View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF12508_high_10 (Length: 235)

Name: NF12508_high_10
Description: NF12508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF12508_high_10
NF12508_high_10
[»] chr5 (32 HSPs)
chr5 (76-232)||(42949371-42949527)
chr5 (1-73)||(4566985-4567058)
chr5 (1-75)||(15510270-15510345)
chr5 (1-75)||(22650635-22650710)
chr5 (5-75)||(15509233-15509304)
chr5 (1-75)||(20988724-20988799)
chr5 (1-75)||(20991656-20991731)
chr5 (1-75)||(32521929-32522004)
chr5 (1-73)||(4567983-4568056)
chr5 (5-73)||(32521724-32521793)
chr5 (1-75)||(21387671-21387746)
chr5 (1-43)||(12936142-12936184)
chr5 (1-43)||(12950300-12950342)
chr5 (1-42)||(224631-224672)
chr5 (192-232)||(42949552-42949592)
chr5 (1-43)||(7345430-7345472)
chr5 (1-41)||(15615002-15615042)
chr5 (5-75)||(18693736-18693807)
chr5 (1-43)||(5061062-5061104)
chr5 (1-43)||(5062226-5062268)
chr5 (1-43)||(5384386-5384428)
chr5 (1-39)||(12933785-12933823)
chr5 (1-39)||(12947946-12947984)
chr5 (1-43)||(15613539-15613581)
chr5 (1-43)||(18678010-18678052)
chr5 (1-43)||(42510148-42510190)
chr5 (1-43)||(42979482-42979524)
chr5 (5-42)||(5975794-5975831)
chr5 (1-42)||(19524017-19524058)
chr5 (1-42)||(19525329-19525370)
chr5 (1-42)||(27894064-27894105)
chr5 (1-42)||(42980750-42980791)
[»] chr8 (23 HSPs)
chr8 (76-229)||(2851171-2851322)
chr8 (76-229)||(2903203-2903354)
chr8 (1-72)||(10053754-10053826)
chr8 (1-43)||(24068364-24068406)
chr8 (1-73)||(10052138-10052211)
chr8 (5-73)||(6843793-6843864)
chr8 (1-75)||(6844580-6844655)
chr8 (1-43)||(38591047-38591089)
chr8 (1-43)||(41867956-41867998)
chr8 (1-44)||(21267198-21267241)
chr8 (1-44)||(37474075-37474118)
chr8 (1-43)||(24069486-24069528)
chr8 (1-43)||(29739683-29739725)
chr8 (1-43)||(31623940-31623982)
chr8 (1-43)||(31625424-31625466)
chr8 (1-39)||(36070212-36070250)
chr8 (1-39)||(37274921-37274959)
chr8 (1-43)||(43386742-43386784)
chr8 (1-42)||(39515233-39515274)
chr8 (7-43)||(8095386-8095422)
chr8 (7-43)||(14820233-14820269)
chr8 (7-43)||(37472443-37472479)
chr8 (7-43)||(43277961-43277997)
[»] chr7 (41 HSPs)
chr7 (1-75)||(41126273-41126348)
chr7 (1-75)||(30222680-30222755)
chr7 (5-75)||(36673843-36673914)
chr7 (1-75)||(41618506-41618581)
chr7 (1-75)||(30223983-30224058)
chr7 (1-75)||(34558308-34558383)
chr7 (1-75)||(41616658-41616733)
chr7 (1-75)||(41127178-41127253)
chr7 (1-73)||(38001538-38001611)
chr7 (1-75)||(2904054-2904129)
chr7 (1-75)||(35480242-35480316)
chr7 (1-43)||(18801249-18801291)
chr7 (5-52)||(34557435-34557483)
chr7 (1-41)||(45721808-45721848)
chr7 (1-75)||(7345948-7346023)
chr7 (5-75)||(33341336-33341407)
chr7 (1-75)||(38002521-38002596)
chr7 (1-75)||(38408281-38408356)
chr7 (1-44)||(40926558-40926601)
chr7 (5-43)||(17288260-17288298)
chr7 (1-43)||(19279652-19279694)
chr7 (1-43)||(19848874-19848916)
chr7 (1-43)||(25153692-25153734)
chr7 (1-43)||(33459583-33459625)
chr7 (1-43)||(43006419-43006461)
chr7 (1-46)||(7146814-7146859)
chr7 (1-42)||(43935219-43935260)
chr7 (1-60)||(14107866-14107926)
chr7 (1-60)||(14417823-14417883)
chr7 (1-43)||(18802429-18802471)
chr7 (1-43)||(19278387-19278429)
chr7 (1-43)||(22746360-22746402)
chr7 (1-43)||(24873637-24873679)
chr7 (1-35)||(38406052-38406086)
chr7 (1-43)||(40930452-40930494)
chr7 (5-43)||(41516384-41516422)
chr7 (1-43)||(43007689-43007731)
chr7 (1-43)||(46458753-46458795)
chr7 (1-52)||(2903078-2903130)
chr7 (1-37)||(38779011-38779047)
chr7 (1-60)||(43930353-43930413)
[»] chr3 (53 HSPs)
chr3 (1-75)||(53047931-53048006)
chr3 (1-75)||(52293530-52293605)
chr3 (5-75)||(53049044-53049115)
chr3 (1-74)||(55443558-55443632)
chr3 (1-73)||(32974232-32974305)
chr3 (1-72)||(53342750-53342822)
chr3 (1-75)||(32973173-32973248)
chr3 (1-75)||(39133051-39133126)
chr3 (1-75)||(39287504-39287579)
chr3 (1-75)||(48035331-48035406)
chr3 (1-74)||(5416232-5416306)
chr3 (1-66)||(19579310-19579376)
chr3 (1-72)||(39288449-39288521)
chr3 (1-66)||(52705324-52705390)
chr3 (1-73)||(52292628-52292701)
chr3 (1-73)||(5417057-5417130)
chr3 (1-73)||(7583504-7583577)
chr3 (5-65)||(48825850-48825911)
chr3 (1-73)||(55442628-55442701)
chr3 (1-60)||(11220680-11220740)
chr3 (5-75)||(1301070-1301141)
chr3 (1-75)||(17350109-17350184)
chr3 (5-75)||(40502222-40502293)
chr3 (1-43)||(8372656-8372698)
chr3 (1-43)||(10987693-10987735)
chr3 (1-42)||(11219464-11219505)
chr3 (1-73)||(11482996-11483069)
chr3 (5-72)||(7821996-7822064)
chr3 (1-51)||(19579254-19579305)
chr3 (5-43)||(48252971-48253009)
chr3 (1-43)||(51401391-51401433)
chr3 (1-43)||(54654006-54654048)
chr3 (1-61)||(19622940-19623001)
chr3 (5-73)||(40501846-40501915)
chr3 (1-41)||(8371254-8371294)
chr3 (1-41)||(41386164-41386204)
chr3 (25-75)||(11481959-11482010)
chr3 (1-44)||(32980491-32980534)
chr3 (1-44)||(47855377-47855420)
chr3 (1-44)||(54752650-54752693)
chr3 (1-43)||(12062424-12062466)
chr3 (5-43)||(26798946-26798984)
chr3 (1-43)||(29536748-29536790)
chr3 (1-39)||(32979122-32979160)
chr3 (1-39)||(33563983-33564021)
chr3 (1-43)||(41387473-41387515)
chr3 (1-39)||(42632740-42632778)
chr3 (1-43)||(42633926-42633968)
chr3 (1-43)||(43101928-43101970)
chr3 (1-43)||(47766991-47767032)
chr3 (1-38)||(19622039-19622076)
chr3 (5-73)||(48034047-48034115)
chr3 (1-42)||(49122043-49122084)
[»] scaffold0177 (1 HSPs)
scaffold0177 (1-75)||(1789-1864)
[»] chr1 (44 HSPs)
chr1 (1-75)||(2236847-2236922)
chr1 (1-75)||(2237985-2238060)
chr1 (1-75)||(35683089-35683164)
chr1 (1-73)||(48935119-48935192)
chr1 (1-75)||(34531697-34531772)
chr1 (5-75)||(35684210-35684280)
chr1 (1-75)||(48934275-48934350)
chr1 (1-71)||(48973232-48973303)
chr1 (7-75)||(9119842-9119911)
chr1 (1-75)||(1061459-1061534)
chr1 (5-71)||(34532713-34532780)
chr1 (5-75)||(14312813-14312884)
chr1 (1-75)||(25889499-25889574)
chr1 (5-66)||(1061366-1061428)
chr1 (5-74)||(1873862-1873932)
chr1 (1-43)||(26056187-26056229)
chr1 (5-75)||(9123406-9123477)
chr1 (1-44)||(42248344-42248387)
chr1 (1-74)||(1872971-1873045)
chr1 (1-43)||(3979353-3979395)
chr1 (1-43)||(13641291-13641333)
chr1 (1-43)||(25786002-25786044)
chr1 (1-42)||(25787205-25787246)
chr1 (1-65)||(44977255-44977320)
chr1 (1-41)||(9633809-9633849)
chr1 (1-60)||(14071225-14071285)
chr1 (1-41)||(26054931-26054971)
chr1 (1-52)||(48974436-48974488)
chr1 (1-43)||(13929329-13929371)
chr1 (1-43)||(13930715-13930757)
chr1 (5-43)||(50679861-50679899)
chr1 (1-43)||(52743016-52743058)
chr1 (1-42)||(47411018-47411059)
chr1 (1-42)||(49139835-49139876)
chr1 (1-42)||(51424285-51424326)
chr1 (5-57)||(52741526-52741579)
chr1 (1-41)||(14390292-14390332)
chr1 (32-75)||(27689348-27689392)
chr1 (1-76)||(29001128-29001204)
chr1 (32-75)||(34654347-34654391)
chr1 (7-43)||(36511371-36511407)
chr1 (1-41)||(47136729-47136769)
chr1 (7-43)||(47411488-47411524)
chr1 (1-45)||(47560173-47560217)
[»] chr6 (19 HSPs)
chr6 (5-75)||(2138644-2138715)
chr6 (1-75)||(8447255-8447330)
chr6 (1-75)||(8456059-8456134)
chr6 (1-75)||(19368525-19368600)
chr6 (1-74)||(28225458-28225532)
chr6 (1-73)||(19367751-19367824)
chr6 (5-73)||(26584046-26584115)
chr6 (1-74)||(28226426-28226500)
chr6 (5-73)||(13176342-13176411)
chr6 (1-43)||(22299943-22299985)
chr6 (5-42)||(13173075-13173112)
chr6 (7-43)||(9927646-9927682)
chr6 (1-44)||(5311313-5311356)
chr6 (1-75)||(18773688-18773763)
chr6 (5-75)||(26581991-26582061)
chr6 (1-43)||(8412356-8412398)
chr6 (1-43)||(31738397-31738439)
chr6 (1-43)||(31740312-31740354)
chr6 (1-42)||(8411120-8411161)
[»] chr2 (29 HSPs)
chr2 (1-75)||(2305574-2305649)
chr2 (1-75)||(2306668-2306743)
chr2 (1-75)||(4630091-4630166)
chr2 (1-75)||(33836803-33836878)
chr2 (1-75)||(3254890-3254965)
chr2 (5-75)||(33837762-33837833)
chr2 (1-75)||(3255885-3255960)
chr2 (1-75)||(41312534-41312609)
chr2 (1-66)||(3665258-3665324)
chr2 (1-43)||(12852920-12852962)
chr2 (1-73)||(3666277-3666350)
chr2 (5-73)||(41313276-41313345)
chr2 (1-41)||(6706960-6707000)
chr2 (1-43)||(7038372-7038414)
chr2 (1-43)||(12854144-12854186)
chr2 (1-43)||(41795992-41796034)
chr2 (1-43)||(42368348-42368390)
chr2 (1-43)||(23177707-23177750)
chr2 (1-43)||(23588964-23589007)
chr2 (1-43)||(2581837-2581879)
chr2 (1-43)||(5564093-5564135)
chr2 (1-43)||(5565185-5565227)
chr2 (7-41)||(15650481-15650515)
chr2 (1-43)||(21012120-21012162)
chr2 (1-43)||(37867790-37867832)
chr2 (1-42)||(35799546-35799587)
chr2 (7-43)||(12958456-12958492)
chr2 (1-37)||(14573854-14573890)
chr2 (1-60)||(37869062-37869122)
[»] chr4 (43 HSPs)
chr4 (5-75)||(52880852-52880923)
chr4 (1-60)||(21104332-21104392)
chr4 (1-75)||(526726-526801)
chr4 (1-75)||(2310789-2310864)
chr4 (1-75)||(29833406-29833481)
chr4 (1-75)||(30672071-30672146)
chr4 (1-65)||(12396891-12396956)
chr4 (1-72)||(19049882-19049954)
chr4 (1-75)||(15445470-15445545)
chr4 (1-75)||(29686290-29686365)
chr4 (1-75)||(30671028-30671103)
chr4 (1-43)||(15787542-15787584)
chr4 (1-73)||(29834441-29834514)
chr4 (5-73)||(52881939-52882008)
chr4 (1-52)||(937128-937180)
chr4 (1-60)||(39592311-39592371)
chr4 (1-44)||(53400219-53400262)
chr4 (1-44)||(56001307-56001350)
chr4 (1-43)||(11115020-11115062)
chr4 (1-43)||(28103526-28103568)
chr4 (1-43)||(30683067-30683109)
chr4 (1-43)||(33377404-33377446)
chr4 (1-43)||(37560339-37560381)
chr4 (5-43)||(46796066-46796104)
chr4 (1-61)||(96702-96763)
chr4 (7-43)||(1273473-1273509)
chr4 (1-41)||(5688679-5688719)
chr4 (1-60)||(6616233-6616293)
chr4 (1-45)||(44128372-44128416)
chr4 (1-44)||(44305018-44305061)
chr4 (1-75)||(44690862-44690937)
chr4 (1-44)||(56000321-56000364)
chr4 (1-43)||(15786986-15787028)
chr4 (1-43)||(37559032-37559074)
chr4 (1-39)||(40143688-40143726)
chr4 (1-43)||(47668637-47668679)
chr4 (1-42)||(11113776-11113817)
chr4 (1-42)||(30682754-30682795)
chr4 (1-42)||(31711126-31711167)
chr4 (1-42)||(43894139-43894180)
chr4 (1-42)||(48207758-48207799)
chr4 (1-60)||(39590975-39591035)
chr4 (1-56)||(52981176-52981232)
[»] scaffold0038 (2 HSPs)
scaffold0038 (1-74)||(25956-26030)
scaffold0038 (1-74)||(26924-26998)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-75)||(72993-73068)
[»] scaffold0155 (1 HSPs)
scaffold0155 (6-75)||(5208-5278)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-75)||(458467-458538)
[»] scaffold1827 (1 HSPs)
scaffold1827 (7-75)||(1066-1135)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-44)||(56739-56782)
[»] scaffold0178 (2 HSPs)
scaffold0178 (1-43)||(2305-2347)
scaffold0178 (1-42)||(1245-1286)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-43)||(39941-39983)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-43)||(23440-23482)
scaffold0046 (1-53)||(24844-24897)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-39)||(96194-96232)
[»] scaffold2127 (1 HSPs)
scaffold2127 (1-41)||(557-597)
[»] scaffold1974 (1 HSPs)
scaffold1974 (7-43)||(668-704)
[»] scaffold1878 (1 HSPs)
scaffold1878 (7-43)||(570-606)
[»] scaffold0290 (1 HSPs)
scaffold0290 (7-43)||(9518-9554)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 1e-83; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 76 - 232
Target Start/End: Original strand, 42949371 - 42949527
Alignment:
Q  76 tatcttgggttattgactcactcatgtacatgttttgagagtttgaacctcggtccccgtaactcattttcaacaattttaattttgatattcaattatc 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42949371 tatcttgggttattgactcactcatgtacatgttttgagagtttgaacctcggtccccgtaactcattttcaacaattttaattttgatattcaattatc 42949470  T
Q  176 tgcacgaggcaagagctttatctcttgagggttgttttcaatttatcacttgttctt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42949471 tgcacgaggcaagagctttatctcttgagggttgttttcaatttatcacttgttctt 42949527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4566985 - 4567058
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4566985 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtc 4567058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 15510345 - 15510270
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  15510345 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcct 15510270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 22650710 - 22650635
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  22650710 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcct 22650635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 15509233 - 15509304
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  15509233 attttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctattttggtcct 15509304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 20988724 - 20988799
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| |||||||||||||| ||| |||||||||| || |||||||||| ||||||||    
T  20988724 tttcattttggtcccctaactataaagtgtctcaatttagtctcttatgtcttgtgccgttacctcttttggtcct 20988799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 20991731 - 20991656
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  20991731 tttcattttggccccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcct 20991656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32522004 - 32521929
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||||||||||||||  |||||||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  32522004 tttcattttggtcccctaactatagagtgtctcaatttggtcccttgtgtcttttgtcgttacctcttttggtcct 32521929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4568056 - 4567983
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |||||| | ||||||    
T  4568056 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgcctttacctattttggtc 4567983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 32521724 - 32521793
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||| || |||||||||| ||||||    
T  32521724 attttggtcccctaactataaagtgtctcaatttgatccattatgtcttttgccgttacctcttttggtc 32521793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 21387671 - 21387746
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| || |||||||||||||| || ||  ||||||| |||||||||| ||||||||    
T  21387671 tttcattttggtcccctaactataaaatgtctcaatttggtcccataaatcttctgccgttacctcttttggtcct 21387746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12936184 - 12936142
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  12936184 tttcattttggtcccctaactataaagtgtctcaatttggtcc 12936142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12950342 - 12950300
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  12950342 tttcattttggtcccctaactataaagtgtctcaatttggtcc 12950300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 224672 - 224631
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  224672 tttcattttggtcccctaactataaagtgtctcaatttggtc 224631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 42949552 - 42949592
Alignment:
Q  192 tttatctcttgagggttgttttcaatttatcacttgttctt 232  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  42949552 tttatcttttgagggttgttttcaatttatcacttgttctt 42949592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7345472 - 7345430
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  7345472 tttcattttggtcctctaactataaagtgtctcaatttggtcc 7345430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15615042 - 15615002
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  15615042 tttcattttggtccgctaactataaagtgtctcaatttggt 15615002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 18693736 - 18693807
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||| || ||||||||| |||| || ||  |||||||||||||||||| ||||||||    
T  18693736 attttggtcccttaactataaaatgtctcaatctggtcccataaatcttctgtcgttacctcttttggtcct 18693807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5061062 - 5061104
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||||||||  || |||||||||||||||||||    
T  5061062 tttcattttggtcccctaatgataaagtgtctcaatttggtcc 5061104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5062268 - 5062226
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||||||||  || |||||||||||||||||||    
T  5062268 tttcattttggtcccctaatgataaagtgtctcaatttggtcc 5062226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5384428 - 5384386
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  5384428 tttcaatttgatcccctaactataaagtgtctcaatttggtcc 5384386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12933785 - 12933823
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  12933785 tttcattttgatcccctaactataaagtgtctcaatttg 12933823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12947946 - 12947984
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  12947946 tttcattttgatcccctaactataaagtgtctcaatttg 12947984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15613539 - 15613581
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||  |||||||| |||||||||||||||||||    
T  15613539 tttcattttggtcttctaactataaagtgtctcaatttggtcc 15613581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18678010 - 18678052
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  18678010 tttcactttgatcccctaactataaagtgtctcaatttggtcc 18678052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42510148 - 42510190
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  42510148 tttcagtttggtcccttaactataaagtgtctcaatttggtcc 42510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 42979482 - 42979524
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||| |||||||| |||||| ||||||||||||    
T  42979482 tttcattttggtcctctaactataaagtgtttcaatttggtcc 42979524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 5975794 - 5975831
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  5975794 attttggtcccctaattataaagtgtctcaatttggtc 5975831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19524017 - 19524058
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||    
T  19524017 tttcaatttggtcccttaactataaagtgtctcaatttggtc 19524058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19525370 - 19525329
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||    
T  19525370 tttcaatttggtcccctaactataaagtgtctccatttggtc 19525329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27894105 - 27894064
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||||||||||||||||| |||||| |||||||||||    
T  27894105 tttcactttggtcccctaactataaagtgtttcaatttggtc 27894064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42980791 - 42980750
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||  ||||||| ||||||||||||||||||    
T  42980791 tttcattttggtcctataactataaagtgtctcaatttggtc 42980750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 2851171 - 2851322
Alignment:
Q  76 tatcttgggttattgactc-actcatgtacatgttttgagagtttgaacctcggtccccgtaactcattttcaacaattttaattttgatattcaattat 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2851171 tatcttgggttattgactccactcatgtacatgttttgagagtttgaacctcagtccccataactcattttcaacaattttaaatttgatattcaattat 2851270  T
Q  175 ctgcacgaggcaagagctttatctcttgagggttgttttcaatttatcacttgtt 229  Q
    |||||| || ||| | |||||||||||| ||   ||||||||||| |||||||||    
T  2851271 ctgcacaagtcaaaatctttatctcttgtgg---gttttcaatttctcacttgtt 2851322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 76 - 229
Target Start/End: Original strand, 2903203 - 2903354
Alignment:
Q  76 tatcttgggttattgactc-actcatgtacatgttttgagagtttgaacctcggtccccgtaactcattttcaacaattttaattttgatattcaattat 174  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  2903203 tatcttgggttattgactccactcatgtacatgttttgagagtttgaacctcagtccccataactcattttcaacaattttaaatttgatattcaattat 2903302  T
Q  175 ctgcacgaggcaagagctttatctcttgagggttgttttcaatttatcacttgtt 229  Q
    |||||| || ||| | |||||||||||| ||   ||||||||||| |||||||||    
T  2903303 ctgcacaagtcaaaatctttatctcttgtgg---gttttcaatttctcacttgtt 2903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10053826 - 10053754
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggt 72  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| |||||    
T  10053826 tttcactttggtcccttaactataaagtgtctcaagttggtcccttatgtcttatgtcgttacctcttttggt 10053754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24068364 - 24068406
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  24068364 tttcattttggtcccctaactataaagtgtctcaatttggtcc 24068406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10052138 - 10052211
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||| ||||||||| |||| |||||||||| ||||||    
T  10052138 tttcactttggtcccctaattataaagtgtctcaaattggtcccttatgtcatctgccgttacctcttttggtc 10052211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 6843793 - 6843864
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtc--gttacctctattggtc 73  Q
    ||||||||||||||||||| ||||||||||||||||| || ||| |||||||||  ||||||||| ||||||    
T  6843793 attttggtcccctaactataaagtgtctcaatttggtcccctatatcttctgtcgtgttacctcttttggtc 6843864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 6844655 - 6844580
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||| ||||||| || ||||||||||||||||| |||||||| || || ||||| |||| ||||||||    
T  6844655 tttcattttggttccctaacaataaagtgtctcaatttggtcccttatgttttttgccgttatctcttttggtcct 6844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 38591089 - 38591047
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  38591089 tttcaatttggtcccctaactataaagtgtctcaatttggtcc 38591047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41867998 - 41867956
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  41867998 tttcactttggtcccctaactataaagtgtctcaatttggtcc 41867956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 21267198 - 21267241
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||    
T  21267198 tttcactttggtcctctaactataaagtgtctcaatttggtcct 21267241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37474118 - 37474075
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||    
T  37474118 tttcaatttggtcccttaactataaagtgtctcaatttggtcct 37474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24069528 - 24069486
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| |||| ||||||| |||||||||||||||||||    
T  24069528 tttcattttgatcccttaactataaagtgtctcaatttggtcc 24069486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29739725 - 29739683
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  29739725 tttcaatttgatcccctaactataaagtgtctcaatttggtcc 29739683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31623940 - 31623982
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||    
T  31623940 tttcaatttggtcccctaactataaagtgtttcaatttggtcc 31623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31625466 - 31625424
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||    
T  31625466 tttcaatttggtcccctaattataaagtgtctcaatttggtcc 31625424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36070212 - 36070250
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  36070212 tttcaatttggtcccctaactataaagtgtctcaatttg 36070250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37274921 - 37274959
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  37274921 tttcattttggtcctctaactataaagtgtctcaatttg 37274959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43386784 - 43386742
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  43386784 tttcagtttggtcccctaactataaaatgtctcaatttggtcc 43386742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39515233 - 39515274
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    |||||||||| |||||| ||||| ||||||||||||||||||    
T  39515233 tttcattttgatcccctgactataaagtgtctcaatttggtc 39515274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 8095386 - 8095422
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  8095386 tttggtcccttaactattaagtgtctcaatttggtcc 8095422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 14820233 - 14820269
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  14820233 tttggtcccctaactataaagtgtctcaatttagtcc 14820269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 37472443 - 37472479
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||| |||||||| |||||||||||||||||||    
T  37472443 tttggtcctctaactataaagtgtctcaatttggtcc 37472479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 43277997 - 43277961
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| || ||||||||||||||||    
T  43277997 tttggtcccctaactataaaatgtctcaatttggtcc 43277961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41126273 - 41126348
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41126273 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 41126348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30222680 - 30222755
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  30222680 tttcattttggtcccctaattataaagtatctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 30222755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 36673914 - 36673843
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  36673914 attttggtcccctaactataaaatgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 36673843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41618581 - 41618506
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  41618581 tttcattttggtcccctaattataaagtgtctaaatttggtccattatgtcttctgtcgttacctcttttggtcct 41618506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30224058 - 30223983
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||| ||| ||||||||    
T  30224058 tttcattttggtcccctaactataaattgtctcaatttggtcccttatgtcttctgccgttacatcttttggtcct 30223983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 34558383 - 34558308
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||| || |||||||||| ||||||||    
T  34558383 tttcattttggtcccctaactataaagtatctcaatttggtcccttatgtcttttgccgttacctcttttggtcct 34558308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41616658 - 41616733
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| ||| ||||    
T  41616658 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatctcttttgatcct 41616733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 41127253 - 41127178
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| |||| |||||||||||||| ||||||||| || |||||| ||| ||||||||    
T  41127253 tttcattttggtcccctaactataaagtatctcaatttggtcctttatgtcttttgccgttacatcttttggtcct 41127178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38001538 - 38001611
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    |||||||||||||| |||||||| |||||| |||||||||| ||||||||||| |||||||| |||| ||||||    
T  38001538 tttcattttggtcctctaactataaagtgtttcaatttggtcccttatgtcttttgtcgttatctcttttggtc 38001611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2904129 - 2904054
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaattt-ggtccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| || ||||||||||| | |  |||||||||||| |||||||||| ||||||||    
T  2904129 tttcattttggtcccctaactataaaatgtctcaatttagtttgttatgtcttctgccgttacctcttttggtcct 2904054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35480242 - 35480316
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||||||| |||||||||||||| || ||||||||||| || |||||||||| ||||||||    
T  35480242 tttcattttggtccc-taactataaagtgtctcaatttagtcccttatgtcttttgccgttacctcttttggtcct 35480316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18801249 - 18801291
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  18801249 tttcattttggtcccctaactataaagtgtctcaatttggtcc 18801291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 34557435 - 34557483
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtctt 52  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  34557435 attttggtcccctaactataaagtgtctcaatttggtcccttatgtctt 34557483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45721848 - 45721808
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  45721848 tttcattttggtcccctaactataaagtgtctcaatttggt 45721808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7345948 - 7346023
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||| ||| || ||||| |||||||| |||||| |||| ||||||||||||| ||||||||    
T  7345948 tttcattttggtcccataaatataaactgtcttaatttggtcccttatttcttttgtcgttacctcttttggtcct 7346023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 33341336 - 33341407
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||| | ||||||| || |||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  33341336 attttggtctcataactataaattgtctcaatttggtccattatgtcttttgccgttacctcttttggtcct 33341407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38002596 - 38002521
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||| | ||  |||||| ||||| ||||||||    
T  38002596 tttcattttggtcccttaactataaagtgtctcaatttggtcccttatctttttggtcgtttcctcttttggtcct 38002521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38408356 - 38408281
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||| |||||||| |||||||| ||||||||||| ||||| |||||||||||||| ||||| || | ||||||||    
T  38408356 tttcactttggtcctctaactataaagtgtctcaaattggtcccttatgtcttctgccgttatctattttggtcct 38408281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40926601 - 40926558
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  40926601 tttcactttggtcccctaactataaagtgtctcaatttggtcct 40926558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 17288298 - 17288260
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17288298 attttggtcccctaactataaagtgtctcaatttggtcc 17288260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19279694 - 19279652
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  19279694 tttcactttggtcccctaactataaagtgtctcaatttggtcc 19279652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19848916 - 19848874
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  19848916 tttcattttggtcccttaactataaagtgtctcaatttggtcc 19848874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25153692 - 25153734
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  25153692 tttcaatttggtcccctaactataaagtgtctcaatttggtcc 25153734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33459625 - 33459583
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||| |||||||| |||||||||||||||||||    
T  33459625 tttcattttggtcctctaactataaagtgtctcaatttggtcc 33459583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43006419 - 43006461
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  43006419 tttcaatttggtcccctaactattaagtgtctcaatttggtcc 43006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7146814 - 7146859
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcctta 46  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||||    
T  7146814 tttcaatttggtcccctaactataaagtgtttcaatttggtcctta 7146859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43935219 - 43935260
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  43935219 tttcattttggtcctctaactataaagtgtctcaatttggtc 43935260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14107866 - 14107926
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtt 60  Q
    ||||||||||||||| ||||||| |||||||||||  |||| |||||| ||||||||||||    
T  14107866 tttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14107926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 14417823 - 14417883
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtt 60  Q
    ||||||||||||||| ||||||| |||||||||||  |||| |||||| ||||||||||||    
T  14417823 tttcattttggtcccttaactataaagtgtctcaaagtggtcccttatatcttctgtcgtt 14417883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18802471 - 18802429
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| |||||||||||| |||||||||||||| ||||    
T  18802471 tttcattttgatcccctaactataaagtgtctcaatttagtcc 18802429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19278387 - 19278429
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||    
T  19278387 tttcattttggtcccttaattataaagtgtctcaatttggtcc 19278429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22746402 - 22746360
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||    
T  22746402 tttcaatttagtcccctaactataaagtgtctcaatttggtcc 22746360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24873679 - 24873637
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| | |||||||||| |||||||||||||||||||    
T  24873679 tttcattttgatgccctaactataaagtgtctcaatttggtcc 24873637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38406052 - 38406086
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaa 35  Q
    ||||||||||||||||||||||| |||||||||||    
T  38406052 tttcattttggtcccctaactataaagtgtctcaa 38406086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 40930452 - 40930494
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||    
T  40930452 tttcactttggtcccctaactataaagtgtttcaatttggtcc 40930494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 41516422 - 41516384
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  41516422 attttggtcccctaactataaagtgtcttaatttggtcc 41516384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43007731 - 43007689
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  43007731 tttcaatttggtcctctaactataaagtgtctcaatttggtcc 43007689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 46458795 - 46458753
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  46458795 tttcaatttggtcccttaactataaagtgtctcaatttggtcc 46458753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2903078 - 2903130
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtctt 52  Q
    |||||||||| |  ||||||||| ||||||||||||||||| |||||||||||    
T  2903078 tttcattttgatttcctaactataaagtgtctcaatttggtcccttatgtctt 2903130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38779011 - 38779047
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatt 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  38779011 tttcattttggtcccctaactataaagtgtcacaatt 38779047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 43930353 - 43930413
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct-tatgtcttctgtcgtt 60  Q
    ||||| ||||||||||||||||| ||  |||||||||||||||| ||  ||||||||||||    
T  43930353 tttcactttggtcccctaactattaaacgtctcaatttggtcctataaatcttctgtcgtt 43930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 53047931 - 53048006
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  53047931 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 53048006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 52293605 - 52293530
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  52293605 tttcattttggtcccctaactataaagtgtctcaatttggtcctttatgtcttctatcgttacctcttttggtcct 52293530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 53049115 - 53049044
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  53049115 attttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 53049044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 55443632 - 55443558
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  55443632 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcc 55443558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32974305 - 32974232
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  32974305 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtc 32974232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 53342750 - 53342822
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggt 72  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  53342750 tttcattttggtcccctaactataaagtgtctcaatttggtccattatgtcttttgtcgttacctcttttggt 53342822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32973173 - 32973248
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| || |||||    
T  32973173 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctctttttgtcct 32973248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39133051 - 39133126
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| ||||||||    
T  39133051 tttcaatttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctctcgttacctcttttggtcct 39133126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39287504 - 39287579
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  39287504 tttcattttggtcctctaactataaagtgtctcaatttggtcccttatgttttctgtcgttacctcttttggtcct 39287579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48035406 - 48035331
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  48035406 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgccgttacctcttttggtcct 48035331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5416232 - 5416306
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||||| |||||||    
T  5416232 tttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcc 5416306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19579376 - 19579310
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctct 66  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  19579376 tttcattttggtcccttaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctct 19579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39288521 - 39288449
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggt 72  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||||    
T  39288521 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttatgtcgttatctcttttggt 39288449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 52705390 - 52705324
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctct 66  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||    
T  52705390 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttacctct 52705324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 52292628 - 52292701
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| |||||||||||||| || || |||||||| ||||||||||||| ||||||    
T  52292628 tttcattttggtcccctaactataaagtgtctcaatttagtcccgtatgtcttttgtcgttacctcttttggtc 52292701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 5417130 - 5417057
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||  ||||| ||||||||||| ||| ||||||||| ||||||    
T  5417130 tttcattttggtcccctaactataaagtgtctcagattggtcccttatgtcttttgttgttacctcttttggtc 5417057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 7583504 - 7583577
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtc 73  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||| |  |||||||||| ||||||    
T  7583504 tttcattttggtccactaactataaagtgtctcaatttggtctcttatgtcttttaccgttacctcttttggtc 7583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 48825850 - 48825911
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctc 65  Q
    |||||| | |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  48825850 attttgattccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctc 48825911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 55442628 - 55442701
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||| ||||||| | ||||||    
T  55442628 tttcattttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgttgttaccttttttggtc 55442701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 11220740 - 11220680
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct-tatgtcttctgtcgtt 60  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||    
T  11220740 tttcattttggtcccctaactataaagtgtctcaatttggtcctataaatcttctgtcgtt 11220680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 1301070 - 1301141
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||| ||||||||||||||||| ||||||||||| |  |||||||||| ||||||||    
T  1301070 attttggtcccataactataaagtgtctcaatttggtcccttatgtcttttaccgttacctcttttggtcct 1301141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17350184 - 17350109
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||   ||||||||| ||||||||    
T  17350184 tttcaatttgttcccctaactataaagtgtctcaatttggtcccttatgtcttctcctgttacctcttttggtcct 17350109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 40502293 - 40502222
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| |||| |||||||||  ||| ||||||||| ||||||||||||| ||||||||    
T  40502293 attttggtcccctaactataaagtatctcaatttaatcccttatgtcttttgtcgttacctcttttggtcct 40502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8372698 - 8372656
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  8372698 tttcattttggtcccctaactataaagtgtctcaatttggtcc 8372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10987735 - 10987693
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  10987735 tttcattttggtcccctaactataaagtgtctcaatttggtcc 10987693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11219464 - 11219505
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  11219464 tttcattttggtcccctaactataaagtgtctcaatttggtc 11219505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11483069 - 11482996
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||| ||||||| |||||||| |||||| || |||||||||| |||||||| |||| ||||||    
T  11483069 tttcattttggtcccttaactataaagtgtcttaatttgatctcttatgtcttttgtcgttatctcttttggtc 11482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 7822064 - 7821996
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggt 72  Q
    ||||||||| ||||| ||| ||||||||||||||||| ||||||||||| || |||||||||| |||||    
T  7822064 attttggtctcctaattataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggt 7821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 19579254 - 19579305
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtct 51  Q
    ||||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  19579254 tttcattttggtcccctaactataaaatgtctcaatttggtccgttatgtct 19579305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 48252971 - 48253009
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  48252971 attttggtcccctaactataaagtgtctcaatttggtcc 48253009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 51401433 - 51401391
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  51401433 tttcactttggtcccctaactataaagtgtctcaatttggtcc 51401391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54654048 - 54654006
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  54654048 tttcattttggtcccttaactataaagtgtctcaatttggtcc 54654006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19623001 - 19622940
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtta 61  Q
    ||||| ||||||| ||||||||| |||||||||||  |||| ||||||||||||||||||||    
T  19623001 tttcactttggtctcctaactataaagtgtctcaaactggtcccttatgtcttctgtcgtta 19622940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 40501846 - 40501915
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||| ||||||||| || | |||||||||||| ||||||||||| || |||||||||| ||||||    
T  40501846 attttggtcacctaactataaaatatctcaatttggtcccttatgtcttttgccgttacctcttttggtc 40501915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8371254 - 8371294
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||||||||||| || ||||||||||||||    
T  8371254 tttcattttggtcccctaactataaaatgtctcaatttggt 8371294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41386164 - 41386204
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  41386164 tttcaatttggtcccctaactataaagtgtctcaatttggt 41386204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 11481959 - 11482010
Alignment:
Q  25 aagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  11481959 aagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcct 11482010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 32980534 - 32980491
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||    
T  32980534 tttcaatttggtcccctaactacaaagtgtctcaatttggtcct 32980491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 47855420 - 47855377
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||||||||||||  ||||||| ||||||||||||||||||||    
T  47855420 tttcattttggtccgttaactataaagtgtctcaatttggtcct 47855377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 54752650 - 54752693
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  54752650 tttcaatttagtcccctaactataaagtgtctcaatttggtcct 54752693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12062466 - 12062424
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  12062466 tttcagtttggtcccttaactattaagtgtctcaatttggtcc 12062424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 26798984 - 26798946
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  26798984 attttggtcccctaactataaaatgtctcaatttggtcc 26798946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29536748 - 29536790
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| ||| |||||||| |||||||||||||||||||    
T  29536748 tttcattttgatcctctaactataaagtgtctcaatttggtcc 29536790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32979122 - 32979160
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  32979122 tttcattttggtcctctaactataaagtgtctcaatttg 32979160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33563983 - 33564021
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  33563983 tttcattttagtcccctaactataaagtgtctcaatttg 33564021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41387515 - 41387473
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  41387515 tttcaatttggtcccctaactataaaatgtctcaatttggtcc 41387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42632740 - 42632778
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  42632740 tttcaatttggtcccctaactataaagtgtctcaatttg 42632778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42633968 - 42633926
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||||||||||||||||  ||||||||||||||||||    
T  42633968 tttcaatttggtcccctaactatagagtgtctcaatttggtcc 42633926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 43101928 - 43101970
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||| |||| ||| |||||||||||||||||||    
T  43101928 tttcattttggtcctctaattataaagtgtctcaatttggtcc 43101970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47767032 - 47766991
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  47767032 tttcattttggtccc-taactataaagtgtctcaatttggtcc 47766991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 19622039 - 19622076
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaattt 38  Q
    ||||| ||||||||||||||||| ||||||||||||||    
T  19622039 tttcactttggtcccctaactataaagtgtctcaattt 19622076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 48034047 - 48034115
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtc 73  Q
    |||||||||| |||||||| ||||||||||||||| || ||||||| ||||  |||||||||| ||||||    
T  48034047 attttggtcctctaactataaagtgtctcaatttgatctcttatgttttct-ccgttacctcttttggtc 48034115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49122084 - 49122043
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||| | ||||||| ||||||||||||||||||    
T  49122084 tttcattttggtctcttaactataaagtgtctcaatttggtc 49122043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1789 - 1864
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1789 tttcattttggtcccctaattataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 1864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2236847 - 2236922
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  2236847 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttgatcct 2236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2238060 - 2237985
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  2238060 tttcattttggtcccataactataaagtgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 2237985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35683089 - 35683164
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  35683089 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcct 35683164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 48935192 - 48935119
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  48935192 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtc 48935119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 34531697 - 34531772
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||||| |||| ||||||||    
T  34531697 tttcattttggtcctctaactataaaatgtctcaatttggtctcttatgtcttctgtcgttatctcttttggtcct 34531772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 35684280 - 35684210
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  35684280 attttggtcccctaactataaa-tgtctcaatttggtcccttatgtcttctgtcgttacctcttttggtcct 35684210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 48934275 - 48934350
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||  || |||||||||| ||||||||    
T  48934275 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtctattgacgttacctcttttggtcct 48934350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48973232 - 48973303
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattgg 71  Q
    ||||||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| ||||    
T  48973232 tttcattttagtcccctaactataaagtgtctcaatttgatcccttatgtcttctgtcgttacctcttttgg 48973303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 9119842 - 9119911
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    
T  9119842 tttggtcctctaactataaagtgtctcaatttggtccgttatgtcttttgtcgttacctcttttggtcct 9119911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 1061534 - 1061459
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||| ||||||||||||| |||||||| ||||||||| |||||||||| || |||||||||| ||||||||    
T  1061534 tttcattttagtcccctaactataaagtgtcttaatttggtcacttatgtcttttgccgttacctcttttggtcct 1061459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 34532780 - 34532713
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattgg 71  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||    
T  34532780 attttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttgg 34532713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 14312813 - 14312884
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||| |||| |||| ||||||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  14312813 attttggtctcctagctataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggtcct 14312884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25889574 - 25889499
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||| |||||| ||||| | |||||||||||||||| ||||||||||||  |||||||||| ||||||||    
T  25889574 tttcattttgatccccttactataatgtgtctcaatttggtcacttatgtcttcttccgttacctcttttggtcct 25889499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 1061366 - 1061428
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctct 66  Q
    |||||||||||| |||||| ||||||||||||||||| |||||||| || |||||||||||||    
T  1061366 attttggtccccaaactataaagtgtctcaatttggtcccttatgttttttgtcgttacctct 1061428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 1873932 - 1873862
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||| || |||||||| | |||||||    
T  1873932 attttggtcccctaactataaagtgtctcaatttgatcccttatgtcttttgccgttaccttttttggtcc 1873862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26056229 - 26056187
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  26056229 tttcattttggtcccctaactataaagtgtctcaatttggtcc 26056187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 9123477 - 9123406
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||| |||||| ||||||||| || ||||||||| ||||||||||||| || |||||    
T  9123477 attttggtcccttaactataaagtgtttcaatttggaccgttatgtcttttgtcgttacctctttttgtcct 9123406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 42248387 - 42248344
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  42248387 tttcattttggtcccataactataaagtgtctcaatttggtcct 42248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1872971 - 1873045
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||| ||||| ||  |||||||| |||||||| ||||||||||| || |||||||||| |||||||    
T  1872971 tttcattttggtctcctaattaaaaagtgtcttaatttggtcccttatgtcttttgccgttacctcttttggtcc 1873045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3979395 - 3979353
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  3979395 tttcattttggtcccttaactataaagtgtctcaatttggtcc 3979353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13641291 - 13641333
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  13641291 tttcactttggtcccctaactataaagtgtctcaatttggtcc 13641333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25786002 - 25786044
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  25786002 tttcaatttggtcccctaactataaagtgtctcaatttggtcc 25786044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25787246 - 25787205
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||||||||||||||||| ||||||||||||||||||    
T  25787246 tttcaatttggtcccctaactataaagtgtctcaatttggtc 25787205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44977255 - 44977320
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctc 65  Q
    ||||| ||||||||||||||||| |||||||| ||  |||| |||||||||||||| |||||||||    
T  44977255 tttcactttggtcccctaactataaagtgtcttaaactggtcccttatgtcttctgccgttacctc 44977320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9633809 - 9633849
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  9633809 tttcattttggtcccttaactataaagtgtctcaatttggt 9633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 14071285 - 14071225
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtt 60  Q
    ||||| |||||||| |||||||| ||||||||||||||||| || || |||||||||||||    
T  14071285 tttcaatttggtcctctaactataaagtgtctcaatttggtcccataagtcttctgtcgtt 14071225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26054931 - 26054971
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  26054931 tttcattttggtcccctaactataaagtgtttcaatttggt 26054971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48974488 - 48974436
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtctt 52  Q
    |||||||||||| |||||||||| ||||||||||| ||||| |||||||||||    
T  48974488 tttcattttggttccctaactataaagtgtctcaacttggtcccttatgtctt 48974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 13929329 - 13929371
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  13929329 tttcaatttggtcccttaactataaagtgtctcaatttggtcc 13929371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 13930757 - 13930715
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  13930757 tttcaatttggtcctctaactataaagtgtctcaatttggtcc 13930715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 50679899 - 50679861
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  50679899 attttggtcccttaactataaagtgtctcaatttggtcc 50679861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 52743058 - 52743016
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  52743058 tttcactttggtcccctaactataaagtgtctcaaattggtcc 52743016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47411018 - 47411059
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  47411018 tttcaatttgatcccctaactataaagtgtctcaatttggtc 47411059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49139835 - 49139876
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    |||| |||||||||| ||||||| ||||||||||||||||||    
T  49139835 tttcgttttggtcccataactataaagtgtctcaatttggtc 49139876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51424285 - 51424326
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||    
T  51424285 tttcattttggtcccttaattataaagtgtctcaatttggtc 51424326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 52741526 - 52741579
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtc 57  Q
    |||||||||| |||||||| ||||||||||| ||| | ||||||||||||||||    
T  52741526 attttggtcctctaactataaagtgtctcaaattgatcccttatgtcttctgtc 52741579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14390292 - 14390332
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  14390292 tttcattttggtcctctaactataaaatgtctcaatttggt 14390332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 75
Target Start/End: Original strand, 27689348 - 27689392
Alignment:
Q  32 tcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||    
T  27689348 tcaatttggtctcttatgttttctgtcgttacctcttttggtcct 27689392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 29001204 - 29001128
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcctt 76  Q
    |||||||||||||||| |||| | ||  ||||||| ||||||| |||||| |||||||||||| | | |||||||||    
T  29001204 tttcattttggtccccaaactttaaaacgtctcaaattggtcccttatgtattctgtcgttacttatcttggtcctt 29001128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 75
Target Start/End: Complemental strand, 34654391 - 34654347
Alignment:
Q  32 tcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||    
T  34654391 tcaatttggtctcttatgtcttctaccgttacctctattggtcct 34654347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 36511407 - 36511371
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  36511407 tttggtcccttaactataaagtgtctcaatttggtcc 36511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 47136769 - 47136729
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||| || |||||||||||||| |||||||||||||||||    
T  47136769 tttcaattaggtcccctaactataaagtgtctcaatttggt 47136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 47411524 - 47411488
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||| |||||||||| |||||||||||||||||||    
T  47411524 tttggttccctaactataaagtgtctcaatttggtcc 47411488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47560173 - 47560217
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcctt 45  Q
    ||||| ||||||||||||||||| |||||| |||||||| |||||    
T  47560173 tttcactttggtcccctaactataaagtgtttcaatttgatcctt 47560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 2138715 - 2138644
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  2138715 attttggtcccctaactataaagtgtctcaatttagtcccttatgtcttctgtcgttacctcttttggtcct 2138644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8447255 - 8447330
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  8447255 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcct 8447330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8456059 - 8456134
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||| ||||||||    
T  8456059 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgccgttacctcttttggtcct 8456134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 19368600 - 19368525
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  19368600 tttcattttggtcctctaactataaagtgtctcaatttggtctcttatgtcttctgtcgttacctcttttagtcct 19368525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28225458 - 28225532
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  ||| |||||||    
T  28225458 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatatcttttggtcc 28225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19367751 - 19367824
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||| | ||||||    
T  19367751 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgttgttaccttttttggtc 19367824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 26584115 - 26584046
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttgg-tccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||||||| ||||||    
T  26584115 attttggtcccctaactataaagtgtctcaatttggttccttatgtcttttgccgttacctcttttggtc 26584046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 28226500 - 28226426
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||| ||||||| || |||||||||| |||||||    
T  28226500 tttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtcc 28226426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 13176411 - 13176342
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtc 73  Q
    ||||| ||||||||||||| || |||||||||||||||  ||||||||| ||||||||||||| ||||||    
T  13176411 attttagtcccctaactataaaatgtctcaatttggtcttttatgtcttttgtcgttacctcttttggtc 13176342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22299985 - 22299943
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  22299985 tttcactttggtcccctaactataaagtgtctcaatttggtcc 22299943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 13173075 - 13173112
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  13173075 attttggtcccctaactataaagtgtctcaatttggtc 13173112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 9927646 - 9927682
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||||||||    
T  9927646 tttggtcccctaactataaagtgtctcaatttggtcc 9927682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 5311313 - 5311356
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  5311313 tttcaatttagtcccctaactataaagtgtctcaatttggtcct 5311356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18773688 - 18773763
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| || |||||||||||||| ||||||||| |||   ||||||| | ||||||||    
T  18773688 tttcattttggtcccctaattataaaatgtctcaatttggtcccttatgtcctctcgtgttaccttttttggtcct 18773763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 26581991 - 26582061
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||| ||||||| ||||| ||||||||||| |||||| |||| |||||||| |||| ||||||||    
T  26581991 attttggtcccttaactataaagtgactcaatttggtcccttatatcttttgtcgtta-ctcttttggtcct 26582061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8412398 - 8412356
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||    
T  8412398 tttcaatttagtcccctaactataaagtgtctcaatttggtcc 8412356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31738397 - 31738439
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||| ||||||||||||    
T  31738397 tttcaatttggtcccctaactataaagtgtttcaatttggtcc 31738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31740354 - 31740312
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||    
T  31740354 tttcaatttggtcccttaactataaagtgtctcaatttggtcc 31740312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8411120 - 8411161
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||    
T  8411120 tttcaatttagtcccctaactataaagtgtctcaatttggtc 8411161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 2305574 - 2305649
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||||||||    
T  2305574 tttcattttgatcccctaactataaagtgtctcaatttggtcccttatgtcttctgccgttacctcttttggtcct 2305649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2306743 - 2306668
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||| ||||||||    
T  2306743 tttcattttggtcccctaactgtaaagtgtctcaatttggtccattatgtcttctgccgttacctcttttggtcct 2306668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 4630166 - 4630091
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||| ||||||||    
T  4630166 tttcattttggtcccctaactataaagtgtctcaatttggtctcttatgtcttttgttgttacctcttttggtcct 4630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 33836803 - 33836878
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||| ||||||||    
T  33836803 tttcattttggtcccctaactataaagtgtctcaatttggtcatttatgtcttctatcgttacctcttttggtcct 33836878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3254890 - 3254965
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||| |||||| |||  |||||||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  3254890 tttcattttggttccctaattatagagtgtctcaatttggtcccttatgtcttttgtcgttacctcttttggtcct 3254965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 33837833 - 33837762
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||||||||||||||  | ||||||||||| ||||||||||||| ||||||||    
T  33837833 attttggtcccctaactataaagtgtctcaatttaatcccttatgtcttttgtcgttacctcttttggtcct 33837762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 3255960 - 3255885
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || ||||| |||  ||||||||    
T  3255960 tttcattttggtcccctaactataaagtgtttcaatttggtctcttatgtcttttgccgttatctcatttggtcct 3255885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41312534 - 41312609
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||| ||| |||||||| |||| ||||||||||||| |||||||||| || |||||||||| ||||||||    
T  41312534 tttcattttgttcctctaactataaagtatctcaatttggtctcttatgtcttatgccgttacctcttttggtcct 41312609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 3665258 - 3665324
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctct 66  Q
    |||||||||||||| |||||||| || ||| |||||||||| |||||||||||||| ||||||||||    
T  3665258 tttcattttggtcctctaactataaaatgtttcaatttggtcccttatgtcttctgccgttacctct 3665324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12852920 - 12852962
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  12852920 tttcattttggtcccctaactataaagtgtctcaatttggtcc 12852962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 3666350 - 3666277
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||    |||||||||| ||||||    
T  3666350 tttcattttggtcccataactataaagtgtctcaatttggtcccttatgtctttaaccgttacctcttttggtc 3666277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41313345 - 41313276
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||||||||| |||||||| |||||| | ||||||||||| || |||||||||| ||||||    
T  41313345 attttggtcccctaactataaagtgtctgaatttgatcccttatgtcttttgccgttacctcttttggtc 41313276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6706960 - 6707000
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6706960 tttcattttggtcccctaactataaagtgtctcaatttggt 6707000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 7038414 - 7038372
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  7038414 tttcattttggtcccttaactataaagtgtctcaatttggtcc 7038372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 12854186 - 12854144
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  12854186 tttcattttggtcccttaactataaagtgtctcaatttggtcc 12854144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41796034 - 41795992
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| |||||||||||| |||||||||||||||||||    
T  41796034 tttcattttgatcccctaactataaagtgtctcaatttggtcc 41795992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42368390 - 42368348
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  42368390 tttcattttggtcccctaactataaagtgtctcgatttggtcc 42368348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23177707 - 23177750
Alignment:
Q  1 tttcattttggtcccc-taactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  23177707 tttcattttggtccccctaactataaagtgtctcaatttggtcc 23177750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23588964 - 23589007
Alignment:
Q  1 tttcattttggtcccc-taactatgaagtgtctcaatttggtcc 43  Q
    |||||||||||||||| ||||||| |||||||||||||||||||    
T  23588964 tttcattttggtccccctaactataaagtgtctcaatttggtcc 23589007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2581837 - 2581879
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  2581837 tttcaatttgatcccctaactataaagtgtctcaatttggtcc 2581879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5564093 - 5564135
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||    
T  5564093 tttcattttggtcccttaattataaagtgtctcaatttggtcc 5564135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5565227 - 5565185
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||    
T  5565227 tttcattttggtcccttaattataaagtgtctcaatttggtcc 5565185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 15650481 - 15650515
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||||||||||||||| |||||||||||||||||    
T  15650481 tttggtcccctaactataaagtgtctcaatttggt 15650515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21012162 - 21012120
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| |||||||||||| |||||| ||||||||||||    
T  21012162 tttcattttgatcccctaactataaagtgtttcaatttggtcc 21012120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37867790 - 37867832
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  37867790 tttcaatttgatcccctaactataaagtgtctcaatttggtcc 37867832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 35799546 - 35799587
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||    
T  35799546 tttcaatttagtcccctaactataaagtgtctcaatttggtc 35799587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 12958456 - 12958492
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||| |||||||||||| |||||||||||||||||||    
T  12958456 tttgatcccctaactataaagtgtctcaatttggtcc 12958492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14573890 - 14573854
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatt 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  14573890 tttcattttggtcccctaactataaagtgtcacaatt 14573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 37869122 - 37869062
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgtt 60  Q
    ||||| ||||||||| ||||||| |||||||||||||| ||| | || |||||||||||||    
T  37869122 tttcaatttggtcccttaactataaagtgtctcaatttagtctcataagtcttctgtcgtt 37869062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 52880852 - 52880923
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||| || |||||||||| ||||||||    
T  52880852 attttggtcccctaactataaagtgtctcaatttggtcctttatgtcttttgccgttacctcttttggtcct 52880923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21104392 - 21104332
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgtt 60  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  21104392 tttcattttggtcccctaactataaagtgtctcaatttggtctcatatgtcttctgtcgtt 21104332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 526801 - 526726
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||  ||||||||| ||||||||    
T  526801 tttcattttggtcccctaactataaagtgtctcaacttggtcccttatgtcatctgatgttacctcttttggtcct 526726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2310864 - 2310789
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||||||||| || |||||||||| ||| ||||    
T  2310864 tttcattttggtcccctaactataaaatgtctcaatttggtcccttatgtcttttgccgttacctcttttgatcct 2310789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29833406 - 29833481
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| || |||||||||||||| |||||| |||| ||||||||||||| ||||||||    
T  29833406 tttcattttggtcccctaattataaaatgtctcaatttggtcccttatatcttttgtcgttacctcttttggtcct 29833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 30672146 - 30672071
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||| |||||||| | ||||||||    
T  30672146 tttcattttggtcccgtaactttaaagtgtctcaatttggtcccttatgtcttctgccgttacctgttttggtcct 30672071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 12396956 - 12396891
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctc 65  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||  || |||||||||    
T  12396956 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtctattgccgttacctc 12396891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19049954 - 19049882
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggt 72  Q
    |||||||||| |||||||| ||| ||||||||||||||||| ||||||||||| |||| |||||||| |||||    
T  19049954 tttcattttgatcccctaattataaagtgtctcaatttggtcccttatgtcttttgtcattacctcttttggt 19049882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 15445470 - 15445545
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||||| || ||||| || | ||||||||    
T  15445470 tttcattttggtcccctaattataaagtgtctcaatttggtctcttatgtcttttgccgttatcttttttggtcct 15445545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 29686290 - 29686365
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||| ||||||||| ||||||| || |||||||| ||||||| ||||||||| ||||||||||||| ||||||||    
T  29686290 tttcactttggtcccttaactataaattgtctcaaattggtcccttatgtcttatgtcgttacctcttttggtcct 29686365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 30671028 - 30671103
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||||||| |||||||||||||| ||| ||||| |||| ||||||||||||| ||| ||||    
T  30671028 tttcattttggtcccttaactataaagtgtctcaatttagtctcttatatcttttgtcgttacctcttttgatcct 30671103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15787584 - 15787542
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15787584 tttcattttggtcccctaactataaagtgtctcaatttggtcc 15787542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 29834514 - 29834441
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgttacctctattggtc 73  Q
    |||||||||| |||||||||||| | || |||||||||| ||| |||||||||||| |||||||||| ||||||    
T  29834514 tttcattttgatcccctaactataatgtatctcaatttgatcccttatgtcttctgccgttacctcttttggtc 29834441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 52882008 - 52881939
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtc 73  Q
    ||||||||||||| ||||| ||||||||||||| ||| ||||||||| | ||||||||||||| ||||||    
T  52882008 attttggtcccctgactataaagtgtctcaattaggtcccttatgtcatttgtcgttacctcttttggtc 52881939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 937180 - 937128
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtctt 52  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||||||    
T  937180 tttcattttggtcccctaactataaagtgtctcaatttagtcccttatgtctt 937128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 39592371 - 39592311
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc-ttatgtcttctgtcgtt 60  Q
    ||||| ||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  39592371 tttcactttagtcccctaactataaagtgtctcaaattggtccattatgtcttctgtcgtt 39592311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53400219 - 53400262
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  53400219 tttcattttggtcccataactataaagtgtctcaatttggtcct 53400262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 56001350 - 56001307
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  56001350 tttcattttggccccctaactataaagtgtctcaatttggtcct 56001307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11115062 - 11115020
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  11115062 tttcattttggtcccctaactataaagtatctcaatttggtcc 11115020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 28103568 - 28103526
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  28103568 tttcattttggtcccttaactataaagtgtctcaatttggtcc 28103526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 30683109 - 30683067
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  30683109 tttcattttggtcccttaactataaagtgtctcaatttggtcc 30683067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33377446 - 33377404
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  33377446 tttcaatttggtcccctaactataaagtgtctcaatttggtcc 33377404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37560381 - 37560339
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  37560381 tttcaatttggtcccctaactataaagtgtctcaatttggtcc 37560339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 46796104 - 46796066
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  46796104 attttggtcccctaactataaagtgtctcaatttggtcc 46796066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 96763 - 96702
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtta 61  Q
    ||||| ||||||||||||||||| |||||||| || ||||| ||||||||||| ||||||||    
T  96763 tttcactttggtcccctaactataaagtgtcttaaattggtcccttatgtcttttgtcgtta 96702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 1273509 - 1273473
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1273509 tttggtcccctaactataaagtgtctcaatttggtcc 1273473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5688719 - 5688679
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  5688719 tttcaatttggtcccctaactataaagtgtctcaatttggt 5688679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6616293 - 6616233
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtt 60  Q
    ||||| ||||||||||||||||| ||||||||||| ||||| |||||| | ||||||||||    
T  6616293 tttcactttggtcccctaactataaagtgtctcaaattggtcccttatatattctgtcgtt 6616233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 44128416 - 44128372
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcctt 45  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||    
T  44128416 tttcaatttggtcccctaactataaagtgtctcaatttagtcctt 44128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 44305061 - 44305018
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||    
T  44305061 tttcaatttggtcccctaactacaaagtgtctcaatttggtcct 44305018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 44690937 - 44690862
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||| || ||||||| || ||||||||||| || ||||||||||| |||  |||||||| ||||||||    
T  44690937 tttcattttggttccataactataaaatgtctcaatttagtcccttatgtcttttgttattacctcttttggtcct 44690862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 56000321 - 56000364
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    |||||||||| |||||||||||| |||||||||||||| |||||    
T  56000321 tttcattttgatcccctaactataaagtgtctcaatttagtcct 56000364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15786986 - 15787028
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    |||||||||| |||||||||||| || ||||||||||||||||    
T  15786986 tttcattttgttcccctaactataaactgtctcaatttggtcc 15787028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37559032 - 37559074
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  37559032 tttcaatttggtcccctaactataaaatgtctcaatttggtcc 37559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40143688 - 40143726
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  40143688 tttcattttagtcccctaactataaagtgtctcaatttg 40143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47668679 - 47668637
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||    
T  47668679 tttcactttggtcccctaactataaagtgtctcaaattggtcc 47668637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11113776 - 11113817
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||| ||||| ||||||| ||||||||||||||||||    
T  11113776 tttcattttagtcccttaactataaagtgtctcaatttggtc 11113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30682754 - 30682795
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||| ||||||| |||||||| |||||||||    
T  30682754 tttcattttggtcccttaactataaagtgtcttaatttggtc 30682795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31711126 - 31711167
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||  ||||||| ||||||||||||||||||    
T  31711126 tttcattttggtcctttaactataaagtgtctcaatttggtc 31711167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43894139 - 43894180
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||| ||||||||||||||||| || |||||||||||||||    
T  43894139 tttcagtttggtcccctaactataaaatgtctcaatttggtc 43894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 48207799 - 48207758
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||    
T  48207799 tttcattttggtctcctaattataaagtgtctcaatttggtc 48207758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39590975 - 39591035
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgtt 60  Q
    ||||| ||||||||||||||||| |||||||||||  |||| ||||||| | |||||||||    
T  39590975 tttcactttggtcccctaactataaagtgtctcaaactggtcccttatgccatctgtcgtt 39591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52981232 - 52981176
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgt 56  Q
    |||||||||||||||| |||||| |||||| ||||  |||| |||||||||||||||    
T  52981232 tttcattttggtccccaaactatcaagtgtttcaaactggtcccttatgtcttctgt 52981176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25956 - 26030
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||  ||| |||||||    
T  25956 tttcattttggtcccctaactataaagtgtctcaatttggtcccttatgtcttttgtcgttatatcttttggtcc 26030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26998 - 26924
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcc 74  Q
    ||||||||||||||||||||||| ||||||||||||||| | ||| ||||||| || |||||||||| |||||||    
T  26998 tttcattttggtcccctaactataaagtgtctcaatttgatccctaatgtcttttgccgttacctcttttggtcc 26924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 73068 - 72993
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||| |||||||||||||| || ||||||| ||| |||||| |||||||||||||||||||||||| ||||||||    
T  73068 tttcactttggtcccctaacaataaagtgtcacaaattggtctcttatgtcttctgtcgttacctcttttggtcct 72993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 5208 - 5278
Alignment:
Q  6 ttttggtcccctaactatgaagtgtctcaatttggtc-cttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||||||||||||| ||||||||||||||||||  | ||||||| || |||||||||| ||||||||    
T  5208 ttttggtcccctaactataaagtgtctcaatttggtctataatgtcttttgccgttacctcttttggtcct 5278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 458538 - 458467
Alignment:
Q  5 attttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||||||  |||| |||| ||||||||    
T  458538 attttggtcccctaattataaagtgtcttaatttggtcccttatgtcttctgctgttatctcttttggtcct 458467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 1135 - 1066
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttctgtcgttacctctattggtcct 75  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||||| | | ||||||||| ||| ||||    
T  1135 tttggtcctctaactataaagtgtctcaatttggtcccttatgtcttttattgttacctcttttgctcct 1066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 56782 - 56739
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcct 44  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||||    
T  56782 tttcactttggtcccctaattataaagtgtctcaatttggtcct 56739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2347 - 2305
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||    
T  2347 tttcattttggtcccctaattataaagtgtttcaatttggtcc 2305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1245 - 1286
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtc 42  Q
    ||||||||||||||||||| ||| |||| |||||||||||||    
T  1245 tttcattttggtcccctaattataaagtctctcaatttggtc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39983 - 39941
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||    
T  39983 tttcactttggtcccctaagtataaagtgtctcaatttggtcc 39941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23440 - 23482
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||| ||||||||||||||||| || ||||||||||||||||    
T  23440 tttcagtttggtcccctaactataaaatgtctcaatttggtcc 23482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24897 - 24844
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt-ccttatgtcttc 53  Q
    ||||| ||||||||||||| ||| |||||| |||||||||| ||||||||||||    
T  24897 tttcagtttggtcccctaattataaagtgtttcaatttggtcccttatgtcttc 24844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 96194 - 96232
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttg 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  96194 tttcaatttggtcccctaactataaagtgtctcaatttg 96232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 597 - 557
Alignment:
Q  1 tttcattttggtcccctaactatgaagtgtctcaatttggt 41  Q
    ||||| || |||||||||||||| |||||||||||||||||    
T  597 tttcaattaggtcccctaactataaagtgtctcaatttggt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 704 - 668
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  704 tttggtcccctaactataaagtgtctcaatttagtcc 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 570 - 606
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  570 tttggtcccctaactataaagtgtctcaatttagtcc 606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 9554 - 9518
Alignment:
Q  7 tttggtcccctaactatgaagtgtctcaatttggtcc 43  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  9554 tttggtcccctaactataaagtgtctcaatttagtcc 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University