View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250-Insertion-4 (Length: 269)
Name: NF1250-Insertion-4
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250-Insertion-4 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 8 - 269
Target Start/End: Original strand, 36170976 - 36171237
Alignment:
| Q |
8 |
caaggacgtttcaagttggtcctgcattgagggataataaagtgtttgaaaaaataaatccagatgttacatattaacatgcttaatgaggagggtaagc |
107 |
Q |
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| T |
36170976 |
caaggaagtttcaagttggtcctgcattgagggataataaagtgtttgaaaaaataaatccagatgttacatattaacatgcttaatgaggagggtaagc |
36171075 |
T |
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| Q |
108 |
accttaatttccaagatgcacgcaaaaaatttgtgtcggactcaacatcctgcattattaatttatataatgagtgaagtacggcgctgtttctttgaag |
207 |
Q |
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| T |
36171076 |
accttaatttccaagatgcacgcaaaaaatttgtgtcggactcaacttcctgcattattaatttatataatgagtgaagtacggcgctgtttctttgaag |
36171175 |
T |
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| Q |
208 |
caaaaaagtgtagttcaagctgttaatttacagagaagatctaccttttcgatctttagtag |
269 |
Q |
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| T |
36171176 |
caaaaaagtgtagttcaagctgttaatttacagataagatctaccttttcgatctttagtag |
36171237 |
T |
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