View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1250_low_141 (Length: 207)
Name: NF1250_low_141
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250_low_141 |
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Alignment Details
Target: chr4 (Bit Score: 133; Significance: 2e-69; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6265703 - 6265851
Alignment:
| Q |
1 |
ttatgaaatttgatttgtcgcagcgttaaaatattaatcacgacattgcagaaatcttaataaaataagttgaaatacctggcattggcaatactgaaac |
100 |
Q |
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| T |
6265703 |
ttatgaaatttaatttgtcgcagcgttaaaatattaatcacaaaattgcagaaatcttaataaaataatttgaaatacctggcattggcaatactgaaac |
6265802 |
T |
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| Q |
101 |
ttgtttctcaaaattttcactgctcgaatccttttcctcttcgacttca |
149 |
Q |
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| T |
6265803 |
ttgtttctcaaaattttcactgctcgaatccttttcctcttcgacttca |
6265851 |
T |
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