19532957)
chr1 (155-231)||(28706583-28706659)
chr1 (157-208)||(16451686-16451737)
chr1 (157-208)||(16460839-16460890)
chr1 (156-231)||(36784386-36784461)
chr1 (155-231)||(2571435-2571510)
chr1 (160-233)||(16040147-16040220)
chr1 (155-227)||(43895923-43895994)
[»] scaffold0006 (1 HSPs)
scaffold0006 (155-233)||(229893-229970)
[»] chr8 (37 HSPs)
chr8 (155-233)||(5392119-5392197)
chr8 (155-233)||(44790381-44790459)
chr8 (155-233)||(5962432-5962510)
chr8 (155-233)||(32241383-32241461)
chr8 (155-224)||(28802846-28802915)
chr8 (155-233)||(33190868-33190946)
chr8 (155-231)||(139094-139170)
chr8 (169-233)||(29730869-29730933)
chr8 (155-226)||(42558542-42558611)
chr8 (171-231)||(45425557-45425617)
chr8 (155-233)||(38252396-38252475)
chr8 (155-213)||(33925060-33925118)
chr8 (155-233)||(42412342-42412420)
chr8 (155-208)||(37219720-37219773)
chr8 (155-231)||(12653759-12653835)
chr8 (155-227)||(29615874-29615946)
chr8 (157-233)||(21587347-21587419)
chr8 (155-233)||(32967236-32967314)
chr8 (169-231)||(39171615-39171677)
chr8 (155-231)||(7258326-7258402)
chr8 (169-233)||(9014773-9014837)
chr8 (169-233)||(13084921-13084985)
chr8 (155-231)||(31410567-31410643)
chr8 (155-233)||(2195538-2195616)
chr8 (160-231)||(22324919-22324990)
chr8 (160-233)||(2349420-2349494)
chr8 (155-226)||(3384611-3384684)
chr8 (169-226)||(31132807-31132864)
chr8 (162-210)||(4274265-4274313)
chr8 (169-213)||(12957954-12957998)
chr8 (160-227)||(15559094-15559161)
chr8 (159-233)||(4480433-4480506)
chr8 (155-224)||(27973645-27973714)
chr8 (155-224)||(28030914-28030983)
chr8 (155-233)||(7042822-7042902)
chr8 (158-233)||(40077712-40077787)
chr8 (158-226)||(40316551-40316619)
[»] chr2 (41 HSPs)
chr2 (155-233)||(28527034-28527112)
chr2 (113-233)||(28572278-28572397)
chr2 (159-226)||(28301511-28301578)
chr2 (169-233)||(2882055-2882119)
chr2 (155-233)||(565159-565237)
chr2 (117-231)||(5211879-5211993)
chr2 (155-233)||(15859304-15859382)
chr2 (155-226)||(33755334-33755405)
chr2 (155-233)||(36155583-36155662)
chr2 (155-233)||(28108334-28108412)
chr2 (155-233)||(28925807-28925885)
chr2 (157-223)||(30757529-30757595)
chr2 (160-233)||(3100470-3100543)
chr2 (156-233)||(44534443-44534520)
chr2 (159-226)||(37247847-37247914)
chr2 (155-233)||(33602185-33602263)
chr2 (160-233)||(36103265-36103338)
chr2 (155-224)||(40965093-40965162)
chr2 (169-233)||(24775781-24775845)
chr2 (155-231)||(43077685-43077761)
chr2 (158-233)||(23685029-23685104)
chr2 (166-233)||(36396428-36396495)
chr2 (155-233)||(3123716-3123794)
chr2 (155-233)||(18181172-18181250)
chr2 (156-233)||(39807283-39807360)
chr2 (155-231)||(2756746-2756822)
chr2 (155-231)||(45464174-45464250)
chr2 (155-202)||(9472523-9472570)
chr2 (155-233)||(10818691-10818770)
chr2 (155-233)||(13375147-13375226)
chr2 (155-233)||(8550601-8550679)
chr2 (155-233)||(9724948-9725026)
chr2 (159-229)||(31545981-31546051)
chr2 (155-233)||(38280155-38280233)
chr2 (156-227)||(10394243-10394314)
chr2 (171-233)||(435053-435115)
chr2 (155-233)||(2048362-2048440)
chr2 (155-232)||(32556243-32556318)
chr2 (155-232)||(44736939-44737014)
chr2 (155-208)||(18460583-18460636)
chr2 (169-233)||(7649949-7650012)
[»] scaffold0034 (1 HSPs)
scaffold0034 (155-231)||(98897-98973)
[»] chr3 (39 HSPs)
chr3 (157-233)||(5245482-5245558)
chr3 (155-223)||(26134662-26134730)
chr3 (155-231)||(43639475-43639551)
chr3 (112-229)||(39364953-39365071)
chr3 (155-233)||(54122183-54122261)
chr3 (155-231)||(21296462-21296538)
chr3 (155-233)||(2868644-2868722)
chr3 (155-233)||(9017871-9017949)
chr3 (159-233)||(11251090-11251164)
chr3 (157-233)||(36097616-36097692)
chr3 (155-233)||(32023059-32023138)
chr3 (155-233)||(32827263-32827341)
chr3 (155-233)||(33994727-33994805)
chr3 (155-233)||(39866512-39866590)
chr3 (155-231)||(54783035-54783111)
chr3 (163-226)||(1772073-1772136)
chr3 (155-233)||(14756073-14756151)
chr3 (155-233)||(52325247-52325325)
chr3 (155-233)||(26142969-26143049)
chr3 (169-233)||(8706216-8706280)
chr3 (169-233)||(9058103-9058167)
chr3 (155-231)||(10855066-10855142)
chr3 (155-214)||(15280693-15280752)
chr3 (160-231)||(51636860-51636931)
chr3 (155-221)||(12745045-12745110)
chr3 (155-233)||(17776953-17777031)
chr3 (155-233)||(19078254-19078332)
chr3 (155-231)||(41031647-41031723)
chr3 (159-231)||(53876399-53876471)
chr3 (157-233)||(54845477-54845553)
chr3 (169-233)||(55415412-55415476)
chr3 (159-233)||(54458271-54458346)
chr3 (155-205)||(17274779-17274829)
chr3 (157-223)||(49408589-49408655)
chr3 (155-208)||(49006292-49006344)
chr3 (169-225)||(45241089-45241145)
chr3 (155-233)||(9218215-9218293)
chr3 (155-197)||(22202326-22202368)
chr3 (172-233)||(53754040-53754101)
[»] scaffold0321 (1 HSPs)
scaffold0321 (156-223)||(9511-9579)
[»] scaffold0028 (1 HSPs)
scaffold0028 (157-200)||(26709-26752)
[»] scaffold0058 (1 HSPs)
scaffold0058 (155-233)||(14526-14604)
[»] scaffold0007 (1 HSPs)
scaffold0007 (159-233)||(230326-230399)
[»] scaffold0227 (1 HSPs)
scaffold0227 (155-208)||(8961-9014)
[»] scaffold0001 (1 HSPs)
scaffold0001 (159-199)||(394877-394917)


Alignment Details
Target: chr7 (Bit Score: 88; Significance: 3e-42; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 72 - 231
Target Start/End: Original strand, 38181750 - 38181909
Alignment:
Q  72 atatcttgtcaaaatccttgaaattaaaattcaattagatatactccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaa 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||            |||||| ||||||| ||    
T  38181750 atatcttgtcaaaatccttgaaattaaaattcaattagatatactccctcagtcccgagttagctgagccattttttcttttcacacatgttaagactaa 38181849  T
Q  172 tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    | |||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  38181850 tatataaatgaaagagagagaaaaatggttttaagtgttcttggtaagtattggtgcatt 38181909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 11616709 - 11616632
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  11616709 acacatattaaaa-aaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtgcattct 11616632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 44604437 - 44604508
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||    
T  44604437 acacatattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttcttgttaagtattggt 44604508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 2846637 - 2846706
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||||    
T  2846637 acatattaagacaaatgtataaatgaacgagagagaaaaatagttttaagtgctcttgttaagtattggt 2846706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 113 - 233
Target Start/End: Original strand, 7425794 - 7425915
Alignment:
Q  113 tactccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctct 212  Q
    ||||||||||||||||||||||| ||||||            |||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||    
T  7425794 tactccctccgtcccgaattagctgagccattttttcatttcacacgtattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgttct 7425893  T
Q  213 tg-gtaagtattggtgcattct 233  Q
    ||  ||||||||||||||||||    
T  7425894 tgtttaagtattggtgcattct 7425915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 29257695 - 29257624
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||| |||||||    
T  29257695 acacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggt 29257624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 33584709 - 33584633
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||    
T  33584709 acacatattaagaca--tgtataaatgaaggagagagaaaaatggttttaagtgctattgttaagtattggtgtattct 33584633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 30463159 - 30463086
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| ||||||||||||||| |||| |||||||| ||||||||||| |||| ||||||||||||||||||    
T  30463159 tattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtgcattct 30463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 5724667 - 5724744
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| |||||||| |||||||||    
T  5724667 acacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgc-cttgttaagtattagtgcattct 5724744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 37490577 - 37490655
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| |||||| |||||||||||||||||||| ||||||||| ||||||||| | ||  ||||||||||||||||||    
T  37490577 acacatgttaagaaaaatgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattct 37490655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 47454152 - 47454074
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| ||||||||||||||| || ||||| ||||||||||| |||| ||||||||||||||||||    
T  47454152 acacgtattaagaaaaatatataaatgaaggagagagtaaaatagttttaagtgcacttgttaagtattggtgcattct 47454074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 5083435 - 5083506
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcat 230  Q
    ||||||| |||||||||||||| ||||| | | |||||| |||||||||||||||| |||||||||||||||    
T  5083435 atattaaaacaaatgtataaataaaggaaagataaaaatagttttaagtgctcttgttaagtattggtgcat 5083506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 32776132 - 32776053
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||| ||||||||| |||||||||||||| |||||  ||| ||||||||||||||||||    
T  32776132 acacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattct 32776053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 45890817 - 45890888
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| |||||||| ||||||||||| |||||||| |||||||||||||||| |||| ||| |||||||||||    
T  45890817 acacgtattaagaaaaatgtataaaagaaggagagagaaaaatggttttaaatgcttttgttaagtattggt 45890888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 36117805 - 36117732
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||||||||||| ||||| | |||||||| ||||||||||| |||| |||||||| |||||||||    
T  36117805 tattaagaaaaatgtataaataaaggaaagagaaaaatagttttaagtgcacttgttaagtatttgtgcattct 36117732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 46095382 - 46095457
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| |||||||||||| ||||||| | |||||||||||| |||||||||| ||| |||| |||||||||    
T  46095382 acatattaagaaaaatgtataaataaaggagaaa-aaaaatggttttgagtgctcttgttaaatatttgtgcattct 46095457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 2842018 - 2842089
Alignment:
Q  162 ttaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| |||||||||||||||||||| ||||||||||| ||||||| | |||  |||||||| ||||||||    
T  2842018 ttaagaaaaatgtataaatgaaggagagagaaaaatggtgttaagtgttattgtcaagtattgatgcattct 2842089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 23058966 - 23058889
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| |||||||||| |||| |||||||| |||||||||| ||||| || |||||||||||||||    
T  23058966 acacgtattaagaaaaatatataaatgaaagagagagaaaaatagttttaagtgttcttgtta-gtattggtgcattct 23058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2849403 - 2849325
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggt-aagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||| |||| |||||||| |||||  ||| |||| || |||||||||||||||||    
T  2849403 acacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttgcgtg-tctttgtcaagtattggtgcattct 2849325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 48981804 - 48981733
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| |||||||| |||||||||||||||| ||| |||||||| ||||||| ||| |||| || ||||||||    
T  48981804 acacgtattaagataaatgtataaatgaagaagaaagaaaaatagttttaaatgcacttgttatgtattggt 48981733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 27234650 - 27234573
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||| || | || ||||| |||||||||| | ||| ||||||||| ||||||||    
T  27234650 acacatattaagaaaaatgtataaatgaatgacagag-aaaattgttttaagtgtttttgttaagtattgatgcattct 27234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 29434540 - 29434617
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| || | | ||||||||| ||| |||||||| |||||||||||| ||| |||||||||||| |||||    
T  29434540 acacatattaagaaaattttttaaatgaag-agagagaaaaatagttttaagtgcttttgttaagtattggtggattct 29434617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 34963772 - 34963845
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| ||||||||||||||  |||  |||||||| ||||||||||  |||| ||| ||||||||||||||    
T  34963772 tattaagaaaaatgtataaatgatagagggagaaaaatagttttaagtgaacttgttaaatattggtgcattct 34963845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 40038072 - 40038137
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    ||||||||| |||||||||||||||||| | ||||||||  |||||| || ||||| |||||||||    
T  40038072 atattaagataaatgtataaatgaaggaaagagaaaaataattttaaatgatcttgttaagtattg 40038137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 17266173 - 17266097
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| |||||| |||  |||| ||| ||||||||||||| ||||| | ||  ||||||||||||||||||    
T  17266173 acatattaagaaaaatgtgtaagcgaagaagagagaaaaatggtttaaagtgtttttattaagtattggtgcattct 17266097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 233
Target Start/End: Complemental strand, 18235319 - 18235260
Alignment:
Q  174 tataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||| | ||||||  |||||| ||| |||| ||||||||||||||||||    
T  18235319 tataaatgaaggagagaaaaaaataattttaaatgcacttgttaagtattggtgcattct 18235260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 34064363 - 34064285
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| | ||| ||||||||||||  ||| |||||||| ||||| |||| ||||| ||||||||||||||||||    
T  34064363 acacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtg-tcttgttaagtattggtgcattct 34064285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 49100462 - 49100532
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| |||||||| ||||||||||||||| || | |||||||| | ||||||||| |||| |||||||||||    
T  49100462 acacgtattaagaaaaatgtataaatgaaagacagagaaaaatag-tttaagtgcacttgttaagtattggt 49100532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 8150107 - 8150053
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||||||| ||| ||||||| |||| |||| |||||||||||||||||||    
T  8150107 acacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtg 8150053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 31581409 - 31581480
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||||||  ||||||||||| | |||||| ||||||||| |  ||| ||||||||||||||||||    
T  31581409 tattaagaaaaatgta--aatgaaggagagataaaaatagttttaagtacatttgttaagtattggtgcattct 31581480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 23704043 - 23703986
Alignment:
Q  176 taaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||| |||||||| || |||| ||| ||||| ||||||||    
T  23704043 taaatgaaggagagagaaaaatagttttaagcgcacttgttaattattgctgcattct 23703986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 19688082 - 19688038
Alignment:
Q  180 tgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    ||||||||||||||||||| ||||||||| |||||  ||||||||    
T  19688082 tgaaggagatagaaaaatgtttttaagtgttcttgtcaagtattg 19688038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 32971991 - 32972055
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||| |||| |||| |||||||||||||| ||||| |||   || ||||||||||||||    
T  32971991 aaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattct 32972055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 42122321 - 42122249
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    ||||||||||||  |||||||||| ||||  ||| | ||| ||| ||||||||||||||| ||| ||||||||    
T  42122321 acacatattaaggaaaatgtataagtgaaatagagaaaaagatgattttaagtgctcttgttaaatattggtg 42122249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 113 - 233
Target Start/End: Original strand, 42575556 - 42575676
Alignment:
Q  113 tactccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctct 212  Q
    ||||||||||||||||||||||| ||||||            ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  42575556 tactccctccgtcccgaattagctgagccattttttcatttcacacatattaagacaaatgtataaatgaatgagagagaaaaatggttttaagtgctct 42575655  T
Q  213 tggtaagtattggtgcattct 233  Q
    ||||||||||||||| |||||    
T  42575656 tggtaagtattggtgtattct 42575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 39008280 - 39008202
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||    
T  39008280 acacatattaaaacaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggttcattct 39008202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 3725334 - 3725256
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  3725334 acacatattaagaaaaatgtataaaggaaggagagagaaaaatggttttaagtgctattgttaagtattggtgcattct 3725256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 8692778 - 8692856
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||| ||||||||||||||||||    
T  8692778 acacatattaagacaaatatataaatgaaggagggagaaaaatggttttaagtgttcttgttaagtattggtgcattct 8692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 33988348 - 33988270
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||| |||||    
T  33988348 acacatattaagacaaatgtataaatgaaggagaaagaaaaatggttttaagtgtttttgttaagtattggtgtattct 33988270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 35646049 - 35646127
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||| |||||||||| |||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  35646049 acacatattaagacaaatatataaatgaatgagagagaaaaatgattttaagtgatcttgttaagtattggtgcattct 35646127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 41184808 - 41184730
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||    
T  41184808 acacgtattaagaaaaatgtataaatgaaggagaaagaaaaatagttttaagtgcacttgttaagtattggtgcattct 41184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 17242914 - 17242985
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||| ||| |||||| |||||||||||    
T  17242914 acacatattaagacaaatgtataaatgaatgagagagaaaaatggtttttagtactcttgttaagtattggt 17242985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 7613855 - 7613777
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||| ||||| | |||||||| ||||||||||| |||| ||||||||||||||||||    
T  7613855 acacatattaagaaaaatgtataaattaaggaaagagaaaaatagttttaagtgcacttgttaagtattggtgcattct 7613777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 11099437 - 11099515
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||| |||| |||||||| |||||||||| | ||| ||||||||||||||||||    
T  11099437 acacatattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattct 11099515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 22582832 - 22582910
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||| ||||||||||  ||| ||||||||| ||||||||||||||| |||||| || ||||||||    
T  22582832 acacatattaagacaaatatataaatgaataagagagaaaaatgattttaagtgctcttgttaagtaatgatgcattct 22582910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 36469054 - 36469132
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| || |||||| | ||| || |||||||||||||||    
T  36469054 acacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtattggtgcattct 36469132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 25814512 - 25814436
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||| ||||||||||| ||||    
T  25814512 acacgtattaagaaaaatgcataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtacatt 25814436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 35334490 - 35334554
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||  ||||||||    
T  35334490 atattaagacaaatatataaatgaaggagagagaaaaatagttttaagtgctcttattaagtatt 35334554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 222
Target Start/End: Complemental strand, 42211477 - 42211410
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtat 222  Q
    ||||||||||| | ||||||||||||||||| |  ||||||||||||||||||||||||| |||||||    
T  42211477 acacatattaaaaaaaatgtataaatgaaggtgggagaaaaatggttttaagtgctcttgttaagtat 42211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 858483 - 858405
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||| ||||||| | ||||||||||||||||  ||||| ||| ||||||| ||||||    
T  858483 acacatattaagaaaaatgtataaataaaggagagaaaaaaatggttttaagttatcttgttaaatattggtacattct 858405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 36446647 - 36446725
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| || |||||| | ||| || ||||| |||||||||    
T  36446647 acacatattaagaaaaatgtataaatgaaggagataaaaaaatgattataagtgtttttgttatgtatttgtgcattct 36446725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 8369665 - 8369734
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||||||||    ||||| |||||||| ||||||| |||||||| ||||||||||||||||||    
T  8369665 tattaagacaaatgtataaa----ggagagagaaaaattgttttaaatgctcttgttaagtattggtgcattct 8369734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 33012484 - 33012425
Alignment:
Q  173 gtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    |||||||||||| ||| | ||||||||||||||||||||||| |||||||| ||||||||    
T  33012484 gtataaatgaagaagagataaaaatggttttaagtgctcttgttaagtatttgtgcattc 33012425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 32539810 - 32539732
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||| ||||| |||||||| | ||| ||||||||||||||| ||  || |||||||||||||||    
T  32539810 acacatattaagataaatgaataaacgaaggagagacaaagatggttttaagtgcttttattatgtattggtgcattct 32539732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 16283552 - 16283625
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| | |||||||||||||||||||| | |||||||||||||| || | ||| || |||||||||||||||    
T  16283552 tattaaaaaaaatgtataaatgaaggagagaaaaaaatggttttaaatgattttgttatgtattggtgcattct 16283625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 6610979 - 6610907
Alignment:
Q  161 attaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||| |||||||| ||||||||||| |||||||||  |||||||| | ||  ||||||||||||||||||    
T  6610979 attaagaaaaatgtatcaatgaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcattct 6610907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 15814786 - 15814722
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    ||||||| | |||||||||||||||||||| ||||||||  ||||||| ||||||| ||||||||    
T  15814786 atattaaaaaaaatgtataaatgaaggagagagaaaaattattttaagcgctcttgttaagtatt 15814722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 4576370 - 4576445
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcat 230  Q
    ||||||||||||| |||||||||||||||  | | |||||||  |||||||||| |||||  ||||||||||||||    
T  4576370 acacatattaagaaaaatgtataaatgaaaaaaagagaaaaacagttttaagtgttcttgtcaagtattggtgcat 4576445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 13422318 - 13422395
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||  |||||||||| |||||||||| |||||||||| | | || ||||| |||||||||    
T  13422318 acacatattaagaaaaatgtattgatgaaggagaaagaaaaatgg-tttaagtgctttcgttatgtatttgtgcattct 13422395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 15254913 - 15254835
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||| |||| | ||||||||| ||||||||| | ||| || ||||| |||||||||    
T  15254913 acacgtattaagaaaaatgtataaatggaggaaaaagaaaaatgattttaagtgtttttgttatgtattagtgcattct 15254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 39060382 - 39060460
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| ||| | ||||||||| |||||||||||||| |||||  ||| ||||||||||| ||||||    
T  39060382 acacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattct 39060460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 39183587 - 39183665
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||  ||| | ||||||| ||||||||||| | | ||||||||| || |||||    
T  39183587 acacatattaagaaaaatgtataaatgaaaaagagataaaaatgattttaagtgctttcgttaagtattgatgaattct 39183665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 4412520 - 4412451
Alignment:
Q  164 aagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||||||||||||||| ||||||||| | ||||||   |||| ||||||||| ||||||||    
T  4412520 aagaaaaatgtataaatgaaggagagagaaaaatgatattaagtctacttgttaagtattgatgcattct 4412451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 28057798 - 28057866
Alignment:
Q  163 taagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||| |||||||||||||||||||| ||||||||  |||||| ||  |||| ||||||||| ||||||    
T  28057798 taagaaaaatgtataaatgaaggagagagaaaaataattttaaatgtacttgttaagtattgatgcatt 28057866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 35585576 - 35585652
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| |||||||||||||  ||| | ||||||||| |||||| |  ||||| ||||||||| ||||||    
T  35585576 acacatattaagaaaaatgtataaatgggggaaaaagaaaaatgattttaaatattcttgttaagtattgatgcatt 35585652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 5357777 - 5357855
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| ||| | ||||||||| |||||||||||||| ||||   ||| ||||||||||| ||||||    
T  5357777 acacttattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtctttgttaagtattggttcattct 5357855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 17935366 - 17935293
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| ||||||||||||||||| || | |||||| | |||||||| ||||| ||| |||| |||||||||    
T  17935366 atattaagaaaaatgtataaatgaaggtgaga-aaaaataggtttaagtgttcttgttaaatattagtgcattct 17935293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 7311147 - 7311216
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||||||| ||| || ||||  |||||||||||||||||||||||   ||||||| |||||||    
T  7311147 tattaagaaaaatgtattaataaaagaga--gaaaaatggttttaagtgctcttatcaagtatttgtgcatt 7311216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 35667026 - 35666957
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||| ||| | |||||||||  ||||||| |||||||||||| ||  ||||||||||||||||    
T  35667026 tattaagaaaaatttattattgaaggaga--gaaaaatagttttaagtgcttttcttaagtattggtgcatt 35666957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 31265927 - 31265849
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  31265927 acacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattct 31265849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 3604559 - 3604637
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||| |||||| ||||||||||||||||||    
T  3604559 acacatattaagacaaatgtataaataaaagagagagaaaaatggttttaagttctcttgttaagtattggtgcattct 3604637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 15081571 - 15081493
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||||||| || |||||||| ||||||||||| |||| |||||||| |||||||||    
T  15081571 acacgtattaagaaaaatgtataaatgaaggtgagagaaaaatagttttaagtgcacttgttaagtatttgtgcattct 15081493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 14312612 - 14312685
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| | ||||| |||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  14312612 tattaataaaaatgcataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtgcattct 14312685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 4238567 - 4238491
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||| ||||||||||||||| ||||  |||| || |||||||||||||||| ||||||||||||||||||    
T  4238567 acacatatcaagataaatgtataaatgaaagaga--gaaatatagttttaagtgctcttgttaagtattggtgcattct 4238491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 14306220 - 14306278
Alignment:
Q  175 ataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||| ||||||||||||||||||||| | ||| ||||||||||||||||||    
T  14306220 ataaatgaaggacatagaaaaatggttttaagtgtttttgttaagtattggtgcattct 14306278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 30063911 - 30063986
Alignment:
Q  158 catattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||  |||||||||||||||||||| |||||||  |||||||||||| ||  |||||||| ||| |||||    
T  30063911 catattaaggaaaatgtataaatgaaggagaaagaaaaaaagttttaagtgcttttattaagtatttgtgtattct 30063986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 4611402 - 4611341
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||||||||||||| | |||||| || ||||||||||| ||| ||||||||||||||||    
T  4611402 aaatgtataaatgaaggatagagaaaa-tgattttaagtgcttttgttaagtattggtgcatt 4611341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 9755106 - 9755184
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| ||||||||||| ||| |||||||| ||||||||| | | || ||||||||||| ||||||    
T  9755106 acacgtattaagaaaaatatataaatgaagaagagagaaaaatagttttaagttcacgtgttaagtattggtacattct 9755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 7739485 - 7739554
Alignment:
Q  163 taagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||| |||||||||| |||| ||||||||||||| |||| || || | ||| ||||||||| |||||||    
T  7739485 taagaaaaatgtataagtgaaagagatagaaaaatagtttaaaatgtttttgttaagtattgatgcattc 7739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 33921433 - 33921506
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||| ||| | ||||||||| |||||||||||||| ||||   ||| ||||||||||| ||||||    
T  33921433 tattaagaaaaatatattagtgaaggagagagaaaaatggttttgagtgtgtttgttaagtattggtccattct 33921506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 18849718 - 18849796
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  18849718 acacatattaagacaaatgtataaatgaaggagaaagaaatatggttttaagtgctcttgttaagtattggtgcattct 18849796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 157 - 226
Target Start/End: Original strand, 42185757 - 42185826
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  42185757 acatattaagacaaatgtataaatgaaggagatagaaaaatgattttaagtgctcttgttaagtattggt 42185826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 41203885 - 41203807
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  41203885 acacgtattaagaaaaatgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattct 41203807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 42024160 - 42024231
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||||||||    
T  42024160 acacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaactactcttgttaagtattggt 42024231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 49306735 - 49306664
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  49306735 acacattttaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattggt 49306664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 49448988 - 49448911
Alignment:
Q  156 cacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||  ||||||| |||||||||    
T  49448988 cacatattaagaaaaatgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattct 49448911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 26185330 - 26185259
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||| |||||||||||    
T  26185330 acacatatcaagacaaatgtataaatgaaggagagagaaaaatggttttaaatactcttgttaagtattggt 26185259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 41710103 - 41710174
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||| |||||||    
T  41710103 acacatattaagacaaatgtataaatgaagcagagaaaaaaatggttttaagtgctcttgttaattattggt 41710174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 4360367 - 4360445
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||||||| || | ||||||||||||||||||||| ||| ||||||||||||||||||    
T  4360367 acacatattaagaaaaaagtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgcattct 4360445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 8295177 - 8295099
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||| ||||||| ||||||||||||||| |||| |||||||| ||||||||| |||||| ||||||||||||||||||    
T  8295177 acacaaattaagaaaaatgtataaatgaaagagagagaaaaattgttttaagtcctcttgataagtattggtgcattct 8295099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 1825205 - 1825273
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    ||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| |||| ||||||||    
T  1825205 acacatattaagaaaaatgtataaataaaggagatagaaaaatagttttaagtgcacttgttaagtatt 1825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 28974454 - 28974376
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||||||||||||||||| | || | |||| |||||||||||| | ||| ||||||||||||||||||    
T  28974454 acacatattaagacaaatgtataaatgaaagggagataaaagtggttttaagtgttgttgttaagtattggtgcattct 28974376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 39979928 - 39979850
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||| ||| |||||||| ||||||||||| |||| ||||||| ||||||||||    
T  39979928 acacgtattaagaaaaatgtataaatgaagtagaaagaaaaatagttttaagtgcacttgttaagtatcggtgcattct 39979850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 22872345 - 22872425
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctc--ttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||||  |||  |||||||||||||||||    
T  22872345 acacatattaagaaaaatgtataagtgaagaagagagaaaaatggttttaagtgctcgtttgtcaagtattggtgcattct 22872425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 283454 - 283514
Alignment:
Q  173 gtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||| |||||||||    
T  283454 gtataaatgaaggagagagaaaaattgttttaagtgctcttgttaagtatttgtgcattct 283514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 38977140 - 38977064
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| |||||||||||||||| ||| |||||||| ||||||||||| |||  ||||||||||||||||    
T  38977140 acacgtattaagaaaaatgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtgcatt 38977064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 49812372 - 49812301
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||| ||||||||||||||| | |||||| ||||||||||| |||| ||||||||||||||||    
T  49812372 tattaagaaaaatttataaatgaaggagagaaaaaaatagttttaagtgcacttgttaagtattggtgcatt 49812301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 30568807 - 30568734
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||||||| ||||||||||| |||||| | ||||||||||||||||||| | ||| |||||||| ||||||||    
T  30568807 atattaagaaaaatgtataaaggaaggaaagagaaaaatggttttaagtgttattgttaagtattagtgcattc 30568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 41371251 - 41371320
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    |||||||||||||||||| ||||||||||||||  | |||||| |||||||||||||||| |||| ||||    
T  41371251 acacatattaagacaaatatataaatgaaggagtgaaaaaaatagttttaagtgctcttgttaagaattg 41371320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 42367932 - 42367859
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| ||||||||||||||| |||| |||||||| ||||||||||| |||| |||||||| ||| |||||    
T  42367932 tattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattagtgaattct 42367859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 33047640 - 33047569
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| |||||||| |||||||||||  ||| ||| ||||||||||||||||||||| ||| |||||||||||    
T  33047640 acacctattaagaaaaatgtataaacaaagaagagagaaaaatggttttaagtgcttttgttaagtattggt 33047569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 39976355 - 39976427
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||  || |||||||||||||||| ||||    ||||||||||||||||| ||||||||||||||||||    
T  39976355 acatattaagaagaacgtataaatgaaggagagagaa----ggttttaagtgctcttgttaagtattggtgcattct 39976427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 4357711 - 4357637
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| |||| ||||||||||||||| ||||| ||| ||||||||| | ||| |||||||||||| |||||    
T  4357711 atattaagaaaaatatataaatgaaggagagagaaagatgattttaagtgtttttgttaagtattggtggattct 4357637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 16493257 - 16493334
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||| || |||| | ||||||||||||||||| | || ||||||||| |||||||||    
T  16493257 acacatattaagataaatgtataaataaaagagagaaaaaaatggttttaagtg-tttttgtaagtatttgtgcattct 16493334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 17237191 - 17237113
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||| ||||||||||||||| |||||||| |||||||||| | ||| |||||||| ||| |||||    
T  17237191 acacctattaagaaaaatatataaatgaaggagagagaaaaatagttttaagtgattttgttaagtattagtggattct 17237113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 27655263 - 27655305
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaat 197  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  27655263 acacatattaagacaaatgtataaatgaaggagagagaaaaat 27655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 31862937 - 31862863
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgca 229  Q
    ||||||||||| |||||||||| |||||||||   |||||||||||||||| | |||||| ||||||||| ||||    
T  31862937 acacatattaaaacaaatgtatcaatgaaggatggagaaaaatggttttaatttctcttgttaagtattgatgca 31862863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 34021185 - 34021107
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||  |||| |||| ||||| |  |||||||||||||||    
T  34021185 acacatattgagacaaatgtataaataaaggagagagaaaaataattttcagtgttcttgttcggtattggtgcattct 34021107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 41436629 - 41436551
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| || ||||||| |||  |||| | ||||||||||||||||||| ||| || |||||||||||||||    
T  41436629 acacatattaagaaaagtgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattct 41436551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 42670342 - 42670420
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||| || |||| |||||||| || |||||||| |||  ||||||||||||||||||    
T  42670342 acacgtattaagaaaaatgtataaataaatgagagagaaaaatagtcttaagtgcacttcttaagtattggtgcattct 42670420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 45290184 - 45290107
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||| |||||||  ||||||| |||||||||||| ||  |||||||||||| |||||    
T  45290184 acacatattaagaaaaatgtataaataaaggagagggaaaaatagttttaagtgctatt-ctaagtattggtgtattct 45290107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 3686161 - 3686081
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatag--aaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||  |||| ||||||||||||||||||  |||||  ||||||||| || ||| ||||||||||||||||||    
T  3686161 acacatattaaggaaaatatataaatgaaggagataggaaaaaaaagttttaagtacttttgttaagtattggtgcattct 3686081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 42051621 - 42051693
Alignment:
Q  161 attaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||| || |||||||||||| ||||||||||||||||||| ||||   || | |||||||||||||||||    
T  42051621 attaagaaaagtgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattct 42051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 27977292 - 27977217
Alignment:
Q  158 catattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||| |||||||||||| ||  |||  |||||||| ||||||||| | ||| ||||||||||||||||||    
T  27977292 catattaagaaaaatgtataaataaattagagtgaaaaatgattttaagtgtttttgttaagtattggtgcattct 27977217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 52676995 - 52677066
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||||||| | |||| || | ||||||||| ||||||||||||||| ||||||||| ||||||    
T  52676995 tattaagaaaaatgtattagtgaatgaaagagaaaaatgattttaagtgctcttgataagtattgatgcatt 52677066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 21241040 - 21240970
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatag-aaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||| |||||||||  ||||||||| || |||||| ||||||||||||||||  ||||||||||    
T  21241040 acatattaagaaaaatgtataggtgaaggagagagaaaaaatagttttaagtgctcttgtcaagtattggt 21240970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 43334982 - 43335060
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||| |  ||||||||||  ||||||||| |||||  || |||| |||||||||    
T  43334982 acacatattaagaaaaatgtataaatgaatgtaatagaaaaataattttaagtgttcttgtcaaatattagtgcattct 43335060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 232
Target Start/End: Original strand, 27790380 - 27790456
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||||||||||| ||||||||||  || |||||| |||||||| |||||||||||||||  || |||| ||||||||    
T  27790380 acacatattaagaaaaatgtataagcgatggagat-gaaaaatgattttaagtgctcttgtcaaatattagtgcattc 27790456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 38160115 - 38160164
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||| |||||||||||| ||||||| |||||||| ||||||||||    
T  38160115 atattaagaaaaatgtataaataaaggagagagaaaaattgttttaagtg 38160164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Original strand, 54729452 - 54729521
Alignment:
Q  164 aagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||||||| |||| |||||||| |||||||||| | ||| |||||||| ||| |||||    
T  54729452 aagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattagtgtattct 54729521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 8065684 - 8065603
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagataga--------aaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||||||||||||||||||| |||        ||||| ||||||||||| |||| ||||||||||||||||||    
T  8065684 tattaagaaaaatgtataaatgaaggagagagaggaaaaaaaaaatagttttaagtgcacttgttaagtattggtgcattct 8065603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9093747 - 9093799
Alignment:
Q  181 gaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||||||| ||||||||||| |||| |||||||| |||||||||    
T  9093747 gaaggagagagaaaaatagttttaagtgcacttgttaagtatttgtgcattct 9093799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 2906811 - 2906736
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcat 230  Q
    ||||||||||| | | ||||||||||||| ||||  ||||||||||||||| || | | | |||||||||||||||    
T  2906811 acacatattaaaaaatatgtataaatgaatgagagtgaaaaatggttttaaatgttttcgttaagtattggtgcat 2906736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 47787806 - 47787881
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcat 230  Q
    |||| |||||||| |||||||||||||||| ||| | |||||| |||||||| || |||| |||||| || |||||    
T  47787806 acacgtattaagaaaaatgtataaatgaagaagagataaaaatagttttaagggcacttgttaagtactgatgcat 47787881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 34790910 - 34790988
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| || |||||||||||| | || ||||||||| |||| |||||| ||   ||||||| |||||||||    
T  34790910 acacatattaagaaaagtgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattct 34790988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 43421441 - 43421392
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggtttta 204  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||| |||||    
T  43421441 acacatattaagataaatgtataaatgaagaagagagaacaatgatttta 43421392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 35909532 - 35909608
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| ||||||||||||||| || | | ||||||  |||||||||   ||| ||||||||||||||||    
T  35909532 acacgtattaagaaaaatgtataaatgaatgaaagataaaaataattttaagtgtatttgttaagtattggtgcatt 35909608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 39258229 - 39258292
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaag 219  Q
    ||||||||||| | |||||||||| |||| |||| || |||||| ||||||||||||||| ||||    
T  39258229 acacatattaaaaaaaatgtataagtgaatgagagag-aaaatgattttaagtgctcttgttaag 39258292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 48400590 - 48400638
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggtttt 203  Q
    ||||| ||||||| ||||||||||||||| |||| ||||||||| ||||    
T  48400590 acacagattaagaaaaatgtataaatgaaagagagagaaaaatgatttt 48400638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 6e-28; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 32348366 - 32348295
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  32348366 acacatattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggt 32348295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 49945080 - 49945002
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  49945080 acacatattaagaaaaatgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattct 49945002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 52432460 - 52432382
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||| ||||||||    
T  52432460 acacacattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgctcttgttaagtattgatgcattct 52432382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 28839483 - 28839416
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||    
T  28839483 atattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgctcttgttaagtattggt 28839416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 5040535 - 5040613
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| ||||||||||||||||||| |||| ||||||||||||||| ||| ||||| ||||||||| ||||||||    
T  5040535 acacatatttagacaaatgtataaatgaatgagagagaaaaatggttttaggtgatcttgttaagtattgatgcattct 5040613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 5442488 - 5442410
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||||||  ||||| |||||||| |||||||||    
T  5442488 acacctattaagacaaatgtataaatgaatgagagagaaaaatggttttaagttatcttgttaagtattagtgcattct 5442410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 45889211 - 45889279
Alignment:
Q  159 atattaagacaaatgtataaatgaa-ggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||    
T  45889211 atattaagacaaatgtataaatgaaaggagagagaaaaatggttttaagtgctcttgttaactattggt 45889279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 8327865 - 8327794
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||| |||||||||||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||||    
T  8327865 acacattttaagacaaatgtataaatgaatgagagagaaaaataattttaagtgctcttgttaagtattggt 8327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 36467155 - 36467233
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||||| |||| |||||||| ||||||||||| |||| |||||||||||| |||||    
T  36467155 acacgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtggattct 36467233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 50267398 - 50267476
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||||| | || |||||||| ||||||||||| |||| ||||||||||||||||||    
T  50267398 acacgtattaagaaaaatgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattct 50267476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 28908237 - 28908157
Alignment:
Q  155 acacatattaagacaaatgtataaatgaag--gagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||||  |||| ||||||||| |||||||| |||||| |||||||| |||||||||    
T  28908237 acacatattaagaaaaatgtataaatgaaggagagagagaaaaatgattttaagtactcttgttaagtattagtgcattct 28908157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 3555519 - 3555586
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||| |  |||||||||||||||||||| ||  |||||||||||    
T  3555519 atattaagacaaatgtataaatgaaggatagggaaaaatggttttaagtgctttttttaagtattggt 3555586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 8773391 - 8773312
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaa-tggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||||||  |||| ||||||| | |||||||||||||||| ||||||||||||||||||    
T  8773391 acacatattaagaaaaacgtataaatgatcgagagagaaaaaatagttttaagtgctcttgttaagtattggtgcattct 8773312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 51749147 - 51749214
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||| |||||||||||||||||||| |||||| || ||||||||| ||||| |||||||||||    
T  51749147 atattaagataaatgtataaatgaaggagagagaaaactgattttaagtgttcttgttaagtattggt 51749214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 42926282 - 42926204
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||||||| || | ||||||||| ||||||||| | ||| ||||||| ||||||||||    
T  42926282 acacatattaagaaaaatgtataaatgaatgaaagagaaaaatgattttaagtgtttttgttaagtatcggtgcattct 42926204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 51848654 - 51848707
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgct 210  Q
    ||||||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  51848654 acatattaagataaatgtataaatgatggagatagaaaaatagttttaagtgct 51848707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 27391495 - 27391419
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| ||||| || |||||||||| ||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||    
T  27391495 acacttattacgaaaaatgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatt 27391419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 32587913 - 32587837
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| ||||||||||||||||| || ||||||||  ||||||||| | ||| ||||||||| ||||||    
T  32587913 acacatattaagaaaaatgtataaatgaaggtgagagaaaaataattttaagtgtttttgttaagtattgatgcatt 32587837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 17724681 - 17724752
Alignment:
Q  162 ttaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| |||||||  ||||||||||| |||||||| |||||||||||||||| ||| ||||| ||||||||    
T  17724681 ttaagaaaaatgtaataatgaaggagagagaaaaattgttttaagtgctcttgttaattattgatgcattct 17724752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 46496164 - 46496088
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||||| |||| ||||| |||| |||| || |||||    
T  46496164 acacatattaagacaaatatataaatgaaggag--agaaaaatggttttgagtgttcttgttaaggattgatgtattct 46496088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 49494123 - 49494194
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| |||||||| ||||||||||||||| |||| |||||||| ||||||||||| |||| ||| |||||||    
T  49494123 acacgtattaagaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcacttgttaaatattggt 49494194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 13500687 - 13500767
Alignment:
Q  155 acacatattaagacaaatgtataaatgaa--ggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||   |||| ||| ||||| ||||||||||| ||| || |||||||||||||||    
T  13500687 acacatattaagaaaaatgtataaatgaatgagagaaagagaaatgattttaagtgcttttgttatgtattggtgcattct 13500767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 17342955 - 17342898
Alignment:
Q  176 taaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||  |||||||||||||||||| | ||| ||||||||||||||||||    
T  17342955 taaatgaaggagagggaaaaatggttttaagtgtttttgttaagtattggtgcattct 17342898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 28277001 - 28277076
Alignment:
Q  161 attaagacaaatgtataaatgaaggagatagaaaaa---tggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||| |||||||||||||||||||| | |||||   | ||||||||||| |||| ||||||||||||||||||    
T  28277001 attaagaaaaatgtataaatgaaggagagaaaaaaaaaatagttttaagtgcacttgttaagtattggtgcattct 28277076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 46536483 - 46536410
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||| |||| |||||||| | ||||||||||||||||||||||||| ||| ||||| || |||||    
T  46536483 tattaagaaaaatttatagatgaaggaaagagaaaaatggttttaagtgctcttgttaaatattgttgtattct 46536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 3718810 - 3718885
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||  ||||||| |||||||    
T  3718810 acacttattaagaaaaatgtattaatgaag-agagagaaaaatagttttaagtgctcttgtcaagtatttgtgcatt 3718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 26040811 - 26040739
Alignment:
Q  161 attaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||| || |||||||||||| ||| ||||||||||||||| |||| | |||  |||||||||||||||||    
T  26040811 attaagaaaagtgtataaatgaaagagttagaaaaatggttttgagtgtttttgtcaagtattggtgcattct 26040739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 46880563 - 46880491
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| |||| || ||||||  ||||||| ||||    
T  46880563 acacatattaagaaaattgtataaatgaaggagagagaaaaatgattttgagagctcttattaagtatcggtg 46880491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 52830374 - 52830450
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||| | |||||||||||||||||||| ||||||||  |||| |||||  ||| ||||||||||||||||    
T  52830374 acacgtattaaaaaaaatgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcatt 52830450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 10370148 - 10370223
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatag-aaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| |||||||||||| ||||||| || |||||| |||||||||||| ||| ||||||||  ||||||||    
T  10370148 atattaagaaaaatgtataaataaaggagagagaaaaaatagttttaagtgcttttgttaagtattaatgcattct 10370223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 26756109 - 26756046
Alignment:
Q  170 aatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||| |||| || ||||| ||||||||||| |||| ||||||||| ||||||||    
T  26756109 aatgtataaatgaatgagagaggaaaatagttttaagtgcacttgttaagtattgatgcattct 26756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 40019901 - 40019830
Alignment:
Q  161 attaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||||| |||||||||| |||| |||| |||||||| ||||||||||||||||  ||||||| ||| ||||    
T  40019901 attaagaaaaatgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtattc 40019830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 27209927 - 27210005
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| || |||||||||||| |||| ||||||||| |||| ||||   |||  |||||||||||||||||    
T  27209927 acacatattaagaaaagtgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattct 27210005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 27698952 - 27698874
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||  |||||||||| | || ||| |||| |||||||||    
T  27698952 acacgtattaagaaaaatgtataaatgaaggaaataaaaaaataattttaagtgcacatgttaattattagtgcattct 27698874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 48242559 - 48242625
Alignment:
Q  164 aagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcat 230  Q
    |||| |||||||||||||||||||  | |||||| ||||||||||| |||| ||||||||| |||||    
T  48242559 aagaaaaatgtataaatgaaggagggataaaaatagttttaagtgcacttgataagtattgatgcat 48242625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 11324381 - 11324332
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggtttta 204  Q
    ||||||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  11324381 acacatattaagaaaaatgtataaatgaatgagagagaataatggtttta 11324332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 204
Target Start/End: Complemental strand, 11482402 - 11482353
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggtttta 204  Q
    ||||||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  11482402 acacatattaagaaaaatgtataaatgaatgagagagaataatggtttta 11482353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 37525181 - 37525111
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    |||||||| |||||||||||||||||||  |||||||| ||||||| ||| |||| ||||||||  |||||||    
T  37525181 tattaagaaaaatgtataaatgaaggag--agaaaaatagttttaaatgcacttgttaagtattaatgcattc 37525111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 4659579 - 4659511
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    |||| |||||||| |||||||| | |||||| || |||||||| ||||||||||||||||  |||||||    
T  4659579 acacttattaagaaaaatgtattagtgaaggggagagaaaaatagttttaagtgctcttgtgaagtatt 4659511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 19532893 - 19532957
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||||| | |||||||| ||||||||||  |||| ||||||||||| ||||||    
T  19532893 aaatatataaatgaaggatagagaaaaatagttttaagtgtacttgttaagtattggttcattct 19532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 28706583 - 28706659
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||| | |||||||||||||||  ||| |||||||||||||| |||||  |||  |||||||| ||||||    
T  28706583 acacatattaaaaaaaatgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatt 28706659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 16451737 - 16451686
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||||||| ||||    
T  16451737 acatattaagaaaaatgtataaaggaaagagagagaaaaatggttttgagtg 16451686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 16460890 - 16460839
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||||||| ||||    
T  16460890 acatattaagaaaaatgtataaaggaaagagagagaaaaatggttttgagtg 16460839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 36784461 - 36784386
Alignment:
Q  156 cacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||||||  |||| ||||||||||| |||  |||| ||| ||||| ||||||||| |||||||| |||||||    
T  36784461 cacatattaaggtaaatatataaatgaagtagaatgaaatatgattttaggtgctcttgttaagtatttgtgcatt 36784386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 2571510 - 2571435
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| ||| |||||||||||| |||| || ||||| ||||| |||| ||||| ||||||||||||||||    
T  2571510 acacatattaagaaaaaatgtataaatgaaagagagag-aaaatagttttgagtg-tcttgttaagtattggtgcatt 2571435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 16040220 - 16040147
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| |||| ||| | | ||||||| |||||||||||||||||||   ||| ||||||||||| ||||||    
T  16040220 tattaagaaaaatatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattct 16040147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 43895994 - 43895923
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    ||||||||||||| ||||||||| ||||| |||| || ||||| |||||| ||| | ||| ||||||||||||    
T  43895994 acacatattaagaaaaatgtatagatgaaagagagag-aaaatagttttatgtgtttttgttaagtattggtg 43895923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 229970 - 229893
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  229970 acacgtattaagacaaatgtataaatgaaggagatagaaaaat-gttttaagtgctcttgttaagtattggtgcattct 229893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 5392197 - 5392119
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||||||||||    
T  5392197 acacctattaagacaaatgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgcattct 5392119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 44790381 - 44790459
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||    
T  44790381 acacgtattaagacaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattct 44790459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 5962432 - 5962510
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||  ||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||||    
T  5962432 acacatattaaggaaaatgtataaatgaaggagatagaaaaaacgttttaagtgcttttgttaagtattggtgcattct 5962510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32241383 - 32241461
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||| ||||||||| ||||||||    
T  32241383 acacatattaagacaaatgtataaatgaaggagagataaaaatgattttaagtgttcttgttaagtattgatgcattct 32241461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 28802915 - 28802846
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  28802915 acacgtattaagacaaatgtataaatgaaagagagagaaaaatggttttaagtgctcttgttaagtattg 28802846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 33190868 - 33190946
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||| ||||||||  ||||||||    
T  33190868 acacatattaagacaaatgtataaatgaagaagagagaaaaatgattttaagtgttcttgttaagtattaatgcattct 33190946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 139170 - 139094
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| ||||||||||||||| |||| | ||||||| |||||| | |||||| ||||||||||||||||    
T  139170 acacatattaagaaaaatgtataaatgaatgagagataaaaatgattttaaattctcttgttaagtattggtgcatt 139094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 29730869 - 29730933
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||||    
T  29730869 aaatatataaatgaaggagagagaaaagtggttttaagtgttcttgttaagtattggtgcattct 29730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 42558542 - 42558611
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||||||| || ||||| |||||||||||    
T  42558542 acacatattaagacaaatgtataaatgaaggag--agataaatggttttaattgttcttgttaagtattggt 42558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 45425617 - 45425557
Alignment:
Q  171 atgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||||||||| ||||||    
T  45425617 atgtataaatgaaggagagagacaaatggttttaagtgctcttgttaagtattgatgcatt 45425557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 38252396 - 38252475
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatag-aaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||||| || |||||| ||||||||||| |||| |||||||| |||||||||    
T  38252396 acacgtattaagaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcacttgttaagtattagtgcattct 38252475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 33925060 - 33925118
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctctt 213  Q
    |||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  33925060 acacatattaagacaaatgtataaatgaaggagagagaatagtggttttaagtgatctt 33925118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 42412342 - 42412420
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||| |||| |||| |||||||| ||||||||||||||||  |  ||||||||||||||    
T  42412342 acacatattaagaaaaatgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattct 42412420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 37219720 - 37219773
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  37219720 acacatattaagacaaatgtataaatgaaggagagagaaatatgattttaagtg 37219773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 12653835 - 12653759
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| |||||||||||||||| ||| |||||||| |||||||||||  ||| ||| ||||||||||||    
T  12653835 acacgtattaagaaaaatgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtgcatt 12653759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 29615946 - 29615874
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    |||| |||||||| |||||||||||||||||||| ||||||||  |||||| ||| |||| ||||||||||||    
T  29615946 acacgtattaagaaaaatgtataaatgaaggagagagaaaaataattttaaatgcacttgttaagtattggtg 29615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 21587419 - 21587347
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||  || |||||||||||||||| ||||    ||||||||||||||||| ||||||||||||||||||    
T  21587419 acatattaagaagaacgtataaatgaaggagagagaa----ggttttaagtgctcttgttaagtattggtgcattct 21587347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32967236 - 32967314
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||  |||||||||||||||| ||| |||||||| ||||||||||| |||  ||||||||||| ||||||    
T  32967236 acacgtattaagtaaaatgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtccattct 32967314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 39171677 - 39171615
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| ||||||||||||||| |||||||||||||||||| || ||| ||||||||| ||||||    
T  39171677 aaatatataaatgaaggagagagaaaaatggttttaagtacttttgttaagtattgatgcatt 39171615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 7258326 - 7258402
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||| | |||| ||| ||||||||| | ||||||||||||||||| |||||||  |||||||||||||||    
T  7258326 acacttattaaaaaaaatatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcatt 7258402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 9014837 - 9014773
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||||||| ||| ||||||||| ||||||||||| ||| ||||||||| ||||||||    
T  9014837 aaatatataaatgaagaagagagaaaaatgattttaagtgcttttgttaagtattgatgcattct 9014773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 13084921 - 13084985
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| ||||||||||||| | |||||| |||||||||| ||||| ||| ||||||||||||||    
T  13084921 aaatgtgtaaatgaaggagagacaaaaatagttttaagtgttcttgttaattattggtgcattct 13084985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 31410567 - 31410643
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| ||||  |||||||||||||| |||||||  |||||||||| | ||| ||| ||||||||||||    
T  31410567 acacatattaagaaaaattaataaatgaaggagagagaaaaacagttttaagtgtttttgttaaatattggtgcatt 31410643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2195616 - 2195538
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||| |||| |||| |||||||| ||||| |||| ||||| ||||||||||||||||||    
T  2195616 acacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tcttgttaagtattggtgcattct 2195538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 22324919 - 22324990
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||||||  |||| ||| |||| |||||||    
T  22324919 tattaagaaaaatgtataaatgaaggagagagaaaaataattttaagtgtacttgttaaatattagtgcatt 22324990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 2349494 - 2349420
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatag-aaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| | |||||||||||||||||||| || |||||| |||||||||||  ||| |||||||| |||||||||    
T  2349494 tattaaaaaaaatgtataaatgaaggagagagaaaaaatagttttaagtgcatttgttaagtatttgtgcattct 2349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 3384684 - 3384611
Alignment:
Q  155 acacatattaagacaaatgtataaatgaag--gagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||||| ||||||||||||||||  |||| ||||||||||| |||| | |||||| || ||||||||    
T  3384684 acacatattaagaaaaatgtataaatgaagaagagagagaaaaatggtattaaatactcttgttatgtattggt 3384611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 31132864 - 31132807
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||| | |||||| | ||||||||| ||||||||||||||| |||||||||||    
T  31132864 aaatgtatagacgaaggatagagaaaaatgattttaagtgctcttgttaagtattggt 31132807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 4274265 - 4274313
Alignment:
Q  162 ttaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgct 210  Q
    ||||||||||||||||||||||| ||| ||||||||  |||||||||||    
T  4274265 ttaagacaaatgtataaatgaagaagagagaaaaataattttaagtgct 4274313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 12957954 - 12957998
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctctt 213  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||    
T  12957954 aaatgtataaatgttggaaatagaaaaatggttttaagtgctctt 12957998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 15559094 - 15559161
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    |||||||| |||||||| | ||||||||| | ||||||| ||||||||| |||||  |||||||||||    
T  15559094 tattaagaaaaatgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtg 15559161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 4480433 - 4480506
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| ||||||||||||||| |||| ||||||||  |||||| | || ||| || |||||||||||||||    
T  4480433 atattaagaaaaatgtataaatgaaagagagagaaaaat-attttaaatacttttgttatgtattggtgcattct 4480506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 27973645 - 27973714
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    |||| |||||||| |||||||| | |||||||   ||||||||||||||||||| |||||  ||||||||    
T  27973645 acacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattg 27973714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 28030914 - 28030983
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    |||| |||||||| |||||||| | |||||||   ||||||||||||||||||| |||||  ||||||||    
T  28030914 acacttattaagaaaaatgtattagtgaaggatggagaaaaatggttttaagtgttcttgtcaagtattg 28030983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 7042902 - 7042822
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagat-agaaaaatggttttaagtgctcttggt-aagtattggtgcattct 233  Q
    |||||||| |||| |||||||||||||||  | |  |||||||||  |||||||||||||| | |||||||||||||||||    
T  7042902 acacatatcaagaaaaatgtataaatgaaaaaaaagagaaaaatgaatttaagtgctcttgtttaagtattggtgcattct 7042822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 40077712 - 40077787
Alignment:
Q  158 catattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggt-aagtattggtgcattct 233  Q
    |||||||||| || |||||||||||| |||| | ||||||| |||| |||| |||| || |||||||||||||||||    
T  40077712 catattaagaaaagtgtataaatgaaagagagaaaaaaatgattttgagtg-tctttgtcaagtattggtgcattct 40077787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 40316551 - 40316619
Alignment:
Q  158 catattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| ||||| ||||||| ||||||| |||| | |||||||||||||||  |||||| ||| |||||||    
T  40316551 catactaagaaaaatgtacaaatgaatgagagaaaaaaatggttttaagatctcttgttaaatattggt 40316619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 28527112 - 28527034
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||    
T  28527112 acacatattaagaaaaatgtataaatgaaggagaaaaaaaaatggttttaagtgctcttgttaagtattcgtgcattct 28527034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 28572397 - 28572278
Alignment:
Q  113 tactccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctct 212  Q
    ||||||||||||||||||||||| ||||||            |||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||    
T  28572397 tactccctccgtcccgaattagctgagccattttttcatttcacacatattaagacaaatgtataaataaaggagagagaaaa-tgattttaagtgctct 28572299  T
Q  213 tggtaagtattggtgcattct 233  Q
    || ||||||||||||||||||    
T  28572298 tgttaagtattggtgcattct 28572278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 28301578 - 28301511
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||    
T  28301578 atattaagacaaatgtataaatgaaggaaagagaaaaatggttttaagtgctcttgttaagtattggt 28301511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 2882119 - 2882055
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  2882119 aaatgtataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgcattct 2882055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 565237 - 565159
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| |||||| ||||||||| |||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||||    
T  565237 acacattttaagaaaaatgtatatatgaaggagaaagaaaaatgattttaagtgttcttgttaagtattggtgcattct 565159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 5211879 - 5211993
Alignment:
Q  117 ccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggt 216  Q
    ||||||||||||||||||||||||||            ||||||||||| |||||||||||||||||| |||  ||||||| |||||||||||||||| |    
T  5211879 ccctccgtcccgaattagccgagccattttttcatttcacacatattaaaacaaatgtataaatgaagaagagggaaaaatagttttaagtgctcttgtt 5211978  T
Q  217 aagtattggtgcatt 231  Q
    ||||||| |||||||    
T  5211979 aagtatttgtgcatt 5211993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 15859304 - 15859382
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||||||||| || ||| |||||||||| |||||||    
T  15859304 acacatattaagacaaatatataaatgaaggagagagaaaaatagttttaagtacttttgttaagtattggggcattct 15859382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 33755405 - 33755334
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    |||| ||||||||||||||||||||||||||||| ||||||||| ||||||||| | ||| |||||||||||    
T  33755405 acacgtattaagacaaatgtataaatgaaggagagagaaaaatgattttaagtgttattgttaagtattggt 33755334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 36155662 - 36155583
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||||||||||||| | ||||||| ||||||||||||||| |||||||||||| |||||    
T  36155662 acacatattaagataaaatgtataaatgaaggagagaaaaaaatgattttaagtgctcttgttaagtattggtgtattct 36155583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 28108334 - 28108412
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||  ||||||||||||||| |||||||| ||||||||||| |||| ||||||||||||||||||    
T  28108334 acacgtattaagaaaaaattataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattct 28108412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 28925807 - 28925885
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||| ||||||| |||||||| ||||||||||| |||| ||||||||| ||||||||    
T  28925807 acacgtattaagaaaaatgtataaataaaggagagagaaaaatagttttaagtgcacttgttaagtattgatgcattct 28925885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 30757529 - 30757595
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| ||||||||    
T  30757529 acatattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtatt 30757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 3100543 - 3100470
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||| |||||| ||||||||||||||| ||||||||| ||||||||| ||||| ||||||||| ||||||||    
T  3100543 tattaaaacaaatatataaatgaaggagagagaaaaatgattttaagtgatcttgttaagtattgctgcattct 3100470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 44534443 - 44534520
Alignment:
Q  156 cacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||||||||||||||||||| | | ||||||| |||||| || ||||| ||||||||||| ||||||    
T  44534443 cacatattaagacaaatgtataaatgaaggacagaaaaaaatgattttaaatgttcttgttaagtattggtacattct 44534520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 37247847 - 37247914
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||||||||||||||||||| |||||| | | |||||| |||||||||||||||| |||||||||||    
T  37247847 atattaagacaaatgtataaaagaaggaaagaaaaaaatagttttaagtgctcttgttaagtattggt 37247914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 33602185 - 33602263
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||| || |||  | ||||||||||||||||||||||| || ||||| |||||||||    
T  33602185 acacatattaagaaaaatgtataaataaaagaggaaaaaaaatggttttaagtgctcttgttatgtattagtgcattct 33602263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 36103265 - 36103338
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||| ||||||| |||||||||||| ||||||||| ||||||||| ||||| ||||||| | ||||||||    
T  36103265 tattaagaaaaatgtacaaatgaaggagagagaaaaatgattttaagtgttcttgttaagtatcgatgcattct 36103338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 40965162 - 40965093
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattg 224  Q
    |||| |||||||| |||||||||||||||||||| |||||||| |||||||||||  ||| |||||||||    
T  40965162 acacgtattaagaaaaatgtataaatgaaggagagagaaaaatagttttaagtgcatttgttaagtattg 40965093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 24775781 - 24775845
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||| ||||||||  |||||||||| |||| |||||||||||| |||||    
T  24775781 aaatgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgtattct 24775845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 43077685 - 43077761
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||||||||||||||||||| |||| |||||||| ||||||| ||  |||| ||| ||||||||||||    
T  43077685 acacgtattaagacaaatgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcatt 43077761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 23685104 - 23685029
Alignment:
Q  158 catattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||| |||||||||||| ||||||| |||||| | |||||||||| | ||| |||||||| |||||||||    
T  23685104 catattaagaaaaatgtataaataaaggagagagaaaattagttttaagtgtttttgttaagtattagtgcattct 23685029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 36396428 - 36396495
Alignment:
Q  166 gacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||| ||| | | ||||||||||||||||||||||||| | |||||| |||||||||    
T  36396428 gacaaatgtataaataaagtatagagaaaaatggttttaagtgctcttgatgagtattagtgcattct 36396495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 3123794 - 3123716
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||| ||||| ||| ||||||||  ||||||||||| |   ||||||||||||||||||    
T  3123794 acacatattaagaaaaatgtataactgaagtagagagaaaaataattttaagtgctttcattaagtattggtgcattct 3123716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 18181172 - 18181250
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||| ||||||| || ||||||| |||  |||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  18181172 acacagattaagaaaagtgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattct 18181250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 39807360 - 39807283
Alignment:
Q  156 cacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||||||| |||||||||||| || |||| |||||||||||||| |||||  |||  |||||||||||||||||    
T  39807360 cacagattaagaaaaatgtataaatcaaagagaaagaaaaatggttttgagtgcctttgtgaagtattggtgcattct 39807283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 2756822 - 2756746
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| |||||||| ||||||| ||| ||||||||  |||||||||||||||  ||||||| |||||||    
T  2756822 acacttattaagaaaaatgtattaatgaagaagagagaaaaattattttaagtgctcttgtcaagtattagtgcatt 2756746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 45464174 - 45464250
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| |||||||||| |||| |||| | ||||||| |||||| |||||||| ||||| || |||||||    
T  45464174 acacatattaagaaaaatgtataagtgaatgagagaaaaaaatgattttaaatgctcttgttaagtgtttgtgcatt 45464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 9472570 - 9472523
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttt 202  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  9472570 acacatattaagaaaaatgtataaatgaaagagatagaacaatggttt 9472523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 10818770 - 10818691
Alignment:
Q  155 acacatattaagacaaatgtataaat-gaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||| |||| |||||||||||  |||||||| ||||||||||||||| |  |||||| ||||||||||||||||||    
T  10818770 acacgtatcaagaaaaatgtataaaacgaaggagagagaaaaatggttttatgcactcttgttaagtattggtgcattct 10818691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 13375147 - 13375226
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaa-gtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||||| ||| ||||  ||||||||||  ||| ||| |||||||||||||||    
T  13375147 acacgtattaagaaaaatgtataaatgaaggagagagataaataattttaagtgcagttgttaaggtattggtgcattct 13375226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 8550601 - 8550679
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||| ||| ||| |||||||||| |||| |||| |||||| |||||||||||| |||||  ||||||| |||||||||    
T  8550601 acacacatttagaaaaatgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattct 8550679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 9725026 - 9724948
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| || |||||||||||| |||| ||| ||||| |||| |||||| ||   |||||||||||||||||    
T  9725026 acacatattaagaaaagtgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattct 9724948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 31545981 - 31546051
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgca 229  Q
    ||||||| | ||||||||||||||||||||  ||||| |||||||||||| ||||| ||| ||||| ||||    
T  31545981 atattaaaaaaaatgtataaatgaaggagaaggaaaagtggttttaagtgatcttgttaaatattgatgca 31546051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 38280155 - 38280233
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||||||||||| |||  ||| |||||||||||||| |||||  ||  ||| ||||||||||||||    
T  38280155 acacatattaagaaaaatgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattct 38280233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 10394243 - 10394314
Alignment:
Q  156 cacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtg 227  Q
    |||| ||||||| ||||||||||| |||||||| ||||||||  |||||| || | ||| ||||||||||||    
T  10394243 cacacattaagaaaaatgtataaaagaaggagagagaaaaataattttaaatgtttttgttaagtattggtg 10394314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 435053 - 435115
Alignment:
Q  171 atgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||| | |||||| ||||||||||| |||| ||| |||| |||||||||    
T  435053 atgtataaatgaaagagagacaaaaatagttttaagtgcacttgttaaatattagtgcattct 435115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2048440 - 2048362
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||| | |||||||||| |||| |||| |||||||||||| | |||||||||   || ||||||||||||||    
T  2048440 acacttattaaaaaaaatgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattct 2048362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 32556318 - 32556243
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||||||||||| || ||||||| |||| ||||  |||||||||||||||||   ||||  ||||||||||||||||    
T  32556318 acacatattaagaaaagtgtataagtgaaagaga--gaaaaatggttttaagtatccttgtcaagtattggtgcattc 32556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 232
Target Start/End: Complemental strand, 44737014 - 44736939
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattc 232  Q
    ||||||||||||| |||||||||| | || |||| | ||||||| |||||||||||| |   ||||||||||||||||    
T  44737014 acacatattaagaaaaatgtataagttaatgagagataaaaatgattttaagtgctcat--caagtattggtgcattc 44736939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 18460636 - 18460583
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||| ||||||| || |||||||||||| |||||||||||||| |||| ||||    
T  18460636 acacagattaagaaaagtgtataaatgaaagagatagaaaaatgattttgagtg 18460583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 7649949 - 7650012
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||||||||  | |||||  ||||||||||||||| |||||| || ||||||||    
T  7649949 aaatgtataaatgaaggagagcgcaaaata-ttttaagtgctcttgttaagtactgatgcattct 7650012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 98973 - 98897
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||||||| ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  98973 acacatattaagaaaaatgtataaatgaatgagagagaaaaatgattttaagtgctcttgataagtattggtgcatt 98897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 8e-24; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 5245558 - 5245482
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  5245558 acatattaagacaaatgtatacatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgtattct 5245482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 26134662 - 26134730
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  26134662 acacatattaagacaaatgtataaatgaaggagagagaaaaattgttttaagtgctcttgttaagtatt 26134730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 43639475 - 43639551
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||    
T  43639475 acacatattaagacaaatatataaatgaaggagagagaaaaatggttttaagtgctgttgttaagtattgatgcatt 43639551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 39364953 - 39365071
Alignment:
Q  112 atactccctccgtcccgaattagccgagccannnnnnnnnnnnacacatattaagacaaatgtataaatgaaggagatagaaaaa-tggttttaagtgct 210  Q
    |||||||||||||||||||||||| ||||||            ||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||    
T  39364953 atactccctccgtcccgaattagctgagccacttgctcatttcacacatattaagaaaaatgtataaataaaggagagagaaaaagtggttttaagtgct 39365052  T
Q  211 cttggtaagtattggtgca 229  Q
    |||| ||||||||||||||    
T  39365053 cttgttaagtattggtgca 39365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 54122183 - 54122261
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| || | ||| ||||||||||||||||||    
T  54122183 acacatattaagacaaatgtataaatgaaggagagagaaaaatagttttaaatgtttttgttaagtattggtgcattct 54122261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 231
Target Start/End: Original strand, 21296462 - 21296538
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||| |||||||||||||||||||||||||| || |||||| |||||| |||||||| ||||||||||||||||    
T  21296462 acacatactaagacaaatgtataaatgaaggagagaggaaaatgattttaaatgctcttgttaagtattggtgcatt 21296538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2868722 - 2868644
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||| || ||| || |||||| ||||||||    
T  2868722 acacatattaagaaaaatgtataaatgaaggagagagaaaaatggttttaagttcttttgttatgtattgctgcattct 2868644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 9017949 - 9017871
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| | ||||||||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||||||||    
T  9017949 acacatattaaaaaaaatgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattct 9017871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 11251090 - 11251164
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| ||||||||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||    
T  11251090 atattaagaaaaatgtataaatgaatgagagaaaaaaatgattttaagtgctcttgttaagtattggtgcattct 11251164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 36097616 - 36097692
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||  || |||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||||||||    
T  36097616 acatattaagaagaacgtataaatgaaggagagagaaaaatggttttaagtactcttgttaagtatcggtgcattct 36097692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32023059 - 32023138
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaat-ggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||  |||||||||||||||||||||||||||||  ||||||||| || ||| ||||||||||||||||||    
T  32023059 acacatattaaggaaaatgtataaatgaaggagatagaaaaataagttttaagtacttttgttaagtattggtgcattct 32023138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 32827263 - 32827341
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||||||||||| | |||||| ||||||||||| |||| || |||||||||||||||    
T  32827263 acacgtattaagaaaaatgtataaatgaaggagagaaaaaaatagttttaagtgcacttgttacgtattggtgcattct 32827341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 33994805 - 33994727
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| ||| |||| |||||||||||||||||||| ||||||||  |||||||||| |||| ||||||||||||||||||    
T  33994805 acacgtatcaagaaaaatgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgcattct 33994727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 39866512 - 39866590
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||||||||||| | |||||||| |||||||||| | ||| |||||||||||| |||||    
T  39866512 acacatattaagaaaaatgtataaatgaaggaaagagaaaaatagttttaagtgattttgttaagtattggtgtattct 39866590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 54783111 - 54783035
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| ||||||||||||||| |||| |||||||| ||||||||||| |||  ||||||||||||||||    
T  54783111 acacgtattaagaaaaatgtataaatgaatgagagagaaaaatagttttaagtgcacttcttaagtattggtgcatt 54783035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 226
Target Start/End: Original strand, 1772073 - 1772136
Alignment:
Q  163 taagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggt 226  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||    
T  1772073 taagaaaaatgtataaataaaggagagagaaaaatggttttaagtgttcttgttaagtattggt 1772136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 14756073 - 14756151
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| |||||||||| | ||||||| ||||||||  ||||||||||||||| |||||| |||| ||||||    
T  14756073 acacatattaagaaaaatgtataattaaaggagagagaaaaataattttaagtgctcttgttaagtactggtacattct 14756151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 52325325 - 52325247
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| |||||||||||| ||||||||||||||| |||||| |||| | ||| || |||||||||||||||    
T  52325325 acacgtattaagaaaaatgtataaataaaggagatagaaaaagggtttttagtgttattgttatgtattggtgcattct 52325247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 26143049 - 26142969
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttt--taagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||  || || |||||  ||||||||||||||||||    
T  26143049 acacatattaagacaaatgtataaataaaggagagagaaaattggttttataggttctctttttaagtattggtgcattct 26142969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 8706280 - 8706216
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  8706280 aaatgtataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattct 8706216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 9058167 - 9058103
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||||||| ||| ||| ||||| ||||||||||||||| ||||||||| ||||||||    
T  9058167 aaatgtataaatgaagaagagagagaaatgattttaagtgctcttgttaagtattgatgcattct 9058103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 10855142 - 10855066
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||||| |||||||||||||||||||| |||||||| |||||||||| | ||  || |||||||||||||    
T  10855142 acacgtattaagataaatgtataaatgaaggagagagaaaaatagttttaagtgtttttattatgtattggtgcatt 10855066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 214
Target Start/End: Complemental strand, 15280752 - 15280693
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttg 214  Q
    ||||||||||||| |||||||||||||||||||| | ||||||| |||||||||| ||||    
T  15280752 acacatattaagataaatgtataaatgaaggagagataaaaatgattttaagtgcacttg 15280693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 51636860 - 51636931
Alignment:
Q  160 tattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||||||| |||||| ||| ||||||||| ||||||||||||||||||  |||||  |||||||||||||||    
T  51636860 tattaagaaaaatgtttaagtgaaggagagagaaaaatggttttaagttgtcttgccaagtattggtgcatt 51636931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 12745110 - 12745045
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagta 221  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||||||| ||||||    
T  12745110 acacatattaagaaaaatgt-taaatgaaggagagataaaaatgcttttaagtgctcttgttaagta 12745045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 17776953 - 17777031
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||| | ||||||||||||||| |||| ||||||||||||||| ||||| ||  |||||||| |||||||||    
T  17776953 acacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattct 17777031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 19078254 - 19078332
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||| | ||||||||||||||| |||| ||||||||||||||| ||||| ||  |||||||| |||||||||    
T  19078254 acacgtattaaaaaaaatgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattct 19078332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 41031723 - 41031647
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    |||| |||||| | |||||||| || |||| ||| |||||||| ||||||||||| |||| ||||||||||||||||    
T  41031723 acacgtattaaaaaaaatgtatgaaagaagaagaaagaaaaatagttttaagtgcacttgttaagtattggtgcatt 41031647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 53876399 - 53876471
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcatt 231  Q
    ||||||||| |||||||||||||||||||  | ||||||| ||||||||||| ||| ||| |||| |||||||    
T  53876399 atattaagaaaaatgtataaatgaaggagtgaaaaaaatgattttaagtgcttttgttaaatatttgtgcatt 53876471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 54845477 - 54845553
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||| | |||||||||||||||||| |||||||| |||||||||| | ||| |||| || | ||||||||    
T  54845477 acatattaagaaatatgtataaatgaaggagagagaaaaatagttttaagtgtttttgttaaggatcgatgcattct 54845553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 233
Target Start/End: Original strand, 55415412 - 55415476
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||| || |||| |||||||||||||||| || | ||| ||||||||||||||||||    
T  55415412 aaatgtataaataaatgagagagaaaaatggttttaactgtttttgttaagtattggtgcattct 55415476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 54458271 - 54458346
Alignment:
Q  159 atattaagacaaat-gtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||| |||| |||||||| ||| ||||||||||||| ||||||||| | ||| ||||||| ||||||||||    
T  54458271 atattaagaaaaattgtataaataaagaagatagaaaaatgattttaagtgattttgttaagtatgggtgcattct 54458346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 17274829 - 17274779
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaa 205  Q
    ||||||||||||| |||||||||||||||||||  |||||||| |||||||    
T  17274829 acacatattaagaaaaatgtataaatgaaggagggagaaaaatagttttaa 17274779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 49408655 - 49408589
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    |||||||||||  ||| ||||||||||||| | |||||||| |||||||||| ||||| ||||||||    
T  49408655 acatattaagaataatttataaatgaaggaaagagaaaaatagttttaagtgttcttgttaagtatt 49408589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 49006344 - 49006292
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  49006344 acacatattaaga-aaatgtataaatgaaggagatatgaaaatagttttaagtg 49006292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 45241145 - 45241089
Alignment:
Q  169 aaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattgg 225  Q
    |||||||| | ||||| ||| |||||||||||||||||||||||||  |||||||||    
T  45241145 aaatgtattagtgaagaagagagaaaaatggttttaagtgctcttgtcaagtattgg 45241089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 9218293 - 9218215
Alignment:
Q  155 acacatattaagacaaa-tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||| ||| ||||||| |||| |||| |||||||| ||||| |||| ||| | ||||||||||||||||||    
T  9218293 acacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtg-tctcgttaagtattggtgcattct 9218215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 22202326 - 22202368
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaat 197  Q
    ||||||||||||| |||||||||||||||||| | ||||||||    
T  22202326 acacatattaagataaatgtataaatgaaggaaagagaaaaat 22202368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 233
Target Start/End: Original strand, 53754040 - 53754101
Alignment:
Q  172 tgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    ||||||||||||  ||| ||||||||| |||| ||||   ||||||||||||||||||||||    
T  53754040 tgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattct 53754101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 223
Target Start/End: Original strand, 9511 - 9579
Alignment:
Q  156 cacatattaagacaaat-gtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtatt 223  Q
    |||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9511 cacatattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtatt 9579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 200
Target Start/End: Complemental strand, 26752 - 26709
Alignment:
Q  157 acatattaagacaaatgtataaatgaaggagatagaaaaatggt 200  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  26752 acatattaagacaaatgtataaatgaaggagagagaaaaatggt 26709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 14604 - 14526
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||| |||||||| ||||||||||||||||| || | |||||| ||||||| ||| |||| ||||||||| ||||||||    
T  14604 acacgtattaagaaaaatgtataaatgaaggggagataaaaatagttttaattgcacttgctaagtattgatgcattct 14526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 230399 - 230326
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtgctcttggtaagtattggtgcattct 233  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||  ||||| |||| || ||| ||||||    
T  230399 atattaagacaa-tgtataaatgaagaagagagaaaaatggttttaagtattcttgttaagcatgggtacattct 230326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 9014 - 8961
Alignment:
Q  155 acacatattaagacaaatgtataaatgaaggagatagaaaaatggttttaagtg 208  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||  |||||||||    
T  9014 acacatattaagaaaaatgtataaatgaagaagagagaaaaataattttaagtg 8961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 394917 - 394877
Alignment:
Q  159 atattaagacaaatgtataaatgaaggagatagaaaaatgg 199  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  394917 atattaagataaatgtataaataaaggagttagaaaaatgg 394877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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