View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1250_high_40 (Length: 356)

Name: NF1250_high_40
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1250_high_40
NF1250_high_40
[»] scaffold0470 (1 HSPs)
scaffold0470 (30-347)||(4936-5251)
[»] chr8 (16 HSPs)
chr8 (30-347)||(6615650-6615965)
chr8 (146-344)||(6750186-6750377)
chr8 (146-344)||(6756977-6757168)
chr8 (198-344)||(6659139-6659286)
chr8 (198-344)||(6739541-6739688)
chr8 (211-309)||(13841860-13841957)
chr8 (228-310)||(2627203-2627285)
chr8 (231-291)||(6189682-6189742)
chr8 (30-121)||(6750409-6750497)
chr8 (30-121)||(6757200-6757288)
chr8 (225-312)||(34194586-34194673)
chr8 (226-307)||(108220-108301)
chr8 (231-308)||(13964451-13964528)
chr8 (212-307)||(8793755-8793850)
chr8 (238-310)||(17871792-17871864)
chr8 (227-255)||(37036153-37036181)
[»] chr7 (7 HSPs)
chr7 (54-347)||(19058755-19059048)
chr7 (228-310)||(42117489-42117571)
chr7 (211-312)||(37491285-37491386)
chr7 (228-312)||(46578294-46578378)
chr7 (211-310)||(7456435-7456534)
chr7 (225-305)||(16777918-16777998)
chr7 (208-312)||(48392893-48392996)
[»] chr2 (15 HSPs)
chr2 (194-308)||(43542913-43543027)
chr2 (225-312)||(43341155-43341242)
chr2 (225-312)||(42579045-42579132)
chr2 (231-310)||(44274574-44274652)
chr2 (211-269)||(45472422-45472480)
chr2 (225-310)||(22450956-22451041)
chr2 (195-343)||(40691131-40691280)
chr2 (229-269)||(14952795-14952835)
chr2 (225-312)||(10041569-10041656)
chr2 (230-285)||(40205121-40205176)
chr2 (225-312)||(43341156-43341243)
chr2 (228-310)||(41153144-41153226)
chr2 (228-308)||(5559460-5559540)
chr2 (211-251)||(33407406-33407446)
chr2 (224-312)||(37182843-37182931)
[»] chr1 (12 HSPs)
chr1 (214-307)||(48010148-48010241)
chr1 (238-310)||(15290617-15290689)
chr1 (195-291)||(22340925-22341021)
chr1 (211-310)||(28038839-28038938)
chr1 (211-312)||(38834623-38834724)
chr1 (224-308)||(20711652-20711736)
chr1 (213-312)||(27549059-27549158)
chr1 (211-310)||(39940516-39940614)
chr1 (238-312)||(45239018-45239092)
chr1 (228-269)||(47446701-47446742)
chr1 (230-310)||(29673833-29673913)
chr1 (230-310)||(50155333-50155413)
[»] chr5 (11 HSPs)
chr5 (227-308)||(12922403-12922484)
chr5 (228-310)||(7613387-7613469)
chr5 (211-310)||(13654538-13654636)
chr5 (225-308)||(30489127-30489210)
chr5 (228-310)||(13391560-13391642)
chr5 (228-269)||(7313860-7313901)
chr5 (211-308)||(40100099-40100195)
chr5 (211-310)||(5110548-5110647)
chr5 (257-310)||(32911499-32911552)
chr5 (228-308)||(1098657-1098736)
chr5 (224-308)||(18475327-18475411)
[»] chr3 (7 HSPs)
chr3 (225-312)||(7672720-7672807)
chr3 (195-312)||(473765-473880)
chr3 (231-307)||(4980305-4980381)
chr3 (225-254)||(50603551-50603580)
chr3 (231-307)||(27707210-27707286)
chr3 (228-308)||(29241511-29241591)
chr3 (211-271)||(52168438-52168498)
[»] chr6 (2 HSPs)
chr6 (229-310)||(16120995-16121076)
chr6 (200-291)||(33122903-33122994)
[»] chr4 (17 HSPs)
chr4 (195-291)||(5924495-5924591)
chr4 (231-307)||(19596030-19596106)
chr4 (225-312)||(25856037-25856124)
chr4 (225-269)||(2254023-2254067)
chr4 (212-312)||(5656526-5656626)
chr4 (225-289)||(19754241-19754305)
chr4 (225-289)||(19785501-19785565)
chr4 (228-291)||(2401069-2401132)
chr4 (229-308)||(46543609-46543688)
chr4 (212-254)||(13051808-13051850)
chr4 (225-271)||(17657975-17658021)
chr4 (228-290)||(42832243-42832305)
chr4 (225-310)||(4386352-4386436)
chr4 (201-310)||(46462382-46462491)
chr4 (225-254)||(48860556-48860585)
chr4 (201-249)||(134586-134634)
chr4 (225-289)||(42013172-42013236)
[»] scaffold1266 (1 HSPs)
scaffold1266 (228-310)||(159-241)
[»] scaffold0635 (1 HSPs)
scaffold0635 (225-312)||(5414-5501)
[»] scaffold0263 (1 HSPs)
scaffold0263 (228-310)||(19822-19904)


Alignment Details
Target: scaffold0470 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 30 - 347
Target Start/End: Complemental strand, 5251 - 4936
Alignment:
Q  30 aaaaagctaggaactttctgccaatattttaacgcatgaaatcgaacattaaactctccaatagacacgtacatattacacagtaaccacttacgctaca 129  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  5251 aaaaagctaggaactttctgccaatattttaacacatgaaatcgaactttaaactctccaatagac--gtacatattacacaataaccacttacgctaca 5154  T
Q  130 tcaaaactgtggcttttgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactactccgatcttaattataagataatatttac 229  Q
     || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5153 ccagaactgtggcttctgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactgctccgatcttaattataagataatatttac 5054  T
Q  230 tttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaactatctcttgtagttga 329  Q
    | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||| |||||| |||||| |||||||    
T  5053 tatttagattcattcaataaatgatacatttagtctatattaagaactaaatacattaattaccgaatgaacctaaaaggtaactttctcttatagttga 4954  T
Q  330 aaccgaagggagtattat 347  Q
    |||| |||||||||||||    
T  4953 aaccaaagggagtattat 4936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 30 - 347
Target Start/End: Complemental strand, 6615965 - 6615650
Alignment:
Q  30 aaaaagctaggaactttctgccaatattttaacgcatgaaatcgaacattaaactctccaatagacacgtacatattacacagtaaccacttacgctaca 129  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  6615965 aaaaagctaggaactttctgccaatattttaacacatgaaatcgaactttaaactctccaatagac--gtacatattacacaataaccacttacgctaca 6615868  T
Q  130 tcaaaactgtggcttttgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactactccgatcttaattataagataatatttac 229  Q
     || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6615867 ccagaactgtggcttctgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactgctccgatcttaattataagataatatttac 6615768  T
Q  230 tttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaactatctcttgtagttga 329  Q
    | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||| |||||| |||||| |||||||    
T  6615767 tatttagattcattcaataaatgatacatttagtctatattaagaactaaatacattaattaccgaatgaacctaaaaggtaactttctcttatagttga 6615668  T
Q  330 aaccgaagggagtattat 347  Q
    |||| |||||||||||||    
T  6615667 aaccaaagggagtattat 6615650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 344
Target Start/End: Complemental strand, 6750377 - 6750186
Alignment:
Q  146 tgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactactccgatcttaattataagataatatttactttttaaattcattca 245  Q
    ||||| ||||||||||||||||||||||||| |||||||        ||||||||| || ||||||||| || |||| |||||||||||| ||||||||     
T  6750377 tgccatttattccaccatatcaaatgaggtaaccaaaca--------agtactactgcggtcttaattaaaaaataacatttactttttagattcattct 6750286  T
Q  246 ataaatgatacatttagtctatattaagaactaaatacatcattta-ccaaatgaatctaaaaagtaactatctcttgtagttgaaaccgaagggagtat 344  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||   ||||||| ||||||| ||||| |||||| ||||| ||||| ||||||||||    
T  6750285 ataaatgatacatttagtatatattaagaactaaatacattatttattgaaatgaacctaaaaactaactttctcttatagtttaaacctaagggagtat 6750186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 344
Target Start/End: Complemental strand, 6757168 - 6756977
Alignment:
Q  146 tgccacttattccaccatatcaaatgaggtagccaaacacaaacaaaagtactactccgatcttaattataagataatatttactttttaaattcattca 245  Q
    ||||| ||||||||||||||||||||||||| |||||||        ||||||||| || ||||||||| || |||| |||||||||||| ||||||||     
T  6757168 tgccatttattccaccatatcaaatgaggtaaccaaaca--------agtactactgcggtcttaattaaaaaataacatttactttttagattcattct 6757077  T
Q  246 ataaatgatacatttagtctatattaagaactaaatacatcattta-ccaaatgaatctaaaaagtaactatctcttgtagttgaaaccgaagggagtat 344  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||   ||||||| ||||||| ||||| |||||| ||||| ||||| ||||||||||    
T  6757076 ataaatgatacatttagtatatattaagaactaaatacattatttattgaaatgaacctaaaaactaactttctcttatagtttaaacctaagggagtat 6756977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 344
Target Start/End: Complemental strand, 6659286 - 6659139
Alignment:
Q  198 tactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttac-caaa 296  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||  |||    
T  6659286 tactccggtcttaattataaaataacatttactttttagattcattctataaatgatacatttagtccatattatgaactaaatacattatttactgaaa 6659187  T
Q  297 tgaatctaaaaagtaactatctcttgtagttgaaaccgaagggagtat 344  Q
    |||| ||||||| ||||| |||||| ||||| ||||| ||||||||||    
T  6659186 tgaacctaaaaactaactttctcttatagtttaaacctaagggagtat 6659139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 344
Target Start/End: Complemental strand, 6739688 - 6739541
Alignment:
Q  198 tactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttac-caaa 296  Q
    ||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||  |||    
T  6739688 tactccggtcttaattataaaataacatttactttttagattcattctataaatgatacatttagtccatattatgaactaaatacattatttactgaaa 6739589  T
Q  297 tgaatctaaaaagtaactatctcttgtagttgaaaccgaagggagtat 344  Q
    |||| ||||||| ||||| |||||| ||||| ||||| ||||||||||    
T  6739588 tgaacctaaaaactaactttctcttatagtttaaacctaagggagtat 6739541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 211 - 309
Target Start/End: Original strand, 13841860 - 13841957
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaag 309  Q
    ||||||||  || |||||||||||||||||||||||||||||||  |||||||||| | ||  ||||| ||||||||||||   |||||| ||||||||    
T  13841860 attataagcaaaaatttactttttaaattcattcaataaatgatgtatttagtctaca-tataaactacatacatcatttattgaatgaacctaaaaag 13841957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 2627285 - 2627203
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||| ||||||||||||||| |  |||||||||||||||   || |||||||| |||||   ||||||||||||||||    
T  2627285 actttttaagttcattcaataaatggtgtatttagtctatattattgaccaaatacattatttattgaatgaatctaaaaagt 2627203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 6189742 - 6189682
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattta 291  Q
    ||||| ||||||||||||||||||  |||||||||||||||   || ||||||||||||||    
T  6189742 ttttagattcattcaataaatgatgtatttagtctatattattgaccaaatacatcattta 6189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 6750497 - 6750409
Alignment:
Q  30 aaaaagctaggaactttctgccaatattttaacgcatgaaatcgaacattaaactctccaatagacacgtacatattacacagtaaccactt 121  Q
    |||||||||||||||||| |||||||||||||| |||| |||| ||| |||||| |  ||||||   | ||||||||||||| |||||||||    
T  6750497 aaaaagctaggaactttccgccaatattttaacacatggaatc-aactttaaacccaacaatag--tcttacatattacacactaaccactt 6750409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 6757288 - 6757200
Alignment:
Q  30 aaaaagctaggaactttctgccaatattttaacgcatgaaatcgaacattaaactctccaatagacacgtacatattacacagtaaccactt 121  Q
    |||||||||||||||||| |||||||||||||| |||| |||| ||| |||||| |  ||||||   | ||||||||||||| |||||||||    
T  6757288 aaaaagctaggaactttccgccaatattttaacacatggaatc-aactttaaacccaacaatag--tcttacatattacacactaaccactt 6757200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 34194586 - 34194673
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||||||| ||||||||||| ||||||  || | ||| |||||| |||||| |||||||||| |   |||||| |||||||||||    
T  34194586 tttactttttagattcattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaacctaaaaagtaa 34194673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 307
Target Start/End: Original strand, 108220 - 108301
Alignment:
Q  226 ttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    ||||||||||  |||||| |||| |||||| |||| ||||||||  ||| | |||||||| | ||| |||||||||||||||    
T  108220 ttactttttaggttcattgaatatatgatatatttggtctatatatagaccaaaatacattaattatcaaatgaatctaaaa 108301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 308
Target Start/End: Original strand, 13964451 - 13964528
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    ||||||||||||||||||||||||  || | ||||||||||   || |  ||||||||||||  ||||||||||||||    
T  13964451 ttttaaattcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaatctaaaaa 13964528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 212 - 307
Target Start/End: Complemental strand, 8793850 - 8793755
Alignment:
Q  212 ttataagataatattt-actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    |||||||| ||||||| |||||||  |||||||  |||||||||  |||||||||||||||   || |||||||||| ||||  |||||||||||||    
T  8793850 ttataaga-aatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaa 8793755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 310
Target Start/End: Complemental strand, 17871864 - 17871792
Alignment:
Q  238 ttcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||| ||||||||  |||||||||||||||   || ||||||||||||||   |||||| |||||||||    
T  17871864 ttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttaatgaatgaacctaaaaagt 17871792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 255
Target Start/End: Complemental strand, 37036181 - 37036153
Alignment:
Q  227 tactttttaaattcattcaataaatgata 255  Q
    |||||||||||||||||||||||||||||    
T  37036181 tactttttaaattcattcaataaatgata 37036153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 54 - 347
Target Start/End: Original strand, 19058755 - 19059048
Alignment:
Q  54 tattttaacgcatgaaatcgaacattaaactctccaatagacacgtacatattacacagtaaccacttacgctacatcaaaactgtggcttttgccactt 153  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||  ||| ||||||||||| |||||||||||||||| || |||||| | || ||||||||    
T  19058755 tattttaacacatgaaatcgaactttaaactctccaataaac--gtatatattacacagcaaccacttacgctacaccagaactgtagtttctgccactt 19058852  T
Q  154 attccaccatatcaaatgaggtagccaaacacaaacaaa--agtactactccgatcttaattataagataatatttactttttaaattcattcaataaat 251  Q
    ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19058853 attgcaccatatcaaatgaggtagccaaacacaaacaaattagtactactccgatcttaattataagataatatttactttttagattcattcaataaat 19058952  T
Q  252 gatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaactatctcttgtagttgaaaccgaagggagtattat 347  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  19058953 gatacatttagtctatattaagaactaaatacatcatttactaaatgaacttaaaaagtaactatctcttatagttgaaaccgaagggagtattat 19059048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 42117489 - 42117571
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  ||||| |||||||||||  ||||||||||||||| | |||| ||||||||||||   |||||| |||||||||    
T  42117489 actttttaggttcatccaataaatgatgtatttagtctatattagggactagatacatcatttattgaatgaacctaaaaagt 42117571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 37491285 - 37491386
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  || |||||||||||| ||| ||| ||||||||||  || |||||||||| |   || | ||||||||||||  |||||||||||||||||    
T  37491285 attataagcaaaaatttactttttagatttattaaataaatgatgtatgtagtctatataagtgaccatatacatcatttattaaatgaatctaaaaagt 37491384  T
Q  311 aa 312  Q
    ||    
T  37491385 aa 37491386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Original strand, 46578294 - 46578378
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||||||||||||||||| ||||||  || | || ||||||| |||||| |||||||||| |   |||||| |||||||||||    
T  46578294 actttttaaattcattcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaatgaacctaaaaagtaa 46578378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 7456435 - 7456534
Alignment:
Q  211 attataagataatattt-actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaag 309  Q
    ||||||||| ||||||| |||||||| |||||||  |||||||||  || ||||||||||| | ||| | |||||| | ||||  |||||||||||||||    
T  7456435 attataaga-aatatttgactttttagattcattgtataaatgatgtatctagtctatatttacaacaagatacattaattactcaatgaatctaaaaag 7456533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 16777918 - 16777998
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaa 305  Q
    |||| |||||| ||||||| | ||||||||  || ||||||||| |||  |||| ||||||||||||  ||||||||||||    
T  16777918 tttaatttttagattcatttattaaatgatgtatgtagtctataataaagactacatacatcatttaataaatgaatctaa 16777998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 312
Target Start/End: Complemental strand, 48392996 - 48392893
Alignment:
Q  208 ttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    |||||||||||  ||| |||||||||||| |||||||||| ||||||  || | || ||||||| |||  | |||||||| | |  ||||||||||||||    
T  48392996 ttaattataagcaaat-tttactttttaagttcattcaattaatgatgtatgtggtatatattatgaatcacatacatcactaattaaatgaatctaaaa 48392898  T
Q  308 agtaa 312  Q
    |||||    
T  48392897 agtaa 48392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 194 - 308
Target Start/End: Original strand, 43542913 - 43543027
Alignment:
Q  194 gtactactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttacc 293  Q
    |||||||||||||||  ||||||||| ||  || |||||||| |||||||||||||||||| ||| |||| |||||||||||| | ||||||||||||      
T  43542913 gtactactccgatctctattataagagaaagttcactttttagattcattcaataaatgatgcatctagtttatattaagaacgagatacatcatttatt 43543012  T
Q  294 aaatgaatctaaaaa 308  Q
     |||||| |||||||    
T  43543013 gaatgaacctaaaaa 43543027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 43341155 - 43341242
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||||||| |||||||||||||||||| ||| | || |||| || |||||| ||| ||||||||  |||||||||||||||||||    
T  43341155 tttactttttagattcattcaataaatgatgcatgtggtttataatatgaactacatatatcatttattaaatgaatctaaaaagtaa 43341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 42579045 - 42579132
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||||||||||||||| ||| ||||||  || ||||| |||||| |||| | |||||||||| |   ||||||||||||||||||    
T  42579045 tttactttttaaattcatttaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaa 42579132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 44274574 - 44274652
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||| ||||||||||||||||||| || ||||||||||  || |||| ||||||||||||   ||||||||||||||||    
T  44274574 ttttagattcattcaataaatgatatatgtagtctatatacag-actacatacatcatttattgaatgaatctaaaaagt 44274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 45472422 - 45472480
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatat 269  Q
    ||||||||  || |||||||||||||||||||||||||||||||  || ||||||||||    
T  45472422 attataagtaaaaatttactttttaaattcattcaataaatgatgtatgtagtctatat 45472480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 22450956 - 22451041
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||| || ||||||||||||||||||  || || ||||||||| ||| || |||||||||| |   ||||||||||||||||    
T  22450956 tttactttatagattcattcaataaatgatgtatctactctatattaggaattagatacatcattgaatgaatgaatctaaaaagt 22451041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 343
Target Start/End: Original strand, 40691131 - 40691280
Alignment:
Q  195 tactactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttacca 294  Q
    |||||||| ||||||| |||||| | ||  || |||||||| || ||||||||||||||   || ||||||||||||  ||||| ||||||||||||       
T  40691131 tactactctgatcttatttataaaagaaagttaactttttagatccattcaataaatgacgtatctagtctatattagaaactagatacatcatttattg 40691230  T
Q  295 aatgaatctaaaaag-taactatctcttgtagttgaaaccgaagggagta 343  Q
    ||| ||||| ||||| ||||| |||||| ||  ||| || ||||||||||    
T  40691231 aataaatctgaaaagttaactttctcttataaatgagacagaagggagta 40691280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 14952795 - 14952835
Alignment:
Q  229 ctttttaaattcattcaataaatgatacatttagtctatat 269  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  14952795 ctttttaaattcattcaataaatgatgcatgtagtctatat 14952835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 10041656 - 10041569
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||||||||| |||||||||| ||||||  || | ||||||||||  ||| | |||||||||| |  |||||||||||||| ||||    
T  10041656 tttactttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaa 10041569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 285
Target Start/End: Original strand, 40205121 - 40205176
Alignment:
Q  230 tttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacat 285  Q
    ||||| |||||||| ||||||  ||| ||||||| |||||||||||||||||||||    
T  40205121 ttttttaattcatttaataaacaatatatttagtttatattaagaactaaatacat 40205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 43341243 - 43341156
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||||||| ||||||| ||||||||||| || ||||  ||||||  ||| | || |||||||||   ||||||||||||||||||    
T  43341243 tttactttttagattcatttaataaatgatatatgtagttcatattataaaccacatgcatcatttattgaatgaatctaaaaagtaa 43341156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 41153144 - 41153226
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||  |||||||  |||||||||  |||| ||||||||||  ||| |||||||||| ||||  ||||||||||||||||    
T  41153144 acttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagt 41153226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 5559540 - 5559460
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    |||||||| ||||||||| ||||| ||  ||||||||||| |||   || ||||||| ||||||  |||||||||||||||    
T  5559540 actttttatattcattcattaaattatgtatttagtctatgttattgacaaaatacaacatttaataaatgaatctaaaaa 5559460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 33407406 - 33407446
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaat 251  Q
    ||||||||| || ||||||||||||| ||||||||||||||    
T  33407406 attataagagaaaatttactttttaagttcattcaataaat 33407446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 37182931 - 37182843
Alignment:
Q  224 atttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||| ||||||||||||||| ||||||||  || | ||||||| |||   ||| ||||||||||||   ||||||||||||| ||||    
T  37182931 atttacattttaaattcattcattaaatgatgtatgtggtctataataaaggctatatacatcatttaattaatgaatctaaaatgtaa 37182843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 48010148 - 48010241
Alignment:
Q  214 ataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    |||||||||  ||||| ||||||||| ||||||||||| ||| ||||  ||||||||||||| ||||||||| |||||  ||||||||||||||    
T  48010148 ataagataaagtttacattttaaatttattcaataaataatatattttatctatattaagaattaaatacattatttattaaatgaatctaaaa 48010241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 310
Target Start/End: Original strand, 15290617 - 15290689
Alignment:
Q  238 ttcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||| ||||||||  |||||||||||||||   || ||||||||||||||  |||||||||||||||||    
T  15290617 ttcattcattaaatgatgtatttagtctatattattgaccaaatacatcatttattaaatgaatctaaaaagt 15290689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 22340925 - 22341021
Alignment:
Q  195 tactactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattta 291  Q
    |||||||||| | | |||||||||||||  || |||||||| | ||||| ||||||||||  ||  ||||||||||| |||||| ||||||||||||    
T  22340925 tactactccggtttcaattataagataaagttaactttttagactcattgaataaatgatgtatcaagtctatattaggaactagatacatcattta 22341021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 28038839 - 28038938
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  || ||| |||||||| ||||||||| |||||| |  |||| ||| ||| ||  ||||||||||||||||||  |||||||||||||||||    
T  28038839 attataagcaaaaattaactttttagattcattcattaaatgttgtatttggtcaataatataaactaaatacatcatttaataaatgaatctaaaaagt 28038938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 312
Target Start/End: Original strand, 38834623 - 38834724
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  || ||||| |||||| ||||||| ||||||||||  || |||||||||| ||  || | ||||||||||||   ||||||||||||||||    
T  38834623 attataagcaaaaatttattttttagattcattaaataaatgatgtatatagtctatataaatgaccatatacatcatttattgaatgaatctaaaaagt 38834722  T
Q  311 aa 312  Q
    ||    
T  38834723 aa 38834724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 20711736 - 20711652
Alignment:
Q  224 atttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    |||||||||||||| ||||||||||||| ||  || || | |||||||  ||||||||||||||||||  |||| || |||||||    
T  20711736 atttactttttaaactcattcaataaataatgtatctaatatatattagaaactaaatacatcatttaataaatcaacctaaaaa 20711652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 27549059 - 27549158
Alignment:
Q  213 tataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||| ||| |||||||||||| |||||||||| ||||||  || | ||| |||||| |||| | |||||||||| |   |||||| |||||||||||    
T  27549059 tataagaaaatttttactttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaa 27549158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 39940614 - 39940516
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  || |||||||||||| ||||||||||||||| ||  || ||||||||| ||  ||| | ||||||||||||  ||||||| |||||||||    
T  39940614 attataagtaaaaatttactttttagattcattcaataaataatgtatgtagtctata-tataaaccatatacatcatttattaaatgaacctaaaaagt 39940516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 312
Target Start/End: Complemental strand, 45239092 - 45239018
Alignment:
Q  238 ttcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||||||| ||||||  || | |||||||||| |||| | |||||||||| |  |||||||||||||||||||    
T  45239092 ttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaatctaaaaagtaa 45239018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 47446742 - 47446701
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatat 269  Q
    |||||||||||||||||||||||||||  || ||||||||||    
T  47446742 actttttaaattcattcaataaatgatgtatgtagtctatat 47446701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 310
Target Start/End: Complemental strand, 29673913 - 29673833
Alignment:
Q  230 tttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||| ||||||||| | ||||||  || |||||||||||| |||| | ||||||| || | | ||||||||||||||||    
T  29673913 tttttagattcattcatttaatgatgtatgtagtctatattatgaacaacatacatcgttaaacgaatgaatctaaaaagt 29673833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 310
Target Start/End: Original strand, 50155333 - 50155413
Alignment:
Q  230 tttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||| ||||||||  |||||||||  |||| ||||||||||   || |||||||||| ||||  ||||||||||||||||    
T  50155333 ttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagt 50155413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 12922484 - 12922403
Alignment:
Q  227 tactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||  ||  ||||||||||||||   ||||||| ||||||    
T  12922484 tactttttaaattcattcaataaatgatatatttggtctatattattaaacaaatacatcatttattgaatgaatataaaaa 12922403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 7613387 - 7613469
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||| |||||||| ||||||    |||||||||||||||  ||| ||||||||||||||  |||||||||||||||||    
T  7613387 actttttaagttcattcattaaatgcagtatttagtctatattattaaccaaatacatcatttattaaatgaatctaaaaagt 7613469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 310
Target Start/End: Complemental strand, 13654636 - 13654538
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  || ||| |||||||||||||||||||||||||||  |||||||||||| || | || | ||||||||||||   |||||| |||||||||    
T  13654636 attataagcaaaaattcactttttaaattcattcaataaatgatgtatttagtctata-tatggaccacatacatcatttattgaatgaacctaaaaagt 13654538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 30489210 - 30489127
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    |||| |||||||||||||||||| ||||||| || | |||||||||| |||||| |||||| ||| |  ||||||| |||||||    
T  30489210 tttattttttaaattcattcaattaatgatatatgtggtctatattatgaactatatacataattaattaaatgaacctaaaaa 30489127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 13391642 - 13391560
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||  |||||||||||||| ||  |||||||||||||||   || ||||||||||||||   ||||||||||||||||    
T  13391642 actttttaggttcattcaataaattatgtatttagtctatattattgaccaaatacatcatttattgaatgaatctaaaaagt 13391560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 269
Target Start/End: Original strand, 7313860 - 7313901
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatat 269  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  7313860 actttttaaattcattcaataaatgatatatgtagtctatat 7313901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 308
Target Start/End: Original strand, 40100099 - 40100195
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    ||||||||  || ||| |||||||||||||||| ||||||||||   | | ||||||| || |||||| |||||||||||||  ||||||||||||||    
T  40100099 attataagcaaaaattgactttttaaattcatttaataaatgatgtgtgtggtctata-tatgaactacatacatcatttactgaatgaatctaaaaa 40100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 310
Target Start/End: Original strand, 5110548 - 5110647
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||| ||  || |||||||| ||||||||||||||| ||| || || |||||||||  ||  ||||||||||||||   |||||| |||||||||    
T  5110548 attataagagaaagttcactttttagattcattcaataaataatatatataatctatattagaaatcaaatacatcatttattgaatgaacctaaaaagt 5110647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 32911552 - 32911499
Alignment:
Q  257 atttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||||||||||   |||||||||||||||||  ||||||| |||||||||    
T  32911552 atttagtctatattatagactaaatacatcatttaataaatgaacctaaaaagt 32911499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 1098657 - 1098736
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    |||||||| ||||||||||||||||||  || | ||||||||  || |||| |||||| |||||  |||||||||||||||    
T  1098657 actttttagattcattcaataaatgatgtatgtggtctatatatag-actacatacattatttattaaatgaatctaaaaa 1098736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 18475411 - 18475327
Alignment:
Q  224 atttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    ||||||||||||||||||||  || ||||||  || |  | ||||||| || ||| ||||||||||||  |||||||||||||||    
T  18475411 atttactttttaaattcatttgatgaatgatgtatctgatttatattaggagctagatacatcatttattaaatgaatctaaaaa 18475327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 7672807 - 7672720
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    ||||||||||| ||||||||||| ||||||  || |||||||||||| |||||| ||| |||||| |   ||||||||||||||||||    
T  7672807 tttactttttagattcattcaattaatgatttatgtagtctatattatgaactagatatatcattaattgaatgaatctaaaaagtaa 7672720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 312
Target Start/End: Complemental strand, 473880 - 473765
Alignment:
Q  195 tactactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttacca 294  Q
    ||||||||||||||  ||||||||| |||  ||| |||||| ||| ||||  ||||||||| | ||  |||||||||||||||| |||||| ||||||      
T  473880 tactactccgatctctattataagagaat--ttattttttagatttattcggtaaatgatatacttgatctatattaagaactagatacattatttactc 473783  T
Q  295 aatgaatctaaaaagtaa 312  Q
    ||||||  ||||||||||    
T  473782 aatgaacataaaaagtaa 473765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 4980305 - 4980381
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    ||||| ||||||||||||||||||| || | ||||||| |||  |||| ||||||||||||   |||||||||||||    
T  4980305 ttttagattcattcaataaatgatatatgttgtctataataaagactacatacatcatttattgaatgaatctaaaa 4980381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 254
Target Start/End: Original strand, 50603551 - 50603580
Alignment:
Q  225 tttactttttaaattcattcaataaatgat 254  Q
    ||||||||||||||||||||||||||||||    
T  50603551 tttactttttaaattcattcaataaatgat 50603580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 27707210 - 27707286
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    ||||||||||||||||||||||||| || | ||||| | |||  || | ||||||||||||   |||||||||||||    
T  27707210 ttttaaattcattcaataaatgatatatattgtctacaataaagaccacatacatcatttattgaatgaatctaaaa 27707286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 29241591 - 29241511
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    |||||||| ||||||||||||||||||  |||| ||||||||||   |  |||| |||||||||  ||||||| |||||||    
T  29241591 actttttagattcattcaataaatgatgtatttggtctatattactgatcaaatgcatcatttattaaatgaacctaaaaa 29241511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 52168498 - 52168438
Alignment:
Q  211 attataagataatatttactttttaaattcattcaataaatgatacatttagtctatatta 271  Q
    ||||||||| || |||||||||| | ||||||||||||||||||  ||||| | |||||||    
T  52168498 attataagagaaaatttacttttaagattcattcaataaatgatgtatttaatatatatta 52168438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 310
Target Start/End: Original strand, 16120995 - 16121076
Alignment:
Q  229 ctttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||||||||||||||||||||  | || ||||||||||   || ||||||||||||||   ||||||||||||||||    
T  16120995 ctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaatctaaaaagt 16121076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 33122994 - 33122903
Alignment:
Q  200 ctccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattta 291  Q
    |||||||||||| | ||||| | | || |||||||| ||||||| |||||||||| ||| | ||| ||||||  ||| ||||||||||||||    
T  33122994 ctccgatcttaaatgtaagaaatttttcactttttagattcatttaataaatgatgcatgtggtccatattataaaccaaatacatcattta 33122903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 5924495 - 5924591
Alignment:
Q  195 tactactccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattta 291  Q
    |||||||  ||||||  |||||||||||  || | |||||||||||||||||||||| ||  || || |||||||||||||||| |||||| |||||    
T  5924495 tactactatgatctttgttataagataaagttaattttttaaattcattcaataaataatgtatctaatctatattaagaactacatacattattta 5924591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 19596106 - 19596030
Alignment:
Q  231 ttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaa 307  Q
    ||||||||||||||||||||||||| || |  |||||||||| ||  ||||||||||||||  ||||||| ||||||    
T  19596106 ttttaaattcattcaataaatgatatatatgatctatattaaaaatcaaatacatcatttattaaatgaacctaaaa 19596030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 25856124 - 25856037
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||||||||  |||||||||| ||||||  || | |||||||||| |||| | |||||||||| |  |||||||||||||||||||    
T  25856124 tttactttttaggttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaatctaaaaagtaa 25856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Complemental strand, 2254067 - 2254023
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatat 269  Q
    |||| |||||||||||||||||||||||||| || ||||||||||    
T  2254067 tttattttttaaattcattcaataaatgatatatgtagtctatat 2254023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 312
Target Start/End: Complemental strand, 5656626 - 5656526
Alignment:
Q  212 ttataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagta 311  Q
    |||||||| || ||| || ||||| ||| ||||||||||||||  || | ||||| ||| |||||||||||||||||| |   ||||||||||||| |||    
T  5656626 ttataagagaaaattaacattttagattaattcaataaatgatgtatctggtctacattgagaactaaatacatcattaatttaatgaatctaaaatgta 5656527  T
Q  312 a 312  Q
    |    
T  5656526 a 5656526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 19754241 - 19754305
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatt 289  Q
    ||||||||||| ||||||||||| ||||||| || | ||| |||||| |||||| ||||||||||    
T  19754241 tttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcatt 19754305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 289
Target Start/End: Complemental strand, 19785565 - 19785501
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatt 289  Q
    ||||||||||| ||||||||||| ||||||| || | ||| |||||| |||||| ||||||||||    
T  19785565 tttactttttagattcattcaattaatgatatatgtggtccatattatgaactacatacatcatt 19785501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 291
Target Start/End: Original strand, 2401069 - 2401132
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattta 291  Q
    |||||||||||||||||||||||||||  |||| ||| ||| ||   |||||||||||||||||    
T  2401069 actttttaaattcattcaataaatgatgtatttggtcaataatatagactaaatacatcattta 2401132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 46543609 - 46543688
Alignment:
Q  229 ctttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaa 308  Q
    ||||||||||| ||||||| ||| ||  |||| ||| |||||| || ||| ||||||||||||  |||||||||||||||    
T  46543609 ctttttaaatttattcaatgaataatgtatttggtcaatattatgagctatatacatcatttattaaatgaatctaaaaa 46543688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 13051850 - 13051808
Alignment:
Q  212 ttataagataatatttactttttaaattcattcaataaatgat 254  Q
    |||||||| || |||||||||||||||||||| ||||||||||    
T  13051850 ttataagagaaaatttactttttaaattcattaaataaatgat 13051808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 17658021 - 17657975
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatatta 271  Q
    |||| |||||| ||||||||||||||||||| || ||||||||||||    
T  17658021 tttattttttagattcattcaataaatgatatatgtagtctatatta 17657975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 42832305 - 42832243
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcattt 290  Q
    ||||||||| ||||||||| ||||||   ||||||| ||||||| |||||| |||||||||||    
T  42832305 actttttaatttcattcaacaaatgactgatttagtttatattaggaactagatacatcattt 42832243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 4386436 - 4386352
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    ||||||||||| ||||||||||||||||||  || |||| |||||  || || | ||||||||||||  |||| ||||||||||||    
T  4386436 tttactttttagattcattcaataaatgatctatgtagtttatatatag-accacatacatcatttaataaattaatctaaaaagt 4386352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 310
Target Start/End: Original strand, 46462382 - 46462491
Alignment:
Q  201 tccgatcttaattataagataatatttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaa 300  Q
    ||||||||||||||||||  | | || |||||||| ||||||| ||||||||||  || | || |||| |||  |||| ||||||||||||   ||||||    
T  46462382 tccgatcttaattataagcaacttttcactttttagattcattaaataaatgatgtatatggtttataataaagactacatacatcatttattcaatgaa 46462481  T
Q  301 tctaaaaagt 310  Q
     |||||||||    
T  46462482 cctaaaaagt 46462491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 254
Target Start/End: Original strand, 48860556 - 48860585
Alignment:
Q  225 tttactttttaaattcattcaataaatgat 254  Q
    ||||||||||||||||||||||||||||||    
T  48860556 tttactttttaaattcattcaataaatgat 48860585  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 134634 - 134586
Alignment:
Q  201 tccgatcttaattataagataatatttactttttaaattcattcaataa 249  Q
    ||||||||||||||||||| ||  ||||||||||| |||||||| ||||    
T  134634 tccgatcttaattataagaaaaactttactttttatattcattcgataa 134586  T

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Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 289
Target Start/End: Original strand, 42013172 - 42013236
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatt 289  Q
    ||||||||||||||||||||||| ||||||  || | ||||||||||  ||| | ||||||||||    
T  42013172 tttactttttaaattcattcaattaatgatgtatgtggtctatattataaaccacatacatcatt 42013236  T

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Target: scaffold1266 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 241 - 159
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||| ||||||||||||||||||  || | ||||||| || |||| | |||||| |||||  |||||||||||||||||    
T  241 actttttagattcattcaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaaagt 159  T

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Target: scaffold0635 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 5414 - 5501
Alignment:
Q  225 tttactttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagtaa 312  Q
    |||||||||||| |||||||||| ||||||  || | ||||||||||  ||| | |||||||||| |  |||||||||||||| ||||    
T  5414 tttactttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaa 5501  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 310
Target Start/End: Original strand, 19822 - 19904
Alignment:
Q  228 actttttaaattcattcaataaatgatacatttagtctatattaagaactaaatacatcatttaccaaatgaatctaaaaagt 310  Q
    |||||||| ||||||| ||||||||||  || | ||||||| || |||| | |||||| |||||  |||||||||||||||||    
T  19822 actttttagattcattaaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaaagt 19904  T

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