View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250-Insertion-6 (Length: 275)
Name: NF1250-Insertion-6
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250-Insertion-6 |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 46483777 - 46484042
Alignment:
| Q |
8 |
gaaactataaaatattttcataattaaattagatgtgattgaaatttatatgaccattcaaccaatttaagattatcagaatctcattctcttgataatc |
107 |
Q |
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| T |
46483777 |
gaaactataaaatattttcataattaaattagatgtgattgaaatttatatgatcattcaaccaatttaagattatcagaatctcattctcttgataatc |
46483876 |
T |
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| Q |
108 |
gaagaattaagattaagaaagtttataatgaatcatagaattggaagaatagctttgatatttatggcgttgatgaatatctttgttcaaattgtacaac |
207 |
Q |
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| T |
46483877 |
ggagaattaagattaagaaagtttataatgaatcatagaattggaagaatagctttgatatttatggcgttgatgaatatctttgttcaaattgtacaac |
46483976 |
T |
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| Q |
208 |
tcgttctcaattcggatttagaaaagcatgaggttgttaagataaaccatctttagtcgcaccgcc |
273 |
Q |
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| T |
46483977 |
tcgttctcaattcggatttagaaaagcatggggttgtcaagataaaccatctttagtcgtaccgcc |
46484042 |
T |
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