View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12501_low_30 (Length: 203)

Name: NF12501_low_30
Description: NF12501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12501_low_30
NF12501_low_30
[»] chr1 (5 HSPs)
chr1 (17-182)||(22085612-22085777)
chr1 (25-177)||(41369420-41369572)
chr1 (41-182)||(22795251-22795395)
chr1 (115-180)||(21309917-21309982)
chr1 (119-180)||(22685572-22685633)
[»] scaffold0101 (2 HSPs)
scaffold0101 (17-182)||(47026-47191)
scaffold0101 (17-180)||(51664-51827)
[»] scaffold0270 (1 HSPs)
scaffold0270 (41-190)||(15981-16130)
[»] chr4 (3 HSPs)
chr4 (41-190)||(14557659-14557808)
chr4 (41-182)||(13277996-13278137)
chr4 (41-182)||(14714906-14715050)
[»] scaffold0051 (1 HSPs)
scaffold0051 (11-182)||(79009-79180)
[»] chr6 (2 HSPs)
chr6 (11-182)||(23495769-23495940)
chr6 (41-182)||(19026155-19026299)
[»] chr2 (5 HSPs)
chr2 (11-182)||(22647770-22647941)
chr2 (41-190)||(23615900-23616049)
chr2 (41-182)||(23612244-23612385)
chr2 (84-182)||(23191370-23191468)
chr2 (118-190)||(23617020-23617092)
[»] scaffold0323 (1 HSPs)
scaffold0323 (11-182)||(3743-3914)
[»] scaffold0304 (1 HSPs)
scaffold0304 (41-182)||(6555-6696)
[»] scaffold1701 (1 HSPs)
scaffold1701 (45-182)||(1164-1301)
[»] scaffold0040 (1 HSPs)
scaffold0040 (41-182)||(40551-40692)
[»] scaffold0108 (1 HSPs)
scaffold0108 (41-182)||(43423-43564)
[»] chr7 (4 HSPs)
chr7 (45-182)||(14324501-14324638)
chr7 (143-182)||(13347359-13347398)
chr7 (138-180)||(10828767-10828809)
chr7 (138-180)||(11022559-11022601)
[»] chr8 (2 HSPs)
chr8 (25-177)||(1734527-1734679)
chr8 (41-182)||(22334177-22334321)
[»] chr3 (6 HSPs)
chr3 (54-182)||(14683946-14684074)
chr3 (45-182)||(7342252-7342389)
chr3 (41-182)||(10170355-10170496)
chr3 (54-177)||(10791720-10791843)
chr3 (119-182)||(12022395-12022458)
chr3 (119-182)||(12845530-12845593)
[»] scaffold0022 (1 HSPs)
scaffold0022 (41-182)||(57715-57856)
[»] scaffold0023 (2 HSPs)
scaffold0023 (41-182)||(84257-84401)
scaffold0023 (122-182)||(21842-21902)
[»] chr5 (1 HSPs)
chr5 (41-182)||(21529525-21529669)
[»] scaffold0241 (1 HSPs)
scaffold0241 (101-190)||(24298-24387)
[»] scaffold0081 (2 HSPs)
scaffold0081 (114-182)||(45074-45142)
scaffold0081 (41-92)||(45022-45073)
[»] scaffold0193 (2 HSPs)
scaffold0193 (114-182)||(27589-27657)
scaffold0193 (41-92)||(27537-27588)
[»] scaffold0239 (1 HSPs)
scaffold0239 (119-189)||(17927-17997)
[»] scaffold0156 (1 HSPs)
scaffold0156 (110-180)||(19154-19224)
[»] scaffold0001 (2 HSPs)
scaffold0001 (122-182)||(389308-389368)
scaffold0001 (109-182)||(116176-116249)
[»] scaffold0130 (1 HSPs)
scaffold0130 (115-182)||(30176-30243)
[»] scaffold0100 (1 HSPs)
scaffold0100 (115-182)||(8496-8563)
[»] scaffold0107 (1 HSPs)
scaffold0107 (122-182)||(28372-28432)
[»] scaffold0059 (1 HSPs)
scaffold0059 (115-177)||(71694-71756)
[»] scaffold0026 (1 HSPs)
scaffold0026 (25-190)||(119049-119217)
[»] scaffold0019 (1 HSPs)
scaffold0019 (122-182)||(152251-152311)
[»] scaffold0013 (2 HSPs)
scaffold0013 (115-182)||(119045-119112)
scaffold0013 (115-182)||(126889-126956)


Alignment Details
Target: chr1 (Bit Score: 130; Significance: 1e-67; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 22085777 - 22085612
Alignment:
Q  17 actgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctc 116  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  22085777 actgaaacaaaaatttgaatctccatgactcgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctc 22085678  T
Q  117 aatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22085677 agtttatggaagaaccagatgtcaaagaagctgaagacaaaatctggaaatcccaggtaatcatct 22085612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 177
Target Start/End: Original strand, 41369420 - 41369572
Alignment:
Q  25 aaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatg 124  Q
    |||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||| ||||||    
T  41369420 aaaaatttgaatctttatggcgcgcgtagaaggttcttcttctcaaccaacgaaacaacatgaaacaaatgccaatcttcccataaatactcagtttatg 41369519  T
Q  125 gaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaat 177  Q
    ||||||||||| || ||||||||| |||||| |||||||||||||||||||||    
T  41369520 gaagaaccagacgttaaagaagctgaagacagaatctggaaatcccaggtaat 41369572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 22795251 - 22795395
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgc---caatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||||||||||  ||||||||||||||||  |||| |||||  |||||||||  |    ||| |||| |  ||||| |||||| ||||||||||| |||     
T  22795251 atgacgcgcgctgaaggttcttcttctcagtcaacaaaacatcatgaaccaaccgatctcaaccttcgcggaaatcttcaattcatggaagaaccggata 22795350  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  22795351 tcaaagaagctgaagataaaatctggaaatcccaggtaattatct 22795395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 21309982 - 21309917
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    ||||||||||||||| |||||| |||| |||||| |||| ||||||| ||||||| ||||||||||    
T  21309982 tcaatttatggaagagccagatatcaaggaagctgaagataaaatctagaaatcctaggtaatcat 21309917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 22685572 - 22685633
Alignment:
Q  119 tttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    |||||||||||  ||||  |||| |||||| |||| ||||||||||||||||||||||||||    
T  22685572 tttatggaagagtcagacatcaaggaagctgaagataaaatctggaaatcccaggtaatcat 22685633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 126; Significance: 3e-65; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 126; E-Value: 3e-65
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 47026 - 47191
Alignment:
Q  17 actgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctc 116  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  47026 actgaaacaaaaatttgaatctccatgacacgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctc 47125  T
Q  117 aatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  47126 agtttatggaagaaccagatgtcaaagaagatgaagacaaaatctggaaatcccaggtaatcatct 47191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 51664 - 51827
Alignment:
Q  17 actgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctc 116  Q
    ||||||| ||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  51664 actgaaacaaaaatttgaatctccatgacacgcgcagaaggttcctcttctcaaccaacgaaacaacatgaaccaagtgccaattttcccataaatcctc 51763  T
Q  117 aatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    | |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  51764 agtttatggaagaaccagatgtcaaagaagatgaagacaaaatctggaaatcccaggtaatcat 51827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 15981 - 16130
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||| ||||||||||||||||| ||||||||||| ||||||||| || |||||||||| ||||| ||||||||||||||||||| ||||| |    
T  15981 atgacgcgcgcagaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccgtaaattctcaatttatggaagaaccggatgtta 16080  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
     ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  16081 gagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgtcca 16130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 7e-51; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 14557659 - 14557808
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  ||||||||||||||||| ||||||||||| ||||| | | || |||||||||| ||||| |||||||||||||||||||||||||||    
T  14557659 atgacgcgcgcggaaggttcttcttctcaatcaacgaaacaacatgaaacgaatgtcaatcttcccgtaaattctcaatttatggaagaaccagatgtca 14557758  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  14557759 aagaagctgaagacaaaatctggaaatcccaggtaatcatctcatgtcca 14557808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 13277996 - 13278137
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  |||||||||||||| |  |||| |||||  ||||||||| || ||||||||| | |||||||||||||||||||||||||||||| |    
T  13277996 atgacgcgcgctgaaggttcttcttcttattcaacaaaacagcatgaaccaaatgtcaatcttccaaaaaatcctcaatttatggaagaaccagatgtaa 13278095  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  13278096 aagaagctgaagacaaaatctggaaatcccaggtaatcatct 13278137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 14714906 - 14715050
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgcc---aatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||||||||||  ||||||||||||||||  ||||||||||  ||||||| | ||     || |||| |  ||||| |||||| ||||||||||| |||     
T  14714906 atgacgcgcgctgaaggttcttcttctcagtcaacgaaacatcatgaaccgactgatcttaaccttcgcggaaatcttcaattcatggaagaaccggata 14715005  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  14715006 tcaaagaagctgaagataaaatctggaaatcccaggtaattatct 14715050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 79180 - 79009
Alignment:
Q  11 tcgttcactgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataa 110  Q
    ||||||| ||||  ||||||||| ||||| |||||||||||  |||||||||| |||||| ||||||||||| ||||||||| ||  ||||||||  |||    
T  79180 tcgttcattgaaccaaaaatttgtatctccatgacgcgcgctgaaggttcttcctctcaatcaacgaaacaagatgaaccaaatgttaatcttcctgtaa 79081  T
Q  111 atcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  79080 atcctcagtttatggaagaaccagatatcaaagaagctgaagacaaaatctggaaatcccaggtaatcatct 79009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 23495940 - 23495769
Alignment:
Q  11 tcgttcactgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataa 110  Q
    ||||||| ||||  ||||||||| | ||| |||||||||||  ||||||||||||||||| |||| |||||| ||||||||| || ||||||||||||||    
T  23495940 tcgttcattgaaccaaaaatttgtaactccatgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaaatgtcaatcttcccataa 23495841  T
Q  111 atcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||| |||||||||||||| ||| ||||||||| | |||||||||||||||||||||||||||||||||    
T  23495840 atcctcagtttatggaagaaccggatatcaaagaagatgaagacaaaatctggaaatcccaggtaatcatct 23495769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 19026155 - 19026299
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagt---gccaatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||| ||||||  ||||||||||||||||| |||| |||||  ||||||||| |   | ||||||||||| ||||||| |||||||||||||| | |||     
T  19026155 atgatgcgcgctgaaggttcttcttctcaatcaacaaaacagcatgaaccaactaatgtcaatcttcccaaaaatcctaaatttatggaagaatcggata 19026254  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  19026255 tcaaagaagctgaagacaaaatctggaaatcccaggtaatcatct 19026299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 22647941 - 22647770
Alignment:
Q  11 tcgttcactgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataa 110  Q
    ||||||| ||||  ||||||| | | ||| |||||||||||  ||||||||||||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  22647941 tcgttcattgaaccaaaaattcgtaactccatgacgcgcgctgaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccataa 22647842  T
Q  111 atcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||| |||||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  22647841 atcctcagtttatggaagaaccggatatcaaagaagctgaagacaaaatatggaaatcccaggtaatcatct 22647770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 41 - 190
Target Start/End: Original strand, 23615900 - 23616049
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  ||||||||||||||||| |||| |||||| ||||| ||| || |||||||| ||||||||||||||||||||||||||| | | |||    
T  23615900 atgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaacaaatgtcaatcttctcataaatcctcaatttatggaagaaccgggtctca 23615999  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  23616000 aagaagctgaagacaaaatctggaaatcccaggtaatcatttcatgtcca 23616049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 23612244 - 23612385
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  ||||||||||||||||| |||| ||| |  ||||||||| |  ||||||||||||||||||||| |||||||||||||| ||| |||    
T  23612244 atgacgcgcgctgaaggttcttcttctcaatcaactaaatatcatgaaccaaatttcaatcttcccataaatcctcagtttatggaagaaccggatatca 23612343  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  23612344 aagaagctgaagacaaaatctggaaatcctaggtaatcatct 23612385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 23191370 - 23191468
Alignment:
Q  84 atgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||| |  |||||||||| ||| |||||| |||| ||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||||||||    
T  23191370 atgaaccaaatatcaatcttcccgtaagtcctcagtttagggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcctaggtaatcatct 23191468  T

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Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 23617020 - 23617092
Alignment:
Q  118 atttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
    ||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||| | |||||||    
T  23617020 atttatggaagaaccgggtctcaaagaagctgaagacaaaatctggaaatcccaggtaatcatttcatgtcca 23617092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 3914 - 3743
Alignment:
Q  11 tcgttcactgaaagaaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataa 110  Q
    ||||||| ||||  ||||||| | | ||| |||||||||||| |||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||||    
T  3914 tcgttcattgaaccaaaaattcgtaactccatgacgcgcgcagaaggttattcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccataa 3815  T
Q  111 atcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| |||||||||    
T  3814 atcctcagtttatggaagaaccatatatcaaagaagctgaagacaaaatctggaaatctcagctaatcatct 3743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 94; Significance: 4e-46; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 6555 - 6696
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    ||||||||||   ||||||||||||||||| ||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||||  ||| |||    
T  6555 atgacgcgcggtgaaggttcttcttctcaatcaacgaaacaacatgaaccaaatgtcaatcttcccgtaaatcctcaatttatggaagaacaggatatca 6654  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  6655 aagaagctgaagacaaaatctggaaatcccaggtaatcatct 6696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1701 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1701
Description:

Target: scaffold1701; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 45 - 182
Target Start/End: Complemental strand, 1301 - 1164
Alignment:
Q  45 cgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaaga 144  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||||| || |||||| ||||||||| |||| ||||||||||||||||| ||||  ||    
T  1301 cgcgcgtagaaggttcttcttctcaaccaacgaaacaacatgaaccaaatgtcaatctccccataaatactcagtttatggaagaaccagacgtcaggga 1202  T
Q  145 agcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  1201 agctgaagacagaatctggaaatcccaggtaatcatct 1164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 40692 - 40551
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  ||||||||||||||||| |||| |||||| |||||||||  | ||| |||||||||||||||||||||||||||||||| ||||| |    
T  40692 atgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaaacgtcaaacttcccataaatcctcaatttatggaagaaccggatgtta 40593  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||| ||||||||||||||||| ||||    
T  40592 aagaagctgaagacaaaatatggaaatcccaggtaattatct 40551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 43564 - 43423
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  |||||||||| |||||| ||||||||||| ||||||| | || ||||||||||||||| ||||| ||||| |||||||  ||| |||    
T  43564 atgacgcgcgctgaaggttcttcctctcaatcaacgaaacaacatgaacccaatgtcaatcttcccataaaccctcagtttattgaagaactggatatca 43465  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  43464 aagaagctgaagacaaaatctggaaatcccaggtaatcatct 43423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 6e-39; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 14324501 - 14324638
Alignment:
Q  45 cgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaaga 144  Q
    |||||| | |||||||||||||||||||||| |||||| ||||||||| || |||||| ||||||||| |||| ||||||||||||||||| ||||  ||    
T  14324501 cgcgcgtagaaggttcttcttctcaaccaacaaaacaacatgaaccaaatgtcaatctccccataaatactcagtttatggaagaaccagacgtcaggga 14324600  T
Q  145 agcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  14324601 agctgaagacaaaatatggaaatcccaggtaatcatct 14324638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 182
Target Start/End: Original strand, 13347359 - 13347398
Alignment:
Q  143 gaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  13347359 gaagctgaagataaaatctggaaatcccaggtaatcatct 13347398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 10828767 - 10828809
Alignment:
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    ||||||||||| | || ||||||||||||||||||||||||||    
T  10828767 tcaaagaagctgatgataaaatctggaaatcccaggtaatcat 10828809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 180
Target Start/End: Original strand, 11022559 - 11022601
Alignment:
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    ||||||||||| | || ||||||||||||||||||||||||||    
T  11022559 tcaaagaagctgatgataaaatctggaaatcccaggtaatcat 11022601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 2e-38; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 25 - 177
Target Start/End: Complemental strand, 1734679 - 1734527
Alignment:
Q  25 aaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatg 124  Q
    |||||||||||| | |||  |||||| | ||||||| ||||||||||||| ||||||| ||||| ||| |||||||||| |||||||| |||| ||||||    
T  1734679 aaaaatttgaatttttatcgcgcgcgtagaaggttcgtcttctcaaccaatgaaacaacatgaaacaaatgccaatctttccataaatactcagtttatg 1734580  T
Q  125 gaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaat 177  Q
    ||||||||||| || ||||||||| |||||| |||||||||||||||||||||    
T  1734579 gaagaaccagacgttaaagaagctgaagacagaatctggaaatcccaggtaat 1734527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 22334177 - 22334321
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgc---caatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||||||||||  ||||||||||||||||  |||| |||||  ||||||||| ||    ||| |||| || ||||| |||||||||||||||||| |||     
T  22334177 atgacgcgcgctgaaggttcttcttctcagtcaacaaaacatcatgaaccaactgatctcaaccttcacagaaatcttcaatttatggaagaaccggata 22334276  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  22334277 tcaaagaagctgaagacaaaatctggaaatcccagataattatct 22334321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 2e-38; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 14683946 - 14684074
Alignment:
Q  54 aaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaagaagcttaaga 153  Q
    ||||||||||||||||||||||||||||| | ||||||| || |||||||||| ||||| |||| || |||||||||||||| |||| ||||||| ||||    
T  14683946 aaggttcttcttctcaaccaacgaaacaacacgaaccaaatgtcaatcttcccgtaaatactcagttcatggaagaaccagacgtcagagaagctgaaga 14684045  T
Q  154 caaaatctggaaatcccaggtaatcatct 182  Q
    || ||||||||||||||||||||||||||    
T  14684046 cagaatctggaaatcccaggtaatcatct 14684074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 45 - 182
Target Start/End: Original strand, 7342252 - 7342389
Alignment:
Q  45 cgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaaga 144  Q
    |||||| | |||| |||||||||||||||||||||||| ||||||||| || |||||| |||| |||| |||| ||||||||||||||||| || |||||    
T  7342252 cgcgcgtagaaggctcttcttctcaaccaacgaaacaacatgaaccaaatgtcaatctccccaaaaatactcagtttatggaagaaccagacgttaaaga 7342351  T
Q  145 agcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||| | |||||||||||||||||||| ||||||||||    
T  7342352 agctgaggacaaaatctggaaatcccatgtaatcatct 7342389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 10170496 - 10170355
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||| ||||  ||||||||||||||||| |||| |||||  ||||||||| || |||||||| |  |||||||||||||||||||||||| ||||| |    
T  10170496 atgacgtgcgctgaaggttcttcttctcaatcaacaaaacagcatgaaccaaatgtcaatcttctcggaaatcctcaatttatggaagaaccggatgtta 10170397  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  10170396 aagaagctgaagacaaaatatggaaatcccaggtaatcatct 10170355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 10791843 - 10791720
Alignment:
Q  54 aaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtcaaagaagcttaaga 153  Q
    ||||||||||||||||| ||| ||| ||| | ||| ||| |||||||||| |||||||| |||| ||||||||||||||||| |||||||||||| ||||    
T  10791843 aaggttcttcttctcaatcaatgaagcaacaagaaacaaatgccaatctttccataaatactcagtttatggaagaaccagacgtcaaagaagctaaaga 10791744  T
Q  154 caaaatctggaaatcccaggtaat 177  Q
    || |||||||||||||||||||||    
T  10791743 cagaatctggaaatcccaggtaat 10791720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 12022395 - 12022458
Alignment:
Q  119 tttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||| ||||||||||||||||| |||||  |||| ||||||| ||||||||||||||||||||    
T  12022395 tttattgaagaaccagatgtcaaggaagcggaagataaaatctagaaatcccaggtaatcatct 12022458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 12845530 - 12845593
Alignment:
Q  119 tttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||| ||||||||||| ||||  |||||  |||||||||| ||||||||||||||||||||||    
T  12845530 tttatagaagaaccagacgtcagggaagcggaagacaaaatatggaaatcccaggtaatcatct 12845593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 70; Significance: 9e-32; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 57856 - 57715
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgccaatcttcccataaatcctcaatttatggaagaaccagatgtca 140  Q
    |||||||||||  |||| ||||||||| |  |||||||| |  ||||||||| |  ||||||||| | |||||||||||||||||||||||| ||||| |    
T  57856 atgacgcgcgctgaaggctcttcttcttattcaacgaaatagcatgaaccaaatatcaatcttccaaaaaatcctcaatttatggaagaaccggatgtaa 57757  T
Q  141 aagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  57756 aagaagctgaagacaaaatttggaaatcccaggtaatcatct 57715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 84401 - 84257
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgc---caatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||||||| ||  ||||||||||||||||  |||| |||||  ||||||||| ||    ||| |||| || ||||| |||||||||||||||||| |||     
T  84401 atgacgcgtgctgaaggttcttcttctcagtcaacaaaacatcatgaaccaactgatttcaaccttcgcaaaaatcttcaatttatggaagaaccggata 84302  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  84301 tcaaagaagctgaagacaaaatctggaaatcccaggtaattatct 84257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 21902 - 21842
Alignment:
Q  122 atggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||||||||    
T  21902 atggaagaaccagacatcaaagaagctgaagataaaatctggaaatcccaggtaatcatct 21842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 21529669 - 21529525
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtgc---caatcttcccataaatcctcaatttatggaagaaccagatg 137  Q
    |||||||||||  ||||||||||||||||| |||| |||||| ||||||||| ||    ||| |||| |  ||||| |||||||||||||||| | |||     
T  21529669 atgacgcgcgctgaaggttcttcttctcaatcaacaaaacaacatgaaccaactgatatcaaccttcgcggaaatcttcaatttatggaagaatcggata 21529570  T
Q  138 tcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||| || |||||||||||||||||||||||||||| ||||    
T  21529569 tcaaagaaactgaagacaaaatctggaaatcccaggtaattatct 21529525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 24387 - 24298
Alignment:
Q  101 cttcccataaatcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
    |||| |||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||||| |||| |||||||    
T  24387 cttcgcataaatcttcaatttatggaagaaccggatatcaaagaagctgaagacaaaatctggaaatcctaggtaattatctcatgtcca 24298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 45074 - 45142
Alignment:
Q  114 ctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  45074 ctcaatttatggaagaaccggatgtcaaagaagctgaagacaaaatctggaaatcccaggtaattatct 45142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 45022 - 45073
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaa 92  Q
    |||||||||||  ||||||||||||||||| |||| ||||||||||||||||    
T  45022 atgacgcgcgctgaaggttcttcttctcaatcaacaaaacaatatgaaccaa 45073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 27589 - 27657
Alignment:
Q  114 ctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  27589 ctcaatttatggaagaaccggatgtcaatgaagctgaagacaaaatctggaaatcccaggtaattatct 27657  T

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Target: scaffold0193; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 27537 - 27588
Alignment:
Q  41 atgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaa 92  Q
    |||||||||||  ||||||||||||||||| ||| ||||||| |||||||||    
T  27537 atgacgcgcgctgaaggttcttcttctcaatcaatgaaacaacatgaaccaa 27588  T

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Target: scaffold0239 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 17927 - 17997
Alignment:
Q  119 tttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcc 189  Q
    ||||| ||||||||||||||||| |||||  |||| |||||||||||||||||||||||||||| ||||||    
T  17927 tttatagaagaaccagatgtcaaggaagcggaagataaaatctggaaatcccaggtaatcatctcatgtcc 17997  T

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Target: scaffold0156 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 19154 - 19224
Alignment:
Q  110 aatcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcat 180  Q
    |||| |||||| ||||| |||||||||||||| |||||| | || ||||||||||||||||||||||||||    
T  19154 aatcttcaattcatggaggaaccagatgtcaaggaagctgaggaaaaaatctggaaatcccaggtaatcat 19224  T

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Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 389368 - 389308
Alignment:
Q  122 atggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||  ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  389368 atggaagaaccagacatcaaagaagctgaagataaaatctggaaatcccaggtaattatct 389308  T

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Target: scaffold0001; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 116176 - 116249
Alignment:
Q  109 aaatcctcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||| |||| |||| ||||||   ||| |||||||| || |||||||||||||||||||||||||||| ||||    
T  116176 aaatcttcaaattattgaagaaatggatatcaaagaaactgaagacaaaatctggaaatcccaggtaattatct 116249  T

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Target: scaffold0130 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 115 - 182
Target Start/End: Original strand, 30176 - 30243
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||| ||||||||||| ||  ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  30176 tcaattcatggaagaaccggacatcaaagaagctgaagataaaatctggaaatcccaggtaattatct 30243  T

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Target: scaffold0100 (Bit Score: 40; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 8563 - 8496
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||||||||||||||||||  |||| |||||| | || ||||||||||||||||||||||| ||||    
T  8563 tcaatttatggaagaaccagacatcaaggaagctgaggataaaatctggaaatcccaggtaattatct 8496  T

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Target: scaffold0107 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 28432 - 28372
Alignment:
Q  122 atggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||  ||||||||| | |||| ||||||||||||||||||||||| ||||    
T  28432 atggaagaaccagacatcaaagaaggtgaagataaaatctggaaatcccaggtaattatct 28372  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 177
Target Start/End: Original strand, 71694 - 71756
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaat 177  Q
    |||||| |||||||||||||| ||| | |||||  |||| |||||||||||||||||||||||    
T  71694 tcaattcatggaagaaccagacgtccaggaagcggaagataaaatctggaaatcccaggtaat 71756  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 190
Target Start/End: Original strand, 119049 - 119217
Alignment:
Q  25 aaaaatttgaatctctatgacgcgcgcataaggttcttcttctcaaccaacgaaacaatatgaaccaagtg---ccaatcttcccataaatcctcaattt 121  Q
    ||||| ||| ||||| || ||||||||  ||||||| ||||||||  |||| |||||  ||||||||| ||   |||| | || |  ||||| ||| ||     
T  119049 aaaaaattgtatctccataacgcgcgctgaaggttcatcttctcagacaacaaaacatcatgaaccaactgatcccaaacctcgcggaaatcttcagttc 119148  T
Q  122 atggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatctgatgtcca 190  Q
    |||||||||   ||| ||||||||||| | || ||||||||||||||||||||||| |||| |||||||    
T  119149 atggaagaattggatatcaaagaagctgaggataaaatctggaaatcccaggtaattatctcatgtcca 119217  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 182
Target Start/End: Original strand, 152251 - 152311
Alignment:
Q  122 atggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    ||||||||||||||  ||||||||||| ||||  |||||||||||||||| ||||| ||||    
T  152251 atggaagaaccagacatcaaagaagctgaagatgaaatctggaaatcccaagtaattatct 152311  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 119112 - 119045
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||| |||||||||||||| || |  |||||  |||| |||||||||| |||||||||||||||||    
T  119112 tcaattcatggaagaaccagacgttagggaagcggaagataaaatctggagatcccaggtaatcatct 119045  T

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Target: scaffold0013; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 182
Target Start/End: Complemental strand, 126956 - 126889
Alignment:
Q  115 tcaatttatggaagaaccagatgtcaaagaagcttaagacaaaatctggaaatcccaggtaatcatct 182  Q
    |||||| |||||||||| ||| || |  |||||  |||| ||||||||||||||||||||||||||||    
T  126956 tcaattcatggaagaactagacgttagggaagcggaagataaaatctggaaatcccaggtaatcatct 126889  T

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