View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF12503_low_3 (Length: 351)
Name: NF12503_low_3
Description: NF12503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF12503_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 17 - 310
Target Start/End: Complemental strand, 4932476 - 4932183
Alignment:
| Q |
17 |
caatggaacctcctagtccaaaatctgaaaaaccaccaaagaattggtttagacgttggtgttgttgttcctgcatgtcaggttcaccttgttactaata |
116 |
Q |
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| T |
4932476 |
caatggaacctcctaatccaaaatctgaaaaaccaccaaagaattggtttagacgttggtgttgttgttcctgcttgtcaggttcaccttgttactaata |
4932377 |
T |
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| Q |
117 |
aaaggtcttgaaatggtgttgaaaaagaaattatcaagtgacaatgcctctcaattataatgtttgcctaatcaaatatttggattcggcaccccgacag |
216 |
Q |
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| T |
4932376 |
aaaggtcttgaaatggtgttgaaaaagaaattatcaagtgacaatgcgtctcaattataatgtctgcctaatcaaatatttggattcggcaccccgacag |
4932277 |
T |
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| Q |
217 |
ccatggattcttagcattcacgcgattgaaatgttggtggctgttccatcaagatcgaacgatccagattcaagtttggtattttcaatcataa |
310 |
Q |
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| T |
4932276 |
ccagggattcttagcattcacgcgattgaaatgttggtggttgttccatcaagatcaaacgatccagattcaagtttggtattttcaatcataa |
4932183 |
T |
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