View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12502_high_8 (Length: 244)

Name: NF12502_high_8
Description: NF12502
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12502_high_8
NF12502_high_8
[»] chr8 (28 HSPs)
chr8 (97-213)||(26125858-26125976)
chr8 (1-124)||(26125724-26125855)
chr8 (96-149)||(3097162-3097215)
chr8 (96-149)||(3467633-3467686)
chr8 (96-149)||(44926955-44927008)
chr8 (96-148)||(25697917-25697969)
chr8 (97-148)||(30085596-30085647)
chr8 (96-150)||(22936748-22936802)
chr8 (96-150)||(38114544-38114598)
chr8 (97-146)||(26243225-26243274)
chr8 (96-147)||(36113999-36114050)
chr8 (97-148)||(36121502-36121553)
chr8 (1-62)||(3743860-3743921)
chr8 (96-148)||(35615809-35615861)
chr8 (97-140)||(40742260-40742303)
chr8 (96-150)||(15206796-15206850)
chr8 (96-150)||(28425427-28425481)
chr8 (96-150)||(29023323-29023377)
chr8 (96-150)||(33626989-33627043)
chr8 (96-146)||(42143323-42143373)
chr8 (97-146)||(24897547-24897596)
chr8 (96-147)||(4941739-4941790)
chr8 (96-147)||(27649845-27649896)
chr8 (95-150)||(45147220-45147275)
chr8 (1-62)||(2165913-2165974)
chr8 (96-149)||(3465396-3465449)
chr8 (1-62)||(20148849-20148910)
chr8 (1-62)||(29800900-29800961)
[»] chr6 (16 HSPs)
chr6 (96-150)||(33898960-33899014)
chr6 (96-149)||(13739297-13739350)
chr6 (96-149)||(13744797-13744850)
chr6 (96-146)||(17829957-17830007)
chr6 (96-149)||(6208019-6208072)
chr6 (6-95)||(3213494-3213592)
chr6 (1-62)||(21293627-21293688)
chr6 (96-148)||(29399750-29399802)
chr6 (96-149)||(1312395-1312448)
chr6 (96-148)||(10826183-10826235)
chr6 (111-150)||(16548216-16548255)
chr6 (96-150)||(21254834-21254888)
chr6 (96-150)||(29409206-29409260)
chr6 (96-149)||(15151461-15151514)
chr6 (101-146)||(16442324-16442369)
chr6 (96-132)||(699648-699684)
[»] chr3 (29 HSPs)
chr3 (96-148)||(10853224-10853276)
chr3 (96-148)||(26519756-26519808)
chr3 (96-150)||(50664850-50664904)
chr3 (97-150)||(3348336-3348389)
chr3 (96-142)||(35930830-35930876)
chr3 (96-150)||(44939371-44939425)
chr3 (6-95)||(27748657-27748746)
chr3 (96-145)||(35930880-35930929)
chr3 (96-149)||(55154593-55154646)
chr3 (96-148)||(42318421-42318473)
chr3 (96-150)||(4984673-4984727)
chr3 (96-150)||(10334230-10334284)
chr3 (96-150)||(23496409-23496463)
chr3 (104-149)||(20813245-20813290)
chr3 (96-149)||(31618368-31618421)
chr3 (96-149)||(38125398-38125451)
chr3 (96-149)||(38172263-38172316)
chr3 (96-149)||(48189398-48189451)
chr3 (104-148)||(38340905-38340949)
chr3 (96-146)||(8424689-8424739)
chr3 (96-149)||(15511332-15511385)
chr3 (95-148)||(30809917-30809970)
chr3 (96-152)||(52966762-52966818)
chr3 (56-95)||(36150283-36150322)
chr3 (96-150)||(30811487-30811541)
chr3 (96-146)||(31084284-31084334)
chr3 (96-150)||(42475801-42475855)
chr3 (96-149)||(35425425-35425477)
chr3 (96-148)||(53074994-53075046)
[»] chr5 (27 HSPs)
chr5 (96-149)||(35760295-35760348)
chr5 (96-150)||(8049003-8049057)
chr5 (96-150)||(32030820-32030874)
chr5 (96-149)||(39987920-39987973)
chr5 (96-148)||(3667960-3668012)
chr5 (96-150)||(24045936-24045990)
chr5 (96-149)||(5710339-5710392)
chr5 (97-150)||(7385884-7385937)
chr5 (97-150)||(40885318-40885371)
chr5 (96-148)||(41834998-41835050)
chr5 (96-150)||(32454642-32454697)
chr5 (96-150)||(10058180-10058234)
chr5 (96-150)||(40495310-40495364)
chr5 (96-150)||(40791022-40791076)
chr5 (96-149)||(22482295-22482348)
chr5 (96-149)||(42146413-42146466)
chr5 (96-148)||(33953856-33953908)
chr5 (96-147)||(13253038-13253089)
chr5 (96-149)||(2430250-2430303)
chr5 (96-145)||(7715046-7715095)
chr5 (96-152)||(27021234-27021290)
chr5 (56-95)||(5257148-5257187)
chr5 (56-95)||(41334571-41334610)
chr5 (96-131)||(41740564-41740599)
chr5 (97-147)||(9275439-9275489)
chr5 (96-150)||(35847842-35847896)
chr5 (1-62)||(38470668-38470729)
[»] chr4 (46 HSPs)
chr4 (96-148)||(14072579-14072631)
chr4 (96-150)||(9889290-9889344)
chr4 (96-150)||(28987095-28987149)
chr4 (96-150)||(29149262-29149316)
chr4 (96-149)||(32238015-32238068)
chr4 (97-149)||(46830025-46830077)
chr4 (96-147)||(43781477-43781528)
chr4 (96-150)||(39187811-39187865)
chr4 (96-150)||(54150603-54150657)
chr4 (96-145)||(9893788-9893837)
chr4 (96-148)||(6138577-6138629)
chr4 (97-149)||(19592187-19592239)
chr4 (96-148)||(26426072-26426124)
chr4 (101-149)||(48550299-48550347)
chr4 (96-147)||(39636862-39636913)
chr4 (96-146)||(30842208-30842258)
chr4 (96-149)||(15603437-15603490)
chr4 (96-148)||(26651805-26651857)
chr4 (96-152)||(41866231-41866287)
chr4 (95-150)||(48550397-48550452)
chr4 (96-150)||(14076091-14076145)
chr4 (96-150)||(14564101-14564155)
chr4 (95-149)||(15619675-15619729)
chr4 (96-150)||(16566382-16566436)
chr4 (1-98)||(27893747-27893853)
chr4 (96-149)||(49519807-49519863)
chr4 (96-150)||(51923017-51923071)
chr4 (96-150)||(53532054-53532108)
chr4 (96-150)||(54735606-54735660)
chr4 (104-149)||(26459852-26459897)
chr4 (1-54)||(31680991-31681044)
chr4 (96-145)||(54153121-54153170)
chr4 (96-148)||(25312792-25312844)
chr4 (104-148)||(31520328-31520372)
chr4 (56-95)||(27864717-27864756)
chr4 (96-150)||(43772078-43772132)
chr4 (96-149)||(13167602-13167655)
chr4 (1-62)||(23036069-23036130)
chr4 (1-62)||(23204728-23204789)
chr4 (96-145)||(45779970-45780019)
chr4 (96-149)||(48556630-48556683)
chr4 (96-124)||(48407679-48407707)
chr4 (10-62)||(48463400-48463452)
chr4 (96-156)||(54488682-54488742)
chr4 (96-124)||(55638736-55638764)
chr4 (6-62)||(55966296-55966352)
[»] chr2 (25 HSPs)
chr2 (96-148)||(2213607-2213659)
chr2 (100-150)||(2215357-2215407)
chr2 (96-149)||(36548300-36548353)
chr2 (96-148)||(28127242-28127294)
chr2 (96-150)||(9988454-9988508)
chr2 (96-149)||(1944993-1945046)
chr2 (96-148)||(7472629-7472681)
chr2 (96-147)||(32502086-32502137)
chr2 (96-149)||(8170413-8170466)
chr2 (96-149)||(44619015-44619068)
chr2 (96-147)||(30007509-30007560)
chr2 (96-151)||(31562639-31562694)
chr2 (103-150)||(36312384-36312431)
chr2 (103-149)||(5916196-5916242)
chr2 (96-146)||(34433263-34433313)
chr2 (109-151)||(43436263-43436305)
chr2 (96-145)||(14821263-14821312)
chr2 (96-148)||(2213748-2213800)
chr2 (96-148)||(25747837-25747889)
chr2 (96-148)||(39141425-39141477)
chr2 (95-150)||(27911491-27911546)
chr2 (96-143)||(42515936-42515983)
chr2 (1-51)||(43490362-43490412)
chr2 (96-148)||(31224781-31224833)
chr2 (98-150)||(42089481-42089533)
[»] scaffold0381 (1 HSPs)
scaffold0381 (96-150)||(9202-9256)
[»] chr1 (34 HSPs)
chr1 (96-149)||(1199943-1199996)
chr1 (96-149)||(6166225-6166278)
chr1 (96-149)||(43728835-43728888)
chr1 (96-149)||(50406246-50406299)
chr1 (97-149)||(42850176-42850228)
chr1 (96-147)||(11023289-11023340)
chr1 (96-150)||(10470705-10470759)
chr1 (97-150)||(12247536-12247589)
chr1 (101-150)||(26058362-26058411)
chr1 (96-149)||(50977297-50977350)
chr1 (96-143)||(45710164-45710211)
chr1 (96-159)||(47123502-47123565)
chr1 (96-150)||(13056113-13056167)
chr1 (96-150)||(35569158-35569212)
chr1 (97-150)||(13931739-13931791)
chr1 (96-149)||(20800234-20800287)
chr1 (101-150)||(27801608-27801657)
chr1 (96-149)||(31223490-31223543)
chr1 (96-149)||(48511024-48511077)
chr1 (96-147)||(25230122-25230173)
chr1 (96-150)||(35536187-35536241)
chr1 (1-94)||(37814867-37814969)
chr1 (96-149)||(7826311-7826364)
chr1 (96-153)||(12468328-12468384)
chr1 (96-148)||(6464723-6464775)
chr1 (56-95)||(43570994-43571033)
chr1 (96-146)||(6061258-6061308)
chr1 (96-146)||(36205307-36205357)
chr1 (96-150)||(40352506-40352560)
chr1 (95-148)||(4369776-4369829)
chr1 (96-149)||(34718567-34718620)
chr1 (109-149)||(291704-291744)
chr1 (101-149)||(7765241-7765289)
chr1 (96-132)||(49242956-49242992)
[»] chr7 (26 HSPs)
chr7 (96-150)||(3622402-3622456)
chr7 (96-150)||(10371900-10371954)
chr7 (96-150)||(37639543-37639597)
chr7 (97-150)||(37562684-37562737)
chr7 (96-149)||(48459823-48459876)
chr7 (96-148)||(19097510-19097562)
chr7 (101-148)||(41715775-41715822)
chr7 (96-150)||(39977665-39977719)
chr7 (96-146)||(43631642-43631692)
chr7 (96-149)||(34010452-34010504)
chr7 (96-153)||(34365921-34365978)
chr7 (96-148)||(3342903-3342955)
chr7 (96-153)||(3375603-3375660)
chr7 (101-146)||(39391083-39391128)
chr7 (96-145)||(46541713-46541762)
chr7 (103-149)||(32187060-32187106)
chr7 (96-150)||(34010903-34010957)
chr7 (101-147)||(38230186-38230232)
chr7 (96-146)||(47022032-47022082)
chr7 (96-146)||(47217487-47217537)
chr7 (96-146)||(48134692-48134742)
chr7 (96-145)||(386428-386477)
chr7 (98-147)||(9456219-9456268)
chr7 (103-144)||(12632031-12632072)
chr7 (1-62)||(44326267-44326328)
chr7 (57-89)||(9216455-9216487)
[»] scaffold0369 (1 HSPs)
scaffold0369 (96-149)||(8541-8594)
[»] scaffold0394 (1 HSPs)
scaffold0394 (96-150)||(5785-5839)
[»] scaffold0005 (1 HSPs)
scaffold0005 (96-150)||(253220-253274)
[»] scaffold0983 (1 HSPs)
scaffold0983 (96-148)||(2225-2277)
[»] scaffold0217 (1 HSPs)
scaffold0217 (96-150)||(1982-2036)
[»] scaffold0007 (1 HSPs)
scaffold0007 (96-148)||(29080-29132)


Alignment Details
Target: chr8 (Bit Score: 88; Significance: 2e-42; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 26125858 - 26125976
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacatcaaatttattctttacaatgaaaactaaaaa--taactaacca 194  Q
    |||||||||||||||||||| |||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||   |||||||||    
T  26125858 aaactcaattctatcaaaattaattctcaccaccgctgtaccaaagacacactgcatcaaatttattctttacaatgaaaactaaaaaataaactaacca 26125957  T
Q  195 gaatttgcaaatccatgtc 213  Q
    |||||||||||||||||||    
T  26125958 gaatttgcaaatccatgtc 26125976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 26125724 - 26125855
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggt---------gtattgccacatggggtggtatatatatcacc 91  Q
    |||| |||||||||||||| || ||| |||||||| |||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||    
T  26125724 cactttatcttctatttatgtg-ggtccagattgccacgtgtcagaattttatgcgggtgtaaagggtgtattgccacatggggtggtacatatatcacc 26125822  T
Q  92 actccaaactcaattctatcaaaatcaattctc 124  Q
    ||| |||||||||||||||||||||||||||||    
T  26125823 acttcaaactcaattctatcaaaatcaattctc 26125855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 3097215 - 3097162
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  3097215 caaactcaattctatcaaaattaattctcaccactgctataccaaacacacact 3097162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 3467633 - 3467686
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  3467633 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 3467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 44926955 - 44927008
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  44926955 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 44927008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 25697969 - 25697917
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  25697969 caaactcaattctatcaaaatcaattctctccaccgctataccaagcacacac 25697917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 30085647 - 30085596
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30085647 aaactcaattatatcaaaatcaattctcaccgccgctataccaaacacacac 30085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 22936802 - 22936748
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22936802 caaacttaattctatcaaaatcaattctcgccaccgccataccaaacacacacta 22936748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 38114544 - 38114598
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  38114544 caaactcaattctatcaaaataaattctcaccaccgccaaaccaaacacacacta 38114598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 26243225 - 26243274
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  26243225 aaactcaattctatcaaaatcaattctcactgccgctataccaaacacac 26243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 36114050 - 36113999
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  36114050 caaactcaattctatcaaaatcaattctcaccgccgtcataccaaacacaca 36113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 36121553 - 36121502
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  36121553 aaactcaattctatcaaaatcaattctcgacaccgctgtaccaaacacacac 36121502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3743860 - 3743921
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| |  |||||||||||| |||||||||||||||||| |||||||    
T  3743860 cactttatcttctatttatgtagggttcagattgccacgtgtcagaattttatgtgggtgta 3743921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 35615809 - 35615861
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||| ||||    
T  35615809 caaactcaattctatcaaaatcaattctctccaccgctgaaccaaacagacac 35615861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 140
Target Start/End: Complemental strand, 40742303 - 40742260
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaa 140  Q
    |||||||||||||||||||||||||||||||  |||||||||||    
T  40742303 aaactcaattctatcaaaatcaattctcaccgtcgctataccaa 40742260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 15206796 - 15206850
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||| ||||||| ||||| ||  |||||||||||||||    
T  15206796 caaactcaattctatcaaaattaattctctccaccactgaaccaaacacacacta 15206850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 28425481 - 28425427
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| ||||||||||||||||||||| || ||||||  |||||||||||||||||    
T  28425481 caaaatcaattctatcaaaatcaattttcgccaccgtcataccaaacacacacta 28425427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 29023323 - 29023377
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||| || ||||| | ||||| |||||||||||    
T  29023323 caaactcaattctatcaaaatcaattttcgccaccaccataccgaacacacacta 29023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 33627043 - 33626989
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||| | |||||||   |||||||||||||||    
T  33627043 caaactcaattctatcaaaatcaattccctccaccgccgaaccaaacacacacta 33626989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 42143373 - 42143323
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||||    
T  42143373 caaactcaattatatcataatcaattctcgccaccgccataccaaacacac 42143323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 24897596 - 24897547
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||| |||||||||||||||| ||| |||| |||||||||||||    
T  24897596 aaactcaattttatcaaaatcaattcttaccgccgccataccaaacacac 24897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 4941790 - 4941739
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    ||||||||||| ||||| ||||||||||  ||||||| ||||||||||||||    
T  4941790 caaactcaattatatcagaatcaattctagccaccgccataccaaacacaca 4941739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 27649845 - 27649896
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||||||||||||||||||||||  ||||||   ||||||||||||    
T  27649845 caaactcaattctatcaaaatcaattctcgtcaccgcccaaccaaacacaca 27649896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 45147275 - 45147220
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||| || |||||||||||||||||||||||| ||||   |||||||||||||||    
T  45147275 ccaaattcgattctatcaaaatcaattctcaccgccgccgaaccaaacacacacta 45147220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2165974 - 2165913
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||| | || ||||||| |||| ||||||||||||||| || |||||||    
T  2165974 cactttatcttctatttgtgtggggttcaggttgccacgtgtcagaattttgtgtgggtgta 2165913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 3465449 - 3465396
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||   ||||||   ||||||||||||||    
T  3465449 caaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacact 3465396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 20148849 - 20148910
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||| ||||||||| || | | |||||||| |||||||||||||||||| |||||||    
T  20148849 cactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgta 20148910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 29800961 - 29800900
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| || |||  ||||||| || ||||||||||||||| |||||||    
T  29800961 cactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgta 29800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 33899014 - 33898960
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33899014 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 33898960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 13739297 - 13739350
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13739297 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13739350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 13744797 - 13744850
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13744797 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 13744850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 17830007 - 17829957
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  17830007 caaactcaattctatcaaaatcaattctccccacagctataccaaacacac 17829957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 6208072 - 6208019
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  6208072 caaaatcaattctatcaaaatcaattatcgccaccgctataccaaacacacact 6208019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 3213494 - 3213592
Alignment:
Q  6 tatcttctatttatatgaggttcagattgcaacgtgtcagaattttatg---------cgggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||||||          ||||||||||||||||||||||||| || |||||||||||    
T  3213494 tatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcaccactc 3213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21293688 - 21293627
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| || ||| |||||||| |||||||||||||||||| |||||||    
T  21293688 cactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatgtgggtgta 21293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 29399802 - 29399750
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||| ||||    
T  29399802 caaactcaattctatcaaaatcaattctctccaccgccaaaccaaacatacac 29399750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 1312448 - 1312395
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||| |||||||||||||||||| || ||||||||  ||||||||||||||    
T  1312448 caaactcgattctatcaaaatcaattttctccaccgctgaaccaaacacacact 1312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 10826183 - 10826235
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||| ||||||||| |||||||||| |||| | |||||||||||||    
T  10826183 caaactcaattttatcaaaattaattctcaccgccgccaaaccaaacacacac 10826235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 16548216 - 16548255
Alignment:
Q  111 caaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  16548216 caaaatcaattctccccaccgccataccaaacacacacta 16548255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 21254888 - 21254834
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||| |||||| |||||||||    |||||||||||||||    
T  21254888 caaactcaattctatcaaactcaattatcaccaccgtggaaccaaacacacacta 21254834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 29409260 - 29409206
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||| |||||||||| || ||||||  |||||||| ||||||||    
T  29409260 caaactcaattctattaaaatcaattttcgccaccgtcataccaaaaacacacta 29409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 15151514 - 15151461
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||   ||||||   ||||||||||||||    
T  15151514 caaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacact 15151461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 16442369 - 16442324
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||| ||||||||||||||| ||||||| | |||||||||||    
T  16442369 tcaattctctcaaaatcaattctccccaccgccaaaccaaacacac 16442324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 699648 - 699684
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgc 132  Q
    ||||||||||||||||||||||||||| | |||||||    
T  699648 caaactcaattctatcaaaatcaattccctccaccgc 699684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 10853276 - 10853224
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10853276 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 10853224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 26519756 - 26519808
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26519756 caaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 26519808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 50664850 - 50664904
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50664850 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacacta 50664904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 3348336 - 3348389
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  3348336 aaactcaattctatcaaaatcaattctcgccaccgctatgccaaacacacacta 3348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 35930830 - 35930876
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaac 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  35930830 caaactcaattctatcaaaatcaattctcaccaccgatataccaaac 35930876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 44939425 - 44939371
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  44939425 caaattcaattctatcaaaatcaattatcgccaccgctataccaaacacacacta 44939371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 27748657 - 27748746
Alignment:
Q  6 tatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    |||||||||||| | || ||| ||| |||| || |||||||||||| ||  |||||||||||||||||||||||| || |||||||||||    
T  27748657 tatcttctatttgtgtggggtccaggttgccacatgtcagaattttgtgtcggtgtattgccacatggggtggtacatgtatcaccactc 27748746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 35930880 - 35930929
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  35930880 caaactcaattctatcaaaatcaattctcaccaccagtataccaaacaca 35930929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 55154593 - 55154646
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||||||    
T  55154593 caaactcaattctatcaaaatcaattctcgccactgccataccaaacacacact 55154646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 42318421 - 42318473
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||||||    
T  42318421 caaactcaattctatcaaaatcaattatcgtcaccgctataccaaacacacac 42318473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 4984673 - 4984727
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| |||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  4984673 caaattcaattatatcaaaatcaattctccccaccgccataccaaacacacacta 4984727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 10334230 - 10334284
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||  |||||| ||| |||||||||||||    
T  10334230 caaactcaattctatcaaaatcaattctcgtcaccgccatatcaaacacacacta 10334284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 23496409 - 23496463
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||||||||    
T  23496409 caaactcaattctatcaaaatcaattctcctcgccgccataccaaacacacacta 23496463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 20813245 - 20813290
Alignment:
Q  104 attctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||    
T  20813245 attctatcaaaatcaattctctccaccgatataccaaacacacact 20813290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 31618421 - 31618368
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||  ||||||  ||||||||||||||||    
T  31618421 caaactcaattctatcaaaatcaattcttcccaccgtcataccaaacacacact 31618368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 38125451 - 38125398
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| ||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  38125451 caaattcaattctatcaaaatcaattctcgtcaccgccataccaaacacacact 38125398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 38172316 - 38172263
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  38172316 caaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 38172263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 48189451 - 48189398
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| || |||||||  |||||||||||||||    
T  48189451 caaactcaattctatcaaaatcaattatcgccaccgccctaccaaacacacact 48189398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 38340905 - 38340949
Alignment:
Q  104 attctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  38340905 attctatcaaaatcaattctcaccaacgccataccaaacacacac 38340949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 8424739 - 8424689
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||||||||| |||||| | ||||||||||||| ||||||||    
T  8424739 caaactcaattctatcaaattcaattatgaccaccgctatactaaacacac 8424689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 15511385 - 15511332
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||  ||||||||||||||||| || ||||||| ||||||||||||||||    
T  15511385 caaactccgttctatcaaaatcaattatcgccaccgccataccaaacacacact 15511332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 30809970 - 30809917
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||| ||||||||||||||||| || |||| |||||||||| ||||    
T  30809970 ccaaactcaattttatcaaaatcaattctccccgccgccataccaaacatacac 30809917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 52966818 - 52966762
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactaca 152  Q
    |||| ||||||||||||||||||||| || ||||| | | |||||||||||||||||    
T  52966818 caaaatcaattctatcaaaatcaattttctccacctccaaaccaaacacacactaca 52966762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 36150283 - 36150322
Alignment:
Q  56 gggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  36150283 gggtgtattgccacatggggtggtacatgtatcaccactc 36150322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 30811541 - 30811487
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| |||||| |||||||||||||||||  ||||||  ||||||||||||||||    
T  30811541 caaattcaattatatcaaaatcaattctcgtcaccgccctaccaaacacacacta 30811487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 31084284 - 31084334
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||| |||||||| ||||||||||||||| ||||||| | |||||||||||    
T  31084284 caaaatcaattctttcaaaatcaattctcgccaccgccaaaccaaacacac 31084334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 42475801 - 42475855
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||| |||||||||||||  |||||| | ||||||| |||||||    
T  42475801 caaactcaattctataaaaatcaattctcgtcaccgccaaaccaaacgcacacta 42475855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 35425425 - 35425477
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||||||  ||||||  || ||||||||||||    
T  35425425 caaactcaattctatcaaaatcaattctcgtcaccgcccta-caaacacacact 35425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 53074994 - 53075046
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||| |||||||||||||| ||||| ||||  || |||||||||||    
T  53074994 caaactcaattatatcaaaatcaattttcaccgccgccgtatcaaacacacac 53075046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 35760295 - 35760348
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35760295 caaactcaattctatcaaaatcaattctccccaccgctataccaaacacacact 35760348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 8049057 - 8049003
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  8049057 caaactcaattctatcaaaatcaattctcaccgccgctataccaaagacacacta 8049003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 32030820 - 32030874
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32030820 caaactcaattctatcaaaatcaattctctccaccactataccaaacacacacta 32030874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 39987973 - 39987920
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  39987973 caaactcaattctatcaaaatcaattctcaccgccggtataccaaacacacact 39987920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 3667960 - 3668012
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3667960 caaactcaattctatcaaaatcaattctctccaccactataccaaacacacac 3668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 24045936 - 24045990
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  24045936 caaattcaattctatcaaaatcaattctcaccaccgccataccaaacacatacta 24045990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 5710392 - 5710339
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  5710392 caaactccattctatcaaaatcaattctcgccaccgccataccaaacacacact 5710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Complemental strand, 7385937 - 7385884
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  7385937 aaacttaattctatcaaaatcaattctcaccgccgctatactaaacacacacta 7385884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 40885318 - 40885371
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  40885318 aaactcaattctaacaaaatcaattttcaccaccgccataccaaacacacacta 40885371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 41834998 - 41835050
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||||    
T  41834998 caaactgaattctatcaaaatcaattctccccaccgccataccaaacacacac 41835050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 32454642 - 32454697
Alignment:
Q  96 caaactcaattcta-tcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||    
T  32454642 caaactcaattctaatcaaaatcaattctcgccaccgccataccaaacacacacta 32454697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 10058180 - 10058234
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||| ||||||||||||||||| ||||||| |||| ||||||||||||    
T  10058180 caaactcaattatatcaaaatcaattctccccaccgccatactaaacacacacta 10058234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 40495364 - 40495310
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||  || |||| |||||||||||||||||    
T  40495364 caaactcaattctatcaaaatcaattcttcccgccgccataccaaacacacacta 40495310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 40791076 - 40791022
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| || |||  |||||||||||||||||    
T  40791076 caaactcaattctatcaaaatcaattctccccgccgtgataccaaacacacacta 40791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 22482295 - 22482348
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| |||||||||||||||||||||||| || |||| ||||||||||||||||    
T  22482295 caaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacact 22482348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 42146413 - 42146466
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| || |||  ||||||||||||||||    
T  42146413 caaactcaattctatcaaaatcaattctccccgccgtcataccaaacacacact 42146466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 33953908 - 33953856
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||||||||||    
T  33953908 caaactcaattctaccaaaatcaattttcaccactgccataccaaacacacac 33953856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 13253089 - 13253038
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    ||||||||||||||||||||||||||||| |||||||   ||||||||||||    
T  13253089 caaactcaattctatcaaaatcaattctcgccaccgcccaaccaaacacaca 13253038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 2430303 - 2430250
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||| |||||||| ||||||| ||||||| |||||||| |||||||    
T  2430303 caaactcaattccatcaaaatgaattctcgccaccgccataccaaatacacact 2430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 7715046 - 7715095
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    |||||||||||||||||||||||||| | |||||||| |||| |||||||    
T  7715046 caaactcaattctatcaaaatcaatttttaccaccgccatacaaaacaca 7715095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 27021234 - 27021290
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactaca 152  Q
    ||||||||||| ||||||||||| |||| |||||||| | |||||||||| ||||||    
T  27021234 caaactcaattatatcaaaatcagttctaaccaccgccaaaccaaacacatactaca 27021290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 5257148 - 5257187
Alignment:
Q  56 gggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  5257148 gggtgtattgccacatggggtggtacatgtatcaccactc 5257187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 41334610 - 41334571
Alignment:
Q  56 gggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  41334610 gggtgtattgccacatggggtggtacatgtatcaccactc 41334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 131
Target Start/End: Complemental strand, 41740599 - 41740564
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccg 131  Q
    ||||||||||||||||||||||||||||| ||||||    
T  41740599 caaactcaattctatcaaaatcaattctccccaccg 41740564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 9275489 - 9275439
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||| |||||||||||||| || ||||||| | ||||||||||||    
T  9275489 aaactcaattttatcaaaatcaattttccccaccgccaaaccaaacacaca 9275439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 35847896 - 35847842
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||   ||||||   |||||||||||||||    
T  35847896 caaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacacta 35847842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38470668 - 38470729
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| || ||| |||||| | |||| ||||||||||||| |||||||    
T  38470668 cactttatcttctatttatgtggggtccagattaccacgtatcagaattttatgtgggtgta 38470729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 14072579 - 14072631
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14072579 caaactcaattctatcaaaatcaattctcaccaccgccataccaaacacacac 14072631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 9889344 - 9889290
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  9889344 caaactcaattctatcaaaatcaattctcaccaccgccataccaaacacatacta 9889290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 28987095 - 28987149
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  28987095 caaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacacta 28987149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 29149316 - 29149262
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  29149316 caaactcaattctatcaaaatcaattctccccaccgctataccaaatacacacta 29149262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 32238068 - 32238015
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  32238068 caaactcaattctatcaaaatcaattatcgccaccgctataccaaacacacact 32238015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 46830077 - 46830025
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  46830077 aaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 46830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 43781528 - 43781477
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  43781528 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacaca 43781477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 39187811 - 39187865
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  39187811 caaactcaattctatcaaaatcaattctctccaccgccaaaccaaacacacacta 39187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 54150603 - 54150657
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  54150603 caaactcaattctatcaaaatcaattcttgccaccgccataccaaacacacacta 54150657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 9893788 - 9893837
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  9893788 caaattcaattctatcaaaatcaattctcaccaccgccataccaaacaca 9893837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 6138629 - 6138577
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  6138629 caaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacac 6138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 19592239 - 19592187
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  19592239 aaactcaattctatcaaaatcaattctccccaccgccatatcaaacacacact 19592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 26426124 - 26426072
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  26426124 caaactcaattctatcaaaatcaattctccccaccgtcataccaaacacacac 26426072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 48550299 - 48550347
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48550299 tcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 48550347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 39636862 - 39636913
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    ||||||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  39636862 caaactcaattctatcaaaatcaattctcgccaccgtcataccaaacacaca 39636913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 30842208 - 30842258
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  30842208 caaactcaattctatcaaaatcaattctcgtcaccgccataccaaacacac 30842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 15603437 - 15603490
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||  | ||||||||||||||    
T  15603437 caaactcaattctatcaaaatcaattctccccaccgtcaaaccaaacacacact 15603490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 26651857 - 26651805
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||| |||||||||||||||||||||| || |||| |||||||||||||||    
T  26651857 caaacttaattctatcaaaatcaattctcgccgccgccataccaaacacacac 26651805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 41866231 - 41866287
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactaca 152  Q
    ||||||||||| |||||||||||||| || ||||||| | |||||||||||||||||    
T  41866231 caaactcaattttatcaaaatcaattatcgccaccgccaaaccaaacacacactaca 41866287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 48550452 - 48550397
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||| |||||||||||||||||||||||  ||||||| | |||||||||||||||    
T  48550452 ccaaaatcaattctatcaaaatcaattcttcccaccgccaaaccaaacacacacta 48550397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 14076091 - 14076145
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||||| |||| | || ||||||| ||||    
T  14076091 caaactcaattctatcaaaatcaattctcaccgccgccaaactaaacacatacta 14076145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 14564155 - 14564101
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| || ||||   |||||||||||||||    
T  14564155 caaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacacta 14564101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 15619675 - 15619729
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||| |||||||| ||||| ||||||||| || |||||||||||||||||||||    
T  15619675 ccaaaatcaattctctcaaactcaattctccccgccgctataccaaacacacact 15619729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 16566382 - 16566436
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| |  | || |||||||||||||||||    
T  16566382 caaactcaattctatcaaaatcaattctccctgctgccataccaaacacacacta 16566436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27893853 - 27893747
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatg---------cgggtgtattgccacatggggtggtatatatatcacc 91  Q
    |||| |||||||||||||| || |||  ||||||| || |||||||||||||||          ||||||||||||||||||||||||| || |||||||    
T  27893853 cactttatcttctatttatgtggggtcaagattgccacatgtcagaattttatgtgggtgtaaagggtgtattgccacatggggtggtacatgtatcacc 27893754  T
Q  92 actccaa 98  Q
    |||||||    
T  27893753 actccaa 27893747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 49519807 - 49519863
Alignment:
Q  96 caaactcaattctatcaaaatcaattct---caccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||| |||||||   ||||||||| ||||||||||||||||    
T  49519807 caaactcaattctatcaaaaccaattctcaccaccaccgccataccaaacacacact 49519863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 51923017 - 51923071
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||| ||||||||||||||  | |||| |||||||||||||||||    
T  51923017 caaactcaattctaacaaaatcaattctcgtcgccgccataccaaacacacacta 51923071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 53532054 - 53532108
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||| |||||||||||||||||||||||||   |||||||||| ||||    
T  53532054 caaactcaattttatcaaaatcaattctcaccaccgccgaaccaaacacatacta 53532108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 54735660 - 54735606
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||||||| |||| | ||||| |||| ||||    
T  54735660 caaactcaattctatcaaaatcaattctcaccgccgccaaaccaagcacatacta 54735606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 149
Target Start/End: Complemental strand, 26459897 - 26459852
Alignment:
Q  104 attctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  26459897 attctatcaaaattaattctcgccaccgccataccaaacacacact 26459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31680991 - 31681044
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatg 54  Q
    |||| |||||||||||||| || |||| ||||||| ||||||||||||||||||    
T  31680991 cactttatcttctatttatgtggggtttagattgccacgtgtcagaattttatg 31681044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 54153121 - 54153170
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    ||||||||||| ||| |||||||||| || ||||||||||||||||||||    
T  54153121 caaactcaattatattaaaatcaattatcgccaccgctataccaaacaca 54153170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 25312792 - 25312844
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||||||||||||||||||   ||||| | |||||||||||||    
T  25312792 caaactcaattctatcaaaatcaattctcgttaccgccaaaccaaacacacac 25312844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 31520372 - 31520328
Alignment:
Q  104 attctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||    
T  31520372 attctaccaaaatcaattctcgccatcgctataccaaacacacac 31520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Original strand, 27864717 - 27864756
Alignment:
Q  56 gggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  27864717 gggtgtattgccacatggggtggtacatgtatcaccactc 27864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 43772132 - 43772078
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||| ||  |||| | | |||||||||||||||    
T  43772132 caaactcaattctatcaaaatcaattatcgtcaccaccaaaccaaacacacacta 43772078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 13167602 - 13167655
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||| |||||||||||||| |  | ||||| ||||||||||||||||    
T  13167602 caaactcaattatatcaaaatcaatttttcctaccgccataccaaacacacact 13167655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23036069 - 23036130
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| || ||| ||| |||| ||||||||||||||| || |||||||    
T  23036069 cactttatcttctatttatgtggggtccaggttgccacgtgtcagaattttgtgtgggtgta 23036130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 23204789 - 23204728
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||||||||||||| || ||| ||| |||| || ||||||||||||||| |||||||    
T  23204789 cactttatcttctatttatgtggggtccaggttgccacatgtcagaattttatgtgggtgta 23204728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 45780019 - 45779970
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    |||||||||||||||| ||||||||||||| | |||| | ||||||||||    
T  45780019 caaactcaattctatcgaaatcaattctcatcgccgccaaaccaaacaca 45779970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 48556630 - 48556683
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| |  ||||||||  ||||||| ||||||    
T  48556630 caaactcaattctatcaaaatcaattatttccaccgctgaaccaaacgcacact 48556683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 48407707 - 48407679
Alignment:
Q  96 caaactcaattctatcaaaatcaattctc 124  Q
    |||||||||||||||||||||||||||||    
T  48407707 caaactcaattctatcaaaatcaattctc 48407679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 48463452 - 48463400
Alignment:
Q  10 ttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||||||||| || |||||||||| | || ||||||||||||||| |||||||    
T  48463452 ttctatttatgtggggttcagattaccacatgtcagaattttatgtgggtgta 48463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 54488682 - 54488742
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacatcaa 156  Q
    |||| |||||||| |||||||||||| || |||||||   |||||||||||||| ||||||    
T  54488682 caaaatcaattctgtcaaaatcaattatctccaccgcagaaccaaacacacacttcatcaa 54488742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 124
Target Start/End: Complemental strand, 55638764 - 55638736
Alignment:
Q  96 caaactcaattctatcaaaatcaattctc 124  Q
    |||||||||||||||||||||||||||||    
T  55638764 caaactcaattctatcaaaatcaattctc 55638736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 55966352 - 55966296
Alignment:
Q  6 tatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||||||||||||| || |||  ||||||| || ||||||||||||||| |||||||    
T  55966352 tatcttctatttatgtggggtctagattgccacctgtcagaattttatgtgggtgta 55966296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 2213607 - 2213659
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2213607 caaactcaattctatcaaaatcaattctccccaccgctataccaaacacacac 2213659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 2215357 - 2215407
Alignment:
Q  100 ctcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2215357 ctcaattctatcaaaatcaattctcacaaccgctataccaaacacacacta 2215407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 36548300 - 36548353
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  36548300 caaactcaattctatcaaaatcaattttcaccaccgccataccaaacacacact 36548353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 28127294 - 28127242
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  28127294 caaactaaattctatcaaaatcaattctccccaccgctataccaaacacacac 28127242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 9988508 - 9988454
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  9988508 caaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacacta 9988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 1945046 - 1944993
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  1945046 caaactcaattctatcaaaatcaattctccccgccgccataccaaacacacact 1944993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 7472681 - 7472629
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||    
T  7472681 caaactcaattctatcaaaatcaattctcgccaccgtcataccaaacacacac 7472629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 32502086 - 32502137
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  32502086 caaactcaattctatcaaaatcaattttcacgaccgccataccaaacacaca 32502137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 8170413 - 8170466
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||| ||||||| |||||||  |||||||||||||||    
T  8170413 caaactcaattctatcaaaattaattctcgccaccgccctaccaaacacacact 8170466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 44619068 - 44619015
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||| || |||| ||||||||||||    
T  44619068 caaactcaattctatcaaaatcaattctcgccatcggtatatcaaacacacact 44619015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 30007560 - 30007509
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    ||||||||||||||||||||||||||||| |||| || |||||| |||||||    
T  30007560 caaactcaattctatcaaaatcaattctccccacagccataccatacacaca 30007509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 151
Target Start/End: Complemental strand, 31562694 - 31562639
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactac 151  Q
    ||||||||||| ||||||||||||||||| ||||| | ||||||||||| ||||||    
T  31562694 caaactcaattttatcaaaatcaattctcgccaccaccataccaaacacgcactac 31562639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 36312384 - 36312431
Alignment:
Q  103 aattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||| || |||| |||||||||||||||||    
T  36312384 aattctatcaaaatcaattctccccgccgccataccaaacacacacta 36312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 149
Target Start/End: Complemental strand, 5916242 - 5916196
Alignment:
Q  103 aattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||    
T  5916242 aattctatcaaaatcaattctccccgccgccataccaaacacacact 5916196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 34433313 - 34433263
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||||||    
T  34433313 caaactcaattctatcaaaatcaattctcttcaccgctgaaccaaacacac 34433263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 43436305 - 43436263
Alignment:
Q  109 atcaaaatcaattctcaccaccgctataccaaacacacactac 151  Q
    |||||||||||||||| ||||||| ||||||||||||||||||    
T  43436305 atcaaaatcaattctcgccaccgccataccaaacacacactac 43436263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 14821263 - 14821312
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||    
T  14821263 caaactcaattctatcaaaattaattatcgtcaccgctataccaaacaca 14821312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 2213748 - 2213800
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||||||||||| |  | || |||||||||||||||    
T  2213748 caaactcaattctatcaaaatcaattctctcatctgccataccaaacacacac 2213800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 25747889 - 25747837
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||| |||||| ||||||||||   |||||||||||||    
T  25747889 caaactcaattctatcaaactcaattatcaccaccgcggaaccaaacacacac 25747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 39141477 - 39141425
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||| ||||||||||||||||| |||||||   |||||||||||||    
T  39141477 caaactcaattatatcaaaatcaattctcgccaccgcccaaccaaacacacac 39141425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 27911491 - 27911546
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||| || || ||||   |||||||||||||||    
T  27911491 ccaaactcaattctatcaaaatcaattatcgccgccgccgaaccaaacacacacta 27911546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 42515983 - 42515936
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaaca 143  Q
    ||||||||||| |||||||||||||| || ||||||| ||||||||||    
T  42515983 caaactcaattatatcaaaatcaattttctccaccgccataccaaaca 42515936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 43490412 - 43490362
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaatttt 51  Q
    |||| |||||||||||||| || ||| |||||||| |||||||||||||||    
T  43490412 cactttatcttctatttatgtggggtccagattgccacgtgtcagaatttt 43490362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 31224781 - 31224833
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||||||||||||||| ||  |||||| | |||||| ||||||    
T  31224781 caaactcaattctatcaaaatcaattttcgtcaccgccaaaccaaatacacac 31224833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 42089533 - 42089481
Alignment:
Q  98 aactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| ||||||||||||||||||| ||| |||||| | | |||||||||||||    
T  42089533 aacttaattctatcaaaatcaattttcatcaccgccaaatcaaacacacacta 42089481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 9202 - 9256
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  9202 caaactcaattctatcaaaatcaattctcaccaccgccataccaaacacatacta 9256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 1199943 - 1199996
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  1199943 caaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 1199996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 6166225 - 6166278
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6166225 caaattcaattctatcaaaatcaattctcaccaccgcgataccaaacacacact 6166278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 43728888 - 43728835
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43728888 caaactcaattctatcaaaatcaattctctccatcgctataccaaacacacact 43728835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 50406246 - 50406299
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  50406246 caaactcaattttatcaaaatcaattctcgccaccgctataccaaacacacact 50406299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 42850228 - 42850176
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  42850228 aaactcaattctatcaaaatcaattctcgccaccgccataccaaacacacact 42850176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 11023340 - 11023289
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11023340 caaactcaattctatcaaaatcaattttcaccaccgccataccaaacacaca 11023289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 10470705 - 10470759
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  10470705 caaactcaattctatcaaaatcaattctcgccaccgccctaccaaacacacacta 10470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 12247536 - 12247589
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  12247536 aaactcaattctattaaaatcaattttcatcaccgctataccaaacacacacta 12247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 26058362 - 26058411
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26058362 tcaattctatcaaaatcaattctcgccaccgccataccaaacacacacta 26058411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 50977350 - 50977297
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  50977350 caaactccattctatcaaaatcaattctcgccaccgccataccaaacacacact 50977297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 45710164 - 45710211
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaaca 143  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  45710164 caaactcaattctatcaaaatcaattatcgccaccgctataccaaaca 45710211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 159
Target Start/End: Original strand, 47123502 - 47123565
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacatcaaatt 159  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||| | ||||||    
T  47123502 caaactcaattctatcaaaatcaatttttgccaccgccataccaaacacacactaaaacaaatt 47123565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 13056113 - 13056167
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||| |||||||||||||||||| || ||||||| |||||||||||||||||    
T  13056113 caaactccattctatcaaaatcaattatcgccaccgccataccaaacacacacta 13056167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 35569212 - 35569158
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| |||||||||||||||||||||||| || |||| |||||||||||||||||    
T  35569212 caaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacacta 35569158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 13931739 - 13931791
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  13931739 aaactcaattctatcaaaatcaa-tcccaccaccgccataccaaacacacacta 13931791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 20800287 - 20800234
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| |||||||||||||||||||||||| || |||| ||||||||||||||||    
T  20800287 caaaatcaattctatcaaaatcaattctccccgccgccataccaaacacacact 20800234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 27801657 - 27801608
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  27801657 tcaattctatcaaaatcaattctcgccaccgtcataccaaacacacacta 27801608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 31223490 - 31223543
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  31223490 caaactcaattctattaaaatcaattctccccaccgccaaaccaaacacacact 31223543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 48511024 - 48511077
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||| |||||||||||||||| || |||| ||||||||||||||||    
T  48511024 caaactcaattcaatcaaaatcaattctcgccgccgccataccaaacacacact 48511077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 25230122 - 25230173
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||| |||||||||||||||||||| ||||||  ||||||||||||||    
T  25230122 caaactcagttctatcaaaatcaattctcgccaccgtcataccaaacacaca 25230173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 35536187 - 35536241
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||| ||||| |||| ||| |||||| |||||||||||||||||    
T  35536187 caaactcaattctattaaaattaattttcatcaccgccataccaaacacacacta 35536241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37814867 - 37814969
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttat---------gcgggtgtattgccacatggggtggtatatatatcacc 91  Q
    |||| |||||||||||||| || ||| |||||||| |||||||||||||||||           ||||||||||||||||||||||||| || |||||||    
T  37814867 cactttatcttctatttatgtggggtccagattgccacgtgtcagaattttatatggatgtaaagggtgtattgccacatggggtggtacatgtatcacc 37814966  T
Q  92 act 94  Q
    |||    
T  37814967 act 37814969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 7826364 - 7826311
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||| ||||||||||||||||||||| || ||||||| | ||||||||||||||    
T  7826364 caaaatcaattctatcaaaatcaattttctccaccgccaaaccaaacacacact 7826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 12468328 - 12468384
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacat 153  Q
    ||||||||||||||||||| ||||||||  || |||| ||||||||||||||||||||    
T  12468328 caaactcaattctatcaaa-tcaattcttcccgccgccataccaaacacacactacat 12468384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 6464723 - 6464775
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||| |||||||||||||||||  |||| |||||||||||| ||||    
T  6464723 caaactcaattatatcaaaatcaattctcgtcaccactataccaaacaaacac 6464775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 95
Target Start/End: Complemental strand, 43571033 - 43570994
Alignment:
Q  56 gggtgtattgccacatggggtggtatatatatcaccactc 95  Q
    ||||||||||||||||||||||||| |||||||| |||||    
T  43571033 gggtgtattgccacatggggtggtacatatatcatcactc 43570994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 6061258 - 6061308
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||| ||||||||||||||||||||| |||||||||  | |||||||||||    
T  6061258 caaattcaattctatcaaaatcaattttcaccaccgtcaaaccaaacacac 6061308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 36205307 - 36205357
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||  | ||||||||||||||||||||  |||||||||||||    
T  36205307 caaactcaattccgttaaaatcaattctcaccaccgtcataccaaacacac 36205357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 40352506 - 40352560
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||| ||||||||||||||||||||||||  ||||||   |||||||||||||||    
T  40352506 caaaatcaattctatcaaaatcaattctcctcaccgcacaaccaaacacacacta 40352560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 4369829 - 4369776
Alignment:
Q  95 ccaaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||| |||||||| |||||||||||| || ||||||| | |||||||||||||    
T  4369829 ccaaaatcaattctctcaaaatcaattttctccaccgccaaaccaaacacacac 4369776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 34718567 - 34718620
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| |  ||||||  | ||||||||||||||    
T  34718567 caaactcaattctatcaaaatcaattttttccaccgtcaaaccaaacacacact 34718620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 149
Target Start/End: Complemental strand, 291744 - 291704
Alignment:
Q  109 atcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||| ||||| | ||||||||||||||||    
T  291744 atcaaaatcaattctcgccaccaccataccaaacacacact 291704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 7765289 - 7765241
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||  ||||||   ||||||||||||||    
T  7765289 tcaattctatcaaaatcaattctcgtcaccgcataaccaaacacacact 7765241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 49242992 - 49242956
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgc 132  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  49242992 caaactcaattatatcaaaattaattctcaccaccgc 49242956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 3622456 - 3622402
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  3622456 caaactcaattctatcaaaatcaattctcgccaccgccataacaaacacacacta 3622402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 10371954 - 10371900
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||    
T  10371954 caaactcaattctatcaaaatcaattctccccaccgttttaccaaacacacacta 10371900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 37639543 - 37639597
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  37639543 caaactcaattctatcaaaatcaattctccccgccgccataccaaacacacacta 37639597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 37562684 - 37562737
Alignment:
Q  97 aaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||||||    
T  37562684 aaactcaattctatcaaaatcaattctccccaccgccaaaccaaacacacacta 37562737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 48459823 - 48459876
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  48459823 caaactcaattctatcaaaatcaattctcaccaacgtcataccaaacacacact 48459876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 19097510 - 19097562
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  19097510 caaactcaattctatcaaaattaattctcaccgccgccataccaaacacacac 19097562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 41715775 - 41715822
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41715775 tcaattctatcaaaatcaattctcgccaccgccataccaaacacacac 41715822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 39977665 - 39977719
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||| ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  39977665 caaactaaattctatcaaaatcaattatcgccaccgccataccaaacacacacta 39977719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 43631692 - 43631642
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  43631692 caaactcaattctatcaaaatcaattatccccaccgccataccaaacacac 43631642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 34010452 - 34010504
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||    
T  34010452 caaactcaattctatcaaaatcaattctcgccaccgcca-accaaacacacact 34010504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 34365978 - 34365921
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacat 153  Q
    ||||||| ||| ||||||||||||||||  ||||||| ||||||||||||||||||||    
T  34365978 caaactccattatatcaaaatcaattctagccaccgccataccaaacacacactacat 34365921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 3342903 - 3342955
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||||||||    
T  3342903 caaactcaattctatcaaaattaattctccccaccgccaaaccaaacacacac 3342955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 3375603 - 3375660
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacactacat 153  Q
    ||||||||||||||||||||||||||||| ||| | |  ||||||||||| |||||||    
T  3375603 caaactcaattctatcaaaatcaattctctccatcaccgtaccaaacacatactacat 3375660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 39391128 - 39391083
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||||||||||| || ||||||| |||||||||||||    
T  39391128 tcaattctatcaaaatcaattttcgccaccgccataccaaacacac 39391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 46541713 - 46541762
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    |||||||||||||||||||||||||| | |||||||| | ||||||||||    
T  46541713 caaactcaattctatcaaaatcaattttaaccaccgccaaaccaaacaca 46541762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 32187060 - 32187106
Alignment:
Q  103 aattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||| ||||||  |||||||||| |||||    
T  32187060 aattctatcaaaatcaattctcgccaccgtcataccaaacatacact 32187106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 34010957 - 34010903
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||| ||||| | || | |||||||||| ||||    
T  34010957 caaactcaattctatcaaaatcaattatcaccgctgccaaaccaaacacatacta 34010903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 38230186 - 38230232
Alignment:
Q  101 tcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||||||||||||||||||||||| |  |||| ||||||||||||||    
T  38230186 tcaattctatcaaaatcaattctctcggccgccataccaaacacaca 38230232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 47022032 - 47022082
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||||||||||||||||||| || |||||   |||||||||||||    
T  47022032 caaactcaattctatcaaaatcaattatccccaccatcataccaaacacac 47022082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 47217537 - 47217487
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    |||||||||||||||||||||||||| ||||| ||||   |||||||||||    
T  47217537 caaactcaattctatcaaaatcaattttcaccgccgccgaaccaaacacac 47217487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 48134692 - 48134742
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacac 146  Q
    ||||||||||||||||||||| |||| || | ||||| |||||||||||||    
T  48134692 caaactcaattctatcaaaattaattttcgcaaccgccataccaaacacac 48134742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 386477 - 386428
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacaca 145  Q
    ||||||||||| |||||||||||||| | |||||||| | ||||||||||    
T  386477 caaactcaattatatcaaaatcaattttaaccaccgccaaaccaaacaca 386428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 9456219 - 9456268
Alignment:
Q  98 aactcaattctatcaaaatcaattctcaccaccgctataccaaacacaca 147  Q
    |||| |||||||||||||||||||||||| |||||  ||||||| |||||    
T  9456219 aacttaattctatcaaaatcaattctcactaccgccgtaccaaagacaca 9456268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 12632072 - 12632031
Alignment:
Q  103 aattctatcaaaatcaattctcaccaccgctataccaaacac 144  Q
    |||||||||||||||||||||| ||||||| | |||||||||    
T  12632072 aattctatcaaaatcaattctctccaccgcgaaaccaaacac 12632031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 44326267 - 44326328
Alignment:
Q  1 cactctatcttctatttatatgaggttcagattgcaacgtgtcagaattttatgcgggtgta 62  Q
    |||| |||| ||||||||| || | | |||||||| |||||||||||||||||| |||||||    
T  44326267 cactttatcatctatttatgtgggatccagattgccacgtgtcagaattttatgtgggtgta 44326328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 89
Target Start/End: Original strand, 9216455 - 9216487
Alignment:
Q  57 ggtgtattgccacatggggtggtatatatatca 89  Q
    ||||||||| |||||||||||||||||||||||    
T  9216455 ggtgtattgtcacatggggtggtatatatatca 9216487  T

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Target: scaffold0369 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 8541 - 8594
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacact 149  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||||||||    
T  8541 caaactcaattctatcaaaatcaattattcccaccgccataccaaacacacact 8594  T

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Target: scaffold0394 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 5839 - 5785
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||| ||||||||||||||||| | ||| | |||||||||||||||||    
T  5839 caaactcaattatatcaaaatcaattctccctaccaccataccaaacacacacta 5785  T

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Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 253220 - 253274
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    ||||||||||||||||||||||||||||| || ||||   |||||||||||||||    
T  253220 caaactcaattctatcaaaatcaattctctccgccgcccaaccaaacacacacta 253274  T

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Target: scaffold0983 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 2277 - 2225
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    ||||||||||||| |||||||||||| || ||||||| |||||||||| ||||    
T  2277 caaactcaattctgtcaaaatcaattttcgccaccgccataccaaacagacac 2225  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 2036 - 1982
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacacta 150  Q
    |||||||||||||||||||||||||| ||  |||||| |  ||||||||||||||    
T  2036 caaactcaattctatcaaaatcaattatcgacaccgccaatccaaacacacacta 1982  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 29132 - 29080
Alignment:
Q  96 caaactcaattctatcaaaatcaattctcaccaccgctataccaaacacacac 148  Q
    |||||| ||||||||||||||||||| | |||||| | | |||||||||||||    
T  29132 caaacttaattctatcaaaatcaattattaccaccaccaaaccaaacacacac 29080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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