View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1250_low_121 (Length: 222)

Name: NF1250_low_121
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1250_low_121
NF1250_low_121
[»] chr8 (25 HSPs)
chr8 (42-175)||(32983943-32984076)
chr8 (7-50)||(32984261-32984304)
chr8 (172-221)||(33730633-33730682)
chr8 (175-221)||(26196312-26196358)
chr8 (180-221)||(2379270-2379311)
chr8 (180-221)||(10378439-10378480)
chr8 (180-221)||(25248174-25248215)
chr8 (180-221)||(41981609-41981650)
chr8 (178-221)||(2276053-2276096)
chr8 (179-222)||(6366126-6366169)
chr8 (178-221)||(9013824-9013867)
chr8 (178-221)||(9303572-9303615)
chr8 (178-221)||(12033071-12033114)
chr8 (182-221)||(32114390-32114429)
chr8 (178-221)||(32984075-32984118)
chr8 (179-221)||(4447294-4447336)
chr8 (178-220)||(31336236-31336278)
chr8 (180-221)||(10646264-10646305)
chr8 (176-221)||(17718718-17718763)
chr8 (181-222)||(41640054-41640095)
chr8 (180-221)||(41862361-41862402)
chr8 (177-222)||(45066589-45066634)
chr8 (177-221)||(33981660-33981704)
chr8 (177-221)||(37956562-37956606)
chr8 (177-221)||(41232087-41232131)
[»] chr4 (39 HSPs)
chr4 (174-221)||(36532824-36532871)
chr4 (179-221)||(31914338-31914380)
chr4 (179-221)||(43471694-43471736)
chr4 (180-221)||(31532135-31532176)
chr4 (180-221)||(41632007-41632048)
chr4 (180-221)||(55519968-55520009)
chr4 (177-221)||(34276688-34276732)
chr4 (177-221)||(41702456-41702500)
chr4 (177-221)||(43891058-43891102)
chr4 (181-221)||(53834055-53834095)
chr4 (182-221)||(397543-397582)
chr4 (178-221)||(3692208-3692251)
chr4 (178-221)||(19387686-19387729)
chr4 (178-221)||(22618512-22618555)
chr4 (178-221)||(29777255-29777298)
chr4 (178-221)||(31070072-31070115)
chr4 (174-221)||(32366654-32366701)
chr4 (178-221)||(38591805-38591848)
chr4 (174-221)||(42765836-42765883)
chr4 (178-221)||(50234141-50234184)
chr4 (179-221)||(3170767-3170809)
chr4 (180-222)||(15060289-15060331)
chr4 (179-221)||(39077686-39077728)
chr4 (180-222)||(42033315-42033357)
chr4 (180-222)||(44984901-44984943)
chr4 (179-221)||(52461493-52461535)
chr4 (180-221)||(9798606-9798647)
chr4 (180-221)||(9997931-9997972)
chr4 (180-221)||(26091258-26091299)
chr4 (180-221)||(34552449-34552490)
chr4 (180-221)||(45633779-45633820)
chr4 (180-221)||(54086549-54086590)
chr4 (180-221)||(54574940-54574981)
chr4 (180-221)||(54608103-54608144)
chr4 (177-221)||(1662258-1662302)
chr4 (181-221)||(6020069-6020109)
chr4 (178-222)||(20351840-20351884)
chr4 (181-221)||(33049022-33049062)
chr4 (177-221)||(48657959-48658003)
[»] chr3 (31 HSPs)
chr3 (179-222)||(27066977-27067020)
chr3 (179-222)||(35748310-35748353)
chr3 (172-221)||(30251493-30251542)
chr3 (178-221)||(43612045-43612088)
chr3 (175-221)||(47257934-47257980)
chr3 (178-222)||(7855112-7855156)
chr3 (177-221)||(33550464-33550508)
chr3 (177-221)||(47809593-47809637)
chr3 (177-221)||(52864630-52864674)
chr3 (177-221)||(55000175-55000219)
chr3 (178-221)||(38416722-38416765)
chr3 (174-221)||(42291983-42292030)
chr3 (178-221)||(49330178-49330221)
chr3 (179-221)||(25353684-25353726)
chr3 (180-222)||(37324681-37324723)
chr3 (180-222)||(43176738-43176780)
chr3 (179-221)||(48739232-48739274)
chr3 (179-220)||(177292-177333)
chr3 (180-221)||(22399237-22399278)
chr3 (180-221)||(24100423-24100464)
chr3 (180-221)||(28048392-28048433)
chr3 (176-221)||(32234394-32234439)
chr3 (180-221)||(34279721-34279762)
chr3 (180-221)||(38156632-38156673)
chr3 (180-221)||(40643941-40643982)
chr3 (180-221)||(44222970-44223011)
chr3 (176-221)||(51452747-51452791)
chr3 (180-221)||(52756067-52756108)
chr3 (177-221)||(7755304-7755348)
chr3 (177-221)||(25641776-25641820)
chr3 (178-222)||(35594261-35594305)
[»] chr7 (24 HSPs)
chr7 (179-221)||(30076526-30076568)
chr7 (176-221)||(46898012-46898057)
chr7 (177-221)||(35767616-35767660)
chr7 (178-221)||(26579715-26579758)
chr7 (179-221)||(35356030-35356072)
chr7 (180-221)||(27018258-27018299)
chr7 (180-221)||(33695821-33695862)
chr7 (176-221)||(46913253-46913298)
chr7 (180-221)||(47740331-47740372)
chr7 (178-221)||(17855570-17855613)
chr7 (178-221)||(35752032-35752075)
chr7 (178-221)||(36389498-36389541)
chr7 (179-222)||(37846015-37846058)
chr7 (184-222)||(41855189-41855228)
chr7 (175-221)||(33332930-33332976)
chr7 (175-221)||(44405490-44405536)
chr7 (180-221)||(25893917-25893958)
chr7 (176-221)||(35757016-35757061)
chr7 (180-221)||(43499627-43499668)
chr7 (174-221)||(2341655-2341703)
chr7 (181-221)||(33393459-33393499)
chr7 (181-221)||(33423276-33423316)
chr7 (177-221)||(39323738-39323782)
chr7 (177-221)||(49171359-49171403)
[»] chr1 (37 HSPs)
chr1 (180-222)||(7561528-7561570)
chr1 (178-221)||(4808786-4808829)
chr1 (180-221)||(2450635-2450676)
chr1 (180-221)||(47671727-47671768)
chr1 (177-221)||(4953182-4953226)
chr1 (177-221)||(23984896-23984940)
chr1 (177-221)||(24885642-24885686)
chr1 (178-221)||(10928197-10928240)
chr1 (178-221)||(23932507-23932550)
chr1 (175-222)||(26277317-26277364)
chr1 (178-221)||(26524887-26524930)
chr1 (178-221)||(31308142-31308185)
chr1 (178-221)||(33073341-33073384)
chr1 (179-222)||(38790196-38790239)
chr1 (178-221)||(44662111-44662154)
chr1 (178-221)||(48373636-48373679)
chr1 (179-221)||(5961266-5961308)
chr1 (175-221)||(17994946-17994992)
chr1 (180-222)||(26085398-26085440)
chr1 (180-222)||(46967041-46967083)
chr1 (176-222)||(52368012-52368058)
chr1 (180-221)||(2657433-2657474)
chr1 (180-221)||(3611277-3611318)
chr1 (176-221)||(5981311-5981356)
chr1 (180-221)||(25058829-25058870)
chr1 (180-221)||(27983603-27983644)
chr1 (176-221)||(31040850-31040895)
chr1 (180-221)||(33187464-33187505)
chr1 (180-221)||(36566471-36566512)
chr1 (180-221)||(41467632-41467673)
chr1 (180-221)||(41895164-41895205)
chr1 (180-221)||(45538294-45538335)
chr1 (180-221)||(46784564-46784605)
chr1 (180-221)||(49398988-49399029)
chr1 (177-221)||(2954985-2955029)
chr1 (177-221)||(6327545-6327589)
chr1 (178-222)||(38331857-38331901)
[»] chr6 (16 HSPs)
chr6 (180-221)||(18101495-18101536)
chr6 (178-221)||(19415531-19415574)
chr6 (175-221)||(34527857-34527903)
chr6 (177-221)||(3291138-3291182)
chr6 (177-221)||(5882647-5882691)
chr6 (178-221)||(26377202-26377245)
chr6 (179-221)||(11988973-11989015)
chr6 (179-221)||(15965563-15965605)
chr6 (179-221)||(24168232-24168274)
chr6 (180-221)||(22551061-22551102)
chr6 (180-221)||(28947228-28947269)
chr6 (180-221)||(28948845-28948886)
chr6 (180-221)||(33452572-33452613)
chr6 (184-220)||(18661771-18661807)
chr6 (173-221)||(22341781-22341829)
chr6 (178-222)||(34262359-34262403)
[»] chr2 (24 HSPs)
chr2 (180-221)||(2914138-2914179)
chr2 (176-222)||(2324885-2324931)
chr2 (180-221)||(5726269-5726310)
chr2 (180-221)||(38997241-38997282)
chr2 (178-221)||(2688727-2688770)
chr2 (178-221)||(4034732-4034775)
chr2 (178-221)||(7892686-7892729)
chr2 (178-221)||(12730190-12730233)
chr2 (178-221)||(13543622-13543665)
chr2 (178-221)||(17600976-17601019)
chr2 (178-221)||(27024555-27024598)
chr2 (178-221)||(34249394-34249437)
chr2 (179-221)||(27651033-27651075)
chr2 (179-221)||(30545950-30545992)
chr2 (177-222)||(145410-145455)
chr2 (180-221)||(746606-746647)
chr2 (180-221)||(11185112-11185153)
chr2 (180-221)||(29687170-29687211)
chr2 (180-221)||(35158050-35158091)
chr2 (180-221)||(39301197-39301238)
chr2 (180-221)||(45371130-45371171)
chr2 (177-221)||(1091948-1091992)
chr2 (177-221)||(6594455-6594499)
chr2 (181-221)||(39103176-39103216)
[»] scaffold0092 (1 HSPs)
scaffold0092 (178-221)||(39554-39597)
[»] chr5 (17 HSPs)
chr5 (180-222)||(40278858-40278900)
chr5 (179-221)||(43262182-43262224)
chr5 (180-221)||(2484292-2484333)
chr5 (177-222)||(5497402-5497447)
chr5 (180-221)||(12648938-12648979)
chr5 (180-221)||(27501055-27501096)
chr5 (180-221)||(34451391-34451432)
chr5 (177-221)||(28424792-28424836)
chr5 (178-222)||(29789293-29789337)
chr5 (178-221)||(13957800-13957843)
chr5 (180-222)||(13504742-13504784)
chr5 (180-222)||(14972107-14972149)
chr5 (179-221)||(42247790-42247832)
chr5 (180-221)||(5185113-5185154)
chr5 (181-222)||(9424593-9424634)
chr5 (180-221)||(19295860-19295901)
chr5 (180-221)||(24253523-24253564)
[»] scaffold0007 (2 HSPs)
scaffold0007 (178-222)||(278148-278192)
scaffold0007 (179-221)||(176795-176837)
[»] scaffold0076 (1 HSPs)
scaffold0076 (178-221)||(13760-13803)
[»] scaffold0721 (1 HSPs)
scaffold0721 (180-222)||(7220-7262)
[»] scaffold0429 (1 HSPs)
scaffold0429 (180-222)||(4596-4638)
[»] scaffold0949 (1 HSPs)
scaffold0949 (180-221)||(2010-2051)


Alignment Details
Target: chr8 (Bit Score: 122; Significance: 9e-63; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 42 - 175
Target Start/End: Complemental strand, 32984076 - 32983943
Alignment:
Q  42 ttgaaacaaacagtgggttggtcgagagaacaaaagaaataggaagaagcggaaataacgttgttgagaggttgtcttgtttgtatgcgctaatggggtc 141  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32984076 ttgaaacaaagagtgggttggtcgagagaacaaaagaaataggaagaggcggaaataacgttgttgagaggttgtcttgtttgtatgcgctaatggggtc 32983977  T
Q  142 cactcaaccaaataacttaatttaattacgttta 175  Q
    |||||||||||||||||||||||||||| |||||    
T  32983976 cactcaaccaaataacttaatttaattaagttta 32983943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 32984304 - 32984261
Alignment:
Q  7 gtagaagctagcgatcgagtgaagtgagaataagattgaaacaa 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32984304 gtagaagctagcgatcgagtgaagtgagaataagattgaaacaa 32984261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 33730633 - 33730682
Alignment:
Q  172 tttataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  33730633 tttagaaaggtgacaactagggtatccatggaagaatggtgggtaattta 33730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 26196312 - 26196358
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||||    
T  26196312 ataaaggtgacaactaggatattcatggaaaaatggtgggtaattta 26196358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2379311 - 2379270
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||| |||||||||||||||||||    
T  2379311 ggtgacaactaggctatccatgaaagaatgatgggtaattta 2379270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 10378480 - 10378439
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  10378480 ggtgacaactaggatacccatggaagaatggtgggtaattta 10378439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 25248215 - 25248174
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||| |||| ||||||||||||||||||||||||||||    
T  25248215 ggtgacaattagggtatccatggaagaatgatgggtaattta 25248174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 41981650 - 41981609
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  41981650 ggtgacaactagggtatccatggaagaatggtgggtaattta 41981609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 2276096 - 2276053
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||  || |||||||||||||||||||||||||    
T  2276096 aaggtgacaactagtctacccatggaagaatgatgggtaattta 2276053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 6366169 - 6366126
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||    
T  6366169 aggtgacaactagggtatccatgaaagaatggtgggtaatttat 6366126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 9013867 - 9013824
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  9013867 aaggtgacaactagggtacccatggaagaatggtgggtaattta 9013824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 9303572 - 9303615
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  9303572 aaggtgacaactagggtacccatggaagaatggtgggtaattta 9303615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 12033114 - 12033071
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  12033114 aaggtgacaactagggtacccatggaagaatggtgggtaattta 12033071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 32114429 - 32114390
Alignment:
Q  182 tgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  32114429 tgacaactaggatacccatggaagaatggtgggtaattta 32114390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 32984075 - 32984118
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  32984075 aaggtgacaactagggtacccatggaagaatggtgggtaattta 32984118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 4447294 - 4447336
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  4447294 aggtgacaactagggtacccatggaagaatggtgggtaattta 4447336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 31336278 - 31336236
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattt 220  Q
    ||||||||||||||| || ||||||||||||| ||||||||||    
T  31336278 aaggtgacaactagggtacccatggaagaatggtgggtaattt 31336236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 10646305 - 10646264
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  10646305 ggtgacaactagggtacccatggaagaatggtgggtaattta 10646264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 17718718 - 17718763
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||| ||||| || ||||||||||||| |||||||||||    
T  17718718 taaaggtgacagctagggtacccatggaagaatggtgggtaattta 17718763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 41640095 - 41640054
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||| |||| ||||||||||| ||||||||||||    
T  41640095 gtgacaactagggtatctatggaagaatggtgggtaatttat 41640054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 41862402 - 41862361
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||| ||||||| ||||||||||||| |||||||||||    
T  41862402 ggtgacaattaggatacccatggaagaatggtgggtaattta 41862361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 45066589 - 45066634
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||| || |||| || ||||||||||||||||||||||||||    
T  45066589 aaaggtgagaattagggtacccatggaagaatgatgggtaatttat 45066634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 33981660 - 33981704
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || | ||||||||||| |||||||||||    
T  33981660 aaaggtgacaactagggtacctatggaagaatggtgggtaattta 33981704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 37956606 - 37956562
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| |||||||| || |||| |||||||||||    
T  37956606 aaaggtgacaactagggtatccatgaaataatggtgggtaattta 37956562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 41232131 - 41232087
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| |||||||||| ||||  |||||||||||    
T  41232131 aaaggtgacaactagggtatccatggaggaatagtgggtaattta 41232087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 36532824 - 36532871
Alignment:
Q  174 tataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||    
T  36532824 tataaaggtgacaactaggatacccatggaagaatggtgggtaattta 36532871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 31914380 - 31914338
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  31914380 aggtgacaactagggtacccatggaagaatgatgggtaattta 31914338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 43471694 - 43471736
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| |||||||||||||||| |||||||||||    
T  43471694 aggtgacaactagggtatccatggaagaatggtgggtaattta 43471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 31532135 - 31532176
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  31532135 ggtgacaactagggtacccatggaagaatgatgggtaattta 31532176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41632007 - 41632048
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  41632007 ggtgacaactaggatacccatgaaagaatgatgggtaattta 41632048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 55520009 - 55519968
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  55520009 ggtgacaactaggatacccatggaagaatggtgggtaattta 55519968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 34276732 - 34276688
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  34276732 aaaggtgacaactagggtacccatggaagaatggtgggtaattta 34276688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 41702456 - 41702500
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||    
T  41702456 aaagatgacaactagggtatccatggaagaatggtgggtaattta 41702500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 43891102 - 43891058
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| | |||||||||||||||| |||||||||||    
T  43891102 aaaggtgacaactatggtatccatggaagaatggtgggtaattta 43891058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 53834055 - 53834095
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  53834055 gtgacaactagggtatccatggaagaatggtgggtaattta 53834095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Complemental strand, 397582 - 397543
Alignment:
Q  182 tgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||| |||||||||||||||| |||||||||||    
T  397582 tgacaactagggtatccatggaagaatggtgggtaattta 397543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 3692208 - 3692251
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  3692208 aaggtgacaactagggtacccatggaagaatggtgggtaattta 3692251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 19387686 - 19387729
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  19387686 aaggtgacaactagggtacccatggaagaatggtgggtaattta 19387729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 22618512 - 22618555
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  22618512 aaggtgacaactagggtacccatggaagaatggtgggtaattta 22618555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 29777255 - 29777298
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||| |||| |||||||||||||||| |||||||||||    
T  29777255 aaggtgacaattagggtatccatggaagaatggtgggtaattta 29777298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 31070072 - 31070115
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  31070072 aaggtgacaactagggtacccatggaagaatggtgggtaattta 31070115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 32366654 - 32366701
Alignment:
Q  174 tataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||| |||||||||||| || ||||||||||||| |||||||||||    
T  32366654 tataaaagtgacaactagggtacccatggaagaatggtgggtaattta 32366701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 38591848 - 38591805
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  38591848 aaggtgacaactagggtacccatggaagaatggtgggtaattta 38591805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 42765836 - 42765883
Alignment:
Q  174 tataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| | || ||||||||||||| |||||||||||    
T  42765836 tataaaggtgacaactaaggtacccatggaagaatggtgggtaattta 42765883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 50234184 - 50234141
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||    
T  50234184 aaggtgacaactagggtatccatagaagaatggtgggtaattta 50234141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 3170809 - 3170767
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||  |||||||||||||||| |||||||||||    
T  3170809 aggtgacaactagagtatccatggaagaatggtgggtaattta 3170767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 15060289 - 15060331
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||| ||||||||||||||||||||    
T  15060289 ggtgacaactaggctacccatgaaagaatgatgggtaatttat 15060331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 39077728 - 39077686
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  39077728 aggtgacaactagggtacccatggaagaatgttgggtaattta 39077686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 42033357 - 42033315
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||||||||||| ||||||||||||    
T  42033357 ggtgacaactagggtacccatggaagaatggtgggtaatttat 42033315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 44984943 - 44984901
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||||||||||| ||||||||||||    
T  44984943 ggtgacaactagggtacccatggaagaatggtgggtaatttat 44984901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 52461535 - 52461493
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  52461535 aggtggcaactaggctatccatgaaagaatgatgggtaattta 52461493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 9798647 - 9798606
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  9798647 ggtgacaactagggtacccatggaagaatggtgggtaattta 9798606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 9997931 - 9997972
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  9997931 ggtgacaactagggtacccatggaagaatggtgggtaattta 9997972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 26091258 - 26091299
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  26091258 ggtgacaactagggtacccatggaagaatggtgggtaattta 26091299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 34552490 - 34552449
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  34552490 ggtgacaactaggctacccatgaaagaatgatgggtaattta 34552449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 45633779 - 45633820
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  45633779 ggtgacaactaggctacccatgaaagaatgatgggtaattta 45633820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 54086590 - 54086549
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  54086590 ggtgacaactagggtacccatggaagaatggtgggtaattta 54086549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 54574940 - 54574981
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  54574940 ggtgacaactagggtacccatggaagaatggtgggtaattta 54574981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 54608144 - 54608103
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||| |||||| |||||||||||||||||||| |||||||    
T  54608144 ggtgactactagggtatccatggaagaatgatggataattta 54608103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 1662258 - 1662302
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || | |||||||||||||| ||||||||    
T  1662258 aaaggtgacaactagggtacctatggaagaatgatgagtaattta 1662302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 6020109 - 6020069
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| || ||||||||||||| |||||||||||    
T  6020109 gtgacaactagggtacccatggaagaatggtgggtaattta 6020069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 20351840 - 20351884
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||  || ||||| ||||||||||||||||||||    
T  20351840 aaggtgacaactagactacccatgaaagaatgatgggtaatttat 20351884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 33049062 - 33049022
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| || ||||||||||||| |||||||||||    
T  33049062 gtgacaactagggtacccatggaagaatggtgggtaattta 33049022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 48658003 - 48657959
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| ||| |||||||    
T  48658003 aaaggtgacaactagggtacccatggaagaatggtggataattta 48657959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 27066977 - 27067020
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  27066977 aggtgacaactagggtatccatggaagaatgatgggtaatttat 27067020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 35748310 - 35748353
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  35748310 aggtgacaactagggtatccatggaagaatgatgggtaatttat 35748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 30251493 - 30251542
Alignment:
Q  172 tttataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  30251493 tttatcaaggtgacaactagggtatccatggaagaatggtgggtaattta 30251542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 43612045 - 43612088
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  43612045 aaggtgacaactagggtacccatggaagaatgatgggtaattta 43612088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 47257980 - 47257934
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||    
T  47257980 ataaaggtgacaactagggtacccatggaagaatggtgggtaattta 47257934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 7855112 - 7855156
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||    
T  7855112 aaggtgacaactagggtacccatggaagaatggtgggtaatttat 7855156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 33550464 - 33550508
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||    
T  33550464 aaaggtgacaactagggtattcatggaagaatggtgggtaattta 33550508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 47809593 - 47809637
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  47809593 aaaggtgacaactagggtacccatggaagaatggtgggtaattta 47809637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 52864674 - 52864630
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  52864674 aaaggtgacaactagggtacccatggaagaatggtgggtaattta 52864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 55000175 - 55000219
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||| |||||||||||||||||||    
T  55000175 aaaggtgacaactaggctacccatgaaagaatgatgggtaattta 55000219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 38416722 - 38416765
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  38416722 aaggtgacaactagggtacccatggaagaatggtgggtaattta 38416765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 42292030 - 42291983
Alignment:
Q  174 tataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||||| || | ||||||||||| |||||||||||    
T  42292030 tataaaggtgacaactagggtacctatggaagaatggtgggtaattta 42291983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 49330221 - 49330178
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || |||||||||||||||| ||||||||    
T  49330221 aaggtgacaactagggtacccatggaagaatgatgagtaattta 49330178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 25353726 - 25353684
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  25353726 aggtgacaactagggtacccatggaagaatggtgggtaattta 25353684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 37324723 - 37324681
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||||||||||| ||||||||||||    
T  37324723 ggtgacaactagggtacccatggaagaatggtgggtaatttat 37324681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 43176738 - 43176780
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || |||||||| |||||||||||||||||    
T  43176738 ggtgacaactagggtacccatggaaaaatgatgggtaatttat 43176780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 48739232 - 48739274
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  48739232 aggtgacaactagggtacccatggaagaatggtgggtaattta 48739274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 177333 - 177292
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattt 220  Q
    |||||||||||||||||| ||||||| |||| ||||||||||    
T  177333 aggtgacaactaggatattcatggaaaaatggtgggtaattt 177292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 22399278 - 22399237
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  22399278 ggtgacaactagggtacccatggaagaatggtgggtaattta 22399237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 24100464 - 24100423
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  24100464 ggtgacaactagggtacccatggaagaatggtgggtaattta 24100423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 28048392 - 28048433
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  28048392 ggtgacaactagggtacccatggaagaatggtgggtaattta 28048433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 32234394 - 32234439
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| || ||||||||||||  |||||||||||    
T  32234394 taaaggtgacaactagggtacccatggaagaatagtgggtaattta 32234439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 34279721 - 34279762
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||| |||||||| |||||||| |||||||||||||||||||    
T  34279721 ggtggcaactaggctatccatgaaagaatgatgggtaattta 34279762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 38156632 - 38156673
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  38156632 ggtgacaactaggctacccatgaaagaatgatgggtaattta 38156673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 40643982 - 40643941
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  40643982 ggtgacaactagggtacccatggaagaatggtgggtaattta 40643941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 44223011 - 44222970
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  44223011 ggtgacaactagggtacccatggaagaatggtgggtaattta 44222970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 51452747 - 51452791
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| |||| || |||||||||||||||||||||||||    
T  51452747 taaaggtgacaattagggta-ccatggaagaatgatgggtaattta 51452791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 52756067 - 52756108
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  52756067 ggtgacaactaggctacccatgaaagaatgatgggtaattta 52756108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 7755304 - 7755348
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||| |||| || ||||||||||||||||||| |||||    
T  7755304 aaaggtgacaagtagggtacccatggaagaatgatgggttattta 7755348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 25641820 - 25641776
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||| |||||||| || ||||| |||||||||||||||||||    
T  25641820 aaaggtggcaactaggctacccatgaaagaatgatgggtaattta 25641776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 35594305 - 35594261
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||| ||||||||| || ||||||||||||| ||||||||||||    
T  35594305 aaggtaacaactagggtacccatggaagaatggtgggtaatttat 35594261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 30076526 - 30076568
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  30076526 aggtgacaactagggtatccatggaagaatgatgggtaattta 30076568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 46898012 - 46898057
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||    
T  46898012 taaaggtgacaactagggtatccatggaagaatggtgggtaattta 46898057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 35767660 - 35767616
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  35767660 aaaggtgacaactagggtatccatggaagaatggtgggtaattta 35767616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 26579715 - 26579758
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  26579715 aaggtgacaactagggtatccatggaagaatggtgggtaattta 26579758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 35356072 - 35356030
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| ||||||||||||| |||||||||||    
T  35356072 aggtgacaactaggatacccatggaagaatggtgggtaattta 35356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 27018299 - 27018258
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  27018299 ggtgacaactaggatacccatggaagaatggtgggtaattta 27018258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 33695821 - 33695862
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  33695821 ggtgacaactagggtatccatggaagaatggtgggtaattta 33695862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 46913298 - 46913253
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| || ||||||||||||| |||||||||||    
T  46913298 taaaggtgacaactagggtacccatggaagaatggtgggtaattta 46913253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 47740331 - 47740372
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  47740331 ggtgacaactagggtatccatggaagaatggtgggtaattta 47740372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 17855613 - 17855570
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  17855613 aaggtgacaactagggtacccatggaagaatggtgggtaattta 17855570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 35752032 - 35752075
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||| |||||||||||||||||||    
T  35752032 aaggtgacaactaggctacccatgaaagaatgatgggtaattta 35752075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 36389541 - 36389498
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  36389541 aaggtgacaactagggtacccatggaagaatggtgggtaattta 36389498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 37846015 - 37846058
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||| || ||||||||||||| ||||||||||||    
T  37846015 aggtgacaactagggtacccatggaagaatggtgggtaatttat 37846058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 222
Target Start/End: Complemental strand, 41855228 - 41855189
Alignment:
Q  184 acaactagga-tatccatggaagaatgatgggtaatttat 222  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  41855228 acaactaggagtatccatggaagaatgatgggtaatttat 41855189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 33332976 - 33332930
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||| || ||||| ||||||| |||||||||||    
T  33332976 ataaaggtgacaactagggtacccatgaaagaatggtgggtaattta 33332930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 44405536 - 44405490
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| ||| ||||||||||||| | |||||||||    
T  44405536 ataaaggtgacaactagaatacccatggaagaatggtaggtaattta 44405490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 25893917 - 25893958
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  25893917 ggtgacaactagggtacccatggaagaatggtgggtaattta 25893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 35757016 - 35757061
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| || ||||||||||||| || ||||||||    
T  35757016 taaaggtgacaactagggtacccatggaagaatggtgagtaattta 35757061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 43499668 - 43499627
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||| ||||||| |||||||||||||||| |||||||||||    
T  43499668 ggtgagaactagggtatccatggaagaatggtgggtaattta 43499627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 2341655 - 2341703
Alignment:
Q  174 tataaaggtgacaactaggatatcc-atggaagaatgatgggtaattta 221  Q
    ||||||||||||||||||| || || ||||||||||| |||||||||||    
T  2341655 tataaaggtgacaactagggtaccccatggaagaatggtgggtaattta 2341703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 33393499 - 33393459
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| || ||||||||||||| |||||||||||    
T  33393499 gtgacaactagggtacccatggaagaatggtgggtaattta 33393459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 33423276 - 33423316
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| || ||||||||||||| |||||||||||    
T  33423276 gtgacaactagggtacccatggaagaatggtgggtaattta 33423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 39323782 - 39323738
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||  |||| |||||||||||||||||||    
T  39323782 aaaggtgacaactaggctactcatgaaagaatgatgggtaattta 39323738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 49171359 - 49171403
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||  |||||||||||| |||||||||||    
T  49171359 aaaggtgacaactagggtactcatggaagaatggtgggtaattta 49171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 7561528 - 7561570
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  7561528 ggtgacaactagggtatccatggaagaatgatgggtaatttat 7561570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 4808829 - 4808786
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  4808829 aaggtgacaactagggtatccatggaagaatggtgggtaattta 4808786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2450676 - 2450635
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  2450676 ggtgacaactaggatacccatggaagaatgataggtaattta 2450635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 47671768 - 47671727
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  47671768 ggtgacaactagggtacccatggaagaatgatgggtaattta 47671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 4953226 - 4953182
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||    
T  4953226 aaaggtgacaattaggctatccatgaaagaatgatgggtaattta 4953182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 23984940 - 23984896
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  23984940 aaaggtgacaactagggtacccatggaagaatggtgggtaattta 23984896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 24885686 - 24885642
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||| |||||||||||| |||||||||||    
T  24885686 aaaggtgacaactagggtattcatggaagaatggtgggtaattta 24885642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 10928240 - 10928197
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  10928240 aaggtgacaactagggtattcatggaagaatggtgggtaattta 10928197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 23932507 - 23932550
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  23932507 aaggtgacaactagggtacccatggaagaatggtgggtaattta 23932550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 222
Target Start/End: Complemental strand, 26277364 - 26277317
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||| ||||||||||||| || ||||||||||||| ||||||||||||    
T  26277364 ataatggtgacaactagggtacccatggaagaatggtgggtaatttat 26277317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 26524887 - 26524930
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  26524887 aaggtgacaactagggtatccatggaagaatagtgggtaattta 26524930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 31308185 - 31308142
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  31308185 aaggtgacaactagggtacccatggaagaatggtgggtaattta 31308142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 33073384 - 33073341
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  33073384 aaggtgacaactagggtacccatggaagaatggtgggtaattta 33073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 38790196 - 38790239
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||| || ||||||||||||| ||||||||||||    
T  38790196 aggtgacaactagggtacccatggaagaatggtgggtaatttat 38790239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 44662154 - 44662111
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  44662154 aaggtgacaactagggtacccatggaagaatggtgggtaattta 44662111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 48373679 - 48373636
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| | |||||||||||||||| |||||||||||    
T  48373679 aaggtgacaactaaggtatccatggaagaatggtgggtaattta 48373636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 5961266 - 5961308
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || |||||||| ||||||||||||||||    
T  5961266 aggtgacaactagggtacccatggaaaaatgatgggtaattta 5961308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 17994946 - 17994992
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||| |||||||| || ||||||||||||| |||||||||||    
T  17994946 ataaaggtgccaactagggtacccatggaagaatggtgggtaattta 17994992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 26085398 - 26085440
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||||||||||| ||||||||||||    
T  26085398 ggtgacaactagggtacccatggaagaatggtgggtaatttat 26085440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 46967041 - 46967083
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||| ||||||||||||||||||||    
T  46967041 ggtgacaactagggtacccatgaaagaatgatgggtaatttat 46967083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 52368058 - 52368012
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||||| || | |||||| |||||||||||||||||    
T  52368058 taaaggtgacaactagggtacctatggaaaaatgatgggtaatttat 52368012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2657474 - 2657433
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  2657474 ggtgacaactaggctacccatgaaagaatgatgggtaattta 2657433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 3611318 - 3611277
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  3611318 ggtgacaactagggtacccatggaagaatggtgggtaattta 3611277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 5981356 - 5981311
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  5981356 taaaggtgacaactagggtacccatggaagaatggtggataattta 5981311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 25058870 - 25058829
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  25058870 ggtgacaactagggtacccatggaagaatggtgggtaattta 25058829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 27983603 - 27983644
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  27983603 ggtgacaactagggtacccatggaagaatggtgggtaattta 27983644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 31040895 - 31040850
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| || |||||||| |||| |||||||||||    
T  31040895 taaaggtgacaactagggtacccatggaataatggtgggtaattta 31040850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 33187505 - 33187464
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  33187505 ggtgacaactagggtacccatggaagaatggtgggtaattta 33187464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 36566512 - 36566471
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  36566512 ggtgacaactagggtacccatggaagaatggtgggtaattta 36566471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41467632 - 41467673
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  41467632 ggtgacaactaggctacccatgaaagaatgatgggtaattta 41467673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 41895164 - 41895205
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  41895164 ggtgacaactaggctacccatgaaagaatgatgggtaattta 41895205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 45538335 - 45538294
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  45538335 ggtgacaactagggtacccatggaagaatggtgggtaattta 45538294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 46784605 - 46784564
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||| |||| || |||||||||||||||||||||||||    
T  46784605 ggtgacaattagggtacccatggaagaatgatgggtaattta 46784564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 49398988 - 49399029
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||  |||||||||||    
T  49398988 ggtgacaactaggatacccatggaagaatagtgggtaattta 49399029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 2955029 - 2954985
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || |||||||| |||| |||||||||||    
T  2955029 aaaggtgacaactagggtacccatggaaaaatggtgggtaattta 2954985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 6327545 - 6327589
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||  |||||||||||    
T  6327545 aaaggtgacaactagggtacccatggaagaatagtgggtaattta 6327589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 38331857 - 38331901
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||  || ||||||||||||| ||||||||||||    
T  38331857 aaggtgacaactagagtacccatggaagaatggtgggtaatttat 38331901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 18101495 - 18101536
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  18101495 ggtgacaactaggatacccatggaagaatgatgggtaattta 18101536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 19415531 - 19415574
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  19415531 aaggtgacaactagggtacccatggaagaatgatgggtaattta 19415574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 34527857 - 34527903
Alignment:
Q  175 ataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||| || ||||||||||||| |||||||||||    
T  34527857 ataaaggtgacaactagggtacccatggaagaatggtgggtaattta 34527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 3291182 - 3291138
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||    
T  3291182 aaaggtgacaattaggctatccatgaaagaatgatgggtaattta 3291138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 5882691 - 5882647
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || ||||||||||||| |||||||||||    
T  5882691 aaaggtgacaactagggtacccatggaagaatggtgggtaattta 5882647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 26377202 - 26377245
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  26377202 aaggtgacaactagggtacccatggaagaatggtgggtaattta 26377245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 11988973 - 11989015
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  11988973 aggtgacaactagggtacccatggaagaatggtgggtaattta 11989015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 15965605 - 15965563
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||| |||||||||||||||||||    
T  15965605 aggtgacaactaggctacccatgaaagaatgatgggtaattta 15965563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 24168274 - 24168232
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  24168274 aggtgacaactagggtacccatggaagaatggtgggtaattta 24168232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 22551061 - 22551102
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  22551061 ggtgacaactagggtacccatggaagaatggtgggtaattta 22551102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 28947269 - 28947228
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  28947269 ggtgacaactagggtacccatggaagaatggtgggtaattta 28947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 28948845 - 28948886
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  28948845 ggtgacaactaggctacccatgaaagaatgatgggtaattta 28948886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 33452572 - 33452613
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| || ||||||||    
T  33452572 ggtgacaactaggatacccatggaagaatggtgagtaattta 33452613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 18661807 - 18661771
Alignment:
Q  184 acaactaggatatccatggaagaatgatgggtaattt 220  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  18661807 acaactaggctatccatgaaagaatgatgggtaattt 18661771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 22341781 - 22341829
Alignment:
Q  173 ttataaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||| ||||||||||||| | || ||||||||||||| |||||||||||    
T  22341781 ttattaaggtgacaactaaggtacccatggaagaatggtgggtaattta 22341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 34262403 - 34262359
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||| || |||||||| |||| ||||||||||||    
T  34262403 aaggtgacaactagggtacccatggaaaaatggtgggtaatttat 34262359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 2914138 - 2914179
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  2914138 ggtgacaactaggatatccatggaagaatggtgggtaattta 2914179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 176 - 222
Target Start/End: Original strand, 2324885 - 2324931
Alignment:
Q  176 taaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  2324885 taaaggtgacaactagggtattcatggaagaatggtgggtaatttat 2324931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 5726310 - 5726269
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  5726310 ggtgacaactagggtatccatggaagaatggtgggtaattta 5726269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 38997282 - 38997241
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  38997282 ggtgacaactagggtatccatggaagaatggtgggtaattta 38997241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 2688727 - 2688770
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||    
T  2688727 aaggtgacaactaggctatccatgaaagaatgatgagtaattta 2688770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 4034775 - 4034732
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  4034775 aaggtgacaactagggtacccatggaagaatggtgggtaattta 4034732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 7892686 - 7892729
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||    
T  7892686 aaggtgacaactagggtatctatggaagaatggtgggtaattta 7892729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 12730233 - 12730190
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||| |||||||| |||||||| |||||||||||||||||||    
T  12730233 aaggtggcaactaggctatccatgaaagaatgatgggtaattta 12730190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 13543622 - 13543665
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||| |||||||||||||||||||    
T  13543622 aaggtgacaactaggctacccatgaaagaatgatgggtaattta 13543665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 17601019 - 17600976
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  17601019 aaggtgacaactagggtacccatggaagaatggtgggtaattta 17600976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 27024598 - 27024555
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || |||||||||||| ||||||||||||    
T  27024598 aaggtgacaactagggtacccatggaagaataatgggtaattta 27024555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 34249437 - 34249394
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||| |||||||||||||||||||    
T  34249437 aaggtgacaactaggctacccatgaaagaatgatgggtaattta 34249394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 27651033 - 27651075
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || ||||||||||||| |||||||||||    
T  27651033 aggtgacaactagggtacccatggaagaatggtgggtaattta 27651075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 30545992 - 30545950
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| |||| ||||| |||||||||||||||||    
T  30545992 aggtgacaactagggtatctatggaggaatgatgggtaattta 30545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 145455 - 145410
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||| ||||||||||| || ||||| ||||||||||||||||||||    
T  145455 aaagttgacaactaggctacccatgaaagaatgatgggtaatttat 145410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 746647 - 746606
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  746647 ggtgacaactagggtacccatggaagaatggtgggtaattta 746606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 11185153 - 11185112
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  11185153 ggtgacaactagggtacccatggaagaatggtgggtaattta 11185112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 29687211 - 29687170
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  29687211 ggtgacaactaggctacccatgaaagaatgatgggtaattta 29687170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 35158050 - 35158091
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  35158050 ggtgacaactaggctacccatgaaagaatgatgggtaattta 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 39301197 - 39301238
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  39301197 ggtgacaactaggctatccatgaaagaatgatggataattta 39301238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 45371171 - 45371130
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  45371171 ggtgacaactagggtacccatggaagaatggtgggtaattta 45371130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 1091948 - 1091992
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || |||||||| |||| |||||||||||    
T  1091948 aaaggtgacaactagggtacccatggaaaaatggtgggtaattta 1091992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 6594455 - 6594499
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| || |||||||| |||| |||||||||||    
T  6594455 aaaggtgacaactagggtacccatggaaaaatggtgggtaattta 6594499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 39103216 - 39103176
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||| || ||||||||||||| |||||||||||    
T  39103216 gtgacaactagggtacccatggaagaatggtgggtaattta 39103176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 39554 - 39597
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  39554 aaggtgacaactagggtacccatggaagaatgatgggtaattta 39597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 40278858 - 40278900
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| ||| |||||||||||||||||||||||||    
T  40278858 ggtgacaactagggtattcatggaagaatgatgggtaatttat 40278900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 43262182 - 43262224
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  43262182 aggtgacaactagggtacccatggaagaatgatgggtaattta 43262224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 2484292 - 2484333
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| |||||||||||    
T  2484292 ggtgacaactaggatacccatggaagaatggtgggtaattta 2484333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 5497447 - 5497402
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||    
T  5497447 aaaggtgacaactaggctacccatgaaagaatgatgggtaatttat 5497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 12648979 - 12648938
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  12648979 ggtgacaactagggtatccatggaagaatggtgggtaattta 12648938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 27501055 - 27501096
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  27501055 ggtgacaactagggtacccatggaagaatgatgggtaattta 27501096  T

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Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 34451432 - 34451391
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  34451432 ggtgacaactagggtatccatggaagaatggtgggtaattta 34451391  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 28424792 - 28424836
Alignment:
Q  177 aaaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||  |||||||||||||||| |||||||||||    
T  28424792 aaaggtgacaactagagtatccatggaagaatggtgggtaattta 28424836  T

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Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 29789293 - 29789337
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||    
T  29789293 aaggtgacaactagggtacccatggaagaatggtgggtaatttat 29789337  T

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Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 13957843 - 13957800
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||| |||||||||||||||||||    
T  13957843 aaggtgacaactaggctacccatgaaagaatgatgggtaattta 13957800  T

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Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 13504742 - 13504784
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||    
T  13504742 ggtgacaactagggtatccatggaagaatggtggataatttat 13504784  T

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Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 14972149 - 14972107
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||| ||||||||||||||||||||    
T  14972149 ggtgacaactaggctacccatgaaagaatgatgggtaatttat 14972107  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 42247790 - 42247832
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||| |||||||| |||||||| |||||||||||||||||||    
T  42247790 aggtgtcaactaggctatccatgaaagaatgatgggtaattta 42247832  T

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Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 5185154 - 5185113
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    |||||||||||||||| ||||||||||||| || ||||||||    
T  5185154 ggtgacaactaggatacccatggaagaatggtgagtaattta 5185113  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 222
Target Start/End: Original strand, 9424593 - 9424634
Alignment:
Q  181 gtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    |||||||||||| || ||||| ||||||||||||||||||||    
T  9424593 gtgacaactaggctacccatgaaagaatgatgggtaatttat 9424634  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 19295901 - 19295860
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||| |||||||||||||||||||    
T  19295901 ggtgacaactaggctacccatgaaagaatgatgggtaattta 19295860  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 24253564 - 24253523
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  24253564 ggtgacaactagggtacccatggaagaatggtgggtaattta 24253523  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 278192 - 278148
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||||| || ||||||||||||| ||||||||||||    
T  278192 aaggtgacaactagggtacccatggaagaatggtgggtaatttat 278148  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 176837 - 176795
Alignment:
Q  179 aggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||||| |||| |||||||| |||||||||||    
T  176837 aggtgacaactaggatacccatagaagaatggtgggtaattta 176795  T

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Target: scaffold0076 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 13760 - 13803
Alignment:
Q  178 aaggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||||| || ||||||||||||| |||||||||||    
T  13760 aaggtgacaactagggtacccatggaagaatggtgggtaattta 13803  T

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Target: scaffold0721 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 7262 - 7220
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||| ||||||||||||||||||||    
T  7262 ggtgacaactaggctacccatgaaagaatgatgggtaatttat 7220  T

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Target: scaffold0429 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 222
Target Start/End: Original strand, 4596 - 4638
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaatttat 222  Q
    ||||||||||||| || ||||||||||||| ||||||||||||    
T  4596 ggtgacaactagggtacccatggaagaatggtgggtaatttat 4638  T

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Target: scaffold0949 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0949
Description:

Target: scaffold0949; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 2051 - 2010
Alignment:
Q  180 ggtgacaactaggatatccatggaagaatgatgggtaattta 221  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  2051 ggtgacaactagggtacccatggaagaatggtgggtaattta 2010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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