View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12501_low_11 (Length: 369)

Name: NF12501_low_11
Description: NF12501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12501_low_11
NF12501_low_11
[»] chr5 (38 HSPs)
chr5 (63-353)||(42936615-42936906)
chr5 (1-63)||(21387631-21387692)
chr5 (1-62)||(20988685-20988745)
chr5 (1-65)||(4568035-4568098)
chr5 (1-66)||(15510324-15510388)
chr5 (4-62)||(5062250-5062307)
chr5 (2-66)||(12937944-12938007)
chr5 (2-66)||(12952095-12952158)
chr5 (4-63)||(5061022-5061080)
chr5 (1-48)||(15509203-15509250)
chr5 (2-48)||(2472492-2472538)
chr5 (4-62)||(3076818-3076875)
chr5 (2-48)||(6914723-6914769)
chr5 (2-48)||(16802351-16802397)
chr5 (2-48)||(19051001-19051047)
chr5 (2-48)||(37371065-37371111)
chr5 (2-63)||(1982706-1982766)
chr5 (2-63)||(2472324-2472384)
chr5 (2-47)||(6914874-6914919)
chr5 (2-47)||(32780144-32780189)
chr5 (2-63)||(37380361-37380421)
chr5 (1-66)||(41905166-41905230)
chr5 (2-62)||(16802196-16802255)
chr5 (1-48)||(4566959-4567006)
chr5 (1-48)||(32521983-32522030)
chr5 (1-47)||(7345451-7345497)
chr5 (1-47)||(18693707-18693753)
chr5 (1-47)||(20991710-20991756)
chr5 (1-35)||(22650689-22650723)
chr5 (1-66)||(12936163-12936227)
chr5 (2-47)||(12952796-12952841)
chr5 (2-47)||(19050758-19050803)
chr5 (10-63)||(21306585-21306637)
chr5 (10-63)||(21314423-21314475)
chr5 (9-62)||(28236962-28237014)
chr5 (2-47)||(38394765-38394810)
chr5 (2-66)||(1982900-1982963)
chr5 (1-65)||(19525349-19525412)
[»] chr3 (62 HSPs)
chr3 (1-66)||(53047888-53047952)
chr3 (1-65)||(11220719-11220782)
chr3 (1-65)||(32973131-32973194)
chr3 (1-48)||(55443611-55443658)
chr3 (1-63)||(52292588-52292649)
chr3 (1-66)||(19579211-19579275)
chr3 (1-62)||(32974284-32974344)
chr3 (1-62)||(48035385-48035445)
chr3 (2-66)||(46987316-46987379)
chr3 (1-65)||(53342708-53342771)
chr3 (1-48)||(5416206-5416253)
chr3 (2-65)||(12105351-12105413)
chr3 (1-64)||(39288500-39288562)
chr3 (1-48)||(52293584-52293631)
chr3 (1-47)||(5417109-5417155)
chr3 (1-62)||(7820385-7820445)
chr3 (1-62)||(19579355-19579415)
chr3 (2-66)||(19283725-19283788)
chr3 (2-66)||(23886107-23886170)
chr3 (2-62)||(23886888-23886947)
chr3 (2-62)||(46988531-46988590)
chr3 (2-62)||(51214228-51214287)
chr3 (1-65)||(53049098-53049161)
chr3 (2-65)||(13041939-13042001)
chr3 (2-65)||(13050016-13050078)
chr3 (1-48)||(55442602-55442649)
chr3 (1-47)||(1301041-1301087)
chr3 (8-62)||(30431370-30431423)
chr3 (1-63)||(52705369-52705430)
chr3 (2-63)||(2225086-2225146)
chr3 (1-62)||(7583465-7583525)
chr3 (1-46)||(39287480-39287525)
chr3 (2-47)||(42570021-42570066)
chr3 (1-66)||(42633947-42634011)
chr3 (8-61)||(53347066-53347118)
chr3 (10-62)||(7583705-7583756)
chr3 (1-65)||(48825804-48825867)
chr3 (2-62)||(54109491-54109550)
chr3 (1-48)||(11219438-11219485)
chr3 (1-48)||(11483048-11483095)
chr3 (2-65)||(13997250-13997312)
chr3 (1-64)||(33563942-33564004)
chr3 (1-47)||(8372677-8372723)
chr3 (8-66)||(12105553-12105610)
chr3 (1-47)||(29536723-29536769)
chr3 (1-47)||(40502276-40502322)
chr3 (9-63)||(47855407-47855460)
chr3 (1-47)||(54654027-54654073)
chr3 (2-47)||(7575540-7575585)
chr3 (2-35)||(30431560-30431593)
chr3 (2-63)||(30431949-30432009)
chr3 (2-47)||(30838532-30838577)
chr3 (1-66)||(41387494-41387558)
chr3 (2-47)||(44384358-44384403)
chr3 (13-66)||(46988335-46988387)
chr3 (2-63)||(51213445-51213505)
chr3 (10-62)||(12106577-12106628)
chr3 (2-62)||(19283923-19283982)
chr3 (4-48)||(20486021-20486065)
chr3 (14-66)||(23886691-23886742)
chr3 (1-65)||(41386122-41386185)
chr3 (2-66)||(51213639-51213702)
[»] scaffold0038 (2 HSPs)
scaffold0038 (1-48)||(25930-25977)
scaffold0038 (1-60)||(26977-27036)
[»] chr6 (22 HSPs)
chr6 (1-48)||(28225432-28225479)
chr6 (1-62)||(19367712-19367772)
chr6 (2-66)||(21749864-21749927)
chr6 (1-60)||(28226479-28226538)
chr6 (1-62)||(13173032-13173092)
chr6 (1-62)||(19368579-19368639)
chr6 (2-62)||(5999645-5999704)
chr6 (1-48)||(8447229-8447276)
chr6 (1-48)||(8456033-8456080)
chr6 (2-64)||(12202354-12202415)
chr6 (2-48)||(17916531-17916577)
chr6 (8-62)||(19655046-19655099)
chr6 (1-47)||(26584098-26584144)
chr6 (2-63)||(8224400-8224460)
chr6 (2-63)||(11104439-11104499)
chr6 (2-63)||(12202191-12202251)
chr6 (2-66)||(33328366-33328429)
chr6 (4-63)||(18773648-18773706)
chr6 (1-64)||(31738356-31738418)
chr6 (2-48)||(17915717-17915763)
chr6 (9-62)||(12203340-12203392)
chr6 (2-47)||(27440237-27440282)
[»] chr4 (29 HSPs)
chr4 (1-48)||(2310843-2310890)
chr4 (1-66)||(12396935-12396999)
chr4 (4-64)||(29833365-29833424)
chr4 (1-63)||(44690916-44690978)
chr4 (1-62)||(937159-937219)
chr4 (1-62)||(29834493-29834553)
chr4 (2-63)||(30672126-30672186)
chr4 (2-62)||(26428651-26428710)
chr4 (2-66)||(28189359-28189422)
chr4 (2-65)||(23202232-23202294)
chr4 (1-47)||(526780-526826)
chr4 (2-48)||(15317710-15317756)
chr4 (4-62)||(15445431-15445488)
chr4 (2-48)||(23203024-23203070)
chr4 (2-47)||(26202448-26202493)
chr4 (2-66)||(8516914-8516977)
chr4 (1-65)||(56000279-56000342)
chr4 (2-48)||(306585-306631)
chr4 (1-47)||(11115041-11115087)
chr4 (10-64)||(15446740-15446793)
chr4 (1-47)||(28103547-28103593)
chr4 (1-47)||(30671003-30671049)
chr4 (1-47)||(33377425-33377471)
chr4 (2-48)||(46794848-46794894)
chr4 (2-63)||(23202830-23202890)
chr4 (2-63)||(28509935-28509995)
chr4 (4-65)||(30441601-30441661)
chr4 (1-62)||(56001329-56001389)
chr4 (1-65)||(39590933-39590996)
[»] chr1 (50 HSPs)
chr1 (1-64)||(2236806-2236868)
chr1 (1-62)||(35683050-35683110)
chr1 (2-66)||(25866734-25866797)
chr1 (1-64)||(34532763-34532825)
chr1 (1-63)||(2238039-2238100)
chr1 (1-63)||(48974467-48974528)
chr1 (2-63)||(51760033-51760093)
chr1 (1-65)||(35684263-35684326)
chr1 (2-62)||(52370978-52371037)
chr1 (1-64)||(1873915-1873977)
chr1 (2-65)||(25035350-25035412)
chr1 (2-65)||(25040563-25040625)
chr1 (1-48)||(26056208-26056255)
chr1 (2-65)||(28999832-28999894)
chr1 (1-48)||(34531671-34531718)
chr1 (1-48)||(48935171-48935218)
chr1 (3-66)||(52371847-52371909)
chr1 (1-63)||(14390252-14390313)
chr1 (8-62)||(51424246-51424299)
chr1 (2-63)||(28309756-28309816)
chr1 (2-63)||(29001184-29001244)
chr1 (1-62)||(33850297-33850357)
chr1 (1-62)||(33943621-33943681)
chr1 (1-42)||(48934255-48934296)
chr1 (1-62)||(48973193-48973253)
chr1 (1-66)||(50678357-50678421)
chr1 (1-61)||(9123460-9123519)
chr1 (2-66)||(25866142-25866205)
chr1 (2-66)||(52371171-52371234)
chr1 (8-47)||(31860526-31860565)
chr1 (2-65)||(38458078-38458140)
chr1 (2-65)||(47512146-47512208)
chr1 (9-47)||(3978053-3978091)
chr1 (1-47)||(3979374-3979420)
chr1 (2-64)||(20171224-20171285)
chr1 (2-48)||(25865962-25866008)
chr1 (1-63)||(26054892-26054952)
chr1 (2-48)||(27114871-27114917)
chr1 (2-64)||(27115514-27115575)
chr1 (4-62)||(30548491-30548548)
chr1 (2-48)||(32823466-32823512)
chr1 (2-48)||(32824196-32824242)
chr1 (9-63)||(33941311-33941364)
chr1 (2-48)||(43190560-43190606)
chr1 (1-47)||(47560148-47560194)
chr1 (2-48)||(51760734-51760780)
chr1 (1-62)||(27690690-27690750)
chr1 (8-65)||(46280839-46280895)
chr1 (1-65)||(1061513-1061576)
chr1 (8-48)||(47511375-47511415)
[»] chr7 (50 HSPs)
chr7 (1-63)||(18801209-18801270)
chr7 (1-66)||(30224037-30224101)
chr7 (1-66)||(34558362-34558426)
chr7 (1-62)||(41616619-41616679)
chr7 (1-65)||(41126231-41126294)
chr7 (1-64)||(36673897-36673959)
chr7 (1-48)||(38001512-38001559)
chr7 (1-63)||(2904108-2904169)
chr7 (2-64)||(10338375-10338436)
chr7 (1-63)||(41127232-41127293)
chr7 (2-63)||(21171289-21171349)
chr7 (2-47)||(32610872-32610917)
chr7 (8-65)||(35480200-35480256)
chr7 (1-62)||(38778972-38779032)
chr7 (2-62)||(18668758-18668817)
chr7 (2-66)||(32610675-32610738)
chr7 (8-64)||(40501226-40501281)
chr7 (2-62)||(43704603-43704662)
chr7 (2-66)||(43705457-43705520)
chr7 (8-63)||(1885309-1885363)
chr7 (8-63)||(33228841-33228895)
chr7 (2-65)||(37373526-37373588)
chr7 (4-67)||(41618563-41618625)
chr7 (1-47)||(25153667-25153713)
chr7 (2-48)||(29754748-29754794)
chr7 (2-48)||(37725887-37725933)
chr7 (1-62)||(34557392-34557452)
chr7 (2-66)||(18670565-18670628)
chr7 (9-65)||(48755617-48755672)
chr7 (9-64)||(6772721-6772775)
chr7 (9-48)||(6773459-6773498)
chr7 (8-63)||(8439760-8439814)
chr7 (8-63)||(10338181-10338235)
chr7 (1-48)||(19848895-19848942)
chr7 (8-63)||(40501523-40501577)
chr7 (1-48)||(43935193-43935240)
chr7 (2-65)||(47810201-47810263)
chr7 (8-62)||(1884235-1884288)
chr7 (8-62)||(7345909-7345962)
chr7 (2-48)||(21171548-21171594)
chr7 (2-48)||(37375156-37375202)
chr7 (1-47)||(43930328-43930374)
chr7 (1-47)||(43936201-43936247)
chr7 (2-47)||(3699809-3699854)
chr7 (2-47)||(8439954-8439999)
chr7 (1-62)||(38002575-38002635)
chr7 (2-47)||(43705604-43705649)
chr7 (2-63)||(47809484-47809544)
chr7 (2-66)||(1904082-1904145)
chr7 (2-62)||(36702772-36702831)
[»] scaffold0177 (1 HSPs)
scaffold0177 (4-64)||(1748-1807)
[»] chr2 (35 HSPs)
chr2 (1-63)||(3665218-3665279)
chr2 (8-66)||(5564050-5564107)
chr2 (1-63)||(6706920-6706981)
chr2 (1-47)||(41313328-41313374)
chr2 (2-64)||(43015532-43015593)
chr2 (2-62)||(17179313-17179372)
chr2 (3-63)||(17859329-17859388)
chr2 (2-66)||(30202684-30202747)
chr2 (4-63)||(3254850-3254908)
chr2 (8-63)||(5565213-5565267)
chr2 (2-65)||(17179052-17179114)
chr2 (1-43)||(3255939-3255981)
chr2 (1-47)||(3666329-3666375)
chr2 (2-64)||(27262706-27262767)
chr2 (2-64)||(27264635-27264696)
chr2 (1-47)||(33836778-33836824)
chr2 (1-62)||(12852881-12852941)
chr2 (2-63)||(14482153-14482213)
chr2 (1-62)||(14573869-14573929)
chr2 (2-62)||(2306723-2306781)
chr2 (1-43)||(4630145-4630187)
chr2 (2-48)||(5435167-5435213)
chr2 (1-47)||(7038393-7038439)
chr2 (2-64)||(21541054-21541115)
chr2 (1-47)||(33837816-33837862)
chr2 (1-63)||(41312494-41312555)
chr2 (1-47)||(42027202-42027248)
chr2 (1-47)||(42596569-42596615)
chr2 (1-62)||(12854165-12854225)
chr2 (2-47)||(15808089-15808134)
chr2 (2-63)||(17858452-17858512)
chr2 (2-47)||(17858646-17858691)
chr2 (2-47)||(21545131-21545176)
chr2 (2-47)||(30202945-30202990)
chr2 (1-61)||(2305536-2305595)
[»] chr8 (30 HSPs)
chr8 (2-63)||(41178732-41178792)
chr8 (2-62)||(3271155-3271214)
chr8 (2-62)||(21551917-21551976)
chr8 (2-62)||(21552963-21553022)
chr8 (1-65)||(24068322-24068385)
chr8 (3-62)||(6844636-6844694)
chr8 (9-64)||(40102214-40102268)
chr8 (2-48)||(8502336-8502382)
chr8 (2-64)||(15988997-15989058)
chr8 (1-66)||(6843746-6843810)
chr8 (2-47)||(15989153-15989198)
chr8 (2-47)||(39349501-39349546)
chr8 (286-338)||(5979643-5979695)
chr8 (1-49)||(19913499-19913547)
chr8 (2-66)||(30865187-30865250)
chr8 (8-63)||(45385862-45385916)
chr8 (8-66)||(3271889-3271946)
chr8 (2-44)||(3272087-3272129)
chr8 (2-48)||(21553770-21553816)
chr8 (8-66)||(30864523-30864580)
chr8 (1-47)||(38591068-38591114)
chr8 (2-48)||(40103000-40103046)
chr8 (2-47)||(3237702-3237747)
chr8 (2-63)||(4675940-4676000)
chr8 (2-47)||(15989332-15989377)
chr8 (2-63)||(29441610-29441670)
chr8 (1-62)||(37274881-37274942)
chr8 (10-66)||(3612241-3612296)
chr8 (2-62)||(7561794-7561853)
chr8 (2-66)||(14433613-14433676)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-65)||(2329-2389)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-64)||(5162-5224)
[»] scaffold0007 (2 HSPs)
scaffold0007 (2-65)||(28124-28186)
scaffold0007 (2-63)||(28320-28380)
[»] scaffold0839 (1 HSPs)
scaffold0839 (8-66)||(16-73)
[»] scaffold0630 (2 HSPs)
scaffold0630 (2-48)||(2018-2064)
scaffold0630 (2-48)||(3114-3160)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-47)||(96169-96215)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-47)||(47079-47124)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 63 - 353
Target Start/End: Complemental strand, 42936906 - 42936615
Alignment:
Q  63 ttttctgaattaaacatttttagtataatatttttggcacccaacaatttgtaaaagcaaacnnnnnnngaagaataaaatagtagatacagaaatgggt 162  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||    
T  42936906 ttttctgaattaaacatttttagtataatttttttggcacccaacaatttgtaaaagcaaacaaaaaaagaagaataaaatagtagatacagaaatgggt 42936807  T
Q  163 ttggttgcttttggaattcgggaagatgaatcttcaacaatttttgcaccgaagnnnnnnntggtacattgaataaaagaatccatggcctccccttcat 262  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  42936806 ttggttgcttttggaatttgggaagataaatcttcaacaatttttgcaccgaagaaaaaaatggtacattgaataaaagaatccatggcctccccttcat 42936707  T
Q  263 caacttctttcctcctgcttcgttgttaactttatg-tttatttggagtaaaaagacattgattgagatagacaaagcaggaaggaatatta 353  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42936706 caacttctttcctcctgcttcgttgttaactttatgttttatttggagtaaaaagacattgattgagatagacaaagcaggaagaaatatta 42936615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 21387692 - 21387631
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||    
T  21387692 tagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcttgtattaagcct 21387631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20988745 - 20988685
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  20988745 tagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaa-gcatgtattaagcc 20988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4568035 - 4568098
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  4568035 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagccttt 4568098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15510324 - 15510388
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||||||    
T  15510324 tagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctttt 15510388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 5062250 - 5062307
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  5062250 ttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 5062307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12937944 - 12938007
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||| || |||||||||||||||    
T  12937944 agttaagggaccaaaatgaaattcaaaaataagttaagggatcaaa-gcatgtattaagcctttt 12938007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12952095 - 12952158
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||| || |||||||||||||||    
T  12952095 agttaagggaccaaaatgaaattcaaaaataagttaagggatcaaa-gcatgtattaagcctttt 12952158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 5061080 - 5061022
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||    
T  5061080 ttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 5061022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15509250 - 15509203
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||    
T  15509250 tagttaggggaccaaaataaaatccgaaaataagttaagggaccaaag 15509203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 2472492 - 2472538
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  2472492 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 2472538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 3076875 - 3076818
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||||||    
T  3076875 ttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 3076818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 6914769 - 6914723
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  6914769 agttatgggaccaaaatgaaattcaaaaataagttaagggaccaaag 6914723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 16802351 - 16802397
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  16802351 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 16802397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 19051001 - 19051047
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  19051001 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaag 19051047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 37371111 - 37371065
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  37371111 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 37371065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 1982766 - 1982706
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| ||||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||    
T  1982766 agttaagggaccaaaataaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 1982706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 2472384 - 2472324
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||| || ||||||||||||    
T  2472384 agttaagggaccaaaatgaaattcaaaaataagttaagggagcaaa-gcatgtattaagcct 2472324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 6914874 - 6914919
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  6914874 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 6914919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 32780144 - 32780189
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  32780144 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 32780189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 37380361 - 37380421
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||| || ||||||||||||    
T  37380361 agttacgggaccaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 37380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41905230 - 41905166
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| |  |||||||||||||||    
T  41905230 tagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaatg-atgtattaagcctttt 41905166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 16802255 - 16802196
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| |||||||| || || |||||||||||    
T  16802255 agttaagggaccaaaatgaaattcaaaaataagttaagggacccaa-gcatgtattaagcc 16802196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4567006 - 4566959
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||| ||||||||||| |||||||| || ||||||||||||    
T  4567006 tagttaggggatcaaaatgaaatccgaaaatatgttaagggaccaaag 4566959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32521983 - 32522030
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||| | ||| ||||||||    
T  32521983 tagttaggggaccaaaatgaaatccgaaaataaattaagagaccaaag 32522030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7345451 - 7345497
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||| ||||||||||||||||| ||||||||| |||||| ||||    
T  7345451 tagttagaggaccaaaatgaaattcaaaaataagttaagggatcaaa 7345497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18693753 - 18693707
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| ||||||||||| |||||| ||||||||| |||||||||||    
T  18693753 tagttaagggaccaaaataaaattcaaaaataagttaagggaccaaa 18693707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20991710 - 20991756
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  20991710 tagttagggggccaaaatgaaatccgaaaataagttaagggatcaaa 20991756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 22650689 - 22650723
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagt 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  22650689 tagttaggggaccaaaatgaaatccgaaaataagt 22650723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12936163 - 12936227
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||  | ||||||||| ||||||| ||| |  |||||||||||||||    
T  12936163 tagttaggggaccaaaatgaaaaccaaaaataagttaagggactaaatg-atgtattaagcctttt 12936227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 12952796 - 12952841
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||  ||||||||| |||||||||||    
T  12952796 agttaagggaccaaaatgaaatttaaaaataagttaagggaccaaa 12952841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 19050803 - 19050758
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||| |||||| | ||||||||| |||||||||||    
T  19050803 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 19050758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 21306637 - 21306585
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||| ||||||||| |||||| |||| || ||||||||||||    
T  21306637 gaccaaaatgaaattcaaaaataagttaagggatcaaa-gcatgtattaagcct 21306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 21314475 - 21314423
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||| ||||||||| |||||| |||| || ||||||||||||    
T  21314475 gaccaaaatgaaattcaaaaataagttaagggatcaaa-gcatgtattaagcct 21314423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 28236962 - 28237014
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||| |||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  28236962 ggactaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 28237014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 38394765 - 38394810
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||| | |||||| ||||||||| |||||||||||    
T  38394765 agttaggggaccaaattaaaattcaaaaataagttaagggaccaaa 38394810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1982900 - 1982963
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| ||||| |||||||||||  ||||||||| ||||||||||| || ||||||||| |||||    
T  1982900 agttaagggacgaaaatgaaattaaaaaataagttaagggaccaaa-gcatgtattaagactttt 1982963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19525349 - 19525412
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||| |||||  | ||||||||| ||||||||||| |  ||||||||||||||    
T  19525349 tagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatg-atgtattaagccttt 19525412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53047952 - 53047888
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||||    
T  53047952 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctttt 53047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 11220719 - 11220782
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  11220719 tagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 11220782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32973194 - 32973131
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  32973194 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagccttt 32973131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 55443611 - 55443658
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55443611 tagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaag 55443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 52292649 - 52292588
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  52292649 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 52292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19579275 - 19579211
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||| || |||||||||||||||    
T  19579275 tagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaa-gcatgtattaagcctttt 19579211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32974284 - 32974344
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  32974284 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 32974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48035385 - 48035445
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  48035385 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 48035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 46987379 - 46987316
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  46987379 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 46987316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 53342771 - 53342708
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||||||||| ||||||||||| |||| |||||| || ||||||||||||||    
T  53342771 tagttaggggaccaaaatgaaatccgaaaataagttaaggaaccaaa-gcatgtattaagccttt 53342708  T

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Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5416253 - 5416206
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  5416253 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaag 5416206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 12105413 - 12105351
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  12105413 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 12105351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 39288500 - 39288562
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||| || |||||||||||||    
T  39288500 tagttaggggaccaaaatgaaatccgaaaataagttaagtgaccaaa-gcatgtattaagcctt 39288562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 52293584 - 52293631
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  52293584 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaag 52293631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5417109 - 5417155
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  5417109 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa 5417155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7820445 - 7820385
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  7820445 tagttagaggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 7820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19579355 - 19579415
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  19579355 tagttaagggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 19579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 19283788 - 19283725
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||  | |||||||||||||||    
T  19283788 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-acatgtattaagcctttt 19283725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 23886170 - 23886107
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| |  |||||||||||||||    
T  23886170 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gtatgtattaagcctttt 23886107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 23886888 - 23886947
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  23886888 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 23886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 46988531 - 46988590
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  46988531 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 46988590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 51214228 - 51214287
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  51214228 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 51214287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 53049098 - 53049161
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||  | ||||||||||||||    
T  53049098 tagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa-acatgtattaagccttt 53049161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 13042001 - 13041939
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  13042001 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 13041939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 13050078 - 13050016
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  13050078 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 13050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 55442649 - 55442602
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||||    
T  55442649 tagttaggggaccaaaatgaaatttgaaaataagttaagggatcaaag 55442602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1301087 - 1301041
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||    
T  1301087 tagttatgggaccaaaataaaattcgaaaataagttaagggaccaaa 1301041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 30431423 - 30431370
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  30431423 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 30431370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 52705369 - 52705430
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||| |||||||||||  ||||| |||| || ||||||||||||    
T  52705369 tagttaggggaccaaaatgaaatccgaaaataagttgagggatcaaa-gcatgtattaagcct 52705430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 2225086 - 2225146
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||| || ||||||||||||    
T  2225086 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 2225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7583525 - 7583465
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||| ||||||||||||||| ||||||||||| || |||||||| || |||||||||||    
T  7583525 tagttagtggaccaaaatgaaatccgaaaataagttaatggaccaaa-gcatgtattaagcc 7583465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39287525 - 39287480
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaa 46  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  39287525 tagttagaggaccaaaatgaaatccgaaaataagttaagggaccaa 39287480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 42570066 - 42570021
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||    
T  42570066 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa 42570021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42633947 - 42634011
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||| ||||| || ||||||||| ||||||||||| |  |||||||||||||||    
T  42633947 tagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaatg-atgtattaagcctttt 42634011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 53347066 - 53347118
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagc 61  Q
    |||||||||||||||| ||||||||||| ||||||||||| || ||||||||||    
T  53347066 gggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagc 53347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 7583756 - 7583705
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  7583756 gaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 7583705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 48825867 - 48825804
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||| | |||||| |||||||||||||||| |||||||||||  | ||||||||||||||    
T  48825867 tagttagggaatcaaaataaaattcgaaaataagttaagggaccaaa-acatgtattaagccttt 48825804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 54109550 - 54109491
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| ||||| |||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  54109550 agttaagggactaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 54109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11219485 - 11219438
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| | ||||||||| || |||||||||    
T  11219485 tagttaggggaccaaaatgaaatccaaaaataagttaacggaccaaag 11219438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11483048 - 11483095
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  11483048 tagttaagggaccaaaatgaaatctgaaaataagttaagggaccaaag 11483095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 13997312 - 13997250
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| |||||||||  | |||||||| || ||||||||||||||    
T  13997312 agttaagggaccaaaatgaaattcaaaaataagttgaaggaccaaa-gcatgtattaagccttt 13997250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 33564004 - 33563942
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||| |||||||||| | ||||||||| |||||||||||  | |||||||||||||    
T  33564004 tagttaggggactaaaatgaaatccaaaaataagttaagggaccaaa-acatgtattaagcctt 33563942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8372677 - 8372723
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||||||||  | ||||||||| |||||||||||    
T  8372677 tagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaa 8372723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 12105553 - 12105610
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||| ||||||||||||| ||||||||| ||||||||||| || |||||||||| ||||    
T  12105553 gggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcttttt 12105610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29536769 - 29536723
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  29536769 tagttagaggatcaaaatgaaatccaaaaataagtcaagggaccaaa 29536723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40502276 - 40502322
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| |||| | ||||||||| |||||||||||    
T  40502276 tagttaggggaccaaaataaaatccaaaaataagttaagggaccaaa 40502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 47855407 - 47855460
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||    
T  47855407 ggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 47855460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 54654027 - 54654073
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  54654027 tagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 54654073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 7575540 - 7575585
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||| ||||||    
T  7575540 agttaagggaccaaaatgaaattcaaaaataagttaaggaaccaaa 7575585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 30431560 - 30431593
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagt 35  Q
    ||||| ||||||||||||||||||||||||||||    
T  30431560 agttaagggaccaaaatgaaattcgaaaataagt 30431593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 30432009 - 30431949
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||| ||||||||||||| |||||||||  |||||||||| || ||||||||||||    
T  30432009 agttaagggatcaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 30431949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 30838532 - 30838577
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| ||||||||||| |||||| ||||||||| |||||||||||    
T  30838532 agttaagggaccaaaataaaattcaaaaataagttaagggaccaaa 30838577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 41387494 - 41387558
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||| |||||  | ||||||||| ||||||||||| |  |||||||||||||||    
T  41387494 tagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaatg-atgtattaagcctttt 41387558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 44384358 - 44384403
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| ||||| |||||||||||| ||||||||| |||||||||||    
T  44384358 agttaagggactaaaatgaaattcaaaaataagttaagggaccaaa 44384403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 46988387 - 46988335
Alignment:
Q  13 caaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||||||| ||||    
T  46988387 caaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcttttt 46988335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 51213505 - 51213445
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| ||||| |||||||||||| ||||||||| ||| ||||||| || ||||||||||||    
T  51213505 agttaagggacgaaaatgaaattcaaaaataagttaagagaccaaa-gcatgtattaagcct 51213445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 12106577 - 12106628
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||| ||||||||| ||| ||||||| || |||||||||||    
T  12106577 gaccaaaatgaaattcaaaaataagttaagagaccaaa-gcatgtattaagcc 12106628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 19283923 - 19283982
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| ||||||||||| |||||| ||||||||| || |||||||| || |||||||||||    
T  19283923 agttaagggaccaaaataaaattcaaaaataagttaaaggaccaaa-gcatgtattaagcc 19283982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 20486065 - 20486021
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||| ||||||||||||||||| ||||||||| |||| |||||||    
T  20486065 ttagaggaccaaaatgaaattcaaaaataagttaaggtaccaaag 20486021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 23886742 - 23886691
Alignment:
Q  14 aaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||  ||||||||| ||||||||||| || |||||||||||||||    
T  23886742 aaaatgaaattaaaaaataagttaagggaccaaa-gcatgtattaagcctttt 23886691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41386185 - 41386122
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||| |||||  | ||||||||| ||||||||||| |  ||||||||||||||    
T  41386185 tagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaacg-atgtattaagccttt 41386122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 51213639 - 51213702
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||| |||  | |||||||||||||||    
T  51213639 agttaagggatcaaaatgaaattcaaaaataagttaagggactaaa-acatgtattaagcctttt 51213702  T

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Target: scaffold0038 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25977 - 25930
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25977 tagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaag 25930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 26977 - 27036
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaag 60  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||||||| |||||||||    
T  26977 tagttaggggaccaaaatgaaatccgaaaataagttaacggatcaaaggcatgtattaag 27036  T

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Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28225479 - 28225432
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28225479 tagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaag 28225432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 19367772 - 19367712
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||    
T  19367772 tagttaggggaccaaaatgaaattcgaaaataagttaagggacgaaa-gcatgtattaagcc 19367712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 21749864 - 21749927
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  21749864 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 21749927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28226479 - 28226538
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaag 60  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||||||| |||||||||    
T  28226479 tagttaggggaccaaaatgaaatccgaaaataagttaacggatcaaaggcatgtattaag 28226538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13173092 - 13173032
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||| || |||||||||||    
T  13173092 tagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 13173032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19368579 - 19368639
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  19368579 tagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 19368639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 5999645 - 5999704
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  5999645 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 5999704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8447276 - 8447229
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  8447276 tagttaggggaccaaaatgaaatccgaaaataagttaagggactaaag 8447229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8456080 - 8456033
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  8456080 tagttaggggaccaaaatgaaatccgaaaataagttaagggactaaag 8456033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 12202354 - 12202415
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||| || |||||||||||||    
T  12202354 agttaagggaccaaaatgaaattaaaaaataagttaagggaccaaa-gcatgtattaagcctt 12202415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 17916531 - 17916577
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  17916531 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 17916577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 19655046 - 19655099
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  19655046 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 19655099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26584098 - 26584144
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||    
T  26584098 tagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa 26584144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 8224400 - 8224460
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| ||| ||||| ||||||||||| || ||||||||||||    
T  8224400 agttaagggaccaaaatgaaattcaaaattaagttaagggaccaaa-gcatgtattaagcct 8224460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 11104439 - 11104499
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||| || ||||||||||||    
T  11104439 agttaagggaccaaaatgaaattcaaaaataagttaaaggaccaaa-gcatgtattaagcct 11104499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 12202251 - 12202191
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||| || ||||||||||||    
T  12202251 agttaagggaccaaaatgaaattcaaaaataagttaagggacgaaa-gcatgtattaagcct 12202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 33328429 - 33328366
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| || |||||||| ||||||    
T  33328429 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaaacctttt 33328366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 18773706 - 18773648
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||||| | ||||||||| |||||| |||| || ||||||||||||    
T  18773706 ttaggggaccaaaatgaaatccaaaaataagttaagggatcaaa-gcatgtattaagcct 18773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31738418 - 31738356
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||| |||||  | ||||||||| |||||||||||||  |||||||||||||    
T  31738418 tagttaggggaccaaattgaaaaccaaaaataagttaagggaccaaagg-atgtattaagcctt 31738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 17915763 - 17915717
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  17915763 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaag 17915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 12203340 - 12203392
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||| ||||||||| ||||||| ||| || |||||||||||    
T  12203340 ggaccaaaatgaaattcaaaaataagttaagggactaaa-gcatgtattaagcc 12203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 27440237 - 27440282
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  27440237 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa 27440282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2310843 - 2310890
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2310843 tagttaggggaccaaaatgaaattcgaaaataagttaagggaccaaag 2310890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12396935 - 12396999
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||  | |||||||||||||||    
T  12396935 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-acatgtattaagcctttt 12396999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 29833424 - 29833365
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  29833424 ttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctt 29833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 44690916 - 44690978
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||| || ||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  44690916 tagttatggaaccaaaatgaaatccgaaaataagttaagggaccaaaagcatgtattaagcct 44690978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 937159 - 937219
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||| || |||||||||||    
T  937159 tagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaa-gcatgtattaagcc 937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29834493 - 29834553
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  29834493 tagttaggggatcaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 29834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 30672126 - 30672186
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  30672126 agttacgggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 30672186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 26428710 - 26428651
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||||||    
T  26428710 agttaggggaccaaactgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 26428651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 28189359 - 28189422
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||| || |||||||||||||||    
T  28189359 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcctttt 28189422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 23202294 - 23202232
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||||| || ||||||||||||||    
T  23202294 agttaagggaccaaaatgaaattcaaaaataaattaagggaccaaa-gcatgtattaagccttt 23202232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 526780 - 526826
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||    
T  526780 tagttaggggaccaaaatgaaatccgaaaataaattaagggaccaaa 526826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 15317756 - 15317710
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  15317756 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 15317710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 15445488 - 15445431
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||||| | ||||||||| ||||||||||| || |||||||||||    
T  15445488 ttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 15445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 23203024 - 23203070
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  23203024 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 23203070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26202448 - 26202493
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  26202448 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 26202493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 8516914 - 8516977
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| ||||||||| |||||||| ||||||||| ||||||||||| |  |||||||||||||||    
T  8516914 agttaagggaccaaattgaaattcaaaaataagttaagggaccaaa-gtatgtattaagcctttt 8516977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 56000342 - 56000279
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||| |||||||||| || ||||||||| |||||| |||| || ||||||||||||||    
T  56000342 tagttaggggatcaaaatgaaaatcaaaaataagttaagggatcaaa-gcatgtattaagccttt 56000279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 306631 - 306585
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  306631 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaag 306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11115041 - 11115087
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||||||||   |||||||||| |||||||||||    
T  11115041 tagttaggggaccaaaatgaaaactgaaaataagttaagggaccaaa 11115087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 15446740 - 15446793
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||| | ||||||||| ||||||||||| || |||||||||||||    
T  15446740 gaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcctt 15446793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28103547 - 28103593
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  28103547 tagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 28103593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30671049 - 30671003
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| ||||||||||| ||| |||||||    
T  30671049 tagttaagggaccaaaatgaaatccgaaaataagttaagagaccaaa 30671003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33377425 - 33377471
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| || ||||||||| |||||||||||    
T  33377425 tagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaa 33377471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 46794894 - 46794848
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  46794894 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaag 46794848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 23202890 - 23202830
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||| ||||||||||||| |||||||||  |||||||||| || ||||||||||||    
T  23202890 agttaagggatcaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 23202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 28509935 - 28509995
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||| ||||||||||||| |||||||||  |||||||||| || ||||||||||||    
T  28509935 agttaagggatcaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 28509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 30441661 - 30441601
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||| |||||||| ||||||||| ||||||| |||  | ||||||||||||||    
T  30441661 ttaggggaccaaattgaaattcaaaaataagttaagggactaaa-acatgtattaagccttt 30441601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 56001329 - 56001389
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||| ||||||||||| |  ||||||||| ||||||||||| || |||||||||||    
T  56001329 tagttagggggccaaaatgaaaataaaaaataagttaagggaccaaa-gcatgtattaagcc 56001389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39590996 - 39590933
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||| |||||  | ||||||||| ||||||||||| |  ||||||||||||||    
T  39590996 tagttaggggaccaaagtgaaaaccaaaaataagttaagggaccaaatg-atgtattaagccttt 39590933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2236868 - 2236806
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  2236868 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctt 2236806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35683110 - 35683050
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  35683110 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 35683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 25866734 - 25866797
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  25866734 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 25866797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34532763 - 34532825
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||| |||||||||||||||| || |||||||| || |||||||||||||    
T  34532763 tagttaggggaccaaaataaaattcgaaaataagttaaaggaccaaa-gcatgtattaagcctt 34532825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2238039 - 2238100
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  2238039 tagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 2238100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 48974467 - 48974528
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  48974467 tagttagggaaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 48974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 51760093 - 51760033
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  51760093 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 51760033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 35684263 - 35684326
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||||| |||| ||||||||||| || |||||||| || ||||||||||||||    
T  35684263 tagttaggggaccaaaataaaatccgaaaataagttaatggaccaaa-gcatgtattaagccttt 35684326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 52371037 - 52370978
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  52371037 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 52370978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1873915 - 1873977
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||| ||||| |||||||||| |||||| |||| || |||||||||||||    
T  1873915 tagttaggggaccaaaataaaatttgaaaataagttaagggatcaaa-gcatgtattaagcctt 1873977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 25035412 - 25035350
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||| |||||    
T  25035412 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaaaccttt 25035350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 25040625 - 25040563
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||| |||||    
T  25040625 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaaaccttt 25040563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 26056208 - 26056255
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  26056208 tagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaag 26056255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 28999894 - 28999832
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| ||||||||| |||| ||||||||  ||||||||||||||    
T  28999894 agttaagggaccaaaatgaaattcaaaaataagttaaggaaccaaagg-atgtattaagccttt 28999832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 34531718 - 34531671
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  34531718 tagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaag 34531671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 48935171 - 48935218
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  48935171 tagttaggggaccaaaatgaaatccgaaaataagttaagggacgaaag 48935218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 52371847 - 52371909
Alignment:
Q  3 gttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||| ||||||    
T  52371847 gttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaaacctttt 52371909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 14390313 - 14390252
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||||||| || ||||||||||||    
T  14390313 tagttagaggaccaaaatgaaattaaaaaataagttaagggaccaaa-gcatgtattaagcct 14390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 51424299 - 51424246
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||    
T  51424299 gggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcttgtattaagcc 51424246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 28309816 - 28309756
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||| || ||||||||||||    
T  28309816 agttaagggaccaaaatgaaattaaaaaataagttaagggaccaaa-gcatgtattaagcct 28309756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 29001184 - 29001244
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||| ||||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||    
T  29001184 agtttggggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 29001244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33850357 - 33850297
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| |||| | ||||||||| ||||||||||| || |||||||||||    
T  33850357 tagttaggggaccaaaataaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 33850297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33943621 - 33943681
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| |||| | ||||||||| ||||||||||| || |||||||||||    
T  33943621 tagttaggggaccaaaataaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 33943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48934296 - 48934255
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaaggga 42  Q
    ||||||||||||||||||||||| ||||||||||| ||||||    
T  48934296 tagttaggggaccaaaatgaaatccgaaaataagttaaggga 48934255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48973253 - 48973193
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||| |||||||||| ||||||||||| |||| |||||| || |||||||||||    
T  48973253 tagttaggggactaaaatgaaatccgaaaataagttaaggaaccaaa-gcatgtattaagcc 48973193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50678421 - 50678357
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||||||  | |||||||||||||||    
T  50678421 tagttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-tcatgtattaagcctttt 50678357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9123460 - 9123519
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagc 61  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||||| || ||||||||||    
T  9123460 tagttaagggaccaaaataaaatccgaaaataagttaagggaccaaa-gcatgtattaagc 9123519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 25866142 - 25866205
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||| | ||||||||||| || |||||||||||||||    
T  25866142 agttaagggatcaaaatgaaattcaaaaataatttaagggaccaaa-gcatgtattaagcctttt 25866205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 52371171 - 52371234
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||||| |||| |||||| || |||||||||||||||    
T  52371171 agttaagggatcaaaatgaaattcaaaaataagttaaggaaccaaa-gcatgtattaagcctttt 52371234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 31860526 - 31860565
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  31860526 gggaccaaaatgaaattcaaaaataagttaagggaccaaa 31860565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 38458140 - 38458078
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||| || |||||||| |||||    
T  38458140 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa-gcatgtattaaaccttt 38458078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 47512146 - 47512208
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| ||||||||| ||| |||||||  | ||||||||||||||    
T  47512146 agttaagggaccaaaatgaaattcaaaaataagttaagagaccaaa-acatgtattaagccttt 47512208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 3978091 - 3978053
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  3978091 ggaccaaaatgaaattcaaaaataagttaagggaccaaa 3978053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3979374 - 3979420
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  3979374 tagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 3979420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 20171224 - 20171285
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| ||||||||||| |||||| ||||||||| || |||||||| || |||||||||||||    
T  20171224 agttaagggaccaaaataaaattcaaaaataagttaaaggaccaaa-gcatgtattaagcctt 20171285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 25866008 - 25865962
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| |||||| |||||    
T  25866008 agttaagggaccaaaatgaaattcaaaaataagttaagggatcaaag 25865962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26054952 - 26054892
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||| | |||||||||  |||||||||| || ||||||||||||    
T  26054952 tagttaggggaccaaaatgaaatccaaaaataagt-tagggaccaaa-gcatgtattaagcct 26054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 27114871 - 27114917
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  27114871 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaag 27114917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27115514 - 27115575
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||| ||||||||| ||| |||||||  | |||||||||||||    
T  27115514 agttaagggaccaaaatgaaattcaaaaataagttaagagaccaaa-acatgtattaagcctt 27115575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 30548548 - 30548491
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||| |||||||||| | ||||||||| ||||||||||| || |||||||||||    
T  30548548 ttaggggacgaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 30548491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 32823512 - 32823466
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| ||||||||||| |||||| ||||||||| ||||||||||||    
T  32823512 agttaagggaccaaaataaaattcaaaaataagttaagggaccaaag 32823466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 32824196 - 32824242
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  32824196 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaag 32824242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 33941364 - 33941311
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||| |||||| ||||||||| ||||||||||| || ||||||||||||    
T  33941364 ggaccaaaataaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 33941311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 43190560 - 43190606
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||||    
T  43190560 agttaggggaccaaattaaaattcaaaaataagttaagggaccaaag 43190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47560194 - 47560148
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| |||||||||||  |||||||||||    
T  47560194 tagttaggggaccaaagtgaaaatcgaaaataaggtaagggaccaaa 47560148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 51760734 - 51760780
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  51760734 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaag 51760780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27690690 - 27690750
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||| ||| |||||||||| | ||||||||| ||||||||||| || |||||||||||    
T  27690690 tagttaggagacgaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 27690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 46280839 - 46280895
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||| |||||| ||||||||| || |||||||| || ||||||||||||||    
T  46280839 gggaccaaaataaaattcaaaaataagttaaaggaccaaa-gcatgtattaagccttt 46280895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1061513 - 1061576
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||| |||||||||| | ||||||||| ||| || |||| || ||||||||||||||    
T  1061513 tagttaggggactaaaatgaaatccaaaaataagttaagagagcaaa-gcatgtattaagccttt 1061576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 47511415 - 47511375
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||| ||||||||||||| ||||||||| ||||||||||||    
T  47511415 gggatcaaaatgaaattcaaaaataagttaagggaccaaag 47511375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 18801270 - 18801209
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  18801270 tagttaggggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 18801209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 30224037 - 30224101
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||| |||||    
T  30224037 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagtctttt 30224101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 34558362 - 34558426
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||| |||||    
T  34558362 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagtctttt 34558426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 41616679 - 41616619
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  41616679 tagttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 41616619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41126294 - 41126231
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||| || ||||||||||||||    
T  41126294 tagttaggggaccaaaatgaaatctgaaaataagttaagggaccaaa-gcatgtattaagccttt 41126231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36673897 - 36673959
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||| || |||||||||||||    
T  36673897 tagttaggggaccaaaataaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctt 36673959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 38001559 - 38001512
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  38001559 tagttagaggaccaaaatgaaattcgaaaataagttaagggaccaaag 38001512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 2904108 - 2904169
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||| || ||||||||||||    
T  2904108 tagttaggggaccaaaatgaaatttgaaaataaattaagggaccaaa-gcatgtattaagcct 2904169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 10338375 - 10338436
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  10338375 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctt 10338436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 41127232 - 41127293
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||| ||||||||||| |||||| |||| || ||||||||||||    
T  41127232 tagttaggggaccaaaatgaaatccgaaaataagttaagggatcaaa-gcatgtattaagcct 41127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 21171349 - 21171289
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||||    
T  21171349 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 21171289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 32610872 - 32610917
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||    
T  32610872 agttaagggaccaaaatgaaattcaaaaataagtcaagggaccaaa 32610917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 35480256 - 35480200
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  35480256 gggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagccttt 35480200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38779032 - 38778972
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||| || |||||||||||    
T  38779032 tagttaggggaccaaaatgaaattcaaaaatatgttaagggaccaaa-gcatgtattaagcc 38778972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18668817 - 18668758
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  18668817 agtttggggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 18668758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 32610738 - 32610675
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  32610738 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 32610675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 40501281 - 40501226
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  40501281 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctt 40501226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 43704662 - 43704603
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  43704662 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 43704603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 43705520 - 43705457
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  43705520 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 43705457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 1885309 - 1885363
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  1885309 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 1885363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 33228895 - 33228841
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  33228895 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 33228841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 37373588 - 37373526
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  37373588 agttaaggtaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 37373526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 41618563 - 41618625
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttttc 67  Q
    |||||||||||||||||||| | ||||||||| ||||||||||| || |||||||||| |||||    
T  41618563 ttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagctttttc 41618625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25153713 - 25153667
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||    
T  25153713 tagttaggggaccaaattgaaaatcgaaaataagttaagggaccaaa 25153667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 29754748 - 29754794
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  29754748 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 29754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 37725933 - 37725887
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  37725933 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaag 37725887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 34557452 - 34557392
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||||| |||| ||||||||||| |||| |||||| || |||||||||||    
T  34557452 tagttaggggaccaaaataaaatccgaaaataagttaaggaaccaaa-gcatgtattaagcc 34557392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 18670565 - 18670628
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| ||||||||||| |||| | ||||||||| |||||||||||||  |||||||||||||||    
T  18670565 agttaagggaccaaaataaaatccaaaaataagttaagggaccaaagg-atgtattaagcctttt 18670628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 48755617 - 48755672
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  48755617 ggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagtcttt 48755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 6772775 - 6772721
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||||||||| ||||| ||||||||| ||||||||||| || |||||||||||||    
T  6772775 ggaccaaaatggaattcaaaaataagttaagggaccaaa-gcatgtattaagcctt 6772721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 48
Target Start/End: Original strand, 6773459 - 6773498
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||||| ||||||||| ||||||||||||    
T  6773459 ggaccaaaatgaaattcaaaaataagttaagggaccaaag 6773498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8439814 - 8439760
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||| ||||||||| |||||| |||| || ||||||||||||    
T  8439814 gggaccaaaatgaaattcaaaaataagttaagggatcaaa-gcatgtattaagcct 8439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 10338235 - 10338181
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||| ||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  10338235 gggatcaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 10338181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19848895 - 19848942
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    |||||| |||||||||||||||| | ||||||||| ||||||||||||    
T  19848895 tagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaag 19848942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 40501523 - 40501577
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||| ||||||||| ||||||| ||| || ||||||||||||    
T  40501523 gggaccaaaatgaaattcaaaaataagttaagggactaaa-gcatgtattaagcct 40501577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43935240 - 43935193
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||| ||||||||||||||| | ||||||||| ||||||||||||    
T  43935240 tagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaag 43935193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 47810201 - 47810263
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||| ||||| ||||||||| |||||||||||  | ||||||||||||||    
T  47810201 agttaagggaccaaaatgtaattcaaaaataagttaagggaccaaa-acatgtattaagccttt 47810263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 1884288 - 1884235
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||| |||||| ||||||||| ||||||||||| || |||||||||||    
T  1884288 gggaccaaaataaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 1884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 7345962 - 7345909
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||||||||||||| | ||||||||| ||||||||||| || |||||||||||    
T  7345962 gggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 7345909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21171548 - 21171594
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| |||||| | ||||||||| ||||||||||||    
T  21171548 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaag 21171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 37375156 - 37375202
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  37375156 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaag 37375202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 43930374 - 43930328
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| || ||||||||| |||||||||||    
T  43930374 tagttaggggaccaaagtgaaaatcaaaaataagttaagggaccaaa 43930328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43936201 - 43936247
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||| ||||||||||||||| | ||||||||| |||||||||||    
T  43936201 tagttagaggaccaaaatgaaatccaaaaataagttaagggaccaaa 43936247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 3699809 - 3699854
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||||    
T  3699809 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaa 3699854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 8439954 - 8439999
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||||    
T  8439954 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaa 8439999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38002575 - 38002635
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||| ||||||||||||||||  |||||||||| ||| ||||||| || |||||||||||    
T  38002575 tagttaagggaccaaaatgaaatctgaaaataagttaagagaccaaa-gcatgtattaagcc 38002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 43705604 - 43705649
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  43705604 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa 43705649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 47809544 - 47809484
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| || ||||||||||||||| ||||||| | ||||||||||| || ||||||||||||    
T  47809544 agttaaggaaccaaaatgaaattcaaaaataaattaagggaccaaa-gcatgtattaagcct 47809484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1904082 - 1904145
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||| ||||||| |||||| | ||||||||| ||||||||||| || |||||||| ||||||    
T  1904082 agttaggagaccaaattgaaatccaaaaataagttaagggaccaaa-gcatgtattaaacctttt 1904145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 36702831 - 36702772
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| ||||||||||||||||   ||||||||| ||||||||||| || |||||||||||    
T  36702831 agttaagggaccaaaatgaaatctaaaaataagttaagggaccaaa-gcatgtattaagcc 36702772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 1807 - 1748
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||||||    
T  1807 ttaggggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcctt 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3665279 - 3665218
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  3665279 tagttagaggaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 3665218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5564107 - 5564050
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||||    
T  5564107 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctttt 5564050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 6706981 - 6706920
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||    
T  6706981 tagttaggggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 6706920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41313328 - 41313374
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||    
T  41313328 tagttaggggaccaaaataaaattcgaaaataagttaagggaccaaa 41313374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 43015593 - 43015532
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  43015593 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctt 43015532  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 17179313 - 17179372
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || |||||||||||    
T  17179313 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 17179372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 17859329 - 17859388
Alignment:
Q  3 gttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  17859329 gttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 17859388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 30202747 - 30202684
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||| |||||    
T  30202747 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaagtctttt 30202684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 3254908 - 3254850
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| || ||||||||||||    
T  3254908 ttagggaaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcct 3254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 5565213 - 5565267
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  5565213 gggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 5565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 17179114 - 17179052
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||| | |||||| ||||||||| ||||||||||| || ||||||||||||||    
T  17179114 agttaggggaccaaattaaaattcaaaaataagttaagggaccaaa-gcatgtattaagccttt 17179052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 3255939 - 3255981
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggac 43  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  3255939 tagttaggggaccaaaatgaaatccgaaaataagttaagggac 3255981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3666329 - 3666375
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||    
T  3666329 tagttatgggaccaaaatgaaatccgaaaataagttaagggaccaaa 3666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 27262767 - 27262706
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||| || |||||||||||||    
T  27262767 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcctt 27262706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27264635 - 27264696
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||| ||||||||| ||| ||||||| || |||||||||||||    
T  27264635 agttaagggaccaaaatgaaattcaaaaataagttaagagaccaaa-gcatgtattaagcctt 27264696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33836824 - 33836778
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||||    
T  33836824 tagttaggggaccaaaatgaaatccgaaaataagttaaggaaccaaa 33836778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12852941 - 12852881
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| | ||| ||||| ||||||||||| || |||||||||||    
T  12852941 tagttaggggaccaaaatgaaatccaaaagtaagttaagggaccaaa-gcatgtattaagcc 12852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 14482153 - 14482213
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| || ||||||||||||||| ||||||||| ||||||||||| || ||||||||||||    
T  14482153 agttaaggaaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 14482213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14573869 - 14573929
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||| || |||||||||||    
T  14573869 tagttaggggaccaaaatgaaatccaaaaatatgttaagggaccaaa-gcatgtattaagcc 14573929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 2306723 - 2306781
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||||||||||||||||| || ||||||||| ||||||||||| || |||||||||||    
T  2306723 agttaggggaccaaaatgaaa-tccaaaataagttaagggaccaaa-gcatgtattaagcc 2306781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 4630145 - 4630187
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggac 43  Q
    |||||||||||||||||||||||  |||||||||| |||||||    
T  4630145 tagttaggggaccaaaatgaaatctgaaaataagttaagggac 4630187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 5435213 - 5435167
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| || |||||| ||||||||||||    
T  5435213 agttaagggaccaaaatgaaattcaaatataagttaagggaccaaag 5435167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7038393 - 7038439
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  7038393 tagttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 7038439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 21541115 - 21541054
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||| | ||||| ||| ||||||||||| || |||||||||||||    
T  21541115 agttaagggaccaaaatgaaatccaaaaattagttaagggaccaaa-gcatgtattaagcctt 21541054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33837816 - 33837862
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||||    
T  33837816 tagttaggggaccaaaataaaatctgaaaataagttaagggaccaaa 33837862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41312555 - 41312494
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||| ||| ||||||||||| ||||||||||| || |||||||| || ||||||||||||    
T  41312555 tagttagaggaacaaaatgaaatccgaaaataagttaatggaccaaa-gcatgtattaagcct 41312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42027248 - 42027202
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||| |||||||||||||| || ||||||||| |||||||||||    
T  42027248 tagttagaggaccaaaatgaaaatcaaaaataagttaagggaccaaa 42027202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42596615 - 42596569
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||||| |||  ||||||||||| |||||||||||    
T  42596615 tagttaggggaccaaaataaaaaacgaaaataagttaagggaccaaa 42596569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 12854165 - 12854225
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    |||||| ||||||||||||||||   ||||||||| ||||||||||| || |||||||||||    
T  12854165 tagttaagggaccaaaatgaaatctaaaaataagttaagggaccaaa-gcatgtattaagcc 12854225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 15808134 - 15808089
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| ||||| |||||||||||| ||||||||| |||||||||||    
T  15808134 agttaagggactaaaatgaaattcaaaaataagttaagggaccaaa 15808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 17858512 - 17858452
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||||||||| ||||||| ||||||| | ||||||||||| || ||||||||||||    
T  17858512 agttaagggaccaaaacgaaattcaaaaataaattaagggaccaaa-gcatgtattaagcct 17858452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 17858646 - 17858691
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  17858646 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa 17858691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 21545131 - 21545176
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||| | ||||||||| |||||||||||    
T  21545131 agttaagggaccaaaatgaaatccaaaaataagttaagggaccaaa 21545176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 30202945 - 30202990
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||||||| |||||| | ||||||||| |||||||||||    
T  30202945 agttaggggaccaaattgaaatccaaaaataagttaagggaccaaa 30202990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2305595 - 2305536
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagc 61  Q
    ||||||||||| ||||||||||| | ||||||||| |||||| |||| || ||||||||||    
T  2305595 tagttaggggatcaaaatgaaatccaaaaataagttaagggatcaaa-gcatgtattaagc 2305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 41178732 - 41178792
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| || ||||||||||||    
T  41178732 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcct 41178792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 3271214 - 3271155
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  3271214 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 3271155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 21551976 - 21551917
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  21551976 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 21551917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 21553022 - 21552963
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||| || |||||||||||    
T  21553022 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcc 21552963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24068385 - 24068322
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||| || ||||||||||||||    
T  24068385 tagttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaa-gcatgtattaagccttt 24068322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 6844636 - 6844694
Alignment:
Q  3 gttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||| || |||||||||||    
T  6844636 gttagggaaccaaaatgaaatccgaaaataagttaagggaccaaa-gcatgtattaagcc 6844694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 40102268 - 40102214
Alignment:
Q  9 ggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||||||||||||||| ||||||||| ||||||||||| || |||||||||||||    
T  40102268 ggaccaaaatgaaattcaaaaataagttaagggaccaaa-gcatgtattaagcctt 40102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 8502336 - 8502382
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||    
T  8502336 agttaggggaccaaattgaaattcaaaaataagttaagggaccaaag 8502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 15989058 - 15988997
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    ||||| |||||||||||||||||  ||||||||| ||||||||||| || |||||||||||||    
T  15989058 agttaagggaccaaaatgaaatttaaaaataagttaagggaccaaa-gcatgtattaagcctt 15988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6843810 - 6843746
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||||| |||| ||||||||||| |||||| |||| || |||||||| ||||||    
T  6843810 tagttaggggaccaaaataaaatccgaaaataagttaagggatcaaa-gcatgtattaaacctttt 6843746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 15989198 - 15989153
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  15989198 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 15989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 39349501 - 39349546
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||||    
T  39349501 agttaagggaccaaaatgaaattcaaaaataagttaagggaccaaa 39349546  T

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Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 5979695 - 5979643
Alignment:
Q  286 tgttaactttatgtttatttggagtaaaaagacattgattgagatagacaaag 338  Q
    ||||| ||||||||| ||||||||| ||||||||| ||||||||||| |||||    
T  5979695 tgttagctttatgttgatttggagttaaaagacatcgattgagatagccaaag 5979643  T

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Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19913547 - 19913499
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaagg 49  Q
    ||||||| |||||||| |||||||| ||||||||| |||||||||||||    
T  19913547 tagttagaggaccaaattgaaattcaaaaataagttaagggaccaaagg 19913499  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 30865187 - 30865250
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||| || | |||||||||||||    
T  30865187 agttaagggaccaaaatgaaattcaaaaataagttaaaggaccaaa-gcatatattaagcctttt 30865250  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 45385862 - 45385916
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    |||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||    
T  45385862 gggaccaaaatgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcct 45385916  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 3271946 - 3271889
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||| ||||||||||||| ||||||||| |||||||||||  | |||||||||||||||    
T  3271946 gggatcaaaatgaaattcaaaaataagttaagggaccaaa-tcatgtattaagcctttt 3271889  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 3272087 - 3272129
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggacc 44  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||    
T  3272087 agttaagggaccaaaatgaaattcaaaaataagttaagggacc 3272129  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 21553770 - 21553816
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| |||||||||  |||||||||||    
T  21553770 agttatgggaccaaaatgaaattcaaaaataagttgagggaccaaag 21553816  T

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Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 30864523 - 30864580
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||| ||||||||||||| ||||||||| |||||||||||  | |||||||||||||||    
T  30864523 gggatcaaaatgaaattcaaaaataagttaagggaccaaa-tcatgtattaagcctttt 30864580  T

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Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38591068 - 38591114
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| || ||||||||| |||||||||||    
T  38591068 tagttaggggaccaaattgaaaatcaaaaataagttaagggaccaaa 38591114  T

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Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 40103000 - 40103046
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| ||||| |||||||||||| ||||||||| ||||||||||||    
T  40103000 agttaagggactaaaatgaaattcaaaaataagttaagggaccaaag 40103046  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 3237702 - 3237747
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||||||||| |||||||||| | ||||||||| |||||||||||    
T  3237702 agttaggggactaaaatgaaatccaaaaataagttaagggaccaaa 3237747  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 4675940 - 4676000
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| ||||||||||| |||||| |||||||||  |||||||||| || ||||||||||||    
T  4675940 agttaagggaccaaaataaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 4676000  T

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Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 15989332 - 15989377
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||||||||| ||||||| ||||||||| |||||||||||    
T  15989332 agttaagggaccaaaacgaaattcaaaaataagttaagggaccaaa 15989377  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 29441670 - 29441610
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| ||||||||||| |||||| ||||||||| ||| ||||||| || ||||||||||||    
T  29441670 agttaagggaccaaaataaaattcaaaaataagttaagagaccaaa-gcatgtattaagcct 29441610  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37274942 - 37274881
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||||| ||||||||||||||| | ||||||||| || | |||||| || |||||||||||    
T  37274942 tagttagaggaccaaaatgaaatccaaaaataagttaaagaaccaaaagcatgtattaagcc 37274881  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 3612241 - 3612296
Alignment:
Q  10 gaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||||||||||||||| |||||||||  |||||| ||| || |||||||||||||||    
T  3612241 gaccaaaatgaaattcaaaaataagttgagggactaaa-gcatgtattaagcctttt 3612296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 7561853 - 7561794
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcc 62  Q
    ||||| ||||||||| |||||| | ||||||||| ||||||||||| || |||||||||||    
T  7561853 agttaagggaccaaattgaaatccaaaaataagttaagggaccaaa-gcatgtattaagcc 7561794  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 14433676 - 14433613
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    ||||||||||||||| |||||||| ||||||| | || |||||||| || |||||||| ||||||    
T  14433676 agttaggggaccaaattgaaattcaaaaataaattaaaggaccaaa-gcatgtattaaacctttt 14433613  T

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Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 2329 - 2389
Alignment:
Q  4 ttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    |||||||||||||||||||  | ||||||||| ||||||||||| || ||||||||||||||    
T  2329 ttaggggaccaaaatgaaaaccaaaaataagttaagggaccaaa-gcatgtattaagccttt 2389  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5224 - 5162
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctt 64  Q
    |||||||||||||||||  |||| | ||||||||| ||||||||||| || |||||||||||||    
T  5224 tagttaggggaccaaaagaaaatccaaaaataagttaagggaccaaa-gcatgtattaagcctt 5162  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 28186 - 28124
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagccttt 65  Q
    ||||| |||||||||||||||||| |||||||||  ||||||||||  | ||||||||||||||    
T  28186 agttaagggaccaaaatgaaattcaaaaataagttgagggaccaaa-acatgtattaagccttt 28124  T

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Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 28320 - 28380
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcct 63  Q
    ||||| |||| ||||||||||||| |||||||||  |||||||||| || ||||||||||||    
T  28320 agttaagggatcaaaatgaaattcaaaaataagttgagggaccaaa-gcatgtattaagcct 28380  T

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Target: scaffold0839 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 73 - 16
Alignment:
Q  8 gggaccaaaatgaaattcgaaaataagtcaagggaccaaaggcttgtattaagcctttt 66  Q
    |||| ||||||||||||| ||||||||| |||||||||||  | |||||||||||||||    
T  73 gggatcaaaatgaaattcaaaaataagttaagggaccaaa-tcatgtattaagcctttt 16  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 2064 - 2018
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| ||||||||||||||||   ||||||||||||||||||||||    
T  2064 agttaagggaccaaaatgaaatctaaaaataagtcaagggaccaaag 2018  T

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Target: scaffold0630; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3114 - 3160
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaag 48  Q
    ||||| |||||||||||||||||| ||||||||| || |||||||||    
T  3114 agttaagggaccaaaatgaaattcaaaaataagttaaaggaccaaag 3160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 96215 - 96169
Alignment:
Q  1 tagttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    |||||||||||||||| ||||| |||||||||||| || ||||||||    
T  96215 tagttaggggaccaaattgaaaatcgaaaataagttaatggaccaaa 96169  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 47124 - 47079
Alignment:
Q  2 agttaggggaccaaaatgaaattcgaaaataagtcaagggaccaaa 47  Q
    ||||| |||| ||||||||||||| ||||||||| |||||||||||    
T  47124 agttaagggatcaaaatgaaattcaaaaataagttaagggaccaaa 47079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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