View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250_high_59 (Length: 287)
Name: NF1250_high_59
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250_high_59 |
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Alignment Details
Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 30 - 281
Target Start/End: Complemental strand, 1911755 - 1911500
Alignment:
| Q |
30 |
gttatttgttaaacccatattctaatgaacttgtatattatattaaatcaaaaagtctaagcatatatatgtgtcaaaatggaccatgaataagcatatg |
129 |
Q |
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| T |
1911755 |
gttatttgttaaacccatattttattgaacttgtatattatattaaaccaaaaagtctaagcatatatatgtgtcaaaatgctccatgaataagcatatg |
1911656 |
T |
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| Q |
130 |
aaaatacaatgcgtcatatctaacttatacacatata----tattttttatataacttagattatagacctcacatgcaagttgtgtgacttatgagaca |
225 |
Q |
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| T |
1911655 |
aaaatacaatgcgtcatatctaacttatacacagatataagtattttttatataacttagattatagacctcacatgcaagttgtgtgacttatgagaca |
1911556 |
T |
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| Q |
226 |
taccaaccaagcaaaagaaagattctcacttcattgttttccccccttcatctcac |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
1911555 |
taccaaccaagcaaaagaaagattctcacttcattgttttccccccttcatgtcac |
1911500 |
T |
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