View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1250_low_147 (Length: 203)
Name: NF1250_low_147
Description: NF1250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1250_low_147 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34857232 - 34857323
Alignment:
| Q |
1 |
ttccacccccttctccttttgaagggcacaacagaggaaaaagttgtccaacatcatccagagaccgcgattctttaaatgtctatttattt |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34857232 |
ttccacccccttctccttttgaagggcacaacagaggaaaaagttgtccaacatcatccagagaccgcgattctttaaatgtctatttattt |
34857323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University