View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250_low_118 (Length: 224)
Name: NF1250_low_118
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250_low_118 |
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Alignment Details
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 55329562 - 55329434
Alignment:
| Q |
1 |
atgggataagcaatgcggctgaaagtatggagaggcatagcagaatcaacaagagcgacaattggaatgtgaagtttgaaagcctcgtcaataacagaag |
100 |
Q |
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| T |
55329562 |
atgggataagcaatgcggctgaaagtatggagaggcatagcagaatcaacaagagcgacaattggaatgtgaagtttgaaagcctcgtcaataacagaag |
55329463 |
T |
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| Q |
101 |
acttgctctcggtatcgacaatgacgatg |
129 |
Q |
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|||||||||| |||||||||||||||||| |
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| T |
55329462 |
acttgctctcagtatcgacaatgacgatg |
55329434 |
T |
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